Pregenerated sensors for JMJD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036819Ensembl transcript IDs: ENSMUST00000045279.13, ENSMUST00000108777.10, ENSMUST00000147163.8
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACAGAGGCCAGCACATCTGCAAGGCGGCCAATATCAAATGCAGCCTaGTGTAGGCCCAGGTCTAGGCTCCGGCTGTCCCCTGAATCCCCC | + |
Preference number: 1 (lower is better) Translates to: TEASTSARRPISNAA*CRPRSRLRLSPESP Trigger: GGGGGATTCAGGGGACAGCCGGAGCCTAGACCTGGGCCTACAGCAGGCTGCATTTGATATTGGCCGCCTTGCAGATGTGCTGGCCTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR TCA 90 bp | GGTGCCACCCGCTGGGCACAAACACCATCTCACCAGGCTCCTGTATaGCTTCAATGGGAAGGCTGTGGTGCTGGATCTTGGGATACAGGT | + |
Preference number: 1 (lower is better) Translates to: GATRWAQTPSHQAPV*LQWEGCGAGSWDTG Trigger: ACCTGTATCCCAAGATCCAGCACCACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTGAGATGGTGTTTGTGCCCAGCGGGTGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 90 bp | TGGTGCCAGTCAGGCATGGAGTCCTTCCATTCTTCGACCTCATGCTaGACAGCCTGGAGCTCTTGCTGCAGGAAGTGCCACATGTTTGGC | + |
Preference number: 1 (lower is better) Translates to: WCQSGMESFHSSTSC*TAWSSCCRKCHMFG Trigger: GCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGACTCCATGCCTGACTGGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR TCA 90 bp | TGGGTCTATCCGTGTCCTCCACAGGGCTCCCTATACTTCTGCAGATaGGCTAGCATAGGAGGCCAGGCCTTGAAGGACTGCCATGGAGAA | + |
Preference number: 1 (lower is better) Translates to: WVYPCPPQGSLYFCR*ASIGGQALKDCHGE Trigger: TTCTCCATGGCAGTCCTTCAAGGCCTGGCCTCCTATGCTAGCTCATCTGCAGAAGTATAGGGAGCCCTGTGGAGGACACGGATAGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR GCA 90 bp | TCCTTCCATTCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTGCTaGAGGAAGTGCCACATGTTTGGCAGGTTGCAGCCATTGACCCAG | + |
Preference number: 1 (lower is better) Translates to: SFHSSTSCCTAWSSC*RKCHMFGRLQPLTQ Trigger: CTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 90 bp | GAGTCCTTCCATTCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTaGTGCAGGAAGTGCCACATGTTTGGCAGGTTGCAGCCATTGACC | + |
Preference number: 1 (lower is better) Translates to: ESFHSSTSCCTAWSS*CRKCHMFGRLQPLT Trigger: GGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 90 bp | TGGTGGTGCCAGTCAGGCATGGAGTCCTTCCATTCTTCGACCTCATaGTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTGCCACATGTTT | + |
Preference number: 1 (lower is better) Translates to: WWCQSGMESFHSSTS*CTAWSSCCRKCHMF Trigger: AAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGACTCCATGCCTGACTGGCACCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CCA 90 bp | TCAGGCATGGAGTCCTTCCATTCTTCGACCTCATGCTGCACAGCCTaGAGCTCTTGCTGCAGGAAGTGCCACATGTTTGGCAGGTTGCAG | + |
Preference number: 1 (lower is better) Translates to: SGMESFHSSTSCCTA*SSCCRKCHMFGRLQ Trigger: CTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGACTCCATGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR TCA 90 bp | ACTGGCACAGGCTTGGAGCACATCCTATTCCTTGGGAAGGTAGCCTaGATTTCCAGAAGGGCCCTGGGCCTTCTGAAGAAGATGCTCTCC | + |
Preference number: 1 (lower is better) Translates to: TGTGLEHILFLGKVA*ISRRALGLLKKMLS Trigger: GGAGAGCATCTTCTTCAGAAGGCCCAGGGCCCTTCTGGAAATTCAGGCTACCTTCCCAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR GCA 90 bp | ACCATCTCACCAGGCTCCTGTATGACTTCAATGGGAAGGCTGTGGTaGTGGATCTTGGGATACAGGTGGGTGTCCAGGAGCTCAGTGGAA | + |
Preference number: 1 (lower is better) Translates to: TISPGSCMTSMGRLW*WILGYRWVSRSSVE Trigger: TTCCACTGAGCTCCTGGACACCCACCTGTATCCCAAGATCCAGCACCACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTGAGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 90 bp | TCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTaGCACATGTTTGGCAGGTTGCAGCCATTGACCCAGTTGTGGTTA | + |
Preference number: 1 (lower is better) Translates to: SSTSCCTAWSSCCRK*HMFGRLQPLTQLWL Trigger: TAACCACAACTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CCA 90 bp | ATCTCACCAGGCTCCTGTATGACTTCAATGGGAAGGCTGTGGTGCTaGATCTTGGGATACAGGTGGGTGTCCAGGAGCTCAGTGGAAGTC | + |
Preference number: 1 (lower is better) Translates to: ISPGSCMTSMGRLWC*ILGYRWVSRSSVEV Trigger: GACTTCCACTGAGCTCCTGGACACCCACCTGTATCCCAAGATCCAGCACCACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR TCA 90 bp | AGCAACTCTTCTGGCTGTGGTGAGAATGCGCTGGTGTCCACTCTCTaGAAGTCAGGATTCACAACCACAGAGGCCAGCACATCTGCAAGG | + |
Preference number: 1 (lower is better) Translates to: SNSSGCGENALVSTL*KSGFTTTEASTSAR Trigger: CCTTGCAGATGTGCTGGCCTCTGTGGTTGTGAATCCTGACTTTCAGAGAGTGGACACCAGCGCATTCTCACCACAGCCAGAAGAGTTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 90 bp | CCCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTaGTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGT | + |
Preference number: 1 (lower is better) Translates to: PPSGWRDGSAVKSTD*SSEVLSSKSQQPHG Trigger: ACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CCA 90 bp | TTTGGCTGGACCTTCCTCAAGGTTCACCCTCTGCAAGTACTGTACTaGCACAGGCTTGGAGCACATCCTATTCCTTGGGAAGGTAGCCTG | + |
Preference number: 1 (lower is better) Translates to: FGWTFLKVHPLQVLY*HRLGAHPIPWEGSL Trigger: CAGGCTACCTTCCCAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTACAGTACTTGCAGAGGGTGAACCTTGAGGAAGGTCCAGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR TCA 90 bp | ATCCCAGCAACCACACGGTGGCTCACATCCATCTGTAATGAGATCTaGCGCCCTGTTCTGGAGTGTCTGAAAACAGCTACAGGGTACTCA | + |
Preference number: 1 (lower is better) Translates to: IPATTRWLTSICNEI*RPVLECLKTATGYS Trigger: TGAGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATCTCATTACAGATGGATGTGAGCCACCGTGTGGTTGCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR TCA 90 bp | ACATGGTGGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATaGAGCAATTGTCTGTCTCCAACATGCATGGGCAGTGAGCATAGC | + |
Preference number: 1 (lower is better) Translates to: TWWCADTSHVDSWRP*SNCLSPTCMGSEHS Trigger: GCTATGCTCACTGCCCATGCATGTTGGAGACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACCACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTCTTAACTGCT | + |
Preference number: 1 (lower is better) Translates to: DPITDGCEPPCGCWE*NSGPLEKQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGCTTTTCCAGAGGTCCTGAGTTCCATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR GCA 90 bp | GCGCTGGCGCTCTGCACCCTCCCAAGTGCTGGGGTTACAGGTGTATaGACAGGCTATTTATTTTTAATAAAGACTTATGTGAGCACACTG | + |
Preference number: 1 (lower is better) Translates to: ALALCTLPSAGVTGV*TGYLFLIKTYVSTL Trigger: CAGTGTGCTCACATAAGTCTTTATTAAAAATAAATAGCCTGTGCATACACCTGTAACCCCAGCACTTGGGAGGGTGCAGAGCGCCAGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CCA 90 bp | TCAAAGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATGGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTCTTA | + |
Preference number: 1 (lower is better) Translates to: SKDPITDGCEPPCGC*EWNSGPLEKQSVLL Trigger: TAAGAGCACTGACTGCTTTTCCAGAGGTCCTGAGTTCCATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CCA 90 bp | CTAAACAACTTTCAAATTGTGGCAGCTATGGTTCAAGCTAGGGTTTaGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCA | + |
Preference number: 1 (lower is better) Translates to: LNNFQIVAAMVQARV*AVNELFKQHEGAPP Trigger: TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGCTTGAACCATAGCTGCCACAATTTGAAAGTTGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTGCCACATGTCCAGGTTGTACACTTaGTGGTGCCACCCGCTGGGC | + |
Preference number: 2 (lower is better) Translates to: SSTSCCTAWSSCCRKCHMSRLYT*WCHPLG Trigger: GCCCAGCGGGTGGCACCATCAAGTGTACAACCTGGA...CATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | CCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACACCTGGCAGTGGTGGTaGCAGTCAGGCATGGAGTCC | + |
Preference number: 2 (lower is better) Translates to: PRPYPEGFLRDDRVCHWHTWQWW*QSGMES Trigger: GGACTCCATGCCTGACTGGCACCACCACTGCCAGGT...GTGCCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACGCTCCGGCTGTCCCCTaGATCCCCCTTCAGTCCTTG | + |
Preference number: 2 (lower is better) Translates to: SQGELATLQHSTPPAVPHAPAVP*IPLQSL Trigger: CAAGGACTGAAGGGGGATTCAGGGGACAGCCGGAGC...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GAGTTTAGGGTTGCGCTGGCGCTCTGCACCCTCCCAAGTGCTGGGGTTACAGGTCAGGCCTTGAAGGACTaGCATGGAGAAGAATGCGAC | + |
Preference number: 2 (lower is better) Translates to: EFRVALALCTLPSAGVTGQALKD*HGEECD Trigger: GTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCCTG...ACCTGTAACCCCAGCACTTGGGAGGGTGCAGAGCGCCAGCGCAACCCTAAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATACTCCCCCTTCAGGCTaGAGAGATGGTTCAGCAGTT | + |
Preference number: 2 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHTPPSG*RDGSAV Trigger: AACTGCTGAACCATCTCTCCAGCCTGAAGGGGGAGT...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGGACAGAACTAGAGGATaGGAGTCTTGGAGGGCAACT | + |
Preference number: 2 (lower is better) Translates to: SPVVPTKRAAPCGRQGGKDRTRG*ESWRAT Trigger: AGTTGCCCTCCAAGACTCTCATCCTCTAGTTCTGTC...CTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATGACAGAACTAGAGGATaGGAGTCTTGGAGGGCAACT | + |
Preference number: 2 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHDRTRG*ESWRAT Trigger: AGTTGCCCTCCAAGACTCTCATCCTCTAGTTCTGTC...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | CTCAGAGGCCTGTTCTCAGCCACAGCCCCTACTTCTAGAAACAGCACAGAGAACCCCAACCAAGAGAGCTaGTCCTTGTGGCAGGCAGGG | + |
Preference number: 2 (lower is better) Translates to: LRGLFSATAPTSRNSTENPNQES*SLWQAG Trigger: CCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGG...GTTCTCTGTGCTGTTTCTAGAAGTAGGGGCTGTGGCTGAGAACAGGCCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGTGTCTCCAACATGCATaGGCAGTGAGCATAGCCAAC | + |
Preference number: 2 (lower is better) Translates to: SPVVPTKRAAPCGRQGGKCLQHA*AVSIAN Trigger: GTTGGCTATGCTCACTGCCCATGCATGTTGGAGACA...CTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | ACTGCAGGCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAACTAAGGCTGTGCCCTTaGCAGCTGGGGCAACACAAT | + |
Preference number: 2 (lower is better) Translates to: TAGSARHSGMCVSSSHWELRLCP*QLGQHN Trigger: ATTGTGTTGCCCCAGCTGCCAAGGGCACAGCCTTAG...TTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGCCTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TGCTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTGCCACATGTTTGGCAGGTTGCACCAGGCTCCTGTATaGCTTCAATGGGAAGGCTGT | + |
Preference number: 2 (lower is better) Translates to: CCTAWSSCCRKCHMFGRLHQAPV*LQWEGC Trigger: ACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTG...CAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | TCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGGTTAAGAGCACTGACTaGTCTTCAGAGGTCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: SPVVPTKRAAPCGRQGGKVKSTD*SSEVLS Trigger: ACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAAC...CTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATGTTAAGAGCACTGACTaGTCTTCAGAGGTCCTGAGT | + |
Preference number: 2 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHVKSTD*SSEVLS Trigger: ACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAAC...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGCTCTGCAGCAGCCACTaGGTCCTCCAGCTGCTGAAG | + |
Preference number: 2 (lower is better) Translates to: LQAGEMVQQLRALTALQRLCSSH*VLQLLK Trigger: CTTCAGCAGCTGGAGGACGCAGTGGCTGCTGCAGAG...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGCGCTCTGCACCCTCCCAAGTGCTGGGGTTACAGGTGTATGCACAGGCTATTTAGCTGTGTCTCATCCTaGTGGTCTATGCTGCAGTCC | + |
Preference number: 2 (lower is better) Translates to: GALHPPKCWGYRCMHRLFSCVSS*WSMLQS Trigger: GGACTGCAGCATAGACCACCAGGATGAGACACAGCT...AAATAGCCTGTGCATACACCTGTAACCCCAGCACTTGGGAGGGTGCAGAGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TGCTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTGCCACATGTTTGGCAGGTTGATCTTGGGATACAGGTaGGTGTCCAGGAGCTCAGTG | + |
Preference number: 2 (lower is better) Translates to: CCTAWSSCCRKCHMFGRLILGYR*VSRSSV Trigger: CACTGAGCTCCTGGACACCCACCTGTATCCCAAGAT...CAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGGATGGTGCCACCCGCTaGGCACAAACACCATCTCAC | + |
Preference number: 2 (lower is better) Translates to: VSSWWSMLQSRVNSRLSEDGATR*AQTPSH Trigger: GTGAGATGGTGTTTGTGCCCAGCGGGTGGCACCATC...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CAA 90 bp | CCAGGCTCCTGTATGACTTCAATGGGAAGGCTGTGGTGCTGGATCTaGGGATACAGGTGGGTGTCCAGGAGCTCAGTGGAAGTCACATCA | + |
Preference number: 2 (lower is better) Translates to: PGSCMTSMGRLWCWI*GYRWVSRSSVEVTS Trigger: TGATGTGACTTCCACTGAGCTCCTGGACACCCACCTGTATCCCAAGATCCAGCACCACAGCCTTCCCATTGAAGTCATACAGGAGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | CTCAGAGGCCTGTTCTCAGCCACAGCCCCTACTTCTAGAAACAGCACAGAGAACCAACAGAGGAAGCACTaGCTCATCCAGGGTCAGCCT | + |
Preference number: 2 (lower is better) Translates to: LRGLFSATAPTSRNSTENQQRKH*LIQGQP Trigger: AGGCTGACCCTGGATGAGTCAGTGCTTCCTCTGTTG...GTTCTCTGTGCTGTTTCTAGAAGTAGGGGCTGTGGCTGAGAACAGGCCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGACTCATGGAGGCCATaGAGCAATTGTCTGTCTCCA | + |
Preference number: 2 (lower is better) Translates to: AQPGIVACVYPPPTGKDEDSWRP*SNCLSP Trigger: TGGAGACAGACAATTGCTTCATGGCCTCCATGAGTC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTCCCAACCAAGAGAGCTaGTCCTTGTGGCAGGCAGGG | + |
Preference number: 2 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCPNQES*SLWQAG Trigger: CCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGG...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GGCGCTCTGCACCCTCCCAAGTGCTGGGGTTACAGGTGTATGCACAGGCTATTTTCTTGCTGCAGGAAGTaGCACATGTTTGGCAGGTTG | + |
Preference number: 2 (lower is better) Translates to: GALHPPKCWGYRCMHRLFSCCRK*HMFGRL Trigger: CAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGA...AAATAGCCTGTGCATACACCTGTAACCCCAGCACTTGGGAGGGTGCAGAGCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | CCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACTGTCTCCAACATGCATaGGCAGTGAGCATAGCCAAC | + |
Preference number: 2 (lower is better) Translates to: PRPYPEGFLRDDRVCHWHCLQHA*AVSIAN Trigger: GTTGGCTATGCTCACTGCCCATGCATGTTGGAGACA...GTGCCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGATGACCTGGCAGTGGTaGTGCCAGTCAGGCATGGAG | + |
Preference number: 2 (lower is better) Translates to: LQAGEMVQQLRALTALQRMTWQW*CQSGME Trigger: CTCCATGCCTGACTGGCACCACCACTGCCAGGTCAT...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | ACTGCAGGCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAACTGTTCTGGAGTGTCTaGAAACAGCTACAGGGTACT | + |
Preference number: 2 (lower is better) Translates to: TAGSARHSGMCVSSSHWELFWSV*KQLQGT Trigger: AGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAG...TTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGCCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | ATGCGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATGGCTCTTCTGGCTGTGGTaGGAATGCGCTGGTGTCCAC | + |
Preference number: 2 (lower is better) Translates to: MRLLPSSVQSSLSWGLGWLFWLW*ECAGVH Trigger: GTGGACACCAGCGCATTCTCACCACAGCCAGAAGAG...CCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR-3UTR GCA 90 bp | ACTGCAGGCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAATCAAGGTTCACCCTCTaGAAGTACTGTACTGGCACA | + |
Preference number: 2 (lower is better) Translates to: TAGSARHSGMCVSSSHWESRFTL*KYCTGT Trigger: TGTGCCAGTACAGTACTTGCAGAGGGTGAACCTTGA...TTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGCCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACCAGGCCTTGAAGGACTaGCATGGAGAAGAATGCGAC | + |
Preference number: 2 (lower is better) Translates to: SQGELATLQHSTPPAVPHQALKD*HGEECD Trigger: GTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCCTG...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | CTCATCCAGGGTCAGCCTGAGACTGGGTCTATCCGTGTCCTCCACAGGGCTCCCAGAAACCTGGTTTCATaGCTACTACTCAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: LIQGQPETGSIRVLHRAPRNLVS*LLLNSH Trigger: ATGTGAATTGAGTAGTAGTCATGAAACCAGGTTTCT...GGGAGCCCTGTGGAGGACACGGATAGACCCAGTCTCAGGCTGACCCTGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGATCTGTAATGAGATCTaGCGCCCTGTTCTGGAGTGT | + |
Preference number: 2 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWICNEI*RPVLEC Trigger: ACACTCCAGAACAGGGCGTCAGATCTCATTACAGAT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGGCTCTTCAGAGGTCCTaGGTTCAAAATCCCAGCAAC | + |
Preference number: 2 (lower is better) Translates to: VSSWWSMLQSRVNSRLSEALQRS*VQNPSN Trigger: GTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGC...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | TCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGGTCTTGGAGGGCAACTaGATACATACATACATACAT | + |
Preference number: 2 (lower is better) Translates to: SPVVPTKRAAPCGRQGGKVLEGN*IHTYIH Trigger: ATGTATGTATGTATGTATGCAGTTGCCCTCCAAGAC...CTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR GCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCCCAACCAAGAGAGCTaGTCCTTGTGGCAGGCAGGG | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMPNQES*SLWQAG Trigger: CCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGGTACTGGCACAGGCTTaGAGCACATCCTATTCCTTG | + |
Preference number: 2 (lower is better) Translates to: PLQAGEMVQQLRALTALQVLAQA*STSYSL Trigger: CAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTAC...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | AGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGGTTAAATTCCCATTTTaGCTGGACCTTCCTCAAGGT | + |
Preference number: 2 (lower is better) Translates to: SGPNQESCSLWQAGRKDRVKFPF*LDLPQG Trigger: ACCTTGAGGAAGGTCCAGCCAAAATGGGAATTTAAC...CCTATCTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGTTGCTAGAGGCTAGATaGGTGAACATCTCTCTAGCC | + |
Preference number: 2 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWLLEAR*VNISLA Trigger: GGCTAGAGAGATGTTCACCCATCTAGCCTCTAGCAA...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGCAATCATCTCTATCCTaGGGACTTGGATGGACCAGA | + |
Preference number: 2 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWQSSLS*GLGWTR Trigger: TCTGGTCCATCCAAGTCCCCAGGATAGAGATGATTG...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGACAGCACAGAGAACATaGTGGTGTGCAGACACTAGT | + |
Preference number: 2 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWTAQRT*WCADTS Trigger: ACTAGTGTCTGCACACCACCATGTTCTCTGTGCTGT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACAACAGAGGAAGCACTaGCTCATCCAGGGTCAGCCT | + |
Preference number: 2 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQQQRKH*LIQGQP Trigger: AGGCTGACCCTGGATGAGTCAGTGCTTCCTCTGTTG...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGCCTTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATGTCTCCAACATGCATaGGCAGTGAGCATAGCCAAC | + |
Preference number: 2 (lower is better) Translates to: GLEGLPWRRMRLLPSSVQCLQHA*AVSIAN Trigger: GTTGGCTATGCTCACTGCCCATGCATGTTGGAGACA...TTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | AGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCCTACAAAGTGTGGTGCTGGATCTTaGGATACAGGTGGGTGTCCA | + |
Preference number: 2 (lower is better) Translates to: RDDRVCHWHKVLYKNPTKCGAGS*DTGGCP Trigger: TGGACACCCACCTGTATCCCAAGATCCAGCACCACA...CTTTGTAGGGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTGACTTCATGATGACCTaGCAGTGGTGGTGCCAGTCA | + |
Preference number: 2 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCDFMMT*QWWCQS Trigger: TGACTGGCACCACCACTGCCAGGTCATCATGAAGTC...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGAGTACCTTTACCTGCTaGGCCCTTTATCACGGGCCC | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMSTFTC*ALYHGP Trigger: GGGCCCGTGATAAAGGGCTCAGCAGGTAAAGGTACT...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGTTGCTAGAGGCTAGATaGGTGAACATCTCTCTAGCC | + |
Preference number: 2 (lower is better) Translates to: LQAGEMVQQLRALTALQRLLEAR*VNISLA Trigger: GGCTAGAGAGATGTTCACCCATCTAGCCTCTAGCAA...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGCCTTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAAACAGCACAGAGAACATaGTGGTGTGCAGACACTAGT | + |
Preference number: 2 (lower is better) Translates to: GLEGLPWRRMRLLPSSVQTAQRT*WCADTS Trigger: ACTAGTGTCTGCACACCACCATGTTCTCTGTGCTGT...TTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | AGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCCTACAAAGTGTGTCTCATCCTGGTaGTCTATGCTGCAGTCCAGA | + |
Preference number: 2 (lower is better) Translates to: RDDRVCHWHKVLYKNPTKCVSSW*SMLQSR Trigger: TCTGGACTGCAGCATAGACCACCAGGATGAGACACA...CTTTGTAGGGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CAA 90 bp | AGCTCTTGCTGCAGGAAGTGCCACATGTTTGGCAGGTTGCAGCCATaGACCCAGTTGTGGTTAATAGAAATGGTGTCATCCAGGTTGTAC | + |
Preference number: 2 (lower is better) Translates to: SSCCRKCHMFGRLQP*TQLWLIEMVSSRLY Trigger: GTACAACCTGGATGACACCATTTCTATTAACCACAACTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | CATGGTGGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTATCTGTAATGAGATCTaGCGCCCTGTTCTGGAGTGT | + |
Preference number: 2 (lower is better) Translates to: HGGVQTLVMWTHGGHEAIICNEI*RPVLEC Trigger: ACACTCCAGAACAGGGCGTCAGATCTCATTACAGAT...AATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACCACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAAGCTCTTCAGAGGTCCTaGGTTCAAAATCCCAGCAAC | + |
Preference number: 2 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQALQRS*VQNPSN Trigger: GTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGC...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCAGCTCTTCAGAGGTCCTaGGTTCAAAATCCCAGCAAC | + |
Preference number: 2 (lower is better) Translates to: ARVWAVNELFKQHEGAPPALQRS*VQNPSN Trigger: GTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGC...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAAGTACCTTTACCTGCTaGGCCCTTTATCACGGGCCC | + |
Preference number: 2 (lower is better) Translates to: CEHTVAVFRDIRSKDPITSTFTC*ALYHGP Trigger: GGGCCCGTGATAAAGGGCTCAGCAGGTAAAGGTACT...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCAGGCCTTGAAGGACTaGCATGGAGAAGAATGCGAC | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMQALKD*HGEECD Trigger: GTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCCTG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACACAGCCTGGAGCTCTTaGTGCAGGAAGTGCCACATG | + |
Preference number: 2 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYTAWSS*CRKCHM Trigger: CATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGT...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | TGTTCCTATAAGGCCTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTTGTCATTCTTCGACCTCATaGTGCACAGCCTGGAGCTCT | + |
Preference number: 2 (lower is better) Translates to: CSYKASAQTLKAVGLDSCHSSTS*CTAWSS Trigger: AGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATG...ACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGCCTTATAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGGTTAAATTCCCATTTTaGCTGGACCTTCCTCAAGGT | + |
Preference number: 2 (lower is better) Translates to: PLQAGEMVQQLRALTALQVKFPF*LDLPQG Trigger: ACCTTGAGGAAGGTCCAGCCAAAATGGGAATTTAAC...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GATCTGACGCCCTGTTCTGGAGTGTCTGAAAACAGCTACAGGGTACTCACATATCCAGCAACCACACGGTaGCTCACATCCATCTGTAAT | + |
Preference number: 2 (lower is better) Translates to: DLTPCSGVSENSYRVLTYPATTR*LTSICN Trigger: ATTACAGATGGATGTGAGCCACCGTGTGGTTGCTGG...ATATGTGAGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGACTCCCCCTTCAGGCTaGAGAGATGGTTCAGCAGTT | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMTPPSG*RDGSAV Trigger: AACTGCTGAACCATCTCTCCAGCCTGAAGGGGGAGT...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAATGTGTCTCATCCTGGTaGTCTATGCTGCAGTCCAGA | + |
Preference number: 2 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQCVSSW*SMLQSR Trigger: TCTGGACTGCAGCATAGACCACCAGGATGAGACACA...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TGTTCCTATAAGGCCTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTTGTAGCTGTGTCTCATCCTaGTGGTCTATGCTGCAGTCC | + |
Preference number: 2 (lower is better) Translates to: CSYKASAQTLKAVGLDSCSCVSS*WSMLQS Trigger: GGACTGCAGCATAGACCACCAGGATGAGACACAGCT...ACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGCCTTATAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGAGAAACCTGGTTTCATaGCTACTACTCAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWRNLVS*LLLNSH Trigger: ATGTGAATTGAGTAGTAGTCATGAAACCAGGTTTCT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTATAACTACAAGAGGCTaGGAGGCTCCAAAGAAACCT | + |
Preference number: 2 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCITTRG*EAPKKP Trigger: AGGTTTCTTTGGAGCCTCTCAGCCTCTTGTAGTTAT...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATCATGACAGAACTAGAGGATaGGAGTCTTGGAGGGCAACT | + |
Preference number: 2 (lower is better) Translates to: LKDCHGEECDCSLVLYNHDRTRG*ESWRAT Trigger: AGTTGCCCTCCAAGACTCTCATCCTCTAGTTCTGTC...ATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTGTTCTGGAGTGTCTaGAAACAGCTACAGGGTACT | + |
Preference number: 2 (lower is better) Translates to: ARVWAVNELFKQHEGAPPLFWSV*KQLQGT Trigger: AGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAG...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCTGGTGTCCACTCTCTaGAAGTCAGGATTCACAACC | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMLVSTL*KSGFTT Trigger: GGTTGTGAATCCTGACTTTCAGAGAGTGGACACCAG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | CTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGTGGCTCACATCCGTCTTGGAGGGCAACTaGATACATACATACATACAT | + |
Preference number: 2 (lower is better) Translates to: LFRGPEFKIPATTRWLTSVLEGN*IHTYIH Trigger: ATGTATGTATGTATGTATGCAGTTGCCCTCCAAGAC...GGATGTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGGTCTTGGAGGGCAACTaGATACATACATACATACAT | + |
Preference number: 2 (lower is better) Translates to: VSSWWSMLQSRVNSRLSEVLEGN*IHTYIH Trigger: ATGTATGTATGTATGTATGCAGTTGCCCTCCAAGAC...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | TTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATCATGTACTGGCACAGGCTTaGAGCACATCCTATTCCTTG | + |
Preference number: 2 (lower is better) Translates to: LKDCHGEECDCSLVLYNHVLAQA*STSYSL Trigger: CAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTAC...ATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | TGTTCCTATAAGGCCTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTTGTCTGCAAGTACTGTACTaGCACAGGCTTGGAGCACAT | + |
Preference number: 2 (lower is better) Translates to: CSYKASAQTLKAVGLDSCLQVLY*HRLGAH Trigger: ATGTGCTCCAAGCCTGTGCCAGTACAGTACTTGCAG...ACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGCCTTATAGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCTGCAAGTACTGTACTaGCACAGGCTTGGAGCACAT | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMLQVLY*HRLGAH Trigger: ATGTGCTCCAAGCCTGTGCCAGTACAGTACTTGCAG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | TGTTCCTATAAGGCCTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTTGTTCCTGGGGACTTGGATaGACCAGAACCTGGGTTTTT | + |
Preference number: 2 (lower is better) Translates to: CSYKASAQTLKAVGLDSCSWGLG*TRTWVF Trigger: AAAAACCCAGGTTCTGGTCCATCCAAGTCCCCAGGA...ACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGCCTTATAGGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | TTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATCATCTGTTCTGGAGTGTCTaGAAACAGCTACAGGGTACT | + |
Preference number: 2 (lower is better) Translates to: LKDCHGEECDCSLVLYNHLFWSV*KQLQGT Trigger: AGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAG...ATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR TCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACGACTCATGGAGGCCATaGAGCAATTGTCTGTCTCCA | + |
Preference number: 2 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYDSWRP*SNCLSP Trigger: TGGAGACAGACAATTGCTTCATGGCCTCCATGAGTC...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAAGTTGCTGGGCCACTTaGGTGAAGTTGAAGTGTCTC | + |
Preference number: 2 (lower is better) Translates to: CEHTVAVFRDIRSKDPITSCWAT*VKLKCL Trigger: GAGACACTTCAACTTCACTCAAGTGGCCCAGCAACT...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTCTCCAGAATTCTTCCTaGATCTTGAGCTACAGCATA | + |
Preference number: 2 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCLQNSS*ILSYSI Trigger: TATGCTGTAGCTCAAGATGCAGGAAGAATTCTGGAG...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR GCA 90 bp | TGTTCCTATAAGGCCTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTTGTTCAAGGTTCACCCTCTaGAAGTACTGTACTGGCACA | + |
Preference number: 2 (lower is better) Translates to: CSYKASAQTLKAVGLDSCSRFTL*KYCTGT Trigger: TGTGCCAGTACAGTACTTGCAGAGGGTGAACCTTGA...ACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGCCTTATAGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAGTACTGGCACAGGCTTaGAGCACATCCTATTCCTTG | + |
Preference number: 2 (lower is better) Translates to: CEHTVAVFRDIRSKDPITVLAQA*STSYSL Trigger: CAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTAC...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | GGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCGGCTCCAAAGAAACCTaGTTTCATGACTACTACTCA | + |
Preference number: 2 (lower is better) Translates to: GFLGMTGCVTGTRSCIRTGSKET*FHDYYS Trigger: TGAGTAGTAGTCATGAAACCAGGTTTCTTTGGAGCC...GGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCTAAGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACCCAGCAACCACACGGTaGCTCACATCCATCTGTAAT | + |
Preference number: 2 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYPATTR*LTSICN Trigger: ATTACAGATGGATGTGAGCCACCGTGTGGTTGCTGG...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTATGATGACCTGGCAGTaGTGGTGCCAGTCAGGCATG | + |
Preference number: 2 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTMMTWQ*WCQSGM Trigger: CATGCCTGACTGGCACCACCACTGCCAGGTCATCAT...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGAGAAACCTGGTTTCATaGCTACTACTCAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: LQAGEMVQQLRALTALQRRNLVS*LLLNSH Trigger: ATGTGAATTGAGTAGTAGTCATGAAACCAGGTTTCT...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACATCTGTAATGAGATCTaGCGCCCTGTTCTGGAGTGT | + |
Preference number: 2 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYICNEI*RPVLEC Trigger: ACACTCCAGAACAGGGCGTCAGATCTCATTACAGAT...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | GATCTGACGCCCTGTTCTGGAGTGTCTGAAAACAGCTACAGGGTACTCACATATGTTAAATTCCCATTTTaGCTGGACCTTCCTCAAGGT | + |
Preference number: 2 (lower is better) Translates to: DLTPCSGVSENSYRVLTYVKFPF*LDLPQG Trigger: ACCTTGAGGAAGGTCCAGCCAAAATGGGAATTTAAC...ATATGTGAGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTAGCTGTGTCTCATCCTaGTGGTCTATGCTGCAGTCC | + |
Preference number: 2 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSSCVSS*WSMLQS Trigger: GGACTGCAGCATAGACCACCAGGATGAGACACAGCT...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACATAACTACAAGAGGCTaGGAGGCTCCAAAGAAACCT | + |
Preference number: 2 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYITTRG*EAPKKP Trigger: AGGTTTCTTTGGAGCCTCTCAGCCTCTTGTAGTTAT...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCTCCAGAATTCTTCCTaGATCTTGAGCTACAGCATA | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMLQNSS*ILSYSI Trigger: TATGCTGTAGCTCAAGATGCAGGAAGAATTCTGGAG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CCA 90 bp | CTGCAAAGATGTTCACAAATTCAGCATTATTTAGAGCTGTGTCTCATCCTGGTGCCAGCAACCACACGGTaGCTCACATCCATCTGTAAT | + |
Preference number: 2 (lower is better) Translates to: LQRCSQIQHYLELCLILVPATTR*LTSICN Trigger: ATTACAGATGGATGTGAGCCACCGTGTGGTTGCTGG...CACCAGGATGAGACACAGCTCTAAATAATGCTGAATTTGTGAACATCTTTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | CTGCAAAGATGTTCACAAATTCAGCATTATTTAGAGCTGTGTCTCATCCTGGTGTCCTGGGGACTTGGATaGACCAGAACCTGGGTTTTT | + |
Preference number: 2 (lower is better) Translates to: LQRCSQIQHYLELCLILVSWGLG*TRTWVF Trigger: AAAAACCCAGGTTCTGGTCCATCCAAGTCCCCAGGA...CACCAGGATGAGACACAGCTCTAAATAATGCTGAATTTGTGAACATCTTTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGTGGTGAGAATGCGCTaGTGTCCACTCTCTGAAAGT | + |
Preference number: 2 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTVVRMR*CPLSES Trigger: ACTTTCAGAGAGTGGACACCAGCGCATTCTCACCAC...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACAGCTTTTCATACACTaGTTAATTCCTCCTAGTTCA | + |
Preference number: 2 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQQLFIH*LIPPSS Trigger: TGAACTAGGAGGAATTAATCAGTGTATGAAAAGCTG...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACAGCTTTTCATACACTaGTTAATTCCTCCTAGTTCA | + |
Preference number: 2 (lower is better) Translates to: ARVWAVNELFKQHEGAPPQLFIH*LIPPSS Trigger: TGAACTAGGAGGAATTAATCAGTGTATGAAAAGCTG...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR GCA 90 bp | CTGCAAAGATGTTCACAAATTCAGCATTATTTAGAGCTGTGTCTCATCCTGGTGTCAAGGTTCACCCTCTaGAAGTACTGTACTGGCACA | + |
Preference number: 2 (lower is better) Translates to: LQRCSQIQHYLELCLILVSRFTL*KYCTGT Trigger: TGTGCCAGTACAGTACTTGCAGAGGGTGAACCTTGA...CACCAGGATGAGACACAGCTCTAAATAATGCTGAATTTGTGAACATCTTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGGGCAACACAATGAGATaGTTTAAGATCTCACAAAAC | + |
Preference number: 2 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMGNTMR*FKISQN Trigger: GTTTTGTGAGATCTTAAATCATCTCATTGTGTTGCC...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAGGCAACACAATGAGATaGTTTAAGATCTCACAAAAC | + |
Preference number: 2 (lower is better) Translates to: CEHTVAVFRDIRSKDPITGNTMR*FKISQN Trigger: GTTTTGTGAGATCTTAAATCATCTCATTGTGTTGCC...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTGGCTCCAAAGAAACCTaGTTTCATGACTACTACTCA | + |
Preference number: 2 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSGSKET*FHDYYS Trigger: TGAGTAGTAGTCATGAAACCAGGTTTCTTTGGAGCC...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | CTGCAAAGATGTTCACAAATTCAGCATTATTTAGAGCTGTGTCTCATCCTGGTGCAGCTTTTCATACACTaGTTAATTCCTCCTAGTTCA | + |
Preference number: 2 (lower is better) Translates to: LQRCSQIQHYLELCLILVQLFIH*LIPPSS Trigger: TGAACTAGGAGGAATTAATCAGTGTATGAAAAGCTG...CACCAGGATGAGACACAGCTCTAAATAATGCTGAATTTGTGAACATCTTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR TCA 90 bp | CTGCAAAGATGTTCACAAATTCAGCATTATTTAGAGCTGTGTCTCATCCTGGTGAAAATTCTTCAAAATTaGTCCCTGTGCAGGACTTCA | + |
Preference number: 2 (lower is better) Translates to: LQRCSQIQHYLELCLILVKILQN*SLCRTS Trigger: TGAAGTCCTGCACAGGGATCAATTTTGAAGAATTTT...CACCAGGATGAGACACAGCTCTAAATAATGCTGAATTTGTGAACATCTTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CCA 90 bp | GGTTACAGGTGTATGCACAGGCTATTTATTTTTAATAAAGACTTATGTGAGCACTCCTCCACTTTGACATaGATTCTAGGGTTCAAACCG | + |
Preference number: 2 (lower is better) Translates to: GYRCMHRLFIFNKDLCEHSSTLT*ILGFKP Trigger: CGGTTTGAACCCTAGAATCCATGTCAAAGTGGAGGA...GTGCTCACATAAGTCTTTATTAAAAATAAATAGCCTGTGCATACACCTGTAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CAA 90 bp | AGCCATTTCTCCAGCCCAGGTTATTGGTCTTTTATAAACCAACTTTaGGTTTCACTGCTATTCTCTATTTCAAAGACTTGTGCTGGTTAT | + |
Preference number: 2 (lower is better) Translates to: SHFSSPGYWSFINQL*VSLLFSISKTCAGY Trigger: ATAACCAGCACAAGTCTTTGAAATAGAGAATAGCAGTGAAACCAAAAGTTGGTTTATAAAAGACCAATAACCTGGGCTGGAGAAATGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CCA 72 bp | CTCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTaGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCC | + |
Preference number: 3 (lower is better) Translates to: LSSGPNQESCSL*QAGRKDRCPCP Trigger: GGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR TCA 72 bp | CCAACAGAGGAAGCACTGACTCATCCAGGGTCAGCCTaGGACTGGGTCTATCCGTGTCCTCCACAGGGCTCC | + |
Preference number: 3 (lower is better) Translates to: PTEEALTHPGSA*DWVYPCPPQGS Trigger: GGAGCCCTGTGGAGGACACGGATAGACCCAGTCTCAGGCTGACCCTGGATGAGTCAGTGCTTCCTCTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR-3UTR CAA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATACATTCTTGGCAGGCTaGCTAGAGGCTAGATGGGTG | + |
Preference number: 3 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHTFLAG*LEARWV Trigger: CACCCATCTAGCCTCTAGCAAGCCTGCCAAGAATGT...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR TCA 72 bp | CCGTGTCCTCCACAGGGCTCCCTATACTTCTGCAGATaGGCTAGCATAGGAGGCCAGGCCTTGAAGGACTGC | + |
Preference number: 3 (lower is better) Translates to: PCPPQGSLYFCR*ASIGGQALKDC Trigger: GCAGTCCTTCAAGGCCTGGCCTCCTATGCTAGCTCATCTGCAGAAGTATAGGGAGCCCTGTGGAGGACACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR GCA 72 bp | AAAGGCTTCCCAGAGTTTAGGGTTGCGCTGGCGCTCTaGACCCTCCCAAGTGCTGGGGTTACAGGTGTATGC | + |
Preference number: 3 (lower is better) Translates to: KGFPEFRVALAL*TLPSAGVTGVC Trigger: GCATACACCTGTAACCCCAGCACTTGGGAGGGTGCAGAGCGCCAGCGCAACCCTAAACTCTGGGAAGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CAA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGAATCTGAGCCCTCCTaGGGAGGGAACACGTCACTA | + |
Preference number: 3 (lower is better) Translates to: AQPGIVACVYPPPTGKDEESEPS*GGNTSL Trigger: TAGTGACGTGTTCCCTCCCAAGGAGGGCTCAGATTC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR GCA 72 bp | TCATGCTGCACAGCCTGGAGCTCTTGCTGCAGGAAGTaGCACATGTTTGGCAGGTTGCAGCCATTGACCCAG | + |
Preference number: 3 (lower is better) Translates to: SCCTAWSSCCRK*HMFGRLQPLTQ Trigger: CTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 72 bp | TCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTGCTaGAGGAAGTGCCACATGTTTGGCAGGTTGCAGCCA | + |
Preference number: 3 (lower is better) Translates to: SSTSCCTAWSSC*RKCHMFGRLQP Trigger: TGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 72 bp | CCTGTGCAGGACTTCATGATGACCTGGCAGTGGTGGTaGCAGTCAGGCATGGAGTCCTTCCATTCTTCGACC | + |
Preference number: 3 (lower is better) Translates to: PVQDFMMTWQWW*QSGMESFHSST Trigger: GGTCGAAGAATGGAAGGACTCCATGCCTGACTGGCACCACCACTGCCAGGTCATCATGAAGTCCTGCACAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 72 bp | AGCTACAGCATACTAAAGGGCCTCTGCAGCAGCCACTaGGTCCTCCAGCTGCTGAAGCAACTCTTCTGGCTG | + |
Preference number: 3 (lower is better) Translates to: SYSILKGLCSSH*VLQLLKQLFWL Trigger: CAGCCAGAAGAGTTGCTTCAGCAGCTGGAGGACGCAGTGGCTGCTGCAGAGGCCCTTTAGTATGCTGTAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR TCA 72 bp | GTCCTCCAGCTGCTGAAGCAACTCTTCTGGCTGTGGTaGGAATGCGCTGGTGTCCACTCTCTGAAAGTCAGG | + |
Preference number: 3 (lower is better) Translates to: VLQLLKQLFWLW*ECAGVHSLKVR Trigger: CCTGACTTTCAGAGAGTGGACACCAGCGCATTCTCACCACAGCCAGAAGAGTTGCTTCAGCAGCTGGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR GCA 72 bp | CATTCTTCGACCTCATGCTGCACAGCCTGGAGCTCTTaGTGCAGGAAGTGCCACATGTTTGGCAGGTTGCAG | + |
Preference number: 3 (lower is better) Translates to: HSSTSCCTAWSS*CRKCHMFGRLQ Trigger: CTGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR CCA 72 bp | GAGTCCTTCCATTCTTCGACCTCATGCTGCACAGCCTaGAGCTCTTGCTGCAGGAAGTGCCACATGTTTGGC | + |
Preference number: 3 (lower is better) Translates to: ESFHSSTSCCTA*SSCCRKCHMFG Trigger: GCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGGAAGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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3UTR-3UTR CAA 90 bp | CCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACTGTACTGGCACAGGCTaGGAGCACATCCTATTCCTT | + |
Preference number: 3 (lower is better) Translates to: PRPYPEGFLRDDRVCHWHCTGTG*EHILFL Trigger: AAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTACA...GTGCCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACATAGGAGGCCAGGCCTaGAAGGACTGCCATGGAGAA | + |
Preference number: 3 (lower is better) Translates to: SQGELATLQHSTPPAVPHIGGQA*KDCHGE Trigger: TTCTCCATGGCAGTCCTTCAAGGCCTGGCCTCCTAT...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGATAGGAGGCCAGGCCTaGAAGGACTGCCATGGAGAA | + |
Preference number: 3 (lower is better) Translates to: VSSWWSMLQSRVNSRLSEIGGQA*KDCHGE Trigger: TTCTCCATGGCAGTCCTTCAAGGCCTGGCCTCCTAT...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGGCAGGTTGCAGCCATaGACCCAGTTGTGGTTAATA | + |
Preference number: 3 (lower is better) Translates to: AQPGIVACVYPPPTGKDEGRLQP*TQLWLI Trigger: TATTAACCACAACTGGGTCAATGGCTGCAACCTGCC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | ACAGCACACCACCAGCTGTGCCTCACATGGCTCCTCTaGAATGTTCCCAGGCCTTACCCAGAAGGGTTTCTT | + |
Preference number: 3 (lower is better) Translates to: TAHHQLCLTWLL*NVPRPYPEGFL Trigger: AAGAAACCCTTCTGGGTAAGGCCTGGGAACATTTCAGAGGAGCCATGTGAGGCACAGCTGGTGGTGTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACGCCTCAGCTCAGACCTaGAAGGCTGTAGGTTTAGAC | + |
Preference number: 3 (lower is better) Translates to: SQGELATLQHSTPPAVPHASAQT*KAVGLD Trigger: GTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGC...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | CATGGTGGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTATCCCCCTTCAGTCCTaGCTCCAGGACAAGGAGCCT | + |
Preference number: 3 (lower is better) Translates to: HGGVQTLVMWTHGGHEAIIPLQS*LQDKEP Trigger: AGGCTCCTTGTCCTGGAGCAAGGACTGAAGGGGGAT...AATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACCACCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | CAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTaGGTTCAAAATCCCAGCAACCACACGGTGGCTCAC | + |
Preference number: 3 (lower is better) Translates to: QQLRALTALQRS*VQNPSNHTVAH Trigger: GTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR GCA 72 bp | CTCCTTGGGAGGGAACACGTCACTAAACTAAGGCTGTaGCCTTGGCAGCTGGGGCAACACAATGAGATGATT | + |
Preference number: 3 (lower is better) Translates to: LLGREHVTKLRL*PWQLGQHNEMI Trigger: AATCATCTCATTGTGTTGCCCCAGCTGCCAAGGGCACAGCCTTAGTTTAGTGACGTGTTCCCTCCCAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTC | + |
Preference number: 3 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLEKQSVL Trigger: GAGCACTGACTGCTTTTCCAGAGGTCCTGAGTTCCATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGGCCTCAGCTCAGACCTaGAAGGCTGTAGGTTTAGAC | + |
Preference number: 3 (lower is better) Translates to: LQAGEMVQQLRALTALQRASAQT*KAVGLD Trigger: GTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAGGC...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTTTCCTCCTAGTTCAGTaGGAGTCTGGAGCTCCTAGG | + |
Preference number: 3 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCFLLVQ*ESGAPR Trigger: CCTAGGAGCTCCAGACTCCAACTGAACTAGGAGGAA...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR GCA 72 bp | CAGGCCTTGAAGGACTGCCATGGAGAAGAATGCGACTaGTCCCTAGTTCTGTACAATCATCTCTATCCTGGG | + |
Preference number: 3 (lower is better) Translates to: QALKDCHGEECD*SLVLYNHLYPG Trigger: CCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATGGAACTCAGGACCTCTGGAAAAGCAG | + |
Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*WEWNSGPLEKQ Trigger: CTGCTTTTCCAGAGGTCCTGAGTTCCATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | ACCTTCCTCAAGGTTCACCCTCTGCAAGTACTGTACTaGCACAGGCTTGGAGCACATCCTATTCCTTGGGAA | + |
Preference number: 3 (lower is better) Translates to: TFLKVHPLQVLY*HRLGAHPIPWE Trigger: TTCCCAAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTACAGTACTTGCAGAGGGTGAACCTTGAGGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | CCACAGCCCCTACTTCTAGAAACAGCACAGAGAACATaGTGGTGTGCAGACACTAGTCATGTGGACTCATGG | + |
Preference number: 3 (lower is better) Translates to: PQPLLLETAQRT*WCADTSHVDSW Trigger: CCATGAGTCCACATGACTAGTGTCTGCACACCACCATGTTCTCTGTGCTGTTTCTAGAAGTAGGGGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATGGAACTCAGGACCTCTGGAAAAGCAGTCA | + |
Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*EWNSGPLEKQS Trigger: TGACTGCTTTTCCAGAGGTCCTGAGTTCCATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGCAGCCATTGACCCAGTaGTGGTTAATAGAAATGGTG | + |
Preference number: 3 (lower is better) Translates to: PLQAGEMVQQLRALTALQQPLTQ*WLIEMV Trigger: CACCATTTCTATTAACCACAACTGGGTCAATGGCTG...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | ACCACACGGTGGCTCACATCCATCTGTAATGAGATCTaGCGCCCTGTTCTGGAGTGTCTGAAAACAGCTACA | + |
Preference number: 3 (lower is better) Translates to: TTRWLTSICNEI*RPVLECLKTAT Trigger: TGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATCTCATTACAGATGGATGTGAGCCACCGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | TGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATaGAGCAATTGTCTGTCTCCAACATGCATGGGCAGT | + |
Preference number: 3 (lower is better) Translates to: CADTSHVDSWRP*SNCLSPTCMGS Trigger: ACTGCCCATGCATGTTGGAGACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | ATAGGAAAGGAACCAGGGCCCCAGATACAACCTCCCTaGGCAAGTTTATCTACCTGGCCATGTTTGAGGACT | + |
Preference number: 3 (lower is better) Translates to: IGKEPGPQIQPP*ASLSTWPCLRT Trigger: AGTCCTCAAACATGGCCAGGTAGATAAACTTGCTCAGGGAGGTTGTATCTGGGGCCCTGGTTCCTTTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR GCA 72 bp | GGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTaGTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: GWRDGSAVKSTD*SSEVLSSKSQQ Trigger: TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR GCA 72 bp | GGGCCTTCTGAAGAAGATGCTCTCCAGAATTCTTCCTaGATCTTGAGCTACAGCATACTAAAGGGCCTCTGC | + |
Preference number: 3 (lower is better) Translates to: GPSEEDALQNSS*ILSYSILKGLC Trigger: GCAGAGGCCCTTTAGTATGCTGTAGCTCAAGATGCAGGAAGAATTCTGGAGAGCATCTTCTTCAGAAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | CGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTaGGGACTTGGATGGACCAGAACCTGGGTTTTTCAG | + |
Preference number: 3 (lower is better) Translates to: RLLPSSVQSSLS*GLGWTRTWVFQ Trigger: CTGAAAAACCCAGGTTCTGGTCCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GATCTGACGCCCTGTTCTGGAGTGTCTGAAAACAGCTACAGGGTACTCACATATTGTACTGGCACAGGCTaGGAGCACATCCTATTCCTT | + |
Preference number: 3 (lower is better) Translates to: DLTPCSGVSENSYRVLTYCTGTG*EHILFL Trigger: AAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTACA...ATATGTGAGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCATGTACTGGCACAGGCTaGGAGCACATCCTATTCCTT | + |
Preference number: 3 (lower is better) Translates to: ARVWAVNELFKQHEGAPPCTGTG*EHILFL Trigger: AAGGAATAGGATGTGCTCCAAGCCTGTGCCAGTACA...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAGAATCTGAGCCCTCCTaGGGAGGGAACACGTCACTA | + |
Preference number: 3 (lower is better) Translates to: CEHTVAVFRDIRSKDPITESEPS*GGNTSL Trigger: TAGTGACGTGTTCCCTCCCAAGGAGGGCTCAGATTC...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | TGGTTAATAGAAATGGTGTCATCCAGGTTGTACACTTaGTGGTGCCACCCGCTGGGCACAAACACCATCTCA | + |
Preference number: 3 (lower is better) Translates to: WLIEMVSSRLYT*WCHPLGTNTIS Trigger: TGAGATGGTGTTTGTGCCCAGCGGGTGGCACCATCAAGTGTACAACCTGGATGACACCATTTCTATTAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACACATTCTTGGCAGGCTaGCTAGAGGCTAGATGGGTG | + |
Preference number: 3 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYTFLAG*LEARWV Trigger: CACCCATCTAGCCTCTAGCAAGCCTGCCAAGAATGT...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTCACAGCCTGGAGCTCTaGCTGCAGGAAGTGCCACAT | + |
Preference number: 3 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSHSLEL*LQEVPH Trigger: ATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTG...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTATAGGAGGCCAGGCCTaGAAGGACTGCCATGGAGAA | + |
Preference number: 3 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSIGGQA*KDCHGE Trigger: TTCTCCATGGCAGTCCTTCAAGGCCTGGCCTCCTAT...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR TCA 72 bp | AGGACCTCTGGAAAAGCAGTCAGTGCTCTTAACTGCTaGGCCATTTCTCCAGCCCAGGTTATTGGTCTTTTA | + |
Preference number: 3 (lower is better) Translates to: RTSGKAVSALNC*AISPAQVIGLL Trigger: TAAAAGACCAATAACCTGGGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTGACTGCTTTTCCAGAGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CCA 72 bp | CCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTaGCACAAGGTCCTGTATAAGAACCCTACAAAGATT | + |
Preference number: 3 (lower is better) Translates to: PEGFLRDDRVCH*HKVLYKNPTKI Trigger: AATCTTTGTAGGGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTTTCCTCCTAGTTCAGTaGGAGTCTGGAGCTCCTAGG | + |
Preference number: 3 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTFLLVQ*ESGAPR Trigger: CCTAGGAGCTCCAGACTCCAACTGAACTAGGAGGAA...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR-3UTR CAA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTTTCCTCCTAGTTCAGTaGGAGTCTGGAGCTCCTAGG | + |
Preference number: 3 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSFLLVQ*ESGAPR Trigger: CCTAGGAGCTCCAGACTCCAACTGAACTAGGAGGAA...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | AGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATaGACCAGAACCTGGGTTTTTCAGCCATTTAGTACT | + |
Preference number: 3 (lower is better) Translates to: SSVQSSLSWGLG*TRTWVFQPFST Trigger: AGTACTAAATGGCTGAAAAACCCAGGTTCTGGTCCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | TTTATCACGGGCCCCTCCTGGCTTGCTAATCTGATTTaGGATTCTATTATCATTCTAGTTATGATGGTCATG | + |
Preference number: 3 (lower is better) Translates to: FITGPSWLANLI*DSIIILVMMVM Trigger: CATGACCATCATAACTAGAATGATAATAGAATCCCAAATCAGATTAGCAAGCCAGGAGGGGCCCGTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CCA 72 bp | TTTCAAATTGTGGCAGCTATGGTTCAAGCTAGGGTTTaGGCAGTCAATGAATTATTTAAGCAGCATGAAGGG | + |
Preference number: 3 (lower is better) Translates to: FQIVAAMVQARV*AVNELFKQHEG Trigger: CCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGCTTGAACCATAGCTGCCACAATTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR TCA 90 bp | CTCATCCAGGGTCAGCCTGAGACTGGGTCTATCCGTGTCCTCCACAGGGCTCCCCGTTCGGGGTCTGAATaGAGGTCACGCCGCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LIQGQPETGSIRVLHRAPRSGSE*RSRRWV Trigger: CACCCAGCGGCGTGACCTTCATTCAGACCCCGAACG...GGGAGCCCTGTGGAGGACACGGATAGACCCAGTCTCAGGCTGACCCTGGATGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR TCA 90 bp | TCTCCAGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGGCTCCGGCTGTCCCCTaGATCCCCCTTCAGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: SPVVPTKRAAPCGRQGGKAPAVP*IPLQSL Trigger: CAAGGACTGAAGGGGGATTCAGGGGACAGCCGGAGC...CTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR CCA 90 bp | CTCATCCAGGGTCAGCCTGAGACTGGGTCTATCCGTGTCCTCCACAGGGCTCCCGATGGTGCCACCCGCTaGGCACAAACACCATCTCAC | + |
Preference number: 4 (lower is better) Translates to: LIQGQPETGSIRVLHRAPDGATR*AQTPSH Trigger: GTGAGATGGTGTTTGTGCCCAGCGGGTGGCACCATC...GGGAGCCCTGTGGAGGACACGGATAGACCCAGTCTCAGGCTGACCCTGGATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR TCA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGCGTTCGGGGTCTGAATaGAGGTCACGCCGCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: AQPGIVACVYPPPTGKDERSGSE*RSRRWV Trigger: CACCCAGCGGCGTGACCTTCATTCAGACCCCGAACG...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR TCA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGCTCCGGCTGTCCCCTaGATCCCCCTTCAGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: AQPGIVACVYPPPTGKDEAPAVP*IPLQSL Trigger: CAAGGACTGAAGGGGGATTCAGGGGACAGCCGGAGC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR GCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATACAGCCTGGAGCTCTTaGTGCAGGAAGTGCCACATG | + |
Preference number: 4 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHTAWSS*CRKCHM Trigger: CATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGT...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR CCA 90 bp | CTCATCCAGGGTCAGCCTGAGACTGGGTCTATCCGTGTCCTCCACAGGGCTCCCTGTGGTGCTGGATCTTaGGATACAGGTGGGTGTCCA | + |
Preference number: 4 (lower is better) Translates to: LIQGQPETGSIRVLHRAPCGAGS*DTGGCP Trigger: TGGACACCCACCTGTATCCCAAGATCCAGCACCACA...GGGAGCCCTGTGGAGGACACGGATAGACCCAGTCTCAGGCTGACCCTGGATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR TCA 90 bp | CTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGTGGCTCACATCCCGTTCGGGGTCTGAATaGAGGTCACGCCGCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LFRGPEFKIPATTRWLTSRSGSE*RSRRWV Trigger: CACCCAGCGGCGTGACCTTCATTCAGACCCCGAACG...GGATGTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR GCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGACCTGGCAGTGGTGGTaGCAGTCAGGCATGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWTWQWW*QSGMES Trigger: GGACTCCATGCCTGACTGGCACCACCACTGCCAGGT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATATCTTGGGATACAGGTaGGTGTCCAGGAGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHILGYR*VSRSSV Trigger: CACTGAGCTCCTGGACACCCACCTGTATCCCAAGAT...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATTCTTGCTGCAGGAAGTaGCACATGTTTGGCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHSCCRK*HMFGRL Trigger: CAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGA...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | AGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGCATTCTTCGACCTCATaGTGCACAGCCTGGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: SGPNQESCSLWQAGRKDRHSSTS*CTAWSS Trigger: AGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATG...CCTATCTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGGAGACCAGGTGCCCCTaGGGCCTGCATAGACAAAAC | + |
Preference number: 4 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWETRCP*GLHRQN Trigger: GTTTTGTCTATGCAGGCCCCAGGGGCACCTGGTCTC...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGCTCTTCTGGCTGTGGTaGGAATGCGCTGGTGTCCAC | + |
Preference number: 4 (lower is better) Translates to: VSSWWSMLQSRVNSRLSELFWLW*ECAGVH Trigger: GTGGACACCAGCGCATTCTCACCACAGCCAGAAGAG...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACGATGGTGCCACCCGCTaGGCACAAACACCATCTCAC | + |
Preference number: 4 (lower is better) Translates to: SQGELATLQHSTPPAVPHDGATR*AQTPSH Trigger: GTGAGATGGTGTTTGTGCCCAGCGGGTGGCACCATC...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACATGACCTGGCAGTGGTaGTGCCAGTCAGGCATGGAG | + |
Preference number: 4 (lower is better) Translates to: SQGELATLQHSTPPAVPHMTWQW*CQSGME Trigger: CTCCATGCCTGACTGGCACCACCACTGCCAGGTCAT...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGATGACCTGGCAGTGGTaGTGCCAGTCAGGCATGGAG | + |
Preference number: 4 (lower is better) Translates to: PLQAGEMVQQLRALTALQMTWQW*CQSGME Trigger: CTCCATGCCTGACTGGCACCACCACTGCCAGGTCAT...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGACTTCATGATGACCTaGCAGTGGTGGTGCCAGTCA | + |
Preference number: 4 (lower is better) Translates to: AQPGIVACVYPPPTGKDEDFMMT*QWWCQS Trigger: TGACTGGCACCACCACTGCCAGGTCATCATGAAGTC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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3UTR CAA 72 bp | CCATTCTTCGACCTCATGCTGCACAGCCTGGAGCTCTaGCTGCAGGAAGTGCCACATGTTTGGCAGGTTGCA | + |
Preference number: 4 (lower is better) Translates to: PFFDLMLHSLEL*LQEVPHVWQVA Trigger: TGCAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | AATTTCCAGAAGGGCCCTGGGCCTTCTGAAGAAGATGCTCTCCAGAATTCTTCCTCCAGGTTGTACACTTaGTGGTGCCACCCGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: NFQKGPGPSEEDALQNSSSRLYT*WCHPLG Trigger: GCCCAGCGGGTGGCACCATCAAGTGTACAACCTGGA...GGAAGAATTCTGGAGAGCATCTTCTTCAGAAGGCCCAGGGCCCTTCTGGAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | CATGGTGGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTCTCTGCAGCAGCCACTaGGTCCTCCAGCTGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: HGGVQTLVMWTHGGHEAILCSSH*VLQLLK Trigger: CTTCAGCAGCTGGAGGACGCAGTGGCTGCTGCAGAG...AATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACCACCATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTCTCTGCAGCAGCCACTaGGTCCTCCAGCTGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCLCSSH*VLQLLK Trigger: CTTCAGCAGCTGGAGGACGCAGTGGCTGCTGCAGAG...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | CTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGTGGCTCACATCCGGAGCGGAAGATGTCTaGATGGAAGGGAGACCAGGT | + |
Preference number: 4 (lower is better) Translates to: LFRGPEFKIPATTRWLTSGAEDV*MEGRPG Trigger: ACCTGGTCTCCCTTCCATGCAGACATCTTCCGCTCC...GGATGTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGATCTTGGGATACAGGTaGGTGTCCAGGAGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWILGYR*VSRSSV Trigger: CACTGAGCTCCTGGACACCCACCTGTATCCCAAGAT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | GCTCAGCCAGGCATAGTGGCATGTGTGTATCCTCCTCCCACTGGGAAGGATGAGGATAGTCATCCACATTaGGGACGTCCCAGAACTCAT | + |
Preference number: 4 (lower is better) Translates to: AQPGIVACVYPPPTGKDEDSHPH*GRPRTH Trigger: ATGAGTTCTGGGACGTCCTCAATGTGGATGACTATC...CTCATCCTTCCCAGTGGGAGGAGGATACACACATGCCACTATGCCTGGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | CATGGTGGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTTCTTCCCACAGATGTTaGCTGACCAGCAGGTGCCCC | + |
Preference number: 4 (lower is better) Translates to: HGGVQTLVMWTHGGHEAISSHRC*LTSRCP Trigger: GGGGCACCTGCTGGTCAGTCAACATCTGTGGGAAGA...AATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACCACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045279.13 |
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CDS-3UTR TCA 90 bp | GGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCCTCTTCTGGCTGTGGTaGGAATGCGCTGGTGTCCAC | + |
Preference number: 4 (lower is better) Translates to: GFLGMTGCVTGTRSCIRTLFWLW*ECAGVH Trigger: GTGGACACCAGCGCATTCTCACCACAGCCAGAAGAG...GGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCTAAGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCAACCTGGCAGTGGTGGTaGCAGTCAGGCATGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: ARVWAVNELFKQHEGAPPTWQWW*QSGMES Trigger: GGACTCCATGCCTGACTGGCACCACCACTGCCAGGT...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | TGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGTGTCCCTGCCCCTACCCACATAGGACATGTGCTCCTTaGGGTTTGAATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: CSLWQAGRKDRCPCPYPHRTCAP*GLNCIL Trigger: GAGAATACAATTCAAACCCCAAGGAGCACATGTCCT...ATGTGGGTAGGGGCAGGGACACCTATCTTTCCGCCCTGCCTGCCACAAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR CCA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGTGTGGTGCTGGATCTTaGGATACAGGTGGGTGTCCA | + |
Preference number: 4 (lower is better) Translates to: PLQAGEMVQQLRALTALQCGAGS*DTGGCP Trigger: TGGACACCCACCTGTATCCCAAGATCCAGCACCACA...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | GGCCTTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAAATGATGACCTGGCAGTaGTGGTGCCAGTCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: GLEGLPWRRMRLLPSSVQMMTWQ*WCQSGM Trigger: CATGCCTGACTGGCACCACCACTGCCAGGTCATCAT...TTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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3UTR CAA 72 bp | TGTATGACTTCAATGGGAAGGCTGTGGTGCTGGATCTaGGGATACAGGTGGGTGTCCAGGAGCTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: CMTSMGRLWCWI*GYRWVSRSSVE Trigger: TTCCACTGAGCTCCTGGACACCCACCTGTATCCCAAGATCCAGCACCACAGCCTTCCCATTGAAGTCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | AGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCCTACAAAGCTCATTCAGCCAGTCTaGCGAGAAGTACACGGGCAG | + |
Preference number: 4 (lower is better) Translates to: RDDRVCHWHKVLYKNPTKLIQPV*REVHGQ Trigger: CTGCCCGTGTACTTCTCGTCAGACTGGCTGAATGAG...CTTTGTAGGGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR GCA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGGCGTCTCCATACTTCTaGTGCAGATACTCGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWASPYF*CRYSKS Trigger: TGACTTCGAGTATCTGCAGCAGAAGTATGGAGACGC...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR GCA 90 bp | CCCCTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGTCGCGGAAGGACATGTaGTCCTTGGGGTTTGAATTG | + |
Preference number: 4 (lower is better) Translates to: PLQAGEMVQQLRALTALQSRKDM*SLGFEL Trigger: CAATTCAAACCCCAAGGAGCACATGTCCTTCCGCGA...CTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR GCA 90 bp | GGTGTGCAGACACTAGTCATGTGGACTCATGGAGGCCATGAAGCAATTGTCTGTACAGCCTGGAGCTCTTaGTGCAGGAAGTGCCACATG | + |
Preference number: 4 (lower is better) Translates to: GVQTLVMWTHGGHEAIVCTAWSS*CRKCHM Trigger: CATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGT...ACAGACAATTGCTTCATGGCCTCCATGAGTCCACATGACTAGTGTCTGCACACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAAACCAGCAGGTGCCCCTaGGGCCTGCATAGACAAAAC | + |
Preference number: 4 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQTSRCP*GLHRQN Trigger: GTTTTGTCTATGCAGGCCCCAGGGGCACCTGCTGGT...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045279.13 |
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CDS-3UTR CCA 90 bp | CTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGTGGCTCACATCCTGTCCAGGAGCTCAGTaGAAGTCACATCATAGGGCA | + |
Preference number: 4 (lower is better) Translates to: LFRGPEFKIPATTRWLTSCPGAQ*KSHHRA Trigger: TGCCCTATGATGTGACTTCCACTGAGCTCCTGGACA...GGATGTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACTCATTCAGCCAGTCTaGCGAGAAGTACACGGGCAG | + |
Preference number: 4 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQLIQPV*REVHGQ Trigger: CTGCCCGTGTACTTCTCGTCAGACTGGCTGAATGAG...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGGATAGTCATCCACATTaGGGACGTCCCAGAACTCAT | + |
Preference number: 4 (lower is better) Translates to: VSSWWSMLQSRVNSRLSEDSHPH*GRPRTH Trigger: ATGAGTTCTGGGACGTCCTCAATGTGGATGACTATC...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | AGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCCTACAAAGCACCAGGCTCCTGTATaGCTTCAATGGGAAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: RDDRVCHWHKVLYKNPTKHQAPV*LQWEGC Trigger: ACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTG...CTTTGTAGGGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | TTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATCATGCGTCCTCCAGCTGCTaGAGCAACTCTTCTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: LKDCHGEECDCSLVLYNHASSSC*SNSSGC Trigger: ACAGCCAGAAGAGTTGCTTCAGCAGCTGGAGGACGC...ATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | CTTCAGGCTGGAGAGATGGTTCAGCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCGCGGAAGGACATGTaGTCCTTGGGGTTTGAATTG | + |
Preference number: 4 (lower is better) Translates to: LQAGEMVQQLRALTALQRSRKDM*SLGFEL Trigger: CAATTCAAACCCCAAGGAGCACATGTCCTTCCGCGA...CCTCTGAAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR CCA 90 bp | GCTAGGGTTTGGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCAATGATGACCTGGCAGTaGTGGTGCCAGTCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: ARVWAVNELFKQHEGAPPMMTWQ*WCQSGM Trigger: CATGCCTGACTGGCACCACCACTGCCAGGTCATCAT...TGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCCAAACCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | AATTTCCAGAAGGGCCCTGGGCCTTCTGAAGAAGATGCTCTCCAGAATTCTTCCGACTTCATGATGACCTaGCAGTGGTGGTGCCAGTCA | + |
Preference number: 4 (lower is better) Translates to: NFQKGPGPSEEDALQNSSDFMMT*QWWCQS Trigger: TGACTGGCACCACCACTGCCAGGTCATCATGAAGTC...GGAAGAATTCTGGAGAGCATCTTCTTCAGAAGGCCCAGGGCCCTTCTGGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | GGCCTTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAAGATAGTCATCCACATTaGGGACGTCCCAGAACTCAT | + |
Preference number: 4 (lower is better) Translates to: GLEGLPWRRMRLLPSSVQDSHPH*GRPRTH Trigger: ATGAGTTCTGGGACGTCCTCAATGTGGATGACTATC...TTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | ATGCGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATGGCTGGTGTCCACTCTCTaGAAGTCAGGATTCACAACC | + |
Preference number: 4 (lower is better) Translates to: MRLLPSSVQSSLSWGLGWLVSTL*KSGFTT Trigger: GGTTGTGAATCCTGACTTTCAGAGAGTGGACACCAG...CCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACGCGTCCTCCAGCTGCTaGAGCAACTCTTCTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYASSSC*SNSSGC Trigger: ACAGCCAGAAGAGTTGCTTCAGCAGCTGGAGGACGC...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | ATGCGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATGGTCTTGCTGCAGGAAGTaGCACATGTTTGGCAGGTTG | + |
Preference number: 4 (lower is better) Translates to: MRLLPSSVQSSLSWGLGWSCCRK*HMFGRL Trigger: CAACCTGCCAAACATGTGGCACTTCCTGCAGCAAGA...CCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR GCA 90 bp | GGTTTCTTAGGGATGACAGGGTGTGTCACTGGCACAAGGTCCTGTATAAGAACCATATCAAATGCAGCCTaGTGTAGGCCCAGGTCTAGG | + |
Preference number: 4 (lower is better) Translates to: GFLGMTGCVTGTRSCIRTISNAA*CRPRSR Trigger: CCTAGACCTGGGCCTACAGCAGGCTGCATTTGATAT...GGTTCTTATACAGGACCTTGTGCCAGTGACACACCCTGTCATCCCTAAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CCA 90 bp | ATGCGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATGGGTGGTGAGAATGCGCTaGTGTCCACTCTCTGAAAGT | + |
Preference number: 4 (lower is better) Translates to: MRLLPSSVQSSLSWGLGWVVRMR*CPLSES Trigger: ACTTTCAGAGAGTGGACACCAGCGCATTCTCACCAC...CCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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3UTR CAA 72 bp | GTGGTTAATAGAAATGGTGTCATCCAGGTTGTACACTaGATGGTGCCACCCGCTGGGCACAAACACCATCTC | + |
Preference number: 4 (lower is better) Translates to: VVNRNGVIQVVH*MVPPAGHKHHL Trigger: GAGATGGTGTTTGTGCCCAGCGGGTGGCACCATCAAGTGTACAACCTGGATGACACCATTTCTATTAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTTCCAGGTTGTACACTTaGTGGTGCCACCCGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTSRLYT*WCHPLG Trigger: GCCCAGCGGGTGGCACCATCAAGTGTACAACCTGGA...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR GCA 90 bp | AATTTCCAGAAGGGCCCTGGGCCTTCTGAAGAAGATGCTCTCCAGAATTCTTCCGCGTCTCCATACTTCTaGTGCAGATACTCGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: NFQKGPGPSEEDALQNSSASPYF*CRYSKS Trigger: TGACTTCGAGTATCTGCAGCAGAAGTATGGAGACGC...GGAAGAATTCTGGAGAGCATCTTCTTCAGAAGGCCCAGGGCCCTTCTGGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR GCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGCATTCTTCGACCTCATaGTGCACAGCCTGGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMHSSTS*CTAWSS Trigger: AGAGCTCCAGGCTGTGCAGCATGAGGTCGAAGAATG...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR CCA 90 bp | GTCTCATCCTGGTGGTCTATGCTGCAGTCCAGAGTAAACAGCAGGCTCTCAGAGAGGACATGTGCTCCTTaGGGTTTGAATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: VSSWWSMLQSRVNSRLSERTCAP*GLNCIL Trigger: GAGAATACAATTCAAACCCCAAGGAGCACATGTCCT...CTCTGAGAGCCTGCTGTTTACTCTGGACTGCAGCATAGACCACCAGGATGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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3UTR CAA 72 bp | TGCAGGAAGTGCCACATGTTTGGCAGGTTGCAGCCATaGACCCAGTTGTGGTTAATAGAAATGGTGTCATCC | + |
Preference number: 4 (lower is better) Translates to: CRKCHMFGRLQP*TQLWLIEMVSS Trigger: GGATGACACCATTTCTATTAACCACAACTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCACTTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
3UTR CAA 72 bp | TCTGAAGAAGATGCTCTCCAGAATTCTTCCTGCATCTaGAGCTACAGCATACTAAAGGGCCTCTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: SEEDALQNSSCI*SYSILKGLCSS Trigger: GCTGCTGCAGAGGCCCTTTAGTATGCTGTAGCTCAAGATGCAGGAAGAATTCTGGAGAGCATCTTCTTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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CDS-3UTR GCA 90 bp | GATCTGACGCCCTGTTCTGGAGTGTCTGAAAACAGCTACAGGGTACTCACATATGCGTCTCCATACTTCTaGTGCAGATACTCGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: DLTPCSGVSENSYRVLTYASPYF*CRYSKS Trigger: TGACTTCGAGTATCTGCAGCAGAAGTATGGAGACGC...ATATGTGAGTACCCTGTAGCTGTTTTCAGACACTCCAGAACAGGGCGTCAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR GCA 90 bp | GGGCAGTCAATGAATTATTTAAGCAGCATGAAGGGGCTCCTCCACTTTGACATGATATCAAATGCAGCCTaGTGTAGGCCCAGGTCTAGG | + |
Preference number: 4 (lower is better) Translates to: GQSMNYLSSMKGLLHFDMISNAA*CRPRSR Trigger: CCTAGACCTGGGCCTACAGCAGGCTGCATTTGATAT...CATGTCAAAGTGGAGGAGCCCCTTCATGCTGCTTAAATAATTCATTGACTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR TCA 90 bp | CTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACCACACGGTGGCTCACATCCAAAATTCTTCAAAATTaGTCCCTGTGCAGGACTTCA | + |
Preference number: 4 (lower is better) Translates to: LFRGPEFKIPATTRWLTSKILQN*SLCRTS Trigger: TGAAGTCCTGCACAGGGATCAATTTTGAAGAATTTT...GGATGTGAGCCACCGTGTGGTTGCTGGGATTTTGAACTCAGGACCTCTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR TCA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTCCCACAGATGTTGACTaGCCAGCTGAAGGAGCGGAA | + |
Preference number: 4 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTPTDVD*PAEGAE Trigger: TTCCGCTCCTTCAGCTGGTCAGTCAACATCTGTGGG...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108777.10 |
||
CDS-3UTR CCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAGTGGTGAGAATGCGCTaGTGTCCACTCTCTGAAAGT | + |
Preference number: 4 (lower is better) Translates to: CEHTVAVFRDIRSKDPITVVRMR*CPLSES Trigger: ACTTTCAGAGAGTGGACACCAGCGCATTCTCACCAC...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
3UTR CAA 72 bp | TGCCACATGTTTGGCAGGTTGCAGCCATTGACCCAGTaGTGGTTAATAGAAATGGTGTCATCCAGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: CHMFGRLQPLTQ*WLIEMVSSRLY Trigger: GTACAACCTGGATGACACCATTTCTATTAACCACAACTGGGTCAATGGCTGCAACCTGCCAAACATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
||
CDS-3UTR TCA 90 bp | TATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTGACTCTCACCAGGCTCCTGTATaGCTTCAATGGGAAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: YLAGKGLEGFSKSLPTDSHQAPV*LQWEGC Trigger: ACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTG...AGAGTCAGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
3UTR CAA 72 bp | TTCATGACTACTACTCAATTCACATTCTTGGCAGGCTaGCTAGAGGCTAGATGGGTGAACATCTCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: FMTTTQFTFLAG*LEARWVNISLA Trigger: GGCTAGAGAGATGTTCACCCATCTAGCCTCTAGCAAGCCTGCCAAGAATGTGAATTGAGTAGTAGTCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CAA 72 bp | TCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTaGGATGGACCAGAACCTGGGTTTTTCAGCCATTTA | + |
Preference number: 4 (lower is better) Translates to: SLVLYNHLYPGD*DGPEPGFFSHL Trigger: TAAATGGCTGAAAAACCCAGGTTCTGGTCCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS-3UTR TCA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTCTGGTGTCCACTCTCTaGAAGTCAGGATTCACAACC | + |
Preference number: 4 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTLVSTL*KSGFTT Trigger: GGTTGTGAATCCTGACTTTCAGAGAGTGGACACCAG...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
CDS-3UTR CCA 90 bp | TTGAAGGACTGCCATGGAGAAGAATGCGACTGCTCCCTAGTTCTGTACAATCATAGGACATGTGCTCCTTaGGGTTTGAATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: LKDCHGEECDCSLVLYNHRTCAP*GLNCIL Trigger: GAGAATACAATTCAAACCCCAAGGAGCACATGTCCT...ATGATTGTACAGAACTAGGGAGCAGTCGCATTCTTCTCCATGGCAGTCCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CAA 72 bp | AAACCTGGTTTCATGACTACTACTCAATTCACATTCTaGGCAGGCTTGCTAGAGGCTAGATGGGTGAACATC | + |
Preference number: 4 (lower is better) Translates to: KPGFMTTTQFTF*AGLLEARWVNI Trigger: GATGTTCACCCATCTAGCCTCTAGCAAGCCTGCCAAGAATGTGAATTGAGTAGTAGTCATGAAACCAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CAA 72 bp | CTCTTAACTGCTGAGCCATTTCTCCAGCCCAGGTTATaGGTCTTTTATAAACCAACTTTTGGTTTCACTGCT | + |
Preference number: 4 (lower is better) Translates to: LLTAEPFLQPRL*VFYKPTFGFTA Trigger: AGCAGTGAAACCAAAAGTTGGTTTATAAAAGACCAATAACCTGGGCTGGAGAAATGGCTCAGCAGTTAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR TCA 90 bp | TGTGAGCACACTGTAGCTGTCTTCAGAGACATTAGGTCAAAGGATCCCATTACAAAAATTCTTCAAAATTaGTCCCTGTGCAGGACTTCA | + |
Preference number: 4 (lower is better) Translates to: CEHTVAVFRDIRSKDPITKILQN*SLCRTS Trigger: TGAAGTCCTGCACAGGGATCAATTTTGAAGAATTTT...TGTAATGGGATCCTTTGACCTAATGTCTCTGAAGACAGCTACAGTGTGCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
||
3UTR CAA 72 bp | CTCAGCTCAGACCTTGAAGGCTGTAGGTTTAGACAGTaGTCTGCAAAGATGTTCACAAATTCAGCATTATTT | + |
Preference number: 4 (lower is better) Translates to: LSSDLEGCRFRQ*SAKMFTNSALF Trigger: AAATAATGCTGAATTTGTGAACATCTTTGCAGACAACTGTCTAAACCTACAGCCTTCAAGGTCTGAGCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
3UTR CAA 72 bp | GGTAAGGCTTTAGCTGTCTTACAGATAGTTTGTATATaGTCACTTCATTTCTGGTATTCTCCGGTGTATTTT | + |
Preference number: 4 (lower is better) Translates to: GKALAVLQIVCI*SLHFWYSPVYF Trigger: AAAATACACCGGAGAATACCAGAAATGAAGTGACAATATACAAACTATCTGTAAGACAGCTAAAGCCTTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
||
CDS CCA 90 bp | GAAGGTCACGCCGCTGGGTGTGGGGCCGCCACCGCCGCTAGGGACTaGGTCTCGGAGGTCCCGGTAGTACCGCTCGGCAAAGGTGCGTGT | + |
Preference number: 5 (lower is better) Translates to: EGHAAGCGAATAARD*VSEVPVVPLGKGAC Trigger: ACACGCACCTTTGCCGAGCGGTACTACCGGGACCTCCGAGACCCAGTCCCTAGCGGCGGTGGCGGCCCCACACCCAGCGGCGTGACCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR CAA 90 bp | AGTGGTCCCAACCAAGAGAGCTGCTCCTTGTGGCAGGCAGGGCGGAAAGATAGGCACAGCCTGGAGCTCTaGCTGCAGGAAGTGCCACAT | + |
Preference number: 5 (lower is better) Translates to: SGPNQESCSLWQAGRKDRHSLEL*LQEVPH Trigger: ATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTG...CCTATCTTTCCGCCCTGCCTGCCACAAGGAGCAGCTCTCTTGGTTGGGACCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS CCA 90 bp | TGTGGTGCTGGATCTTGGGATACAGGTGGGTGTCCAGGAGCTCAGTaGAAGTCACATCATAGGGCAGGTTACCATGGCAGTCCCGGAGGG | + |
Preference number: 5 (lower is better) Translates to: CGAGSWDTGGCPGAQ*KSHHRAGYHGSPGG Trigger: CCCTCCGGGACTGCCATGGTAACCTGCCCTATGATGTGACTTCCACTGAGCTCCTGGACACCCACCTGTATCCCAAGATCCAGCACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CAA 90 bp | GTTCCCAGGCCTTACCCAGAAGGGTTTCTTAGGGATGACAGGGTGTGTCACTGGATCCCCCTTCAGTCCTaGCTCCAGGACAAGGAGCCT | + |
Preference number: 5 (lower is better) Translates to: VPRPYPEGFLRDDRVCHWIPLQS*LQDKEP Trigger: AGGCTCCTTGTCCTGGAGCAAGGACTGAAGGGGGAT...CCAGTGACACACCCTGTCATCCCTAAGAAACCCTTCTGGGTAAGGCCTGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CAA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACTTCTTCCCACAGATGTaGACTGACCAGCAGGTGCCC | + |
Preference number: 5 (lower is better) Translates to: SQGELATLQHSTPPAVPHFFPQM*TDQQVP Trigger: GGGCACCTGCTGGTCAGTCAACATCTGTGGGAAGAA...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045279.13 |
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CDS TCA 90 bp | CCCGCGAAGAGGAGTAACTCCCTTGGATGTAGTCCTTCCAGTAACTaGTATAGTCGCGGAAGGACATGTGCTCCTTGGGGTTTGAATTGT | + |
Preference number: 5 (lower is better) Translates to: PAKRSNSLGCSPSSN*YSRGRTCAPWGLNC Trigger: ACAATTCAAACCCCAAGGAGCACATGTCCTTCCGCGACTATATCAGTTACTGGAAGGACTACATCCAAGGGAGTTACTCCTCTTCGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 90 bp | CCCAGAACTCATTCAGCCAGTCTGACGAGAAGTACACGGGCAGGGTaGATATGTCTTCCAAGTCATTCACCAAGGAGTCTCTGCACAGAT | + |
Preference number: 5 (lower is better) Translates to: PRTHSASLTRSTRAG*ICLPSHSPRSLCTD Trigger: ATCTGTGCAGAGACTCCTTGGTGAATGACTTGGAAGACATATTCACCCTGCCCGTGTACTTCTCGTCAGACTGGCTGAATGAGTTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR CAA 90 bp | TCACAGGGTGAATTAGCTACTTTGCAGCACAGCACACCACCAGCTGTGCCTCACCAGCCATTGACCCAGTaGTGGTTAATAGAAATGGTG | + |
Preference number: 5 (lower is better) Translates to: SQGELATLQHSTPPAVPHQPLTQ*WLIEMV Trigger: CACCATTTCTATTAACCACAACTGGGTCAATGGCTG...GTGAGGCACAGCTGGTGGTGTGCTGTGCTGCAAAGTAGCTAATTCACCCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CAA 90 bp | ATGCGACTGCTCCCTAGTTCTGTACAATCATCTCTATCCTGGGGACTTGGATGGGGCAGGTTGCAGCCATaGACCCAGTTGTGGTTAATA | + |
Preference number: 5 (lower is better) Translates to: MRLLPSSVQSSLSWGLGWGRLQP*TQLWLI Trigger: TATTAACCACAACTGGGTCAATGGCTGCAACCTGCC...CCATCCAAGTCCCCAGGATAGAGATGATTGTACAGAACTAGGGAGCAGTCGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CAA 90 bp | GATTCTAGGGTTCAAACCGGCAACAGGTTTGCACAGCAAGTTAAGTACCTTTACCACAGCCTGGAGCTCTaGCTGCAGGAAGTGCCACAT | + |
Preference number: 5 (lower is better) Translates to: DSRVQTGNRFAQQVKYLYHSLEL*LQEVPH Trigger: ATGTGGCACTTCCTGCAGCAAGAGCTCCAGGCTGTG...GTAAAGGTACTTAACTTGCTGTGCAAACCTGTTGCCGGTTTGAACCCTAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS TCA 90 bp | ATAGTCATCCACATTGAGGACGTCCCAGAACTCATTCAGCCAGTCTaGCGAGAAGTACACGGGCAGGGTGAATATGTCTTCCAAGTCATT | + |
Preference number: 5 (lower is better) Translates to: IVIHIEDVPELIQPV*REVHGQGEYVFQVI Trigger: AATGACTTGGAAGACATATTCACCCTGCCCGTGTACTTCTCGTCAGACTGGCTGAATGAGTTCTGGGACGTCCTCAATGTGGATGACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS-3UTR CAA 90 bp | TGCCATTATTTAGCTGGCAAAGGGCTTGAAGGTTTTAGTAAATCTCTTCCCACTATCCCCCTTCAGTCCTaGCTCCAGGACAAGGAGCCT | + |
Preference number: 5 (lower is better) Translates to: CHYLAGKGLEGFSKSLPTIPLQS*LQDKEP Trigger: AGGCTCCTTGTCCTGGAGCAAGGACTGAAGGGGGAT...AGTGGGAAGAGATTTACTAAAACCTTCAAGCCCTTTGCCAGCTAAATAATGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS-3UTR CAA 90 bp | GCAGTTAAGAGCACTGACTGCTCTTCAGAGGTCCTGAGTTCAAAATCCCAGCAACAGCCATTGACCCAGTaGTGGTTAATAGAAATGGTG | + |
Preference number: 5 (lower is better) Translates to: AVKSTDCSSEVLSSKSQQQPLTQ*WLIEMV Trigger: CACCATTTCTATTAACCACAACTGGGTCAATGGCTG...TTGCTGGGATTTTGAACTCAGGACCTCTGAAGAGCAGTCAGTGCTCTTAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS CCA 72 bp | GCCGCTGGGTGTGGGGCCGCCACCGCCGCTAGGGACTaGGTCTCGGAGGTCCCGGTAGTACCGCTCGGCAAA | + |
Preference number: 6 (lower is better) Translates to: AAGCGAATAARD*VSEVPVVPLGK Trigger: TTTGCCGAGCGGTACTACCGGGACCTCCGAGACCCAGTCCCTAGCGGCGGTGGCGGCCCCACACCCAGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | CGAAGTCAGCATAGGAGAAGGCGTTCGGGGTCTGAATaGAGGTCACGCCGCTGGGTGTGGGGCCGCCACCGC | + |
Preference number: 6 (lower is better) Translates to: RSQHRRRRSGSE*RSRRWVWGRHR Trigger: GCGGTGGCGGCCCCACACCCAGCGGCGTGACCTTCATTCAGACCCCGAACGCCTTCTCCTATGCTGACTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS CCA 72 bp | GCAGTCCCGGAGGGCTTCCTCCTCGCCAGGTGCCCCTaGGGCCTGCATAGACAAAACGATAGTCATCCACAT | + |
Preference number: 6 (lower is better) Translates to: AVPEGFLLARCP*GLHRQNDSHPH Trigger: ATGTGGATGACTATCGTTTTGTCTATGCAGGCCCCAGGGGCACCTGGCGAGGAGGAAGCCCTCCGGGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147163.8 |
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CDS TCA 72 bp | CATTCACCAAGGAGTCTCTGCACAGATGCCAGTCCTTaGGGTAGAGGCAGCCCCGCGAAGAGGAGTAACTCC | + |
Preference number: 6 (lower is better) Translates to: HSPRSLCTDASP*GRGSPAKRSNS Trigger: GGAGTTACTCCTCTTCGCGGGGCTGCCTCTACCTCAAGGACTGGCATCTGTGCAGAGACTCCTTGGTGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS CCA 72 bp | GTTACCATGGCAGTCCCGGAGGGCTTCCTCCTCGCCTaGCGGGAAGAACAACCATTTCTTCTTCCCACAGAT | + |
Preference number: 6 (lower is better) Translates to: VTMAVPEGFLLA*REEQPFLLPTD Trigger: ATCTGTGGGAAGAAGAAATGGTTGTTCTTCCCGCCAGGCGAGGAGGAAGCCCTCCGGGACTGCCATGGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 |
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CDS TCA 72 bp | GCGGGAAGAACAACCATTTCTTCTTCCCACAGATGTTaGCTGACCAGCAGGTGCCCCTGGGGCCTGCATAGA | + |
Preference number: 6 (lower is better) Translates to: AGRTTISSSHRC*LTSRCPWGLHR Trigger: TCTATGCAGGCCCCAGGGGCACCTGCTGGTCAGTCAACATCTGTGGGAAGAAGAAATGGTTGTTCTTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045279.13 |
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CDS CAA 90 bp | CCAGTCCTTGAGGTAGAGGCAGCCCCGCGAAGAGGAGTAACTCCCTaGGATGTAGTCCTTCCAGTAACTGATATAGTCGCGGAAGGACAT | + |
Preference number: 6 (lower is better) Translates to: PVLEVEAAPRRGVTP*DVVLPVTDIVAEGH Trigger: ATGTCCTTCCGCGACTATATCAGTTACTGGAAGGACTACATCCAAGGGAGTTACTCCTCTTCGCGGGGCTGCCTCTACCTCAAGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | GATATAGTCGCGGAAGGACATGTGCTCCTTGGGGTTTaGATTGTATTCTCGCACTCCACAGTTGGCAACCGG | + |
Preference number: 6 (lower is better) Translates to: DIVAEGHVLLGV*IVFSHSTVGNR Trigger: CCGGTTGCCAACTGTGGAGTGCGAGAATACAATTCAAACCCCAAGGAGCACATGTCCTTCCGCGACTATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | CACATTGAGGACGTCCCAGAACTCATTCAGCCAGTCTaGCGAGAAGTACACGGGCAGGGTGAATATGTCTTC | + |
Preference number: 6 (lower is better) Translates to: HIEDVPELIQPV*REVHGQGEYVF Trigger: GAAGACATATTCACCCTGCCCGTGTACTTCTCGTCAGACTGGCTGAATGAGTTCTGGGACGTCCTCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | TGGGGCCTGCATAGACAAAACGATAGTCATCCACATTaGGGACGTCCCAGAACTCATTCAGCCAGTCTGACG | + |
Preference number: 6 (lower is better) Translates to: WGLHRQNDSHPH*GRPRTHSASLT Trigger: CGTCAGACTGGCTGAATGAGTTCTGGGACGTCCTCAATGTGGATGACTATCGTTTTGTCTATGCAGGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS CCA 72 bp | CCTTGGGGTTTGAATTGTATTCTCGCACTCCACAGTTaGCAACCGGTACAACCGCGTCTCCATACTTCTGCT | + |
Preference number: 6 (lower is better) Translates to: PWGLNCILALHS*QPVQPRLHTSA Trigger: AGCAGAAGTATGGAGACGCGGTTGTACCGGTTGCCAACTGTGGAGTGCGAGAATACAATTCAAACCCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS CAA 72 bp | TCCTTGGGGTTTGAATTGTATTCTCGCACTCCACAGTaGGCAACCGGTACAACCGCGTCTCCATACTTCTGC | + |
Preference number: 6 (lower is better) Translates to: SLGFELYSRTPQ*ATGTTASPYFC Trigger: GCAGAAGTATGGAGACGCGGTTGTACCGGTTGCCAACTGTGGAGTGCGAGAATACAATTCAAACCCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | AGGAGTAACTCCCTTGGATGTAGTCCTTCCAGTAACTaGTATAGTCGCGGAAGGACATGTGCTCCTTGGGGT | + |
Preference number: 6 (lower is better) Translates to: RSNSLGCSPSSN*YSRGRTCAPWG Trigger: ACCCCAAGGAGCACATGTCCTTCCGCGACTATATCAGTTACTGGAAGGACTACATCCAAGGGAGTTACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |
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CDS TCA 72 bp | CATTCAGCCAGTCTGACGAGAAGTACACGGGCAGGGTaGATATGTCTTCCAAGTCATTCACCAAGGAGTCTC | + |
Preference number: 6 (lower is better) Translates to: HSASLTRSTRAG*ICLPSHSPRSL Trigger: GAGACTCCTTGGTGAATGACTTGGAAGACATATTCACCCTGCCCGTGTACTTCTCGTCAGACTGGCTGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045279.13 ENSMUST00000108777.10 ENSMUST00000147163.8 |