Pregenerated sensors for JMJD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098789Ensembl transcript IDs: ENSMUST00000044675.5, ENSMUST00000129679.2, ENSMUST00000135365.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGGTGCTGGGCCCGACCTTCCAACACATCCAGTACATGGCTTATaGGCAGGCGGCGTTCAGCAGGCATCACAAAGCGGTCCCCTCGCA | + |
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Preference number: 1 (lower is better) Translates to: LGAGPDLPTHPVHGL*AGGVQQASQSGPLA Trigger: TGCGAGGGGACCGCTTTGTGATGCCTGCTGAACGCCGCCTGCCCATAAGCCATGTACTGGATGTGTTGGAAGGTCGGGCCCAGCACCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | GGGCCTGTTGGGGCACACCCAATCCCGGTAGAAGCAGAGTGGGCTTaGGGGCTCATCCAGGTAGGGCACAACACGAGGTACATTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: GPVGAHPIPVEAEWA*GLIQVGHNTRYIEV Trigger: GACCTCAATGTACCTCGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCACTCTGCTTCTACCGGGATTGGGTGTGCCCCAACAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | AGGACTCCTGGGTGCTGGGCCCGACCTTCCAACACATCCAGTACATaGCTTATGGGCAGGCGGCGTTCAGCAGGCATCACAAAGCGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RTPGCWARPSNTSST*LMGRRRSAGITKRS Trigger: GGACCGCTTTGTGATGCCTGCTGAACGCCGCCTGCCCATAAGCCATGTACTGGATGTGTTGGAAGGTCGGGCCCAGCACCCAGGAGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | CCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTCACCTCCGTaGAGCCCACCGTGGCTCTTAAGTAGGACAGGGACCACTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PRPHNHLESQPHSPP*SPPWLLSRTGTTSG Trigger: TCCAGAAGTGGTCCCTGTCCTACTTAAGAGCCACGGTGGGCTCCACGGAGGTGAGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | AATGCAGGGCCTGTTGGGGCACACCCAATCCCGGTAGAAGCAGAGTaGGCTTGGGGGCTCATCCAGGTAGGGCACAACACGAGGTACATT | + |
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Preference number: 1 (lower is better) Translates to: NAGPVGAHPIPVEAE*AWGLIQVGHNTRYI Trigger: AATGTACCTCGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCACTCTGCTTCTACCGGGATTGGGTGTGCCCCAACAGGCCCTGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | AGGGCACATGGGACTCAATGTCAGACAGAAGCTGGGGCAGCTCAGTaGGCAGGTTGGAACACTGTTTCTGCACATAGAGGACTCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RAHGTQCQTEAGAAQ*AGWNTVSAHRGLLG Trigger: ACCCAGGAGTCCTCTATGTGCAGAAACAGTGTTCCAACCTGCCCACTGAGCTGCCCCAGCTTCTGTCTGACATTGAGTCCCATGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | GCTGTACCTGATCCGTGCTTCCTTGTCACCTGTGTGGCAATTTCCTaGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGACCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: AVPDPCFLVTCVAIS*ARSPRPVWHFLDLQ Trigger: TTGGAGGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAGGTGACAAGGAAGCACGGATCAGGTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR TCA 90 bp | GTGGGCTTGGGGGCTCATCCAGGTAGGGCACAACACGAGGTACATTaGGGTCCACTTAGCCATCTCTCCAGCTTGTTTAATGATGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: VGLGAHPGRAQHEVH*GPLSHLSSLFNDGV Trigger: TACCCCATCATTAAACAAGCTGGAGAGATGGCTAAGTGGACCTCAATGTACCTCGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 90 bp | GTCACCTGTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTaGCATTTCTTGGACCTCCAACTAAATTCCAAGTTCCTGCAATGC | + |
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Preference number: 1 (lower is better) Translates to: VTCVAISWARSPRPV*HFLDLQLNSKFLQC Trigger: GCATTGCAGGAACTTGGAATTTAGTTGGAGGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR CCA 90 bp | ATTGACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTaGGAGCCAGAGCCATTATTATCTCCACTTTACAGACAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: IDRFLYIGPCLFPKL*EPEPLLSPLYRQGT Trigger: AGTCCCTTGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR GCA 90 bp | AGCCATTATTATCTCCACTTTACAGACAAGGGACTGATGCTAACATaGAGTGACTCACCCAAGGTCATAGCACTGGTGAGAGGCACTGCT | + |
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Preference number: 1 (lower is better) Translates to: SHYYLHFTDKGLMLT*SDSPKVIALVRGTA Trigger: AGCAGTGCCTCTCACCAGTGCTATGACCTTGGGTGAGTCACTGCATGTTAGCATCAGTCCCTTGTCTGTAAAGTGGAGATAATAATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR-3UTR CCA 90 bp | AGCGGTCCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTCACCACACTCACCTCCGTaGAGCCCACCGTGGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SGPLAPRPHNHLESQPHSPHSPP*SPPWLL Trigger: TAAGAGCCACGGTGGGCTCCACGGAGGTGAGTGTGG...TGAGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGGACCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTTATGGGCAGGCGGCGTTCAGCAGGCATCACAAAGCGGTCCCCTCGCACGCACCCCGCTGGCTTTaGGAATGGCACCATGACTAC | + |
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Preference number: 2 (lower is better) Translates to: MAYGQAAFSRHHKAVPSHAPRWL*EWHHDY Trigger: GTAGTCATGGTGCCATTCTCAAAGCCAGCGGGGTGC...GTGCGAGGGGACCGCTTTGTGATGCCTGCTGAACGCCGCCTGCCCATAAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATCACAAAGCGGTCCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACCACACTCACCTCCGTaGAGCCCACCGTGGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: QASQSGPLAPRPHNHLESPHSPP*SPPWLL Trigger: TAAGAGCCACGGTGGGCTCCACGGAGGTGAGTGTGG...TGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGGACCGCTTTGTGATGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATCACAAAGCGGTCCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCATGGAGGGCTGGCCAGTaGTGCAGAGCATTTCGGATA | + |
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Preference number: 2 (lower is better) Translates to: QASQSGPLAPRPHNHLESWRAGQ*CRAFRI Trigger: TATCCGAAATGCTCTGCAGCACTGGCCAGCCCTCCA...TGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGGACCGCTTTGTGATGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGAACGAGGGAAGTCGCCTGCTTCTCTCCTCAGAACCCACCAGCATCCGGCACCCCGCTGGCTTTaGGAATGGCACCATGACTAC | + |
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Preference number: 2 (lower is better) Translates to: LNERGKSPASLLRTHQHPAPRWL*EWHHDY Trigger: GTAGTCATGGTGCCATTCTCAAAGCCAGCGGGGTGC...CGGATGCTGGTGGGTTCTGAGGAGAGAAGCAGGCGACTTCCCTCGTTCATTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTCACCTCCGCCGTCAGAGCTGTGCTaGGTCTTGAAAACTACAACT | + |
|
Preference number: 2 (lower is better) Translates to: PLAPRPHNHLESQPHSPPPSELC*VLKTTT Trigger: AGTTGTAGTTTTCAAGACCCAGCACAGCTCTGACGG...CGGAGGTGAGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTCACCTCCGTCTACCGTCAGAGCTGTaGTGGGTCTTGAAAACTACA | + |
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Preference number: 2 (lower is better) Translates to: PSHRVRITIWSHSHTHLRLPSEL*WVLKTT Trigger: TGTAGTTTTCAAGACCCAGCACAGCTCTGACGGTAG...ACGGAGGTGAGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGGTGCGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCGTGGAGCCCACCGTGGCTCTTAAGTAGGACAGGGACCACTTCTGGAGGGCCGTCAGAGCTGTGCTaGGTCTTGAAAACTACAACT | + |
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Preference number: 2 (lower is better) Translates to: PPWSPPWLLSRTGTTSGGPSELC*VLKTTT Trigger: AGTTGTAGTTTTCAAGACCCAGCACAGCTCTGACGG...CCCTCCAGAAGTGGTCCCTGTCCTACTTAAGAGCCACGGTGGGCTCCACGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTGGCCAGTGCTGCAGAGCATTTCGGATAATGCAGGGCCTGTTGGGGCACCTACCGTCAGAGCTGTaGTGGGTCTTGAAAACTACA | + |
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Preference number: 2 (lower is better) Translates to: RAGQCCRAFRIMQGLLGHLPSEL*WVLKTT Trigger: TGTAGTTTTCAAGACCCAGCACAGCTCTGACGGTAG...GTGCCCCAACAGGCCCTGCATTATCCGAAATGCTCTGCAGCACTGGCCAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CAA 90 bp | GTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTaGGACCTCCAACTAAATTCCAAGTTCCTGCAATGCCTGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: VAISWARSPRPVWHF*DLQLNSKFLQCLIP Trigger: TGGGATCAGGCATTGCAGGAACTTGGAATTTAGTTGGAGGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGACCATTCGAACTCTAGGCTaGCTCCAGAATCAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: VWQFPGHVHPDLSGISWTIRTLG*LQNQMT Trigger: GGTCATTTGATTCTGGAGGCAGCCTAGAGTTCGAAT...GGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTATTGACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTGGGGACTGATGCTAACATaGAGTGACTCACCCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PFIDRFLYIGPCLFPKLWGLMLT*SDSPKV Trigger: GACCTTGGGTGAGTCACTGCATGTTAGCATCAGTCC...CCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTCAATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR-3UTR CCA 90 bp | CCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACATGTGTGGCAATTTCCTaGGCACGTTCACCCAGACCT | + |
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Preference number: 2 (lower is better) Translates to: PIPKALGARAIIISTLQTCVAIS*ARSPRP Trigger: AGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACA...TGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR CAA 90 bp | AGAGCATTTCGGATAATGCAGGGCCCACTTAGCCATCTCTCCAGCTaGTTTAATGATGGGGTAGTGAGGACCAGAGGAAGAAGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RAFRIMQGPLSHLSS*FNDGVVRTRGRRKE Trigger: TTCCTTTCTTCTTCCTCTGGTCCTCACTACCCCATCATTAAACAAGCTGGAGAGATGGCTAAGTGGGCCCTGCATTATCCGAAATGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129679.2 |
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| 3UTR CCA 72 bp | GGGGCACACCCAATCCCGGTAGAAGCAGAGTGGGCTTaGGGGCTCATCCAGGTAGGGCACAACACGAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: GAHPIPVEAEWA*GLIQVGHNTRY Trigger: GTACCTCGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCACTCTGCTTCTACCGGGATTGGGTGTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 72 bp | CCTGTTGGGGCACACCCAATCCCGGTAGAAGCAGAGTaGGCTTGGGGGCTCATCCAGGTAGGGCACAACACG | + |
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Preference number: 3 (lower is better) Translates to: PVGAHPIPVEAE*AWGLIQVGHNT Trigger: CGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCACTCTGCTTCTACCGGGATTGGGTGTGCCCCAACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR TCA 72 bp | ATGGCAGCGCACGGGGACTCAGCACCCCGCTGGCTTTaGGAATGGCACCATGACTACCGTCAGAGCTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: MAAHGDSAPRWL*EWHHDYRQSCA Trigger: AGCACAGCTCTGACGGTAGTCATGGTGCCATTCTCAAAGCCAGCGGGGTGCTGAGTCCCCGTGCGCTGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR CCA 72 bp | GGGTGCTGGGCCCGACCTTCCAACACATCCAGTACATaGCTTATGGGCAGGCGGCGTTCAGCAGGCATCACA | + |
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Preference number: 3 (lower is better) Translates to: GCWARPSNTSST*LMGRRRSAGIT Trigger: TGTGATGCCTGCTGAACGCCGCCTGCCCATAAGCCATGTACTGGATGTGTTGGAAGGTCGGGCCCAGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR CCA 72 bp | GGGCCCGACCTTCCAACACATCCAGTACATGGCTTATaGGCAGGCGGCGTTCAGCAGGCATCACAAAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: GPDLPTHPVHGL*AGGVQQASQSG Trigger: ACCGCTTTGTGATGCCTGCTGAACGCCGCCTGCCCATAAGCCATGTACTGGATGTGTTGGAAGGTCGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| 3UTR GCA 72 bp | AAAACTACAACTGCACCCCACGAAGGCAGCCAGGCGTaGGATCCTGAGCTAAGGAGCCGTCCGCCAGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: KTTTAPHEGSQA*DPELRSRPPAK Trigger: TTTAGCTGGCGGACGGCTCCTTAGCTCAGGATCGCACGCCTGGCTGCCTTCGTGGGGTGCAGTTGTAGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR CCA 72 bp | CATAACCATCTGGAGTCACAGCCACACTCACCTCCGTaGAGCCCACCGTGGCTCTTAAGTAGGACAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: HNHLESQPHSPP*SPPWLLSRTGT Trigger: GGTCCCTGTCCTACTTAAGAGCCACGGTGGGCTCCACGGAGGTGAGTGTGGCTGTGACTCCAGATGGTTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGCGGTCCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTAGCCATCTCTCCAGCTaGTTTAATGATGGGGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: KAVPSHRVRITIWSHSHTSHLSS*FNDGVV Trigger: CACTACCCCATCATTAAACAAGCTGGAGAGATGGCT...AGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGGACCGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR TCA 72 bp | GGACTCAGCACCCCGCTGGCTTTGAGAATGGCACCATaGCTACCGTCAGAGCTGTGCTGGGTCTTGAAAACT | + |
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Preference number: 3 (lower is better) Translates to: GLSTPLALRMAP*LPSELCWVLKT Trigger: AGTTTTCAAGACCCAGCACAGCTCTGACGGTAGTCATGGTGCCATTCTCAAAGCCAGCGGGGTGCTGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR CCA 72 bp | CTGCTGTACCTGATCCGTGCTTCCTTGTCACCTGTGTaGCAATTTCCTGGGCACGTTCACCCAGACCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LLYLIRASLSPV*QFPGHVHPDLS Trigger: AGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAGGTGACAAGGAAGCACGGATCAGGTACAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR TCA 72 bp | CTTCTCTCCTCAGAACCCACCAGCATCCGAGATGTTTaGGGTGAAAGTATAGCATGGCAGCGCACGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: LLSSEPTSIRDV*GESIAWQRTGT Trigger: AGTCCCCGTGCGCTGCCATGCTATACTTTCACCTCAAACATCTCGGATGCTGGTGGGTTCTGAGGAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129679.2 ENSMUST00000135365.8 |
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| 3UTR GCA 72 bp | ATAGCACTGGTGAGAGGCACTGCTGTACCTGATCCGTaGTTCCTTGTCACCTGTGTGGCAATTTCCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: IALVRGTAVPDP*FLVTCVAISWA Trigger: TGCCCAGGAAATTGCCACACAGGTGACAAGGAAGCACGGATCAGGTACAGCAGTGCCTCTCACCAGTGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR GCA 72 bp | TCACCTTTTATTGACCGCTTCCTCTACATTGGCCCATaGCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: SPFIDRFLYIGP*LFPKLWEPEPL Trigger: TAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTCAATAAAAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR CCA 72 bp | GTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTaGCATTTCTTGGACCTCCAACTAAATTCCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: VAISWARSPRPV*HFLDLQLNSKF Trigger: GAACTTGGAATTTAGTTGGAGGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR GCA 90 bp | CCCCTCGCACCGCGTCCGCATAACCATCTGGAGTCACAGCCACACTCACCTCCGCAACGCCCTCCGAACTaGCTCCAGAGCCGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PLAPRPHNHLESQPHSPPQRPPN*LQSRLR Trigger: GCGGAGGCGGCTCTGGAGGCAGTTCGGAGGGCGTTG...CGGAGGTGAGTGTGGCTGTGACTCCAGATGGTTATGCGGACGCGGTGCGAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| CDS-3UTR GCA 90 bp | GTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGACCCGCCGGCCCGCACTGTaGAGTGAAGGGCCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VWQFPGHVHPDLSGISWTRRPAL*SEGPVP Trigger: AGGCACAGGCCCTTCACTGCACAGTGCGGGCCGGCG...GGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CAGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCACCACACTCACCTCCGTaGAGCCCACCGTGGCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: QAGTWAAARTYSNSRLPPPHSPP*SPPWLL Trigger: TAAGAGCCACGGTGGGCTCCACGGAGGTGAGTGTGG...TGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGAATGACAGGGACCACTTCTaGAGGGCTGGCCAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: REPGQQPGHIRTLGCLQNDRDHF*RAGQCC Trigger: GCAGCACTGGCCAGCCCTCCAGAAGTGGTCCCTGTC...ATTCTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGGCTGGGGCAGCTCAGTaGGCAGGTTGGAACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: RREPGQQPGHIRTLGCLQAGAAQ*AGWNTV Trigger: AACAGTGTTCCAACCTGCCCACTGAGCTGCCCCAGC...CTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGAGCCAAGGGGTCCAGTaGGATCCAGGGTACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RREPGQQPGHIRTLGCLQSQGVQ*DPGYLL Trigger: GAGAAGGTACCCTGGATCCCACTGGACCCCTTGGCT...CTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CAGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGTGGAACCACAGAGCTaGCAGGTACAGCATCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: QAGTWAAARTYSNSRLPPVEPQS*QVQHLA Trigger: GGCGAGATGCTGTACCTGCCAGCTCTGTGGTTCCAC...TGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR GCA 90 bp | AGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGTGGAGGGCTGGCCAGTaGTGCAGAGCATTTCGGATA | + |
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Preference number: 4 (lower is better) Translates to: RREPGQQPGHIRTLGCLQWRAGQ*CRAFRI Trigger: TATCCGAAATGCTCTGCAGCACTGGCCAGCCCTCCA...CTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | AGGCGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGGAGGCCCAGGGCACATaGGACTCAATGTCAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: RREPGQQPGHIRTLGCLQEAQGT*DSMSDR Trigger: TCTGTCTGACATTGAGTCCCATGTGCCCTGGGCCTC...CTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR GCA 90 bp | CGGGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGAATGCAGTGAAGGGCCTGTaGCTGGCTGTAACTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: REPGQQPGHIRTLGCLQNAVKGL*LAVTGV Trigger: TACCCCAGTTACAGCCAGGCACAGGCCCTTCACTGC...ATTCTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | GACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTGGGAGCCAGAGAGGGTACCTTCTCCATaGCTTCCTCGTCCACCACCC | + |
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Preference number: 4 (lower is better) Translates to: DRFLYIGPCLFPKLWEPERVPSP*LPRPPP Trigger: GGGTGGTGGACGAGGAAGCCATGGAGAAGGTACCCT...CTCTGGCTCCCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGACCGTACTGGGTCAGGTCTaGAGCCAAGGGGTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VWQFPGHVHPDLSGISWTVLGQV*SQGVQW Trigger: CCACTGGACCCCTTGGCTCCAGACCTGACCCAGTAC...GGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CCTTGTCACCTGTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCAGTGCCTGGCTGTAACTaGGGTACTGGGTCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PCHLCGNFLGTFTQTCLAVPGCN*GTGSGL Trigger: CAGACCTGACCCAGTACCCCAGTTACAGCCAGGCAC...TGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAGGTGACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR GCA 90 bp | GACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTGGGAGCCAGAGATACAGCCGTGGGACTaGTGGACATGGTGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: DRFLYIGPCLFPKLWEPEIQPWD*WTWWNH Trigger: GTGGTTCCACCATGTCCAGCAGTCCCACGGCTGTAT...CTCTGGCTCCCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGACCGACTGCTGGACATGGTaGAACCACAGAGCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VWQFPGHVHPDLSGISWTDCWTW*NHRAGR Trigger: CCTGCCAGCTCTGTGGTTCCACCATGTCCAGCAGTC...GGTCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | TCCTTGTCACCTGTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCACAGCAATACAGCCGTaGGACTGCTGGACATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLSPVWQFPGHVHPDLSGTAIQP*DCWTWW Trigger: CCACCATGTCCAGCAGTCCCACGGCTGTATTGCTGT...GCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAGGTGACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR TCA 90 bp | TGCCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGAGCCCGCACTGTGCAGTaGAGGGCCTGTGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CLFPKLWEPEPLLSPLYRARTVQ*RACAWL Trigger: CAGCCAGGCACAGGCCCTTCACTGCACAGTGCGGGC...TCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR GCA 90 bp | CCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACACAACGCCCTCCGAACTaGCTCCAGAGCCGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PIPKALGARAIIISTLQTQRPPN*LQSRLR Trigger: GCGGAGGCGGCTCTGGAGGCAGTTCGGAGGGCGTTG...TGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | GACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTGGGAGCCAGAGGTCCGCATAACCATCTaGAGTCACAGCCACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: DRFLYIGPCLFPKLWEPEVRITI*SHSHTH Trigger: GTGAGTGTGGCTGTGACTCCAGATGGTTATGCGGAC...CTCTGGCTCCCAGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR TCA 90 bp | CACCTTTTATTGACCGCTTCCTCTACATTGGCCCATGCCTATTCCCAAAGCTCTAGGCATCTTCCCCAGTaGCTCAGAGGCCCAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HLLLTASSTLAHAYSQSSRHLPQ*LRGPGH Trigger: GTGCCCTGGGCCTCTGAGTCACTGGGGAAGATGCCT...AGAGCTTTGGGAATAGGCATGGGCCAATGTAGAGGAAGCGGTCAATAAAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CTGTGTGGCAATTTCCTGGGCACGTTCACCCAGACCTGTCTGGCATTTCTTGGAAACACATCCAGTACATaGCTTATGGGCAGGCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LCGNFLGTFTQTCLAFLGNTSST*LMGRRR Trigger: ACGCCGCCTGCCCATAAGCCATGTACTGGATGTGTT...TCCAAGAAATGCCAGACAGGTCTGGGTGAACGTGCCCAGGAAATTGCCACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACAAGGACTCCTGGGTGCTaGGCCCGACCTTCCAACACA | + |
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Preference number: 4 (lower is better) Translates to: PIPKALGARAIIISTLQTRTPGC*ARPSNT Trigger: TGTGTTGGAAGGTCGGGCCCAGCACCCAGGAGTCCT...TGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACACACATAGAGGACTCCTaGGTGCTGGGCCCGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: PIPKALGARAIIISTLQTHIEDS*VLGPTF Trigger: GAAGGTCGGGCCCAGCACCCAGGAGTCCTCTATGTG...TGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | TGCCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACAGCCGTGGGACTGCTaGACATGGTGGAACCACAGA | + |
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Preference number: 4 (lower is better) Translates to: CLFPKLWEPEPLLSPLYRQPWDC*TWWNHR Trigger: TCTGTGGTTCCACCATGTCCAGCAGTCCCACGGCTG...TCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| 3UTR CAA 72 bp | CGGATAATGCAGGGCCCACTTAGCCATCTCTCCAGCTaGTTTAATGATGGGGTAGTGAGGACCAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RIMQGPLSHLSS*FNDGVVRTRGR Trigger: TCTTCCTCTGGTCCTCACTACCCCATCATTAAACAAGCTGGAGAGATGGCTAAGTGGGCCCTGCATTATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129679.2 |
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| CDS-3UTR TCA 90 bp | GGAACCTGGGCAGCAGCCAGGACATATTCGAACTCTAGGCTGCCTCCAGAATCAGAAAGTAACTGTACTTaGGGTCATACTCCATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: GTWAAARTYSNSRLPPESESNCT*GHTPCH Trigger: ATGACATGGAGTATGACCTCAAGTACAGTTACTTTC...TGATTCTGGAGGCAGCCTAGAGTTCGAATATGTCCTGGCTGCTGCCCAGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGCCATTATTATCTCCACTTTACAGACAAGGGACTGATGCTAACATGCGCTCAGTGGGCAGGTTaGAACACTGTTTCTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SQSHYYLHFTDKGLMLTCAQWAG*NTVSAH Trigger: ATGTGCAGAAACAGTGTTCCAACCTGCCCACTGAGC...GCATGTTAGCATCAGTCCCTTGTCTGTAAAGTGGAGATAATAATGGCTCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CCA 90 bp | CCTATTCCCAAAGCTCTGGGAGCCAGAGCCATTATTATCTCCACTTTACAGACACAGCTGGTAGGTTGCTaGTGTGTAGAGATTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: PIPKALGARAIIISTLQTQLVGC*CVEIVR Trigger: CCTTACAATCTCTACACACCAGCAACCTACCAGCTG...TGTCTGTAAAGTGGAGATAATAATGGCTCTGGCTCCCAGAGCTTTGGGAATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS TCA 90 bp | GCCCAGGCTCCCTCCGCGCTGTCCTCGCGCGGTCGCTGCTGCCTGTaGGAGTGCACTCACCGCGAGCCGCCGCCGGGAACTCTTGCAACG | + |
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Preference number: 5 (lower is better) Translates to: AQAPSALSSRGRCCL*ECTHREPPPGTLAT Trigger: CGTTGCAAGAGTTCCCGGCGGCGGCTCGCGGTGAGTGCACTCTCACAGGCAGCAGCGACCGCGCGAGGACAGCGCGGAGGGAGCCTGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135365.8 |
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| CDS CCA 90 bp | CGCCGGCCCGCACTGTGCAGTGAAGGGCCTGTGCCTGGCTGTAACTaGGGTACTGGGTCAGGTCTGGAGCCAAGGGGTCCAGTGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: RRPALCSEGPVPGCN*GTGSGLEPRGPVGS Trigger: GGATCCCACTGGACCCCTTGGCTCCAGACCTGACCCAGTACCCCAGTTACAGCCAGGCACAGGCCCTTCACTGCACAGTGCGGGCCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS TCA 90 bp | GTGGGCTTGGGGGCTCATCCAGGTAGGGCACAACACGAGGTACATTaGGGTCGCGAGCCGCCGCCGGGAACTCTTGCAACGCCCTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: VGLGAHPGRAQHEVH*GREPPPGTLATPSE Trigger: TTCGGAGGGCGTTGCAAGAGTTCCCGGCGGCGGCTCGCGACCTCAATGTACCTCGTGTTGTGCCCTACCTGGATGAGCCCCCAAGCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS GCA 90 bp | GGAACCACAGAGCTGGCAGGTACAGCATCTCGCCGGCCCGCACTGTaGAGTGAAGGGCCTGTGCCTGGCTGTAACTGGGGTACTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GTTELAGTASRRPAL*SEGPVPGCNWGTGS Trigger: TGACCCAGTACCCCAGTTACAGCCAGGCACAGGCCCTTCACTGCACAGTGCGGGCCGGCGAGATGCTGTACCTGCCAGCTCTGTGGTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 90 bp | GTGAAGGGCCTGTGCCTGGCTGTAACTGGGGTACTGGGTCAGGTCTaGAGCCAAGGGGTCCAGTGGGATCCAGGGTACCTTCTCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: VKGLCLAVTGVLGQV*SQGVQWDPGYLLHG Trigger: GCCATGGAGAAGGTACCCTGGATCCCACTGGACCCCTTGGCTCCAGACCTGACCCAGTACCCCAGTTACAGCCAGGCACAGGCCCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 90 bp | TACCAGAAATTCACAGCAATACAGCCGTGGGACTGCTGGACATGGTaGAACCACAGAGCTGGCAGGTACAGCATCTCGCCGGCCCGCACT | + |
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Preference number: 5 (lower is better) Translates to: YQKFTAIQPWDCWTW*NHRAGRYSISPART Trigger: AGTGCGGGCCGGCGAGATGCTGTACCTGCCAGCTCTGTGGTTCCACCATGTCCAGCAGTCCCACGGCTGTATTGCTGTGAATTTCTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS-3UTR CAA 90 bp | CATTATTATCTCCACTTTACAGACAAGGGACTGATGCTAACATGCAGTGACTCAAGCTCAGTGGGCAGGTaGGAACACTGTTTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: HYYLHFTDKGLMLTCSDSSSVGR*EHCFCT Trigger: TGTGCAGAAACAGTGTTCCAACCTGCCCACTGAGCT...TGAGTCACTGCATGTTAGCATCAGTCCCTTGTCTGTAAAGTGGAGATAATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 72 bp | GGGGTACTGGGTCAGGTCTGGAGCCAAGGGGTCCAGTaGGATCCAGGGTACCTTCTCCATGGCTTCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: GVLGQVWSQGVQ*DPGYLLHGFLV Trigger: GACGAGGAAGCCATGGAGAAGGTACCCTGGATCCCACTGGACCCCTTGGCTCCAGACCTGACCCAGTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 72 bp | GCACTGTGCAGTGAAGGGCCTGTGCCTGGCTGTAACTaGGGTACTGGGTCAGGTCTGGAGCCAAGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ALCSEGPVPGCN*GTGSGLEPRGP Trigger: TGGACCCCTTGGCTCCAGACCTGACCCAGTACCCCAGTTACAGCCAGGCACAGGCCCTTCACTGCACAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 72 bp | CTGTGCCTGGCTGTAACTGGGGTACTGGGTCAGGTCTaGAGCCAAGGGGTCCAGTGGGATCCAGGGTACCTT | + |
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Preference number: 6 (lower is better) Translates to: LCLAVTGVLGQV*SQGVQWDPGYL Trigger: AAGGTACCCTGGATCCCACTGGACCCCTTGGCTCCAGACCTGACCCAGTACCCCAGTTACAGCCAGGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 72 bp | TTCACAGCAATACAGCCGTGGGACTGCTGGACATGGTaGAACCACAGAGCTGGCAGGTACAGCATCTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: FTAIQPWDCWTW*NHRAGRYSISP Trigger: CGGCGAGATGCTGTACCTGCCAGCTCTGTGGTTCCACCATGTCCAGCAGTCCCACGGCTGTATTGCTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS TCA 72 bp | GCTGGTAGGTTGCTGGTGTGTAGAGATTGTAAGGGATaGAGGGCCGGTCGCTGGGTGGATGTAACAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGRLLVCRDCKG*RAGRWVDVTRS Trigger: ACTTCTTGTTACATCCACCCAGCGACCGGCCCTTCATCCCTTACAATCTCTACACACCAGCAACCTACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS GCA 72 bp | CTCATAGTGGTCCTTGTGCAAGGATGTCACTGCAGATaGATCACCCAGCCAGAAGTTCACGGCATCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LIVVLVQGCHCR*ITQPEVHGIRH Trigger: ATGCCTGATGCCGTGAACTTCTGGCTGGGTGATGCATCTGCAGTGACATCCTTGCACAAGGACCACTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS GCA 72 bp | TCATACCAGAAATTCACAGCAATACAGCCGTGGGACTaGTGGACATGGTGGAACCACAGAGCTGGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SYQKFTAIQPWD*WTWWNHRAGRY Trigger: GTACCTGCCAGCTCTGTGGTTCCACCATGTCCAGCAGTCCCACGGCTGTATTGCTGTGAATTTCTGGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CCA 72 bp | CCTAAAAGTGCCCTCTTCAGTCAGCTGGTAGGTTGCTaGTGTGTAGAGATTGTAAGGGATGAAGGGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: PKSALFSQLVGC*CVEIVRDEGPV Trigger: GACCGGCCCTTCATCCCTTACAATCTCTACACACCAGCAACCTACCAGCTGACTGAAGAGGGCACTTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS GCA 72 bp | CAGATTCTCATAGTGGTCCTTGTGCAAGGATGTCACTaGAGATGCATCACCCAGCCAGAAGTTCACGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QILIVVLVQGCH*RCITQPEVHGI Trigger: GATGCCGTGAACTTCTGGCTGGGTGATGCATCTGCAGTGACATCCTTGCACAAGGACCACTATGAGAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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| CDS CAA 72 bp | GTCAAGGCCTGTGGCCCTGGTGAGGGTGTCCATCAGTaGAAAGTAACTGTACTTGAGGTCATACTCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: VKACGPGEGVHQ*KVTVLEVILHV Trigger: GACATGGAGTATGACCTCAAGTACAGTTACTTTCAACTGATGGACACCCTCACCAGGGCCACAGGCCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044675.5 |
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