Pregenerated sensors for JMJD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025736Ensembl transcript IDs: ENSMUST00000026832.14, ENSMUST00000133595.9, ENSMUST00000152434.9
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCCATTGAACACTCTTGACTCTGTTGCAGCGTGTGGGCCACTTTaGCCCTGTGACCCGGAGCCCTCTGACCCAGGAACAGCTCATCCC | + |
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Preference number: 1 (lower is better) Translates to: RPLNTLDSVAACGPL*PCDPEPSDPGTAHP Trigger: GGGATGAGCTGTTCCTGGGTCAGAGGGCTCCGGGTCACAGGGTCAAAGTGGCCCACACGCTGCAACAGAGTCAAGAGTGTTCAATGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR TCA 90 bp | GAAGGACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTaGGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGGCCATCACCA | + |
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Preference number: 1 (lower is better) Translates to: EGQQPVHGKPRRKEA*DGAGSVISWSGPSP Trigger: TGGTGATGGCCCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGTCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR CCA 90 bp | CATTGTGTGTGTGTTTGTGTGTGGCATGAAAAGTGCCCCAGCCTTTaGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: HCVCVCVWHEKCPSL*WICWPMHDMSALVD Trigger: GTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCTGGGGCACTTTTCATGCCACACACAAACACACACACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR CCA 90 bp | CTACATTGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTaGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATT | + |
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Preference number: 1 (lower is better) Translates to: LHWHVLVQWACQLPV*LAKEGRNEDTGVQI Trigger: AATCTGGACACCAGTGTCTTCATTTCTACCTTCCTTGGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACATGCCAATGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| 3UTR TCA 90 bp | AGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCTaGTGCGGGAACCCTGCATTACACCCAGTGGTATCACCTATGACC | + |
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Preference number: 1 (lower is better) Translates to: SEISLTTCVARLALS*CGNPALHPVVSPMT Trigger: GGTCATAGGTGATACCACTGGGTGTAATGCAGGGTTCCCGCATCAGCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR CCA 90 bp | GGACAGAGTGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATaGCACTCAACTCTGCAGGATAAATACATGGCAGATATGGATGAG | + |
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Preference number: 1 (lower is better) Translates to: GQSVCVCVETGVAHT*HSTLQDKYMADMDE Trigger: CTCATCCATATCTGCCATGTATTTATCCTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACACTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR GCA 90 bp | AGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATaGCACCACCGATCAGGAAAATACAGTACTTCACCAGCCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: RKVEMKTLVSRLSVA*HHRSGKYSTSPAWM Trigger: CATCCAGGCTGGTGAAGTACTGTATTTTCCTGATCGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTCGTCCCCCTTCTGGGCTaGAGAGTGGGTGAGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLGLPPSALLMGSELLPFVPLLG*RVGEGG Trigger: CCCACCCTCACCCACTCTCCAGCCCAGAAGGGGGAC...GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGGCGTGTGGGCCACTTTaGCCCTGTGACCCGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TTTGTWEAQEERGLRWGGACGPL*PCDPEP Trigger: GGGCTCCGGGTCACAGGGTCAAAGTGGCCCACACGC...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGAGGAGGAAAGAGGCCTaGGATGGGGCGGGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: AQEERGLRWGGLCDFLVRRRKEA*DGAGSV Trigger: CACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCT...CCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | CGGCTGGGTAGAGGACTATTGAGGCCCCATGTCCTGCCTGGCACCCTGGCCCAGATTGGCATGTGCTGGTaGAGTGGGCTTGCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: RLGRGLLRPHVLPGTLAQIGMCW*SGLASC Trigger: GCAACTGGCAAGCCCACTGCACCAGCACATGCCAAT...CTGGGCCAGGGTGCCAGGCAGGACATGGGGCCTCAATAGTCCTCTACCCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | CGGCTGGGTAGAGGACTATTGAGGCCCCATGTCCTGCCTGGCACCCTGGCCCAGCACTACATTGGCATGTaGTGGTGCAGTGGGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RLGRGLLRPHVLPGTLAQHYIGM*WCSGLA Trigger: GGCAAGCCCACTGCACCAGCACATGCCAATGTAGTG...CTGGGCCAGGGTGCCAGGCAGGACATGGGGCCTCAATAGTCCTCTACCCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATGTCCCCCTTCTGGGCTaGAGAGTGGGTGAGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WRRKLQSLYSLCPWACPHVPLLG*RVGEGG Trigger: CCCACCCTCACCCACTCTCCAGCCCAGAAGGGGGAC...ATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCCCTTGTCCCCCTTCTaGGCTGGAGAGTGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TTTGTWEAQEERGLRWGGPLSPF*AGEWVR Trigger: CCTCACCCACTCTCCAGCCCAGAAGGGGGACAAGGG...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGTATAGTTTGTGTCCCTaGGCCTGCCCCCATCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: AQEERGLRWGGLCDFLVRYSLCP*ACPHRP Trigger: GGGCCGATGGGGGCAGGCCCAGGGACACAAACTATA...CCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCGAGAGAGGTGGGTCCCTCCCCCAGCAGACACTGAGTCACCAGCACAAGTGCCTGCTGATGGGTTCTaGACTGCTCCCCTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ERERWVPPPADTESPAQVPADGF*TAPLLS Trigger: GCTGAGAAGGGGAGCAGTTCAGAACCCATCAGCAGG...CACTTGTGCTGGTGACTCAGTGTCTGCTGGGGGAGGGACCCACCTCTCTCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTCCTTCACCAGCCTGGATaGTACATTCTAGAGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: SLGLPPSALLMGSELLPFLHQPG*YILEAV Trigger: CACGGCCTCTAGAATGTACCATCCAGGCTGGTGAAG...GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCAGGAGGAAAGAGGCCTaGGATGGGGCGGGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SGNWRSVSGTTRVMKMMARRKEA*DGAGSV Trigger: CACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCT...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCATTGGCATGTGCTGGTaGAGTGGGCTTGCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: KLQSLYSLCPWACPHRPCIGMCW*SGLASC Trigger: GCAACTGGCAAGCCCACTGCACCAGCACATGCCAAT...GCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGTGGACAGAGTGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGTCCTGCCTGGCACCCTaGCCCAGGAGGATCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PWWTECVCLCGDRSCPHMSCLAP*PRRIWR Trigger: TCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGA...CATGTGTGGGCAACTCCTGTCTCCACACAGACACACACACTCTGTCCACCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGCCCCATGTCCTGCCTaGCACCCTGGCCCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: CVCLCGDRSCPHMALNSAAPCPA*HPGPGG Trigger: TCCTCCTGGGCCAGGGTGCCAGGCAGGACATGGGGC...TGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGTGGACAGAGTGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGGTAAGGAGGGCCCATaGAGACCGGGCCATGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PWWTECVCLCGDRSCPHMGKEGP*RPGHGE Trigger: CTCTCCATGGCCCGGTCTCCATGGGCCCTCCTTACC...CATGTGTGGGCAACTCCTGTCTCCACACAGACACACACACTCTGTCCACCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGGAAAGAGGCCTGAGATaGGGCGGGCTCTGTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: AQEERGLRWGGLCDFLVRERGLR*GGLCDF Trigger: GAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTC...CCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCGGCCCATGCATGACATaGGTGCCCTGGTGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAGPCMT*VPWWTE Trigger: CTCTGTCCACCAGGGCACTCATGTCATGCATGGGCC...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGTCCCCCTTCTGGGCTaGAGAGTGGGTGAGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CVCLCGDRSCPHMALNSAVPLLG*RVGEGG Trigger: CCCACCCTCACCCACTCTCCAGCCCAGAAGGGGGAC...TGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGGGTAAGGAGGGCCCATaGAGACCGGGCCATGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VCVCVETGVAHTWHSTLQGKEGP*RPGHGE Trigger: CTCTCCATGGCCCGGTCTCCATGGGCCCTCCTTACC...CTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGTGCCCCAGCCTTTGGTaGATCTGTTGGCCCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: TTTGTWEAQEERGLRWGGCPSLW*ICWPMH Trigger: ATGCATGGGCCAACAGATCCACCAAAGGCTGGGGCA...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCTGGGTAGAGGACTATTaGGGCCCCATGTCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAWVEDY*GPMSCL Trigger: CAGGCAGGACATGGGGCCTCAATAGTCCTCTACCCA...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTCCCTTGTCCCCCTTCTaGGCTGGAGAGTGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCPLSPF*AGEWVR Trigger: CCTCACCCACTCTCCAGCCCAGAAGGGGGACAAGGG...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGGCATTCCTGCCTGGCACCCTaGCCCAGGAGGATCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: EGAPSPHVGHCVCVCVWHSCLAP*PRRIWR Trigger: TCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGA...ATGCCACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTGGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGACAGACTCATCGGCTGCTGCTaGTATGGTGACCCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: SLWWICWPMHDMSALVDRLIGCC*YGDPHS Trigger: GCTGTGGGGGTCACCATACCAGCAGCAGCCGATGAG...TCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | GGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATGGAGTTGCCCACACATaGCACTCAACTCTGCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GTWEAQEERGLRWGGLCDGVAHT*HSTLQD Trigger: ATCCTGCAGAGTTGAGTGCCATGTGTGGGCAACTCC...ATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACGGCCCATGCATGACATaGGTGCCCTGGTGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNGPCMT*VPWWTE Trigger: CTCTGTCCACCAGGGCACTCATGTCATGCATGGGCC...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACCTCATCGGCTGCTGCTaGTATGGTGACCCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNLIGCC*YGDPHS Trigger: GCTGTGGGGGTCACCATACCAGCAGCAGCCGATGAG...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGTCTCAGCATACCCCTTaGTGGACCATGAGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVETGVAHTWHSTLQSQHTP*WTMSLP Trigger: AGGGAGGCTCATGGTCCAGCAAGGGGTATGCTGAGA...CTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTCTGGTGCAGTGGGCTTaGCAGTTGCCTGTCTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCLVQWA*QLPVWL Trigger: TAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAG...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| 3UTR CAA 90 bp | TGCTGCTGCTGCCACTGTCCTGTAATAAAGTCTGTGAGCACTACATaGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: CCCCHCPVIKSVSTT*ACAGAVGLPVACLA Trigger: AGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACATGCCAATGTAGTGCTCACAGACTTTATTACAGGACAGTGGCAGCAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAATTGGCATGTGCTGGTaGAGTGGGCTTGCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CVCLCGDRSCPHMALNSAIGMCW*SGLASC Trigger: GCAACTGGCAAGCCCACTGCACCAGCACATGCCAAT...TGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCGAGAGAGGTGGGTCCCTCCCCCAGCAGACACTGAGTCACCAGCACAAGTGGACATTTTCCCCTTGTaGTATAGAAGCGAGATATCC | + |
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Preference number: 2 (lower is better) Translates to: ERERWVPPPADTESPAQVDIFPL*YRSEIS Trigger: GGATATCTCGCTTCTATAGCACAAGGGGAAAATGTC...CACTTGTGCTGGTGACTCAGTGTCTGCTGGGGGAGGGACCCACCTCTCTCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| 3UTR CAA 90 bp | GTCCCTCCCCCAGCAGACACTGAGTCACCAGCACAAGTGTTTTTATaGAAGGACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VPPPADTESPAQVFL*KDNNRYMGSPGGKR Trigger: CCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGTCCTTCAATAAAAACACTTGTGCTGGTGACTCAGTGTCTGCTGGGGGAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCGAAGCGAGATATCCCTaGCTACTTGTGTGGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAEARYP*LLVWQD Trigger: ATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTC...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGCACAAGTGTTTTTATTaGAGGACAACAACCGGTACA | + |
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Preference number: 2 (lower is better) Translates to: AQEERGLRWGGLCDFLVRHKCFY*RTTTGT Trigger: TGTACCGGTTGTTGTCCTTCAATAAAAACACTTGTG...CCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR-3UTR CCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACGTGTGTGTGTCTGTGTaGAGACAGGAGTTGCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNVCVSV*RQELPT Trigger: TGTGGGCAACTCCTGTCTCCACACAGACACACACAC...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR TCA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTTGTTTGTGTGTGGCATaGAAAGTGCCCCAGCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCCLCVA*KVPQPL Trigger: CAAAGGCTGGGGCACTTTTCATGCCACACACAAACA...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACAGATTAGCTTTGAGCTaGTGCGGGAACCCTGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNRLALS*CGNPAL Trigger: TAATGCAGGGTTCCCGCATCAGCTCAAAGCTAATCT...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGGCATGAAGCGAGATATCCCTaGCTACTTGTGTGGCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EGAPSPHVGHCVCVCVWHEARYP*LLVWQD Trigger: ATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTC...ATGCCACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTTTGGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGACAGACATGGCACTCAACTCTaGAGGATAAATACATGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLWWICWPMHDMSALVDRHGTQL*RINTWQ Trigger: CTGCCATGTATTTATCCTGCAGAGTTGAGTGCCATG...TCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCTATAGTTTGTGTCCCTaGGCCTGCCCCCATCGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CYRSEISLTTCVARLALSYSLCP*ACPHRP Trigger: GGGCCGATGGGGGCAGGCCCAGGGACACAAACTATA...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACCCCCTAGTCCACATGTaGGTCATTGTGTGTGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNPLVHM*VIVCVF Trigger: AAACACACACACAATGACCCACATGTGGACTAGGGG...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTTCACCAACTAGCTTCTaGTTAACCCTCAGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCSPTSF*LTLREL Trigger: CAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCCCTGCTGATGGGTTCTaGACTGCTCCCCTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CYRSEISLTTCVARLALSPADGF*TAPLLS Trigger: GCTGAGAAGGGGAGCAGTTCAGAACCCATCAGCAGG...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR GCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACCATGGCACTCAACTCTaGAGGATAAATACATGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPTSFWLTLRELEECQRNHGTQL*RINTWQ Trigger: CTGCCATGTATTTATCCTGCAGAGTTGAGTGCCATG...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR GCA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTCATGGCACTCAACTCTaGAGGATAAATACATGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCHGTQL*RINTWQ Trigger: CTGCCATGTATTTATCCTGCAGAGTTGAGTGCCATG...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTCTCTGTGAGCACTACATaGGCATGTGCTGGTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLGLPPSALLMGSELLPFSVSTT*ACAGAV Trigger: CACTGCACCAGCACATGCCAATGTAGTGCTCACAGA...GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCAGTCCCTGTATAGTTaGTGTCCCTGGGCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TTTGTWEAQEERGLRWGGQSLYS*CPWACP Trigger: GGGGCAGGCCCAGGGACACAAACTATACAGGGACTG...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATCAGTCCCTGTATAGTTaGTGTCCCTGGGCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GTWEAQEERGLRWGGLCDQSLYS*CPWACP Trigger: GGGGCAGGCCCAGGGACACAAACTATACAGGGACTG...ATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | AGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTaGTGGGTTCTGAACTGCTCCCCTTCTCAGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: SLCPWACPHRPC*WVLNCSPSQHT Trigger: GGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | CAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTaGGATGGGGCGGGCTCTGTGATTTCCTGGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPVHGKPRRKEA*DGAGSVISWSG Trigger: CCCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | GGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATaGGGCGGGCTCTGTGATTTCCTGGTCAGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GTWEAQEERGLR*GGLCDFLVRAI Trigger: GATGGCCCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGTCTGTGAGCACTACATaGGCATGTGCTGGTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTTGTWEAQEERGLRWGGSVSTT*ACAGAV Trigger: CACTGCACCAGCACATGCCAATGTAGTGCTCACAGA...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGACCATGAGCCTCCCTaGTCCCCCTTCTGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCDHEPP*SPFWAG Trigger: TCCAGCCCAGAAGGGGGACAAGGGAGGCTCATGGTC...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCTTCTCAGCATACCCCTaGCTGGACCATGAGCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAFSAYP*LDHEPP Trigger: GGGAGGCTCATGGTCCAGCAAGGGGTATGCTGAGAA...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | AACACTCTTGACTCTGTTGCAGCGTGTGGGCCACTTTaGCCCTGTGACCCGGAGCCCTCTGACCCAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: NTLDSVAACGPL*PCDPEPSDPGT Trigger: TGTTCCTGGGTCAGAGGGCTCCGGGTCACAGGGTCAAAGTGGCCCACACGCTGCAACAGAGTCAAGAGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | GTGCCCCAGCCTTTGGTGGATCTGTTGGCCCATGCATaGCATGAGTGCCCTGGTGGACAGAGTGTGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VPQPLVDLLAHA*HECPGGQSVCV Trigger: GACACACACACTCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCTGGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | CCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTaGTTTCCTGGTCAGGGCCATCACCAACTAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGGKRPEMGRAL*FPGQGHHQLAS Trigger: AGAAGCTAGTTGGTGATGGCCCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCAAAGTGCCCCAGCCTTaGGTGGATCTGTTGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAKVPQP*VDLLAH Trigger: ATGGGCCAACAGATCCACCAAAGGCTGGGGCACTTT...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACGTGTGGAGACAGGAGTaGCCCACACATGGCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTSFWLTLRELEECQRNVWRQE*PTHGTQ Trigger: TTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACAC...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACAAAGTGCCCCAGCCTTaGGTGGATCTGTTGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPTSFWLTLRELEECQRNKVPQP*VDLLAH Trigger: ATGGGCCAACAGATCCACCAAAGGCTGGGGCACTTT...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | TACCCGGATCGGTATACTCAGGCCATTGAACACTCTTaGCTCTGTTGCAGCGTGTGGGCCACTTTGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YPDRYTQAIEHS*LCCSVWATLTL Trigger: CAGGGTCAAAGTGGCCCACACGCTGCAACAGAGTCAAGAGTGTTCAATGGCCTGAGTATACCGATCCGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | GTTTGTGTGTGGCATGAAAAGTGCCCCAGCCTTTGGTaGATCTGTTGGCCCATGCATGACATGAGTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VCVWHEKCPSLW*ICWPMHDMSAL Trigger: CAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCTGGGGCACTTTTCATGCCACACACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | CATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTaGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HVLVQWACQLPV*LAKEGRNEDTG Trigger: ACCAGTGTCTTCATTTCTACCTTCCTTGGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAACCGGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGGATATCCCTGACTACTaGTGTGGCAAGATTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TTTGTWEAQEERGLRWGGDIPDY*CGKISF Trigger: AAAGCTAATCTTGCCACACAAGTAGTCAGGGATATC...CCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACCGGTTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR GCA 72 bp | TCCTGTAATAAAGTCTGTGAGCACTACATTGGCATGTaGTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SCNKVCEHYIGM*WCSGLASCLSG Trigger: GCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACATGCCAATGTAGTGCTCACAGACTTTATTACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | TGTGTTTGTGTGTGGCATGAAAAGTGCCCCAGCCTTTaGTGGATCTGTTGGCCCATGCATGACATGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVWHEKCPSL*WICWPMHDMSA Trigger: GGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCTGGGGCACTTTTCATGCCACACACAAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | CACCACCGATCAGGAAAATACAGTACTTCACCAGCCTaGATGGTACATTCTAGAGGCCGTGCTGACAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HHRSGKYSTSPA*MVHSRGRADRA Trigger: AGCCCTGTCAGCACGGCCTCTAGAATGTACCATCCAGGCTGGTGAAGTACTGTATTTTCCTGATCGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCGACCATGAGCCTCCCTaGTCCCCCTTCTGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CYRSEISLTTCVARLALSDHEPP*SPFWAG Trigger: TCCAGCCCAGAAGGGGGACAAGGGAGGCTCATGGTC...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCGATATCCCTGACTACTaGTGTGGCAAGATTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGNWRSVSGTTRVMKMMADIPDY*CGKISF Trigger: AAAGCTAATCTTGCCACACAAGTAGTCAGGGATATC...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR CCA 72 bp | ACCGATCAGGAAAATACAGTACTTCACCAGCCTGGATaGTACATTCTAGAGGCCGTGCTGACAGGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TDQENTVLHQPG*YILEAVLTGLE Trigger: CTCTAGCCCTGTCAGCACGGCCTCTAGAATGTACCATCCAGGCTGGTGAAGTACTGTATTTTCCTGATCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | TCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCTaGTGCGGGAACCCTGCATTACACCCAGTGGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SLTTCVARLALS*CGNPALHPVVS Trigger: TGATACCACTGGGTGTAATGCAGGGTTCCCGCATCAGCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR TCA 72 bp | CAGCAGACACTGAGTCACCAGCACAAGTGTTTTTATTaGAGGACAACAACCGGTACATGGGAAGCCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQTLSHQHKCFY*RTTTGTWEAQE Trigger: CTCCTGGGCTTCCCATGTACCGGTTGTTGTCCTTCAATAAAAACACTTGTGCTGGTGACTCAGTGTCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCACTAGACATTTTCCCCTaGTGCTATAGAAGCGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: CVCLCGDRSCPHMALNSALDIFP*CYRSEI Trigger: TATCTCGCTTCTATAGCACAAGGGGAAAATGTCTAG...TGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGTGAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTCTAGACATTTTCCCCTaGTGCTATAGAAGCGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: HVRVPLVHMWVIVCVFVCLDIFP*CYRSEI Trigger: TATCTCGCTTCTATAGCACAAGGGGAAAATGTCTAG...ACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTCACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR GCA 72 bp | TGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTaGAGGATAAATACATGGCAGATATGGATGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WRQELPTHGTQL*RINTWQIWMSS Trigger: AGAGCTCATCCATATCTGCCATGTATTTATCCTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| 3UTR GCA 72 bp | GAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATaGCACCACCGATCAGGAAAATACAGTACTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: EMKTLVSRLSVA*HHRSGKYSTSP Trigger: TGGTGAAGTACTGTATTTTCCTGATCGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTCCTCCTCCTCCATTACTaGTGCTGCAATTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLPPSALLMGSELLPFLLLHY*CCNSQP Trigger: GGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAG...GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | GAGCGAGAGAGGTGGGTCCCTCCCCCAGCAGACACTGAGTCACCAGCACAAGTGCCCGACGCTCCACTGTaGAACGCTCCTCCTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ERERWVPPPADTESPAQVPDAPL*NAPPPL Trigger: TAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGG...CACTTGTGCTGGTGACTCAGTGTCTGCTGGGGGAGGGACCCACCTCTCTCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS-3UTR GCA 90 bp | CGGCTGGGTAGAGGACTATTGAGGCCCCATGTCCTGCCTGGCACCCTGGCCCAGCCCAGATCCAGCTCCTaGAATTCCAAAGCTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGRGLLRPHVLPGTLAQPRSSS*NSKAVS Trigger: GCTTACAGCTTTGGAATTGCAGGAGCTGGATCTGGG...CTGGGCCAGGGTGCCAGGCAGGACATGGGGCCTCAATAGTCCTCTACCCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | TCATCGGCTGCTGCTGGTATGGTGACCCCCACAGCCCCCTCCAGTTCTAGACATGAGAAACCAGGCCCATaGCAGTGGAAGGGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAAAGMVTPTAPSSSRHEKPGP*QWKGTP Trigger: TGGGGTACCCTTCCACTGGCATGGGCCTGGTTTCTC...ATGTCTAGAACTGGAGGGGGCTGTGGGGGTCACCATACCAGCAGCAGCCGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | GAGCGAGAGAGGTGGGTCCCTCCCCCAGCAGACACTGAGTCACCAGCACAAGTGAGTACAGGGTGTCATTaGCTAGGGATGCAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERERWVPPPADTESPAQVSTGCH*LGMQDP Trigger: AGGATCCTGCATCCCTAGGCAATGACACCCTGTACT...CACTTGTGCTGGTGACTCAGTGTCTGCTGGGGGAGGGACCCACCTCTCTCGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCGAGAAACCAGGCCCATaGCAGTGGAAGGGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNWRSVSGTTRVMKMMAEKPGP*QWKGTP Trigger: TGGGGTACCCTTCCACTGGCATGGGCCTGGTTTCTC...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS-3UTR GCA 90 bp | GGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATCTCCATTACTGCTGCTaGAATTCCCAGCCCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTWEAQEERGLRWGGLCDLHYCC*NSQPIL Trigger: CAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAG...ATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGACAGAGTGCCCGACGCTCCACTGTaGAACGCTCCTCCTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LWWICWPMHDMSALVDRVPDAPL*NAPPPL Trigger: TAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGG...CACTCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCGGTAGGAGTAGGTGTTaGCTGTACTCAAGCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQSLYSLCPWACPHRPCGRSRC*LYSSEQ Trigger: TTGTTCGCTTGAGTACAGCCAACACCTACTCCTACC...GCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTGGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGACAGACTCCTCCTCCATTACTaGTGCTGCAATTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWWICWPMHDMSALVDRLLLHY*CCNSQP Trigger: GGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAG...TCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCTTGTCCGTGAGTCCTTaGAAGATGACGGGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNWRSVSGTTRVMKMMALSVSP*KMTGLR Trigger: CCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAA...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGGTCATGAAGATGATGGCCCTCCTCCATTACTGCTaGTGCAATTCCCAGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SGNWRSVSGTTRVMKMMALLHYC*CNSQPI Trigger: AATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAG...GGCCATCATCTTCATGACCCTCGTGGTTCCGCTGACACTCCTCCAGTTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGTGGACAGAGTGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGTGCTGGAAGAGGGATaGCCACTCAGTGAAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PWWTECVCLCGDRSCPHMVLEEG*PLSEVV Trigger: AACAACTTCACTGAGTGGGCATCCCTCTTCCAGCAC...CATGTGTGGGCAACTCCTGTCTCCACACAGACACACACACTCTGTCCACCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCCTCCCTTGCCCAGATCCAGCTCCTaGAATTCCAAAGCTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SELLPFSAYPLLDHEPPLPRSSS*NSKAVS Trigger: GCTTACAGCTTTGGAATTGCAGGAGCTGGATCTGGG...CAAGGGAGGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATGGTAGGAGTAGGTGTTaGCTGTACTCAAGCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: WRRKLQSLYSLCPWACPHGRSRC*LYSSEQ Trigger: TTGTTCGCTTGAGTACAGCCAACACCTACTCCTACC...ATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGCTCCATTACTGCTGCTaGAATTCCCAGCCCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVETGVAHTWHSTLQLHYCC*NSQPIL Trigger: CAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAG...CTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | TCACCAACTAGCTTCTGGTTAACCCTCAGGGAACTGGAGGAGTGTCAGCGGAACTTGTCCGTGAGTCCTTaGAAGATGACGGGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTSFWLTLRELEECQRNLSVSP*KMTGLR Trigger: CCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAA...GTTCCGCTGACACTCCTCCAGTTCCCTGAGGGTTAACCAGAAGCTAGTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCAGGTGCTGGAAGAGGGATaGCCACTCAGTGAAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVETGVAHTWHSTLQVLEEG*PLSEVV Trigger: AACAACTTCACTGAGTGGGCATCCCTCTTCCAGCAC...CTGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCTAGAGATGGGTATATTTCCAGCAGCCAGGCCAATGTGGTCTTGTTAGAGAAACCAGGCCCATaGCAGTGGAAGGGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRARDGYISSSQANVVLLEKPGP*QWKGTP Trigger: TGGGGTACCCTTCCACTGGCATGGGCCTGGTTTCTC...TAACAAGACCACATTGGCCTGGCTGCTGGAAATATACCCATCTCTAGCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGGCATCTTCACCAGCCTGGATaGTACATTCTAGAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAPSPHVGHCVCVCVWHLHQPG*YILEAV Trigger: CACGGCCTCTAGAATGTACCATCCAGGCTGGTGAAG...ATGCCACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| 3UTR CAA 72 bp | TGCCACTGTCCTGTAATAAAGTCTGTGAGCACTACATaGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHCPVIKSVSTT*ACAGAVGLPVA Trigger: GGCAACTGGCAAGCCCACTGCACCAGCACATGCCAATGTAGTGCTCACAGACTTTATTACAGGACAGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| 3UTR CAA 72 bp | CTACATTGGCATGTGCTGGTGCAGTGGGCTTGCCAGTaGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHWHVLVQWACQ*PVWLAKEGRNE Trigger: TTCATTTCTACCTTCCTTGGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACATGCCAATGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGGCATCTCCATTACTGCTGCTaGAATTCCCAGCCCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAPSPHVGHCVCVCVWHLHYCC*NSQPIL Trigger: CAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAG...ATGCCACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGCACTCAACTCTGCACTCCTCCATTACTGCTaGTGCAATTCCCAGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CVCLCGDRSCPHMALNSALLHYC*CNSQPI Trigger: AATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAG...TGCAGAGTTGAGTGCCATGTGTGGGCAACTCCTGTCTCCACACAGACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS-3UTR GCA 90 bp | GACAGGGCTAGAGATGGGTATATTTCCAGCAGCCAGGCCAATGTGGTCTTGTTACTCCTCCTCCATTACTaGTGCTGCAATTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRARDGYISSSQANVVLLLLLHY*CCNSQP Trigger: GGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAG...TAACAAGACCACATTGGCCTGGCTGCTGGAAATATACCCATCTCTAGCCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTTTGGTGGATCTGTTGGCCCATGCATGACATGAGTGCCCTGGTGGACAGAGTGGTCTTGTTAGGGTaGAACTCAGGTGTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWWICWPMHDMSALVDRVVLLG*NSGVFS Trigger: TGAGAAGACACCTGAGTTCCACCCTAACAAGACCAC...TCTGTCCACCAGGGCACTCATGTCATGCATGGGCCAACAGATCCACCAAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCCTAGTCCACATGTGGGTCATTGTGTGTGTGTTTGTGTGTGGCATGTGGTCTTGTTAGGGTaGAACTCAGGTGTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGAPSPHVGHCVCVCVWHVVLLG*NSGVFS Trigger: TGAGAAGACACCTGAGTTCCACCCTAACAAGACCAC...ATGCCACACACAAACACACACACAATGACCCACATGTGGACTAGGGGCACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| 3UTR CAA 72 bp | CCAGCAGACACTGAGTCACCAGCACAAGTGTTTTTATaGAAGGACAACAACCGGTACATGGGAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PADTESPAQVFL*KDNNRYMGSPG Trigger: TCCTGGGCTTCCCATGTACCGGTTGTTGTCCTTCAATAAAAACACTTGTGCTGGTGACTCAGTGTCTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS-3UTR GCA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCTTGTCCGTGAGTCCTTaGAAGATGACGGGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CYRSEISLTTCVARLALSLSVSP*KMTGLR Trigger: CCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAA...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS-3UTR GCA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCAGTACAGGGTGTCATTaGCTAGGGATGCAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYRSEISLTTCVARLALSSTGCH*LGMQDP Trigger: AGGATCCTGCATCCCTAGGCAATGACACCCTGTACT...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS-3UTR GCA 90 bp | TGCTATAGAAGCGAGATATCCCTGACTACTTGTGTGGCAAGATTAGCTTTGAGCCCCAGATCCAGCTCCTaGAATTCCAAAGCTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYRSEISLTTCVARLALSPRSSS*NSKAVS Trigger: GCTTACAGCTTTGGAATTGCAGGAGCTGGATCTGGG...GCTCAAAGCTAATCTTGCCACACAAGTAGTCAGGGATATCTCGCTTCTATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS-3UTR CAA 90 bp | CGGCTGGGTAGAGGACTATTGAGGCCCCATGTCCTGCCTGGCACCCTGGCCCAGGTTGTCCGTGAGTCCTaGCAAGATGACGGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGRGLLRPHVLPGTLAQVVRES*QDDGLE Trigger: CTCAAGCCCGTCATCTTGCAAGGACTCACGGACAAC...CTGGGCCAGGGTGCCAGGCAGGACATGGGGCCTCAATAGTCCTCTACCCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS GCA 90 bp | AGGGGTGGTTCCCAGGAGACGGAATGGTGGCGGAGAGTAGTGCATTaGCTAGGGATGCAGGATCCTGGGGCTGCAGCAGCTGTTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RGGSQETEWWRRVVH*LGMQDPGAAAAVPH Trigger: ATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS GCA 90 bp | GTGTGCCCGACGCTCCACTGTGCAACGCTCCTCCTCCATTACTGCTaGTGCAATTCCCAGCCCATTCTGTTTCCATCCCCCTTCGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VCPTLHCATLLLHYC*CNSQPILFPSPFAR Trigger: TCTGGCGAAGGGGGATGGAAACAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGGCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS GCA 90 bp | GATGTGTGCCCGACGCTCCACTGTGCAACGCTCCTCCTCCATTACTaGTGCTGCAATTCCCAGCCCATTCTGTTTCCATCCCCCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVCPTLHCATLLLHY*CCNSQPILFPSPFA Trigger: GGCGAAGGGGGATGGAAACAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGGCACACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS CCA 90 bp | GGAATGGTGGCGGAGAGTAGTGCATTGCCTAGGGATGCAGGATCCTaGGGCTGCAGCAGCTGTTCCACATATTCCTGGAAGGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMVAESSALPRDAGS*GCSSCSTYSWKGRS Trigger: GGACCTGCCCTTCCAGGAATATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR CAA 90 bp | GGTACATGGGAAGCCCAGGAGGAAAGAGGCCTGAGATGGGGCGGGCTCTGTGATGTTGTCCGTGAGTCCTaGCAAGATGACGGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTWEAQEERGLRWGGLCDVVRES*QDDGLE Trigger: CTCAAGCCCGTCATCTTGCAAGGACTCACGGACAAC...ATCACAGAGCCCGCCCCATCTCAGGCCTCTTTCCTCCTGGGCTTCCCATGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS TCA 90 bp | CTCAGGAGGGTAGAGGAACCAGCGCTTCCGACCATAGATAACCTCTaGGAAACCAGGCCCATGCCAGTGGAAGGGTACCCCAGATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRRVEEPALPTIDNL*ETRPMPVEGYPRSS Trigger: GCTGGATCTGGGGTACCCTTCCACTGGCATGGGCCTGGTTTCTCAGAGGTTATCTATGGTCGGAAGCGCTGGTTCCTCTACCCTCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS GCA 90 bp | GTGGCGGAGAGTAGTGCATTGCCTAGGGATGCAGGATCCTGGGGCTaGAGCAGCTGTTCCACATATTCCTGGAAGGGCAGGTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAESSALPRDAGSWG*SSCSTYSWKGRSTF Trigger: GAAAGTGGACCTGCCCTTCCAGGAATATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS CCA 90 bp | GTACCCCAGATCCAGCTCCTGCAATTCCAAAGCTGTAAGCAGGGGTaGTTCCCAGGAGACGGAATGGTGGCGGAGAGTAGTGCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPQIQLLQFQSCKQG*FPGDGMVAESSAGR Trigger: TCTTCCAGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTTGGAATTGCAGGAGCTGGATCTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
||
| CDS CCA 90 bp | AATTCCAAAGCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATGGTaGCGGAGAGTAGTGCATTGCCTAGGGATGCAGGATCCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSKAVSRGGSQETEW*RRVVHCLGMQDPGA Trigger: AGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTTGGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS CCA 90 bp | GTACCCCAGATCCAGCTCCTGCAATTCCAAAGCTGTAAGCAGGGGTaGTTCCCAGGAGACGGAATGGTGGCGGAGAGTAGTGCATTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPQIQLLQFQSCKQG*FPGDGMVAESSALP Trigger: AGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTTGGAATTGCAGGAGCTGGATCTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGGTGGACAGAGTGTGTGTGTCTGTGTGGAGACAGGAGTTGCCCACACATGGTTGTCCGTGAGTCCTaGCAAGATGACGGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWWTECVCLCGDRSCPHMVVRES*QDDGLE Trigger: CTCAAGCCCGTCATCTTGCAAGGACTCACGGACAAC...CATGTGTGGGCAACTCCTGTCTCCACACAGACACACACACTCTGTCCACCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS GCA 90 bp | CTTGAGGAAGGCATAGTGCTGCATGAATTCGGAGTACGTGATGTGTaGCCGACGCTCCACTGTGCAACGCTCCTCCTCCATTACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEEGIVLHEFGVRDV*PTLHCATLLLHYCC Trigger: GCAGCAGTAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGGCACACATCACGTACTCCGAATTCATGCAGCACTATGCCTTCCTCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
||
| CDS CCA 90 bp | AATTCCAAAGCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATGGTaGCGGAGAGTAGTGCTGGAAGAGGGATGCCCACTCAGTGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: NSKAVSRGGSQETEW*RRVVLEEGCPLSEV Trigger: AACTTCACTGAGTGGGCATCCCTCTTCCAGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTTGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS GCA 90 bp | AAAAAGTACAGGGTGTCATTGCCTAGGGATGCAGGATCCTGGGGCTaGAGCAGCTGTTCCACATATTCCTGGAAGGGCAGGTCCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: KKYRVSLPRDAGSWG*SSCSTYSWKGRSTF Trigger: GAAAGTGGACCTGCCCTTCCAGGAATATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGACACCCTGTACTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS CCA 90 bp | CATATTCCTGGAAGGGCAGGTCCACTTTCTGGTAGGAGTAGGTGTTaGCTGTACTCAAGCGAACAATGTTGTCCCCGAACGAGGCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: HIPGRAGPLSGRSRC*LYSSEQCCPRTRLA Trigger: TGCTAGCCTCGTTCGGGGACAACATTGTTCGCTTGAGTACAGCCAACACCTACTCCTACCAGAAAGTGGACCTGCCCTTCCAGGAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CAA 90 bp | CAGGGGTGGTTCCCAGGAGACGGAATGGTGGCGGAGAGTAGTGCATaGCCTAGGGATGCAGGATCCTGGGGCTGCAGCAGCTGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: QGWFPGDGMVAESSA*PRDAGSWGCSSCST Trigger: TGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| CDS CCA 72 bp | GCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATGGTaGCGGAGAGTAGTGCTGGAAGAGGGATGCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: AVSRGGSQETEW*RRVVLEEGCPL Trigger: GAGTGGGCATCCCTCTTCCAGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS CCA 72 bp | AAAGCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATaGTGGCGGAGAGTAGTGCTGGAAGAGGGATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KAVSRGGSQETE*WRRVVLEEGCP Trigger: TGGGCATCCCTCTTCCAGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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| CDS CCA 72 bp | GCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATGGTaGCGGAGAGTAGTGCATTGCCTAGGGATGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: AVSRGGSQETEW*RRVVHCLGMQD Trigger: ATCCTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| CDS CAA 72 bp | AGGTTTTCCCGGGAACACAGGGCCCGGAACTTCGAGTaGTCCGTGAGTCCTTGCAAGATGACGGGCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RFSREHRARNFE*SVSPCKMTGLR Trigger: CCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAACTCGAAGTTCCGGGCCCTGTGTTCCCGGGAAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS TCA 72 bp | GTAGAGGAACCAGCGCTTCCGACCATAGATAACCTCTaGGAAACCAGGCCCATGCCAGTGGAAGGGTACCCC | + |
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Preference number: 6 (lower is better) Translates to: VEEPALPTIDNL*ETRPMPVEGYP Trigger: GGGGTACCCTTCCACTGGCATGGGCCTGGTTTCTCAGAGGTTATCTATGGTCGGAAGCGCTGGTTCCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS GCA 72 bp | ACGCTCCACTGTGCAACGCTCCTCCTCCATTACTGCTaGTGCAATTCCCAGCCCATTCTGTTTCCATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: TLHCATLLLHYC*CNSQPILFPSP Trigger: GGGGGATGGAAACAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAGCGTTGCACAGTGGAGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS GCA 72 bp | CCGACGCTCCACTGTGCAACGCTCCTCCTCCATTACTaGTGCTGCAATTCCCAGCCCATTCTGTTTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: PTLHCATLLLHY*CCNSQPILFPS Trigger: GGATGGAAACAGAATGGGCTGGGAATTGCAGCAGCAGTAATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS GCA 72 bp | GGCATAGTGCTGCATGAATTCGGAGTACGTGATGTGTaGCCGACGCTCCACTGTGCAACGCTCCTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GIVLHEFGVRDV*PTLHCATLLLH Trigger: ATGGAGGAGGAGCGTTGCACAGTGGAGCGTCGGGCACACATCACGTACTCCGAATTCATGCAGCACTATGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CCA 72 bp | GCGGAGAGTAGTGCATTGCCTAGGGATGCAGGATCCTaGGGCTGCAGCAGCTGTTCCACATATTCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AESSALPRDAGS*GCSSCSTYSWK Trigger: CTTCCAGGAATATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGCACTACTCTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| CDS CCA 72 bp | AAAGCTGTAAGCAGGGGTGGTTCCCAGGAGACGGAATaGTGGCGGAGAGTAGTGCATTGCCTAGGGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: KAVSRGGSQETE*WRRVVHCLGMQ Trigger: CTGCATCCCTAGGCAATGCACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152434.9 |
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| CDS CAA 72 bp | ACACAGGGCCCGGAACTTCGAGTTGTCCGTGAGTCCTaGCAAGATGACGGGCTTGAGGAAGGCATAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TQGPELRVVRES*QDDGLEEGIVL Trigger: CAGCACTATGCCTTCCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAACTCGAAGTTCCGGGCCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CAA 90 bp | TTCCCGGGAACACAGGGCCCGGAACTTCGAGTTGTCCGTGAGTCCTaGCAAGATGACGGGCTTGAGGAAGGCATAGTGCTGCATGAATTC | + |
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Preference number: 6 (lower is better) Translates to: FPGTQGPELRVVRES*QDDGLEEGIVLHEF Trigger: GAATTCATGCAGCACTATGCCTTCCTCAAGCCCGTCATCTTGCAAGGACTCACGGACAACTCGAAGTTCCGGGCCCTGTGTTCCCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CCA 72 bp | ATCCAGCTCCTGCAATTCCAAAGCTGTAAGCAGGGGTaGTTCCCAGGAGACGGAATGGTGGCGGAGAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: IQLLQFQSCKQG*FPGDGMVAESS Trigger: ACTACTCTCCGCCACCATTCCGTCTCCTGGGAACCACCCCTGCTTACAGCTTTGGAATTGCAGGAGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CCA 72 bp | GGAAGGGCAGGTCCACTTTCTGGTAGGAGTAGGTGTTaGCTGTACTCAAGCGAACAATGTTGTCCCCGAACG | + |
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Preference number: 6 (lower is better) Translates to: GRAGPLSGRSRC*LYSSEQCCPRT Trigger: CGTTCGGGGACAACATTGTTCGCTTGAGTACAGCCAACACCTACTCCTACCAGAAAGTGGACCTGCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 ENSMUST00000152434.9 |
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| CDS CCA 72 bp | AAGTACAGGGTGTCATTGCCTAGGGATGCAGGATCCTaGGGCTGCAGCAGCTGTTCCACATATTCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KYRVSLPRDAGS*GCSSCSTYSWK Trigger: CTTCCAGGAATATGTGGAACAGCTGCTGCAGCCCCAGGATCCTGCATCCCTAGGCAATGACACCCTGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026832.14 ENSMUST00000133595.9 |
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