Pregenerated sensors for JMY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021690Ensembl transcript IDs: ENSMUST00000065537.9, ENSMUST00000220513.2
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTAAGAGAGGCAGAGAGAAGCAGACTGCTGCAGAGTGCCTGGCCTaGACAGCAAATCCTAGGCCAGCCAGGGCTACACAGCAGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: CKRGREKQTAAECLA*TANPRPARATQQGL Trigger: CAGGCCCTGCTGTGTAGCCCTGGCTGGCCTAGGATTTGCTGTGCAGGCCAGGCACTCTGCAGCAGTCTGCTTCTCTCTGCCTCTCTTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | GTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGCTGCAGAGTaGCTGGCCTGCACAGCAAATCCTAGGCCAGCCAGGGCTACACAG | + |
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Preference number: 1 (lower is better) Translates to: VHTCKRGREKQTAAE*LACTANPRPARATQ Trigger: CTGTGTAGCCCTGGCTGGCCTAGGATTTGCTGTGCAGGCCAGGCACTCTGCAGCAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR TCA 90 bp | AGTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTaGGAGGCTTTCGCTTCTGGGAAGATTCTGGGCAACGCCGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SDQEAMFLEENYGGH*EAFASGKILGNAGK Trigger: TTTCCCGGCGTTGCCCAGAATCTTCCCAGAAGCGAAAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR TCA 90 bp | CCAGGAGGCTTGTTCTCTCTGCAGTCGGGAACATTGCACTATCAATaGGAGGGACTGGACAGTAGTAACCTCCCGTTTGTGCTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: PGGLFSLQSGTLHYQ*EGLDSSNLPFVLPF Trigger: AAAAGGAAGCACAAACGGGAGGTTACTACTGTCCAGTCCCTCTCATTGATAGTGCAATGTTCCCGACTGCAGAGAGAACAAGCCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 90 bp | TGTTCTCTCTGCAGTCGGGAACATTGCACTATCAATGAGAGGGACTaGACAGTAGTAACCTCCCGTTTGTGCTTCCTTTTTCAAACCACT | + |
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Preference number: 1 (lower is better) Translates to: CSLCSREHCTINERD*TVVTSRLCFLFQTT Trigger: AGTGGTTTGAAAAAGGAAGCACAAACGGGAGGTTACTACTGTCCAGTCCCTCTCATTGATAGTGCAATGTTCCCGACTGCAGAGAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 90 bp | ATTAAAGAAACACATCTCTTAAAAGTGACCAGGAAGCCATGTTCCTaGAGGAAAACTATGGCGGGCATTGAGAGGCTTTCGCTTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: IKETHLLKVTRKPCS*RKTMAGIERLSLLG Trigger: TCCCAGAAGCGAAAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCACTTTTAAGAGATGTGTTTCTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | TTCCGTTTCTCATTAAACTACATATTATGGTCTCACACTTGGCAGTaGATACAGTACAGAGAGAGATTCAACAAGGCAGTGGGGACTGTG | + |
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Preference number: 1 (lower is better) Translates to: FRFSLNYILWSHTWQ*IQYRERFNKAVGTV Trigger: CACAGTCCCCACTGCCTTGTTGAATCTCTCTCTGTACTGTATGCACTGCCAAGTGTGAGACCATAATATGTAGTTTAATGAGAAACGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | GTCAGTTTATGTAGCCCCAGTGGGCTTTACTCATGCAAACTGACCTaGATCCTTCCGTTTCTCATTAAACTACATATTATGGTCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: VSLCSPSGLYSCKLT*ILPFLIKLHIMVSH Trigger: GTGTGAGACCATAATATGTAGTTTAATGAGAAACGGAAGGATGCAGGTCAGTTTGCATGAGTAAAGCCCACTGGGGCTACATAAACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | CATTTAGTGGACTGTCTCTCTCATTGTCTCTCTCTGCATCAGGACTaGCTCCTACCTTTAAAAGCTTCTGTTTACACATGGGATAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: HLVDCLSHCLSLHQD*LLPLKASVYTWDSL Trigger: TAAACTATCCCATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGACAATGAGAGAGACAGTCCACTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | TGCACTATCAATGAGAGGGACTGGACAGTAGTAACCTCCCGTTTGTaGTTCCTTTTTCAAACCACTTTGTCAATATACTCAGGACATAAT | + |
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Preference number: 1 (lower is better) Translates to: CTINERDWTVVTSRL*FLFQTTLSIYSGHN Trigger: ATTATGTCCTGAGTATATTGACAAAGTGGTTTGAAAAAGGAAGCACAAACGGGAGGTTACTACTGTCCAGTCCCTCTCATTGATAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR TCA 90 bp | TGGTGCTTTACTGGGGGTATAAAGGACACACAGATCATCTTAGAATaGGGCTTATATATCAGAGCTCTTTTAATTGTTGCGGACAAGATG | + |
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Preference number: 1 (lower is better) Translates to: WCFTGGIKDTQIILE*GLYIRALLIVADKM Trigger: CATCTTGTCCGCAACAATTAAAAGAGCTCTGATATATAAGCCTCATTCTAAGATGATCTGTGTGTCCTTTATACCCCCAGTAAAGCACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 90 bp | AATGACAAAAGTGTCAGTTTATGTAGCCCCAGTGGGCTTTACTCATaGAAACTGACCTGCATCCTTCCGTTTCTCATTAAACTACATATT | + |
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Preference number: 1 (lower is better) Translates to: NDKSVSLCSPSGLYS*KLTCILPFLIKLHI Trigger: AATATGTAGTTTAATGAGAAACGGAAGGATGCAGGTCAGTTTGCATGAGTAAAGCCCACTGGGGCTACATAAACTGACACTTTTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 90 bp | TTTCAATTCCTCCATATAAAGCACACACTACAATGTACTGTAAACTaGGTCCAGCATATCTGCCCTCATGCATGTTCACATAATCAAACC | + |
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Preference number: 1 (lower is better) Translates to: FQFLHIKHTLQCTVN*VQHICPHACSHNQT Trigger: GGTTTGATTATGTGAACATGCATGAGGGCAGATATGCTGGACCCAGTTTACAGTACATTGTAGTGTGTGCTTTATATGGAGGAATTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTCCGAGGCAGAGAAGCTaGCATGTTGGGAGAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: LRESRECNCINVRAPMPCPRQRS*HVGRES Trigger: TGATTCTCTCCCAACATGCCAGCTTCTCTGCCTCGG...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTAGTGTCTGTGGATACTaGGCACCGTGGAAGGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LRESRECNCINVRAPMPCSVCGY*APWKAN Trigger: GTTAGCCTTCCACGGTGCCCAGTATCCACAGACACT...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCAATTGTCAGGATGTGCTaGGAGCTGCTCATTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPIVRMC*ELLIVP Trigger: TGGGACAATGAGCAGCTCTCAGCACATCCTGACAAT...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCAGGGAACTGGAAACATTaGCTGACTGCCATGACAACT | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPGNWKH*LTAMTT Trigger: AGTTGTCATGGCAGTCAGTCAATGTTTCCAGTTCCC...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCATGCAGTCGGGAACATTaGACTATCAATGAGAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPCSREH*TINERD Trigger: GTCCCTCTCATTGATAGTGCAATGTTCCCGACTGCA...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCACTAATTCTTAGTGTGTaGTGTCTGCAGTACACCGTG | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPLILSV*CLQYTV Trigger: CACGGTGTACTGCAGACACCACACACTAAGAATTAG...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGCGTACAGCAGACCTCTaGCAACCCAGTGTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLSASGLPPTFKSFCLHMRTADL*QPSVLP Trigger: TGGAAGAACACTGGGTTGGCAGAGGTCTGCTGTACG...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCAGACCCAAAGTCACTGTaGAGATTGATGTCTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPDPKSL*RLMSVD Trigger: ATCAACAGACATCAATCTGCACAGTGACTTTGGGTC...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGAGTTTGAGGCCAGCCTaGTCTATAGAGGGAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLSASGLPPTFKSFCLHMSLRPA*SIEGVP Trigger: TGGAACTCCCTCTATAGATCAGGCTGGCCTCAAACT...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGTTAAACACATTTTGGTaGTTTACTGGGGGTATAAAG | + |
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Preference number: 2 (lower is better) Translates to: GTQASWCIPVREAERSRLLNTFW*FTGGIK Trigger: CTTTATACCCCCAGTAAAGCACCAAAATGTGTTTAA...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTTGGAACATAAGGTGTTaGACTTTACTACTGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LRESRECNCINVRAPMPCWNIRC*TLLLSH Trigger: ATGGCTCAGTAGTAAAGTGCAACACCTTATGTTCCA...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGACCTGGAGGAAAACTATaGCGGGCATTGAGAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRPGGKL*RALRGF Trigger: AAAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGG...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR TCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGATGCTCTCAAAACAAGTaGTTCTCTGAGGGTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRCSQNK*FSEGGS Trigger: ACTTCCACCCTCAGAGAATCACTTGTTTTGAGAGCA...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGTTAGTGTGTGGTGTCTaGAGTACACCGTGCAACTTA | + |
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Preference number: 2 (lower is better) Translates to: SLSASGLPPTFKSFCLHMLVCGV*STPCNL Trigger: TAAGTTGCACGGTGTACTGCAGACACCACACACTAA...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCCTGTATCAATGTGCGTaGCCCCATGCCATGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: KNTIASYFQAIRQDFNMLLYQCA*PHAMWM Trigger: CATCCACATGGCATGGGGGCACGCACATTGATACAG...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCACAAAATGTAAGACTGTaGCCTCTTAAAAATATGCCT | + |
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Preference number: 2 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPQNVRL*PLKNMP Trigger: AGGCATATTTTTAAGAGGCCACAGTCTTACATTTTG...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 90 bp | TGCATCCTTCCGTTTCTCATTAAACTACATATTATGGTCTCACACTaGGCAGTGCATACAGTACAGAGAGAGATTCAACAAGGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CILPFLIKLHIMVSH*AVHTVQREIQQGSG Trigger: CCCACTGCCTTGTTGAATCTCTCTCTGTACTGTATGCACTGCCAAGTGTGAGACCATAATATGTAGTTTAATGAGAAACGGAAGGATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAAGGGAGTCTAGAGAATaGAACTGTATCAATGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRRESRE*NCINVR Trigger: ACGCACATTGATACAGTTGCATTCTCTAGACTCCCT...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 90 bp | ATCTTTAACATAACTCAGGGAACATTTAGTGGACTGTCTCTCTCATaGTCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IFNITQGTFSGLSLS*SLSASGLPPTFKSF Trigger: GAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGACAATGAGAGAGACAGTCCACTAAATGTTCCCTGAGTTATGTTAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCGCAGTAAGGTGCTTCTaGTTTCTCACCCTCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: KNTIASYFQAIRQDFNMLAVRCF*FLTLFH Trigger: ATGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGC...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGGGTTAAACACATTTTaGTGCTTTACTGGGGGTATA | + |
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Preference number: 2 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRGLNTF*CFTGGI Trigger: TATACCCCCAGTAAAGCACCAAAATGTGTTTAACCC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 90 bp | TGGACAGTAGTAACCTCCCGTTTGTGCTTCCTTTTTCAAACCACTTaGTCAATATACTCAGGACATAATGGAATCCAATTGTGGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: WTVVTSRLCFLFQTT*SIYSGHNGIQLWDQ Trigger: TTGGTCCCACAATTGGATTCCATTATGTCCTGAGTATATTGACAAAGTGGTTTGAAAAAGGAAGCACAAACGGGAGGTTACTACTGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 90 bp | TTCTTGAGGATTAAGAAGCCAATGCTAGAGATGGAACATAAGGTGTaGCACTTTACTACTGAGCCATGCTCCAGTACAAAAACAAGACTC | + |
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Preference number: 2 (lower is better) Translates to: FLRIKKPMLEMEHKV*HFTTEPCSSTKTRL Trigger: GAGTCTTGTTTTTGTACTGGAGCATGGCTCAGTAGTAAAGTGCAACACCTTATGTTCCATCTCTAGCATTGGCTTCTTAATCCTCAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGATCCAATACCCTAAATTaGGCCACTGTTAACTATAAG | + |
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Preference number: 2 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRSNTLN*ATVNYK Trigger: CTTATAGTTAACAGTGGCCCAATTTAGGGTATTGGA...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 72 bp | GGCAGAGAGAAGCAGACTGCTGCAGAGTGCCTGGCCTaGACAGCAAATCCTAGGCCAGCCAGGGCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: GREKQTAAECLA*TANPRPARATQ Trigger: CTGTGTAGCCCTGGCTGGCCTAGGATTTGCTGTGCAGGCCAGGCACTCTGCAGCAGTCTGCTTCTCTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 72 bp | AGAGAGGCAGAGAGAAGCAGACTGCTGCAGAGTGCCTaGCCTGCACAGCAAATCCTAGGCCAGCCAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: REAERSRLLQSA*PAQQILGQPGL Trigger: TAGCCCTGGCTGGCCTAGGATTTGCTGTGCAGGCCAGGCACTCTGCAGCAGTCTGCTTCTCTCTGCCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCACCGTCTCCAGGAGGCTaGTTCTCTCTGCAGTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPPSPGG*FSLQSG Trigger: TCCCGACTGCAGAGAGAACAAGCCTCCTGGAGACGG...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR TCA 72 bp | GAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTaGGAGGCTTTCGCTTCTGGGAAGATTCTGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: EAMFLEENYGGH*EAFASGKILGN Trigger: GTTGCCCAGAATCTTCCCAGAAGCGAAAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 72 bp | TTGGGAACAGCAAAGACAAGCAGTGTCTGTGGATACTaGGCACCGTGGAAGGCTAACTACACTGGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: LGTAKTSSVCGY*APWKANYTGNW Trigger: CCAGTTCCCAGTGTAGTTAGCCTTCCACGGTGCCCAGTATCCACAGACACTGCTTGTCTTTGCTGTTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 72 bp | GGCTGTAATCTTGGATTGTCAGGATGTGCTGAGAGCTaGTCATTGTCCCAGTTCATCCCCACTTACAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GCNLGLSGCAES*SLSQFIPTYKA Trigger: GGCTTTGTAAGTGGGGATGAACTGGGACAATGAGCAGCTCTCAGCACATCCTGACAATCCAAGATTACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 72 bp | GTCTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTaGGTGCCCCCATGCCATGTGGATGCTGTCATTCTA | + |
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Preference number: 3 (lower is better) Translates to: VSGSLENATVSM*VPPCHVDAVIL Trigger: TAGAATGACAGCATCCACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR TCA 72 bp | AGCGGCTGTGCTTCAGCACAGATCTTCTCAGTTCACTaGAAGATGAATCCCAAAGTAGCTCGTACAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: SGCASAQIFSVH*KMNPKVARTAD Trigger: GTCTGCTGTACGAGCTACTTTGGGATTCATCTTTCAGTGAACTGAGAAGATCTGTGCTGAAGCACAGCCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 72 bp | AAAAACCAAAAACAACCAGGGACGCAGGCATCTTGGTaGATACCTGTAAGAGAGGCAGAGAGAAGCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: KNQKQPGTQASW*IPVREAERSRL Trigger: CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCCTGGTTGTTTTTGGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CCA 72 bp | ACACATCTCTTAAAAGTGACCAGGAAGCCATGTTCCTaGAGGAAAACTATGGCGGGCATTGAGAGGCTTTCG | + |
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Preference number: 3 (lower is better) Translates to: THLLKVTRKPCS*RKTMAGIERLS Trigger: CGAAAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCACTTTTAAGAGATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR GCA 72 bp | TCTCTCTGTCTCTACAAGCTGACATGGAAGCGGCTGTaGTTCAGCACAGATCTTCTCAGTTCACTGAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLCLYKLTWKRL*FSTDLLSSLKD Trigger: ATCTTTCAGTGAACTGAGAAGATCTGTGCTGAAGCACAGCCGCTTCCATGTCAGCTTGTAGAGACAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | CTCCCTGACAGGCCCACTAAAGACCCAAAGTCACTGTaGAGATTGATGTCTGTTGATGAGTGTATTACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPDRPTKDPKSL*RLMSVDECITR Trigger: CCTTGTAATACACTCATCAACAGACATCAATCTGCACAGTGACTTTGGGTCTTTAGTGGGCCTGTCAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CCA 72 bp | AACAAAAACCAAAAACAACCAGGGACGCAGGCATCTTaGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NKNQKQPGTQAS*CIPVREAERSR Trigger: TCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCCTGGTTGTTTTTGGTTTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCGCTGAGAGCTGCTCATaGTCCCAGTTCATCCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: KNTIASYFQAIRQDFNMLAESCS*SQFIPT Trigger: AGTGGGGATGAACTGGGACAATGAGCAGCTCTCAGC...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | CTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATaGCATGTGGATGCTGTCATTCTATATCCTACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LENATVSMCVPP*HVDAVILYPTE Trigger: TTCAGTAGGATATAGAATGACAGCATCCACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | GACTGTCTCTCTCATTGTCTCTCTCTGCATCAGGACTaGCTCCTACCTTTAAAAGCTTCTGTTTACACATGG | + |
|
Preference number: 3 (lower is better) Translates to: DCLSHCLSLHQD*LLPLKASVYTW Trigger: CCATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGACAATGAGAGAGACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | GGGGAAACCACAGGAAAGGGAAATGCCACCGGTAACTaGAAAGACTTCATAGGAAAGACAAAGGAATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GETTGKGNATGN*KDFIGKTKEFA Trigger: TGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGCATTTCCCTTTCCTGTGGTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR TCA 72 bp | GCATGTTGGGAGAGAATCATTTACTTGAAAACAGGCTaGAGGCTCACTCCAGGCTGTAATCTTGGATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ACWERIIYLKTG*RLTPGCNLGLS Trigger: TGACAATCCAAGATTACAGCCTGGAGTGAGCCTTCAGCCTGTTTTCAAGTAAATGATTCTCTCCCAACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR TCA 72 bp | CTGACTGCCATGACAACTAGACACATGAATGAACTCTaGAGGCCAGAGCTTATCACTTATGGTCTGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LTAMTTRHMNEL*RPELITYGLMT Trigger: AGTCATCAGACCATAAGTGATAAGCTCTGGCCTTCAGAGTTCATTCATGTGTCTAGTTGTCATGGCAGTCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | CCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATaGTCTAACATAAAGTTCAGGCCTCACGACTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPISKQLGRILT*SNIKFRPHDCS Trigger: ACTGCAGTCGTGAGGCCTGAACTTTATGTTAGAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | GGCAGTGGGGACTGTGTCGAAAACATTGTAAGAAACTaGTATAGGATGCAACCCTTGTTACATCACACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGDCVENIVRN*YRMQPLLHHTK Trigger: TTTTGTGTGATGTAACAAGGGTTGCATCCTATAGCAGTTTCTTACAATGTTTTCGACACAGTCCCCACTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | TGTAGCCCCAGTGGGCTTTACTCATGCAAACTGACCTaGATCCTTCCGTTTCTCATTAAACTACATATTATG | + |
|
Preference number: 3 (lower is better) Translates to: CSPSGLYSCKLT*ILPFLIKLHIM Trigger: CATAATATGTAGTTTAATGAGAAACGGAAGGATGCAGGTCAGTTTGCATGAGTAAAGCCCACTGGGGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CCA 72 bp | CTCCATATAAAGCACACACTACAATGTACTGTAAACTaGGTCCAGCATATCTGCCCTCATGCATGTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LHIKHTLQCTVN*VQHICPHACSH Trigger: ATGTGAACATGCATGAGGGCAGATATGCTGGACCCAGTTTACAGTACATTGTAGTGTGTGCTTTATATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CCA 72 bp | AGTGCATACAGTACAGAGAGAGATTCAACAAGGCAGTaGGGACTGTGTCGAAAACATTGTAAGAAACTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SAYSTERDSTRQ*GLCRKHCKKLL Trigger: TAGCAGTTTCTTACAATGTTTTCGACACAGTCCCCACTGCCTTGTTGAATCTCTCTCTGTACTGTATGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CCA 72 bp | TGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATaGAGAAACCTAAAATGCCGCATTACACCCCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CKDFIGKTKEFA*RNLKCRITPLD Trigger: GTCAAGGGGTGTAATGCGGCATTTTAGGTTTCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR GCA 72 bp | TCATTAAACTACATATTATGGTCTCACACTTGGCAGTaGATACAGTACAGAGAGAGATTCAACAAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLNYILWSHTWQ*IQYRERFNKAV Trigger: CACTGCCTTGTTGAATCTCTCTCTGTACTGTATGCACTGCCAAGTGTGAGACCATAATATGTAGTTTAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR TCA 72 bp | ACTGGGGGTATAAAGGACACACAGATCATCTTAGAATaGGGCTTATATATCAGAGCTCTTTTAATTGTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: TGGIKDTQIILE*GLYIRALLIVA Trigger: CGCAACAATTAAAAGAGCTCTGATATATAAGCCTCATTCTAAGATGATCTGTGTGTCCTTTATACCCCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR TCA 72 bp | TGTTCGACATTCATATTTATACAAATGAGAACCCTCTaGACGTTCACACACACTGTAGAGTCCACAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSTFIFIQMRTL*TFTHTVESTKC Trigger: ACACTTTGTGGACTCTACAGTGTGTGTGAACGTTCAGAGGGTTCTCATTTGTATAAATATGAATGTCGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTACCGAGCACAGCTGCTaGTGCACGGCTCGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLTEHSC*CTARRS Trigger: GGATCTGCGAGCCGTGCATCAGCAGCTGTGCTCGGT...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGGGGTTCTGCTGTCTGTaGAGGCCCAAGCTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLGFCCL*RPKLAS Trigger: GGAAGCCAGCTTGGGCCTTCACAGACAGCAGAACCC...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTAAAGCCCGGCCCAGCTaGATTCTTCGGCCGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGKARPS*ILRPET Trigger: AGTCTCCGGCCGAAGAATGCAGCTGGGCCGGGCTTT...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCAAGAGCGTCGATCTCCTaGTCGGTCATCTCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPRASIS*SVISGA Trigger: CGCCCCCGAGATGACCGAGCAGGAGATCGACGCTCT...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTCCAAGAGCTCCTGGATaGGCCTCCTGGCCCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRESRECNCINVRAPMPCPRAPG*ASWPAE Trigger: TTCAGCGGGCCAGGAGGCGCATCCAGGAGCTCTTGG...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGGGCGTGCACAGACGCTaGCATCTCTTCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLGVHRR*HLFLLQ Trigger: CTGGAGAAGGAAGAGATGGCAGCGTCTGTGCACGCC...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTCACGTGTCCAGGCCGTaGCCCAGGTATACCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLHVSRP*PRYTWS Trigger: ACTCCAGGTATACCTGGGCCACGGCCTGGACACGTG...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | GGAGGGGTGGGGAAGGAACAGCCGTCTCCAGGAGGCTaGTTCTCTCTGCAGTCGGGAACATTGCACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGKEQPSPGG*FSLQSGTLHYQ Trigger: TTGATAGTGCAATGTTCCCGACTGCAGAGAGAACAAGCCTCCTGGAGACGGCTGTTCCTTCCCCACCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTGTAGGCTTTCTTGGCTaGGACACGGCCCCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLVGFLG*DTAPSC Trigger: GCAAGAAGGGGCCGTGTCTCAGCCAAGAAAGCCTAC...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTGTCTTCTCCTGCCCCTaGAGCACTGTTGGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLVFSCP*STVGRE Trigger: CTCTCTGCCAACAGTGCTGCAGGGGCAGGAGAAGAC...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTACCTCTGTCTTCTCCTaGCCCTGCAGCACTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGTSVFS*PCSTVG Trigger: GCCAACAGTGCTGCAGGGGCAGGAGAAGACAGAGGT...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGCGTGCGCTGACCAGCTaGCTGCTATCAAAGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLRALTS*LLSKRC Trigger: ACACCTCTTTGATAGCAGCCAGCTGGTCAGCGCACG...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGCTCTTCCTCATCCTCTaGCTCTGGGGACGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLLFLIL*LWGRFF Trigger: AAAGAAGCGTCCCCAGAGTCAGAGGATGAGGAAGAG...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGTGGCGTGCCTTCTGCTaGAGTTTCTGTAGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLWRAFC*SFCSSS Trigger: GGAAGAGCTACAGAAACTGCAGCAGAAGGCACGCCA...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTCCCCTGCAGCACTGTTaGCAGAGAGTGACACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRESRECNCINVRAPMPCPLQHC*QRVTLL Trigger: GAGCAGTGTCACTCTCTGCCAACAGTGCTGCAGGGG...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTTGGGCCGTCCGGTTGTaGCAGGTTATAGCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLWAVRL*QVIANL Trigger: CAAGTTTGCTATAACCTGTCACAACCGGACGGCCCA...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTGACAAAACAGCCATGTaGGCTTTCCGCTGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLDKTAM*AFRCQS Trigger: TGACTGGCAGCGGAAAGCTCACATGGCTGTTTTGTC...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTGCTTTTTCCGTGCGCTaGCCAGCTGGCTGCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRESRECNCINVRAPMPCAFSVR*PAGCYQ Trigger: TTGATAGCAGCCAGCTGGTCAGCGCACGGAAAAAGC...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTCACTTCATCCATGGGTaGACTCACTCTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGHFIHG*THSPPL Trigger: CAGAGGAGGAGAGTGAGTTCACCCATGGATGAAGTG...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTTGGCCTCTGCAAGGCTaGTGTAGGCTTCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRESRECNCINVRAPMPCWPLQG*CRLHPP Trigger: TGGAGGATGAAGCCTACAGCAGCCTTGCAGAGGCCA...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTAGTTCTCCCAGTCTGTaGACGGCAAAGCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLSSPSL*TAKPLP Trigger: AGGAAGAGGCTTTGCCGTGCACAGACTGGGAGAACT...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTGCTGTCTTCGTAGCATaGCCAGTTCTCGCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGAVFVA*PVLACL Trigger: GAGACATGCGAGAACTGGCCATGCTACGAAGACAGC...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGGATCATCCGTCTCGGTaGAAAGAACCTGAGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLDHPSR*KEPEKG Trigger: TCCTTTCTCAGGTTCTTTTCACCGAGACGGATGATC...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGGCCCCATTGTCCTTTaGAACAGGCAGGGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRGPIVL*NRQGWG Trigger: CCCCCACCCCTGCCTGTTGCAAAGGACAATGGGGCC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTCTTCCTTCTCCAGCATaGCCTCCATGCTTTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGLPSPA*PPCFRK Trigger: CTTACGAAAGCATGGAGGCCATGCTGGAGAAGGAAG...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTCGTTCCAGGCCACAATaGACACAAACTTGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGRSRPQ*TQTCAS Trigger: AGAAGCACAAGTTTGTGTTCATTGTGGCCTGGAACG...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGGCTTCATCCTCCATCTaGTACAAGTCCAAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLASSSI*YKSKSS Trigger: AGAGCTTTTGGACTTGTATCAGATGGAGGATGAAGC...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTCCAGCATGGCCTCCATaGTTTCGTAAGTGTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRESRECNCINVRAPMPCPAWPP*FRKCRS Trigger: ACTACGACACTTACGAAAGCATGGAGGCCATGCTGG...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGGCTATCAAAGAGGTGTaGTGCGGGGGCACTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSASGLPPTFKSFCLHMAIKEV*CGGTGR Trigger: TCGGCCAGTGCCCCCGCAGCACACCTCTTTGATAGC...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCCGCTCGTCGAATACGTaGGGCCGCACCGCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLRSSNT*GRTATQ Trigger: CTGGGTGGCGGTGCGGCCCCACGTATTCGACGAGCG...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTGAAGTGTCTTCAAGTTaGACAAGGCTCTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGEVSSS*TRLWGS Trigger: AGAACCCCAGAGCCTTGTCCAACTTGAAGACACTTC...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR TCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTTTGCCAAATTTCTTCTaGTCTGCTCGCATCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGLPNFF*SARIRS Trigger: TGATCGGATGCGAGCAGATCAGAAGAAATTTGGCAA...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTATGAACACAAACTTGTaGTTCTCGCGCTCGTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGMNTNL*FSRSSN Trigger: ATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCAT...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGCTTTTTCTTCTTGAATaGGCCACTCGTAATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQASWCIPVREAERSRLLFLLE*ATRNLV Trigger: GACCAGATTACGAGTGGCGCATTCAAGAAGAAAAAG...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGTGGCCGACTTTGGGATaGTCCTCTCATTGCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSASGLPPTFKSFCLHMWPTLG*SSHCPP Trigger: CGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCA...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCGTGCTGCGGGGGCACTaGCCGACTTTGGGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLVLRGH*PTLGCS Trigger: GGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCAC...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | AATCTTGGATTGTCAGGATGTGCTGAGAGCTGCTCATaGTCCCAGTTCATCCCCACTTACAAAGCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGLSGCAESCS*SQFIPTYKAQA Trigger: TGCCTGGGCTTTGTAAGTGGGGATGAACTGGGACAATGAGCAGCTCTCAGCACATCCTGACAATCCAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCCACCGTCCACATGCCTaGCGGCTCTTCGGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLHRPHA*RLFGEH Trigger: GTGTTCCCCGAAGAGCCGTCAGGCATGTGGACGGTG...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR TCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTTATTCATCTTCACTCTaGAAACGCTGCTGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGYSSSL*KRCWNF Trigger: GAAGTTCCAGCAGCGTTTTCAGAGTGAAGATGAATA...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGATGCTTCCAGCTGGCGTaGCTTCTGCTGCAGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRCFQLA*LLLQFL Trigger: CAGAAACTGCAGCAGAAGGCACGCCAGCTGGAAGCA...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACACCTGGATGCGCCTCCTaGCCCGCTGAAGCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTPGCAS*PAEAPL Trigger: AAGAGGTGCTTCAGCGGGCCAGGAGGCGCATCCAGG...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACATTGTCCAAGAGCTCCTaGATGCGCCTCCTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTLSKSS*MRLLAR Trigger: GCGGGCCAGGAGGCGCATCCAGGAGCTCTTGGACAA...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGACTTCTTGCTTCCAGCTaGCGTGCCTTCTGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRLLASS*RAFCCS Trigger: ACTGCAGCAGAAGGCACGCCAGCTGGAAGCAAGAAG...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTTATCAGGCAGAAGTGTaGAGGATTCTCTCAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGYQAEV*RILSKL Trigger: AAGTTTTGAGAGAATCCTTCACACTTCTGCCTGATA...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAAGCTGGCGTGCCTTCTaGTGCAGTTTCTGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRSWRAF*CSFCSS Trigger: AGAGCTACAGAAACTGCAGCAGAAGGCACGCCAGCT...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGCCCTCCGTCCTAAGTaGATCTTTCTCCAGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRALRPK*IFLQCL Trigger: GAGACACTGGAGAAAGATGCACTTAGGACGGAGGGC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGGTAGAGTTCAGTTGTaGCCTCTGCAAGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRGRVQL*PLQGCC Trigger: ACAGCAGCCTTGCAGAGGCCACAACTGAACTCTACC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCTGTGAAGGCCCAAGCTaGCTTCCTCCTCCTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLCEGPS*LPPPPT Trigger: GGTGGGAGGAGGAGGAAGCCAGCTTGGGCCTTCACA...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCAAAATTTCTTCTGATCTaGTCGCATCCGATCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPKFLLI*SHPIIH Trigger: GTGTATGATCGGATGCGAGCAGATCAGAAGAAATTT...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCAGACACGGCTCCAGCTaGGAGTTTACCGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLRHGSS*EFTEHS Trigger: GCTGTGCTCGGTAAACTCCCAGCTGGAGCCGTGTCT...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 72 bp | AAACAAAAACCAAAAACAACCAGGGACGCAGGCATCTaGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQKPKTTRDAGI*VHTCKRGREKQ Trigger: CTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCCTGGTTGTTTTTGGTTTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| 3UTR CAA 72 bp | GACAGGCCCACTAAAGACCCAAAGTCACTGTGCAGATaGATGTCTGTTGATGAGTGTATTACAAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DRPTKDPKSLCR*MSVDECITRLD Trigger: GTCCAGCCTTGTAATACACTCATCAACAGACATCAATCTGCACAGTGACTTTGGGTCTTTAGTGGGCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCTCTGCCGCAGCTCGCTaGGGCTTTCGTAATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLSAAAR*GFRNTP Trigger: AGGAGTATTACGAAAGCCTCAGCGAGCTGCGGCAGA...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR TCA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCATCATACACAGCTTTCTaGGCTTTTGCTGTTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPSYTAF*AFAVIS Trigger: TGAAATAACAGCAAAAGCTCAGAAAGCTGTGTATGA...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGAGCTGCTGCCCACGATaGTTTGCCAAATTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSASGLPPTFKSFCLHMSCCPR*FAKFLL Trigger: CAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCT...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | AGCAATGGGACTGGCCACTATGAGATTATGATTGGGCAGATGGGGAGGAGGGGTTTAGCTCTCATCATCTaGAAAGTCTCTTTAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SNGTGHYEIMIGQMGRRGLALII*KVSLET Trigger: AGTTTCTAAAGAGACTTTGCAGATGATGAGAGCTAA...ACCCCTCCTCCCCATCTGCCCAATCATAATCTCATAGTGGCCAGTCCCATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTACCCCTTTCCTTATCTaGGCCAAAATATTATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: VTRKPCSWRKTMAGIERLTPFLI*AKILLL Trigger: TAGTAATAATATTTTGGCGCAGATAAGGAAAGGGGT...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGTCCTCTGTCTCTCTTaGCTAACCCAGGCACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRVLCLS*LTQALF Trigger: AAAAAGTGCCTGGGTTAGCCAAGAGAGACAGAGGAC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | ATAACTCAGGGAACATTTAGTGGACTGTCTCTCTCATaGTCTCTCTCTGCATCAGGACTGCCTCCTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITQGTFSGLSLS*SLSASGLPPTF Trigger: AAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGACAATGAGAGAGACAGTCCACTAAATGTTCCCTGAGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCTTCAGTTGTGGCCTCTaGAAGGCTGCTGTAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLFSCGL*KAAVGF Trigger: GAAGCCTACAGCAGCCTTGCAGAGGCCACAACTGAA...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGATGGAAATCTTGATCTaGTGTCTTCGTAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSASGLPPTFKSFCLHMMEILI*CLRSMA Trigger: GGCCATGCTACGAAGACAGCAGATCAAGATTTCCAT...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCTTTCTCCAGTGTCTCTaGAGTGGTGGAGGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLFLQCL*SGGGPI Trigger: AATGGGGCCTCCACCACTGCAGAGACACTGGAGAAA...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR TCA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGATCAACCTTTTTCAGATaGAAGCTACCACGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRSTFFR*KLPRFK Trigger: CTTGAAGCGTGGTAGCTTTCATCTGAAAAAGGTTGA...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR TCA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACATTGACGGTGAGATCCTaGATAGACAAAACAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTLTVRS*IDKTAM Trigger: CATGGCTGTTTTGTCTATTCAGGATCTCACCGTCAA...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACACTTTCTATAGTCTTGTaGTTGTCCAAGAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTLSIVL*LSKSSW Trigger: CCAGGAGCTCTTGGACAAGCACAAGACTATAGAAAG...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCCTGCCCACGATGCTTTaGCAAATTTCTTCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLLPTML*QISSDL Trigger: CAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAG...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR GCA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCCCACCCTGTAAGCTTTaGATCTCTTCTTTTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNTIASYFQAIRQDFNMLPPCKL*ISSFSA Trigger: TGCACTAAAAGAAGAGATGCAAAGCTTACAGGGTGG...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACAGAGGAGGTAATGAGGTaGATTCAAGTTGTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTEEVMR*IQVVLM Trigger: CATCAGAACAACTTGAATCCACCTCATTACCTCCTC...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | GTAACCTCCCGTTTGTGCTTCCTTTTTCAAACCACTTaGTCAATATACTCAGGACATAATGGAATCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRLCFLFQTT*SIYSGHNGIQL Trigger: CAATTGGATTCCATTATGTCCTGAGTATATTGACAAAGTGGTTTGAAAAAGGAAGCACAAACGGGAGGTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | CCGTTTCTCATTAAACTACATATTATGGTCTCACACTaGGCAGTGCATACAGTACAGAGAGAGATTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLIKLHIMVSH*AVHTVQREIQQ Trigger: TTGTTGAATCTCTCTCTGTACTGTATGCACTGCCAAGTGTGAGACCATAATATGTAGTTTAATGAGAAACGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| 3UTR CAA 72 bp | ACGCCGGGAAAGAACTTTCTACAAATGAAGTTCTTTTaGGTATTTCAATTCCTCCATATAAAGCACACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TPGKNFLQMKFF*VFQFLHIKHTL Trigger: TAGTGTGTGCTTTATATGGAGGAATTGAAATACCAAAAAGAACTTCATTTGTAGAAAGTTCTTTCCCGGCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
||
| CDS GCA 90 bp | CCGGTCCTCTGCCCGCGGGACCCCGAGGAGGATCCCCCTTCAGGCTaGGCGCGCTGCGCGGAGAGCCGCCCTCGGCCCAGGCCTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLCPRDPEEDPPSG*ARCAESRPRPRPGF Trigger: AAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCGCGCAGCCTGAAGGGGGATCCTCCTCGGGGTCCCGCGGGCAGAGGACCGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
||
| CDS TCA 90 bp | TGGCCCGGGACTCCGGAGCGCTGCTGTAGCAGAGGCAGCGGCCTCTaGCCGACCCCTGGCCGCGGGGCTGCCCGGACCGCGACTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WPGTPERCCSRGSGL*PTPGRGAARTATPI Trigger: GATGGGAGTCGCGGTCCGGGCAGCCCCGCGGCCAGGGGTCGGTCAGAGGCCGCTGCCTCTGCTACAGCAGCGCTCCGGAGTCCCGGGCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
||
| CDS CCA 90 bp | CGCGCTGCGCGGAGAGCCGCCCTCGGCCCAGGCCTGGCTTTTCCGTaGCCCGGGACTCCGGAGCGCTGCTGTAGCAGAGGCAGCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAARRAALGPGLAFP*PGTPERCCSRGSGL Trigger: GAGGCCGCTGCCTCTGCTACAGCAGCGCTCCGGAGTCCCGGGCCACGGAAAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
||
| CDS CCA 90 bp | TTCAGGCTGCGCGCGCTGCGCGGAGAGCCGCCCTCGGCCCAGGCCTaGCTTTTCCGTGGCCCGGGACTCCGGAGCGCTGCTGTAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FRLRALRGEPPSAQA*LFRGPGLRSAAVAE Trigger: CTCTGCTACAGCAGCGCTCCGGAGTCCCGGGCCACGGAAAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCGCGCAGCCTGAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
||
| CDS GCA 90 bp | CTGCATTCTTCGGCCGGAGACTCCAGCTCCGCGGCAGACGGCGGCTaGTCCGAGTCCGGGAGCGGCTGTGGCGCCTCGTCCTCCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LHSSAGDSSSAADGG*SESGSGCGASSSLT Trigger: GGTGAGGGAGGACGAGGCGCCACAGCCGCTCCCGGACTCGGAGCAGCCGCCGTCTGCCGCGGAGCTGGAGTCTCCGGCCGAAGAATGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 90 bp | CAGCTCCGCGGCAGACGGCGGCTGCTCCGAGTCCGGGAGCGGCTGTaGCGCCTCGTCCTCCCTCACCATTTCCAGGACCTCGATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLRGRRRLLRVRERL*RLVLPHHFQDLDLL Trigger: GAGGAGATCGAGGTCCTGGAAATGGTGAGGGAGGACGAGGCGCCACAGCCGCTCCCGGACTCGGAGCAGCCGCCGTCTGCCGCGGAGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 90 bp | GATGCACGGCTCGCAGATCCTGGAAGGAGAAAAGCCCGGCCCAGCTaGATTCTTCGGCCGGAGACTCCAGCTCCGCGGCAGACGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DARLADPGRRKARPS*ILRPETPAPRQTAA Trigger: AGCCGCCGTCTGCCGCGGAGCTGGAGTCTCCGGCCGAAGAATGCAGCTGGGCCGGGCTTTTCTCCTTCCAGGATCTGCGAGCCGTGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS TCA 90 bp | ACCGGCAGACACGGCTCCAGCTGGGAGTTTACCGAGCACAGCTGCTaGTGCACGGCTCGCAGATCCTGGAAGGAGAAAAGCCCGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGRHGSSWEFTEHSC*CTARRSWKEKSPAQ Trigger: CTGGGCCGGGCTTTTCTCCTTCCAGGATCTGCGAGCCGTGCATCAGCAGCTGTGCTCGGTAAACTCCCAGCTGGAGCCGTGTCTGCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 90 bp | GCCACAATGAACACAAACTTGTGCTTCTCGCGCTCGTCGAATACGTaGGGCCGCACCGCCACCCAGTCGGACTCGAGTGTCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATMNTNLCFSRSSNT*GRTATQSDSSVSSS Trigger: GCTGGAGGAGACACTCGAGTCCGACTGGGTGGCGGTGCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 90 bp | TTGGCTGAGACACGGCCCCTTCTTGCTTCCAGCTGGCGTGCCTTCTaGTGCAGTTTCTGTAGCTCTTCCCTCTGGGCGTGCACAGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAETRPLLASSWRAF*CSFCSSSLWACTDA Trigger: AGCGTCTGTGCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAAGGCACGCCAGCTGGAAGCAAGAAGGGGCCGTGTCTCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | GAGCTTTTTCCGTGCGCTGACCAGCTGGCTGCTATCAAAGAGGTGTaGTGCGGGGGCACTGGCCGACTTTGGGATGCTCCTCTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELFPCADQLAAIKEV*CGGTGRLWDAPLIA Trigger: GGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCTCTTTGATAGCAGCCAGCTGGTCAGCGCACGGAAAAAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | TCCAGCTGGCGTGCCTTCTGCTGCAGTTTCTGTAGCTCTTCCCTCTaGGCGTGCACAGACGCTGCCATCTCTTCCTTCTCCAGCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWRAFCCSFCSSSL*ACTDAAISSFSSMA Trigger: GGCCATGCTGGAGAAGGAAGAGATGGCAGCGTCTGTGCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAAGGCACGCCAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 90 bp | GCCTGTTCCCGGGAACCGCTCCTCTGTCTCTGGGCCGTCCGGTTGTaGCAGGTTATAGCAAACTTGCCTTCGATCTCGTTCCAGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ACSREPLLCLWAVRL*QVIANLPSISFQAT Trigger: TGTGGCCTGGAACGAGATCGAAGGCAAGTTTGCTATAACCTGTCACAACCGGACGGCCCAGAGACAGAGGAGCGGTTCCCGGGAACAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 90 bp | TGGCGTGCCTTCTGCTGCAGTTTCTGTAGCTCTTCCCTCTGGGCGTaGACAGACGCTGCCATCTCTTCCTTCTCCAGCATGGCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WRAFCCSFCSSSLWA*TDAAISSFSSMASM Trigger: CATGGAGGCCATGCTGGAGAAGGAAGAGATGGCAGCGTCTGTGCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAAGGCACGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | AACTTGCCTTCGATCTCGTTCCAGGCCACAATGAACACAAACTTGTaGTTCTCGCGCTCGTCGAATACGTGGGGCCGCACCGCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLPSISFQATMNTNL*FSRSSNTWGRTATQ Trigger: CTGGGTGGCGGTGCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGTGGCCTGGAACGAGATCGAAGGCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 90 bp | CCTCTCATTGCCCTCCGTCCTAAGTGCATCTTTCTCCAGTGTCTCTaGAGTGGTGGAGGCCCCATTGTCCTTTGCAACAGGCAGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLIALRPKCIFLQCL*SGGGPIVLCNRQGW Trigger: CCACCCCTGCCTGTTGCAAAGGACAATGGGGCCTCCACCACTGCAGAGACACTGGAGAAAGATGCACTTAGGACGGAGGGCAATGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | CTGGCTGCTATCAAAGAGGTGTGCTGCGGGGGCACTGGCCGACTTTaGGATGCTCCTCTCATTGCCCTCCGTCCTAAGTGCATCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAAIKEVCCGGTGRL*DAPLIALRPKCIFL Trigger: GAGAAAGATGCACTTAGGACGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCTCTTTGATAGCAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | GTGACCAGGAAGCCATGTTCCTGGAGGAAAACTATGGCGGGCATTGAGAGGCTTAGACACGGCCCCTTCTaGCTTCCAGCTGGCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTRKPCSWRKTMAGIERLRHGPF*LPAGVP Trigger: AGGCACGCCAGCTGGAAGCAAGAAGGGGCCGTGTCT...AAGCCTCTCAATGCCCGCCATAGTTTTCCTCCAGGAACATGGCTTCCTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | TGCTCCTCACAGGGCACAGGGCTTGCTGTGCTTTTTCTTCTTGAATaGGCCACTCGTAATCTGGTCGACTTAAGGATGACTTGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSQGTGLAVLFLLE*ATRNLVDLRMTCPG Trigger: CCCCGGGCAAGTCATCCTTAAGTCGACCAGATTACGAGTGGCGCATTCAAGAAGAAAAAGCACAGCAAGCCCTGTGCCCTGTGAGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 90 bp | AGTAACAGAACACGGTTTGGGGTCAATACTAGTCAACAGTGGAGCTaGCTGTGGAGGAGGCAGTTCAGAGCTGACGACAGCACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNRTRFGVNTSQQWS*LWRRQFRADDSTRR Trigger: CCTCCTCGTGCTGTCGTCAGCTCTGAACTGCCTCCTCCACAGTCAGCTCCACTGTTGACTAGTATTGACCCCAAACCGTGTTCTGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | GGGACGCAGGCATCTTGGTGCATACCTGTAAGAGAGGCAGAGAGAAGCAGACTGACAATGAACACAAACTaGTGCTTCTCGCGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTQASWCIPVREAERSRLTMNTN*CFSRSS Trigger: CGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGT...CAGTCTGCTTCTCTCTGCCTCTCTTACAGGTATGCACCAAGATGCCTGCGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | CCTGAACACAGTGTGCTCAGCAGTAAGGTGCTTCTGCTTTCTCACCCTCTTCCACACAGGGCACAGGGCTaGCTGTGCTTTTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PEHSVLSSKVLLLSHPLPHRAQG*LCFFFL Trigger: CAAGAAGAAAAAGCACAGCAAGCCCTGTGCCCTGTG...TGGAAGAGGGTGAGAAAGCAGAAGCACCTTACTGCTGAGCACACTGTGTTCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAAGGCCCCATTGTCCTTaGCAACAGGCAGGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRRPHCP*QQAGVG Trigger: CCCCACCCCTGCCTGTTGCAAAGGACAATGGGGCCT...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | CGTGCACAGACGCTGCCATCTCTTCCTTCTCCAGCATGGCCTCCATaGTTTCGTAAGTGTCGTAGTACACCACTTCATCTCTCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAQTLPSLPSPAWPP*FRKCRSTPLHLSFL Trigger: CAGAAAAGAGAGATGAAGTGGTGTACTACGACACTTACGAAAGCATGGAGGCCATGCTGGAGAAGGAAGAGATGGCAGCGTCTGTGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | GATTCAAGTTGTTCTGATGAAGTGTCTTCAAGTTGGACAAGGCTCTaGGGTTCTGCTGTCTGTGAAGGCCCAAGCTGGCTTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSCSDEVSSSWTRL*GSAVCEGPSWLPPP Trigger: AGGAGGAGGAAGCCAGCTTGGGCCTTCACAGACAGCAGAACCCCAGAGCCTTGTCCAACTTGAAGACACTTCATCAGAACAACTTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGCCCCTGCAGCACTGTaGGCAGAGAGTGACACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRAPAAL*AESDTA Trigger: AGCAGTGTCACTCTCTGCCAACAGTGCTGCAGGGGC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | GCCACCGGTAACTGCAAAGACTTCATAGGAAAGACAAAGGAATTTGCATGGAGAGTGGTGGAGGCCCCATaGTCCTTTGCAACAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATGNCKDFIGKTKEFAWRVVEAP*SFATGR Trigger: CCTGCCTGTTGCAAAGGACAATGGGGCCTCCACCAC...TCTCCATGCAAATTCCTTTGTCTTTCCTATGAAGTCTTTGCAGTTACCGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | GGTAATGAGGTGGATTCAAGTTGTTCTGATGAAGTGTCTTCAAGTTaGACAAGGCTCTGGGGTTCTGCTGTCTGTGAAGGCCCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GNEVDSSCSDEVSSS*TRLWGSAVCEGPSW Trigger: CCAGCTTGGGCCTTCACAGACAGCAGAACCCCAGAGCCTTGTCCAACTTGAAGACACTTCATCAGAACAACTTGAATCCACCTCATTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | TCCTCTGACTCTGGGGACGCTTCTTTGATTCTTCTTAGAGCTTCGTaGATACTCCGTGTCAAAGGGTCGGTATCAGGCAGAAGTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSDSGDASLILLRAS*ILRVKGSVSGRSVK Trigger: CTTCACACTTCTGCCTGATACCGACCCTTTGACACGGAGTATCCACGAAGCTCTAAGAAGAATCAAAGAAGCGTCCCCAGAGTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | TGCATACTGGAGTTTTTCCATTCGCTCAGCAGCTGCTGCCCACGATaGTTTGCCAAATTTCTTCTGATCTGCTCGCATCCGATCATACAC | + |
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Preference number: 5 (lower is better) Translates to: CILEFFHSLSSCCPR*FAKFLLICSHPIIH Trigger: GTGTATGATCGGATGCGAGCAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | CTCAGGGAGTCTAGAGAATGCAACTGTATCAATGTGCGTGCCCCCATGCCATGTGTAACAGAACACGGTTaGGGGTCAATACTAGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRESRECNCINVRAPMPCVTEHG*GSILVN Trigger: GTTGACTAGTATTGACCCCAAACCGTGTTCTGTTAC...ACATGGCATGGGGGCACGCACATTGATACAGTTGCATTCTCTAGACTCCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | TTTAGAAACTGCATACTGGAGTTTTTCCATTCGCTCAGCAGCTGCTaGCCACGATGCTTTGCCAAATTTCTTCTGATCTGCTCGCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: FRNCILEFFHSLSSC*PRCFAKFLLICSHP Trigger: CGGATGCGAGCAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTTTCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACAGGGCACTGGCCGACTTaGGGATGCTCCTCTCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTGHWPT*GCSSHC Trigger: GCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCC...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 90 bp | TCATCAGGAAAAGGAGGCAGAGTCCGCTGTTCAACCTTTTTCAGATaGAAGCTACCACGCTTCAAGGATGCTAACACTTCATCCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGKGGRVRCSTFFR*KLPRFKDANTSSMG Trigger: ACCCATGGATGAAGTGTTAGCATCCTTGAAGCGTGGTAGCTTTCATCTGAAAAAGGTTGAACAGCGGACTCTGCCTCCTTTTCCTGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | GCTGAAGTAAATACTGGTAGAGTTCAGTTGTGGCCTCTGCAAGGCTaGTGTAGGCTTCATCCTCCATCTGATACAAGTCCAAAAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AEVNTGRVQLWPLQG*CRLHPPSDTSPKAL Trigger: TAGAGCTTTTGGACTTGTATCAGATGGAGGATGAAGCCTACAGCAGCCTTGCAGAGGCCACAACTGAACTCTACCAGTATTTACTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 90 bp | CTCTTTAGAAACTGCATACTGGAGTTTTTCCATTCGCTCAGCAGCTaGTGCCCACGATGCTTTGCCAAATTTCTTCTGATCTGCTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFRNCILEFFHSLSS*CPRCFAKFLLICSH Trigger: ATGCGAGCAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTTTCTAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 90 bp | TCTTTAGCTCTCATCATCTGCAAAGTCTCTTTAGAAACTGCATACTaGAGTTTTTCCATTCGCTCAGCAGCTGCTGCCCACGATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLALIICKVSLETAY*SFSIRSAAAAHDAL Trigger: CAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTTTCTAAAGAGACTTTGCAGATGATGAGAGCTAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGCAGGTTATAGCAAACTaGCCTTCGATCTCGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSASGLPPTFKSFCLHMQVIAN*PSISFQ Trigger: CTGGAACGAGATCGAAGGCAAGTTTGCTATAACCTG...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | AAAAATACCATCGCCTCCTATTTCCAAGCAATTAGGCAGGATTTTAACATGCTCACTGGTAGAGTTCAGTaGTGGCCTCTGCAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNTIASYFQAIRQDFNMLTGRVQ*WPLQGC Trigger: GCAGCCTTGCAGAGGCCACAACTGAACTCTACCAGT...GAGCATGTTAAAATCCTGCCTAATTGCTTGGAAATAGGAGGCGATGGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 90 bp | CTTCGTGGATACTCCGTGTCAAAGGGTCGGTATCAGGCAGAAGTGTaGAGGATTCTCTCAAAACTTCCTTCTGAACCTTCTTCAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRGYSVSKGRYQAEV*RILSKLPSEPSSTL Trigger: TAAAGTTGAAGAAGGTTCAGAAGGAAGTTTTGAGAGAATCCTTCACACTTCTGCCTGATACCGACCCTTTGACACGGAGTATCCACGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTGCATCAGGACTGCCTCCTACCTTTAAAAGCTTCTGTTTACACATGTTCTCCATGGAAATCTaGATCTGCTGTCTTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSASGLPPTFKSFCLHMFSMEI*ICCLRS Trigger: GCTACGAAGACAGCAGATCAAGATTTCCATGGAGAA...CATGTGTAAACAGAAGCTTTTAAAGGTAGGAGGCAGTCCTGATGCAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 90 bp | ACAAATTTCTTTAGCTCTCATCATCTGCAAAGTCTCTTTAGAAACTaGATACTGGAGTTTTTCCATTCGCTCAGCAGCTGCTGCCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: TNFFSSHHLQSLFRN*ILEFFHSLSSCCPR Trigger: TCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTTTCTAAAGAGACTTTGCAGATGATGAGAGCTAAAGAAATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS-3UTR CAA 90 bp | ATACAGCCAGGTCAGCATTGGATCTACACATGTGAGTTTAAAGATTTAGTGACATCTGATATAAGTCTCTaGATGCTCTCCAGCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IQPGQHWIYTCEFKDLVTSDISL*MLSSCA Trigger: TGCACAGCTGGAGAGCATCAAGAGACTTATATCAGA...TGTCACTAAATCTTTAAACTCACATGTGTAGATCCAATGCTGACCTGGCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | TGCCCGCGGGACCCCGAGGAGGATCCCCCTTCAGGCTaGGCGCGCTGCGCGGAGAGCCGCCCTCGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPRDPEEDPPSG*ARCAESRPRPR Trigger: CCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCGCGCAGCCTGAAGGGGGATCCTCCTCGGGGTCCCGCGGGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | AGGCAGCGGCCTCTGACCGACCCCTGGCCGCGGGGCTaGCCGGACCGCGACTCCCATCAGACGCGGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQRPLTDPWPRG*PDRDSHQTRAS Trigger: GGACGCCCGCGTCTGATGGGAGTCGCGGTCCGGGCAGCCCCGCGGCCAGGGGTCGGTCAGAGGCCGCTGCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 72 bp | CGCGCGCTGCGCGGAGAGCCGCCCTCGGCCCAGGCCTaGCTTTTCCGTGGCCCGGGACTCCGGAGCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RALRGEPPSAQA*LFRGPGLRSAA Trigger: AGCAGCGCTCCGGAGTCCCGGGCCACGGAAAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | GACCCCGAGGAGGATCCCCCTTCAGGCTGCGCGCGCTaGGCGGAGAGCCGCCCTCGGCCCAGGCCTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DPEEDPPSGCAR*AESRPRPRPGF Trigger: AAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCGCGCAGCGCGCGCAGCCTGAAGGGGGATCCTCCTCGGGGTC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 72 bp | CGGAGAGCCGCCCTCGGCCCAGGCCTGGCTTTTCCGTaGCCCGGGACTCCGGAGCGCTGCTGTAGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRAALGPGLAFP*PGTPERCCSRG Trigger: GCCTCTGCTACAGCAGCGCTCCGGAGTCCCGGGCCACGGAAAAGCCAGGCCTGGGCCGAGGGCGGCTCTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | CTCGCAGATCCTGGAAGGAGAAAAGCCCGGCCCAGCTaGATTCTTCGGCCGGAGACTCCAGCTCCGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LADPGRRKARPS*ILRPETPAPRQ Trigger: CTGCCGCGGAGCTGGAGTCTCCGGCCGAAGAATGCAGCTGGGCCGGGCTTTTCTCCTTCCAGGATCTGCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | CCGTGCGCTGACCAGCTGGCTGCTATCAAAGAGGTGTaGTGCGGGGGCACTGGCCGACTTTGGGATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCADQLAAIKEV*CGGTGRLWDAP Trigger: AGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCTCTTTGATAGCAGCCAGCTGGTCAGCGCACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 72 bp | GCTGGCTGCTATCAAAGAGGTGTGCTGCGGGGGCACTaGCCGACTTTGGGATGCTCCTCTCATTGCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: AGCYQRGVLRGH*PTLGCSSHCPP Trigger: CGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCTCTTTGATAGCAGCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | ACACGGCCCCTTCTTGCTTCCAGCTGGCGTGCCTTCTaGTGCAGTTTCTGTAGCTCTTCCCTCTGGGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: TRPLLASSWRAF*CSFCSSSLWAC Trigger: GCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAAGGCACGCCAGCTGGAAGCAAGAAGGGGCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 72 bp | AACACAAACTTGTGCTTCTCGCGCTCGTCGAATACGTaGGGCCGCACCGCCACCCAGTCGGACTCGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NTNLCFSRSSNT*GRTATQSDSSV Trigger: GACACTCGAGTCCGACTGGGTGGCGGTGCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS TCA 72 bp | CACGGCTCCAGCTGGGAGTTTACCGAGCACAGCTGCTaGTGCACGGCTCGCAGATCCTGGAAGGAGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: HGSSWEFTEHSC*CTARRSWKEKS Trigger: GCTTTTCTCCTTCCAGGATCTGCGAGCCGTGCATCAGCAGCTGTGCTCGGTAAACTCCCAGCTGGAGCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 72 bp | TCTTGTGCTTGTCCAAGAGCTCCTGGATGCGCCTCCTaGCCCGCTGAAGCACCTCTTCATAGCCCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SCACPRAPGCAS*PAEAPLHSPSA Trigger: GGCAGAAGGGCTATGAAGAGGTGCTTCAGCGGGCCAGGAGGCGCATCCAGGAGCTCTTGGACAAGCACAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 72 bp | ATCAAAGAGGTGTGCTGCGGGGGCACTGGCCGACTTTaGGATGCTCCTCTCATTGCCCTCCGTCCTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: IKEVCCGGTGRL*DAPLIALRPKC Trigger: GCACTTAGGACGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCTCTTTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 72 bp | GCGGGGGCACTGGCCGACTTTGGGATGCTCCTCTCATaGCCCTCCGTCCTAAGTGCATCTTTCTCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AGALADFGMLLS*PSVLSASFSSV Trigger: GACACTGGAGAAAGATGCACTTAGGACGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 90 bp | AGGTGTGCTGCGGGGGCACTGGCCGACTTTGGGATGCTCCTCTCATaGCCCTCCGTCCTAAGTGCATCTTTCTCCAGTGTCTCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RCAAGALADFGMLLS*PSVLSASFSSVSAV Trigger: CACTGCAGAGACACTGGAGAAAGATGCACTTAGGACGGAGGGCAATGAGAGGAGCATCCCAAAGTCGGCCAGTGCCCCCGCAGCACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 90 bp | GCAAACTTGCCTTCGATCTCGTTCCAGGCCACAATGAACACAAACTaGTGCTTCTCGCGCTCGTCGAATACGTGGGGCCGCACCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: ANLPSISFQATMNTN*CFSRSSNTWGRTAT Trigger: GGTGGCGGTGCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGTGGCCTGGAACGAGATCGAAGGCAAGTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CCA 72 bp | CGTGCCTTCTGCTGCAGTTTCTGTAGCTCTTCCCTCTaGGCGTGCACAGACGCTGCCATCTCTTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RAFCCSFCSSSL*ACTDAAISSFS Trigger: GGAGAAGGAAGAGATGGCAGCGTCTGTGCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAAGGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 72 bp | CGGGAACCGCTCCTCTGTCTCTGGGCCGTCCGGTTGTaGCAGGTTATAGCAAACTTGCCTTCGATCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: REPLLCLWAVRL*QVIANLPSISF Trigger: GAACGAGATCGAAGGCAAGTTTGCTATAACCTGTCACAACCGGACGGCCCAGAGACAGAGGAGCGGTTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | TCGATCTCGTTCCAGGCCACAATGAACACAAACTTGTaGTTCTCGCGCTCGTCGAATACGTGGGGCCGCACC | + |
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Preference number: 6 (lower is better) Translates to: SISFQATMNTNL*FSRSSNTWGRT Trigger: GGTGCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGTGGCCTGGAACGAGATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CAA 72 bp | CCTTCGATCTCGTTCCAGGCCACAATGAACACAAACTaGTGCTTCTCGCGCTCGTCGAATACGTGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSISFQATMNTN*CFSRSSNTWGR Trigger: GCGGCCCCACGTATTCGACGAGCGCGAGAAGCACAAGTTTGTGTTCATTGTGGCCTGGAACGAGATCGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS TCA 72 bp | GAAGCACCTCTTCATAGCCCTTCTGCCGCAGCTCGCTaGGGCTTTCGTAATACTCCTCCGGATCATCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: EAPLHSPSAAAR*GFRNTPPDHPS Trigger: AGACGGATGATCCGGAGGAGTATTACGAAAGCCTCAGCGAGCTGCGGCAGAAGGGCTATGAAGAGGTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | TTCTGCTGCAGTTTCTGTAGCTCTTCCCTCTGGGCGTaGACAGACGCTGCCATCTCTTCCTTCTCCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: FCCSFCSSSLWA*TDAAISSFSSM Trigger: CATGCTGGAGAAGGAAGAGATGGCAGCGTCTGTGCACGCCCAGAGGGAAGAGCTACAGAAACTGCAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | CTGCAGCCCTTCCACAGTCTTTCTGAGCTTTTTCCGTaGGCTGACCAGCTGGCTGCTATCAAAGAGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LQPFHSLSELFP*ADQLAAIKEVC Trigger: GCACACCTCTTTGATAGCAGCCAGCTGGTCAGCGCACGGAAAAAGCTCAGAAAGACTGTGGAAGGGCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 90 bp | GCACTGTTGGCAGAGAGTGACACTGCTCCTCACAGGGCACAGGGCTaGCTGTGCTTTTTCTTCTTGAATGCGCCACTCGTAATCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: ALLAESDTAPHRAQG*LCFFFLNAPLVIWS Trigger: CGACCAGATTACGAGTGGCGCATTCAAGAAGAAAAAGCACAGCAAGCCCTGTGCCCTGTGAGGAGCAGTGTCACTCTCTGCCAACAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 72 bp | TCCAAAAGCTCTACCATGCTTTCTATAGTCTTGTGCTaGTCCAAGAGCTCCTGGATGCGCCTCCTGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SKSSTMLSIVLC*SKSSWMRLLAR Trigger: GCGGGCCAGGAGGCGCATCCAGGAGCTCTTGGACAAGCACAAGACTATAGAAAGCATGGTAGAGCTTTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS CAA 90 bp | GGAGGAAGAGGGGGTGGGAGAGGATCTATAGTAACAGAACACGGTTaGGGGTCAATACTAGTCAACAGTGGAGCTGACTGTGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGRGGGRGSIVTEHG*GSILVNSGADCGGG Trigger: GCCTCCTCCACAGTCAGCTCCACTGTTGACTAGTATTGACCCCAAACCGTGTTCTGTTACTATAGATCCTCTCCCACCCCCTCTTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | GAGTTTTTCCATTCGCTCAGCAGCTGCTGCCCACGATaGTTTGCCAAATTTCTTCTGATCTGCTCGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: EFFHSLSSCCPR*FAKFLLICSHP Trigger: CGGATGCGAGCAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 72 bp | GCCTCTTCCTCATCCTCTGACTCTGGGGACGCTTCTTaGATTCTTCTTAGAGCTTCGTGGATACTCCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASSSSSDSGDAS*ILLRASWILRV Trigger: GACACGGAGTATCCACGAAGCTCTAAGAAGAATCAAAGAAGCGTCCCCAGAGTCAGAGGATGAGGAAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 72 bp | CCTCTTCCTCATCCTCTGACTCTGGGGACGCTTCTTTaGTTCTTCTTAGAGCTTCGTGGATACTCCGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLPHPLTLGTLL*FFLELRGYSVS Trigger: TGACACGGAGTATCCACGAAGCTCTAAGAAGAATCAAAGAAGCGTCCCCAGAGTCAGAGGATGAGGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | TGCGCCACTCGTAATCTGGTCGACTTAAGGATGACTTaGCCGGGGTACCTCTGCTTAAATGTTCGAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: CATRNLVDLRMT*PGYLCLNVRSL Trigger: TAGACTTCGAACATTTAAGCAGAGGTACCCCGGGCAAGTCATCCTTAAGTCGACCAGATTACGAGTGGCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 72 bp | TCTGGGGACGCTTCTTTGATTCTTCTTAGAGCTTCGTaGATACTCCGTGTCAAAGGGTCGGTATCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGDASLILLRAS*ILRVKGSVSGR Trigger: TCTGCCTGATACCGACCCTTTGACACGGAGTATCCACGAAGCTCTAAGAAGAATCAAAGAAGCGTCCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CAA 72 bp | GGGGGTGGGAGAGGATCTATAGTAACAGAACACGGTTaGGGGTCAATACTAGTCAACAGTGGAGCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: GGGRGSIVTEHG*GSILVNSGADC Trigger: ACAGTCAGCTCCACTGTTGACTAGTATTGACCCCAAACCGTGTTCTGTTACTATAGATCCTCTCCCACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | AATACTGGTAGAGTTCAGTTGTGGCCTCTGCAAGGCTaGTGTAGGCTTCATCCTCCATCTGATACAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: NTGRVQLWPLQG*CRLHPPSDTSP Trigger: TGGACTTGTATCAGATGGAGGATGAAGCCTACAGCAGCCTTGCAGAGGCCACAACTGAACTCTACCAGTATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065537.9 ENSMUST00000220513.2 |
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| CDS GCA 72 bp | TGCATACTGGAGTTTTTCCATTCGCTCAGCAGCTGCTaGCCACGATGCTTTGCCAAATTTCTTCTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: CILEFFHSLSSC*PRCFAKFLLIC Trigger: GCAGATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 72 bp | GTGGATTCAAGTTGTTCTGATGAAGTGTCTTCAAGTTaGACAAGGCTCTGGGGTTCTGCTGTCTGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VDSSCSDEVSSS*TRLWGSAVCEG Trigger: GCCTTCACAGACAGCAGAACCCCAGAGCCTTGTCCAACTTGAAGACACTTCATCAGAACAACTTGAATCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS GCA 72 bp | AACTGCATACTGGAGTTTTTCCATTCGCTCAGCAGCTaGTGCCCACGATGCTTTGCCAAATTTCTTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: NCILEFFHSLSS*CPRCFAKFLLI Trigger: GATCAGAAGAAATTTGGCAAAGCATCGTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS CCA 72 bp | CTCATCATCTGCAAAGTCTCTTTAGAAACTGCATACTaGAGTTTTTCCATTCGCTCAGCAGCTGCTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LIICKVSLETAY*SFSIRSAAAAH Trigger: GTGGGCAGCAGCTGCTGAGCGAATGGAAAAACTCCAGTATGCAGTTTCTAAAGAGACTTTGCAGATGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 72 bp | AAAGGAGGCAGAGTCCGCTGTTCAACCTTTTTCAGATaGAAGCTACCACGCTTCAAGGATGCTAACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: KGGRVRCSTFFR*KLPRFKDANTS Trigger: TGAAGTGTTAGCATCCTTGAAGCGTGGTAGCTTTCATCTGAAAAAGGTTGAACAGCGGACTCTGCCTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 72 bp | TACTCCGTGTCAAAGGGTCGGTATCAGGCAGAAGTGTaGAGGATTCTCTCAAAACTTCCTTCTGAACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YSVSKGRYQAEV*RILSKLPSEPS Trigger: AGAAGGTTCAGAAGGAAGTTTTGAGAGAATCCTTCACACTTCTGCCTGATACCGACCCTTTGACACGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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| CDS TCA 72 bp | GGCAGAAGTGTGAAGGATTCTCTCAAAACTTCCTTCTaGACCTTCTTCAACTTTACCCCTTTCCTTATCTGC | + |
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Preference number: 6 (lower is better) Translates to: GRSVKDSLKTSF*TFFNFTPFLIC Trigger: GCAGATAAGGAAAGGGGTAAAGTTGAAGAAGGTTCAGAAGGAAGTTTTGAGAGAATCCTTCACACTTCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065537.9 |
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