Pregenerated sensors for JHY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032023Ensembl transcript IDs: ENSMUST00000034521.8, ENSMUST00000160120.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCATAAATTTATAGATGTGGAGTCAGTGGCTTTGACCATAAAGTaGTCTGCGGTGGATTTCCCTACACTTGTGGGATTTATGATTAAT | + |
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Preference number: 1 (lower is better) Translates to: PHKFIDVESVALTIK*SAVDFPTLVGFMIN Trigger: ATTAATCATAAATCCCACAAGTGTAGGGAAATCCACCGCAGATCACTTTATGGTCAAAGCCACTGACTCCACATCTATAAATTTATGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTACCACCATTAACTTCTaGACAGTGCAGACAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QKYYFGHVTSVTRSAKLITTINF*TVQTRV Trigger: CACCCTTGTCTGCACTGTGCAGAAGTTAATGGTGGT...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGAGCGCAAAGGTAGTTTaGCAAATCAGAAGATCCAAT | + |
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Preference number: 2 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSAKVV*QIRRSN Trigger: ATTGGATCTTCTGATTTGTCAAACTACCTTTGCGCT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGTTATGCTATGCTATaGTATGTTATGAAGAAGCGC | + |
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Preference number: 2 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICYAML*YVMKKR Trigger: GCGCTTCTTCATAACATAGCATAGCATAGCATAACA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR GCA 72 bp | TGCACAGTGCAGACAAGGGTGGCGGGCAGGCGGCAGTaGCAGCTTACCACTCACTGTGGAACTGTCTACTTT | + |
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Preference number: 3 (lower is better) Translates to: CTVQTRVAGRRQ*QLTTHCGTVYF Trigger: AAAGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCCTTGTCTGCACTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR TCA 72 bp | TTTATAGATGTGGAGTCAGTGGCTTTGACCATAAAGTaGTCTGCGGTGGATTTCCCTACACTTGTGGGATTT | + |
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Preference number: 3 (lower is better) Translates to: FIDVESVALTIK*SAVDFPTLVGF Trigger: AAATCCCACAAGTGTAGGGAAATCCACCGCAGATCACTTTATGGTCAAAGCCACTGACTCCACATCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTAAACCAAAGGCTTTATaGTCTAGCCATCTATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIKPKAL*SSHLSV Trigger: GACAGATAGATGGCTAGACAATAAAGCCTTTGGTTT...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTGAGCCCTCGCTGGGCTaGACCTCTGCCAGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTEPSLG*TSASCI Trigger: GATGCAGCTGGCAGAGGTGCAGCCCAGCGAGGGCTC...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCCAGAGAGCCCTCGCTaGGCTGCACCTCTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTPESPR*AAPLPA Trigger: AGCTGGCAGAGGTGCAGCCCAGCGAGGGCTCTCTGG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTGCTGGTGCTGTTCCATaGTCTGGGCAAGCCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTAGAVP*SGQAGS Trigger: ACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGC...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCCATGGATGGCTCTCTaGAAGGGTAGAGCGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTPWMAL*KGRAEP Trigger: TGGCTCCGCTCTACCCTTCCAGAGAGCCATCCATGG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTGTGCAGCCAGCTCATaGTTTGCTGAGGCATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTCAASS*FAEASA Trigger: TGCGGATGCCTCAGCAAAGCATGAGCTGGCTGCACA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTAAAGCAGCCACAGCCTaGTTTTCCCGCTCGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTKAATA*FSRSCL Trigger: CAGACACGAGCGGGAAAAGCAGGCTGTGGCTGCTTT...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCCTGGACAGGATAGGTaGGAGTATGATGCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTPGQDR*EYDAGQ Trigger: CTGGCCAGCATCATACTCCCACCTATCCTGTCCAGG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCAGGACTTAGCCTCTTaGGGGAGGCTTTCTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTQDLAS*GRLSES Trigger: GGATTCAGAAAGCCTCCCTCAAGAGGCTAAGTCCTG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCTCTTCTGTCTCACTTaGGCTGTCCTCCTCCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTLFCLT*AVLLQA Trigger: AGCTTGGAGGAGGACAGCCCAAGTGAGACAGAAGAG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTATCAAGGCTTGCTGGTaGTGTTCCATGATCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTIKACW*CSMIWA Trigger: TGCCCAGATCATGGAACAGCACCAGCAAGCCTTGAT...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTCCGCAGTCTGCCTTTaGTTCTGTGGTTGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTSAVCL*FCGCWK Trigger: TTTCCAGCAACCACAGAACCAAAGGCAGACTGCGGA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTGCATCAAGGCTTGCTaGTGCTGTTCCATGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTCIKAC*CCSMIW Trigger: CCAGATCATGGAACAGCACCAGCAAGCCTTGATGCA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTAAGGAGGCTTCGCTCTaGGGACTCTTCTTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTKEASL*GLFFSL Trigger: CAAAGAAAAGAAGAGTCCTCAGAGCGAAGCCTCCTT...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTTTGCATTTTGTCTCTaGCGGATGCAAAGTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTFAFCL*RMQSQV Trigger: GACCTGACTTTGCATCCGTCAGAGACAAAATGCAAA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTGCTACGTTCATACTTTaGGCTCAGAAATTCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTATFIL*AQKFAS Trigger: GGAAGCGAATTTCTGAGCCCAAAGTATGAACGTAGC...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTGATAGCCTTTCAGCTTaGAACTCTTTGTGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTDSLSA*NSLCCF Trigger: GAAGCAGCACAAAGAGTTCCAAGCTGAAAGGCTATC...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTCTTGGGACATTGCCTaGTTTTGTATCTTCGTACTG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTSWDIA*FCIFVL Trigger: CAGTACGAAGATACAAAATCAGGCAATGTCCCAAGA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTTTACTCTCGGTTTTTaGTGTCTGTGGTTTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTFTLGF*CLWFGQ Trigger: CTGTCCAAACCACAGACATCAAAAACCGAGAGTAAA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTCATGTTGTAATCCTTaGCTTGCTGTGCGTATTCTT | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTSCCNP*LAVRIL Trigger: AAGAATACGCACAGCAAGTCAAGGATTACAACATGA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCGTTCAGTCCTGAGATaGAGTTTTTATATAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GWRAGGSASLPLTVELSTRSVLR*SFYIKL Trigger: GAGCTTTATATAAAAACTCCATCTCAGGACTGAACG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTCTGCGCGGGCCACGTaGCCCCGGCAGGAAAACGTC | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLISARAT*PRQENV Trigger: GACGTTTTCCTGCCGGGGTCACGTGGCCCGCGCAGA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGTTTGGACTTCCTTCTaGGCGGGCCACGTGACCCCG | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIVWTSF*AGHVTP Trigger: CGGGGTCACGTGGCCCGCGCAGAAGGAAGTCCAAAC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGCTGTTCCATGATCTaGGCAAGCCGGGAGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICCSMI*ASRESG Trigger: GCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGACTGAGACAGGCCGCTaGATTTCTCCTCCTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMTETGR*ISPPGH Trigger: GTGACCAGGAGGAGAAATCCAGCGGCCTGTCTCAGT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCGGGCCATCTTCACCTaGTGTCTGTGGCTTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMRAIFT*CLWLLS Trigger: AGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTCGATGTGAAGGACTTTaGAAGCAGCCACAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIRCEGL*KQPQPA Trigger: AGCAGGCTGTGGCTGCTTTCAAAGTCCTTCACATCG...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGGTTCTTCTGGAAGGTTaGTGGCCATTGGCTGCATCG | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMVLLEG*WPLAAS Trigger: CGATGCAGCCAATGGCCAGCAACCTTCCAGAAGAAC...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTTTGTCTCTGACGGATaGAAAGTCAGGTCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIFVSDG*KVRSQA Trigger: GGCCTGGGACCTGACTTTGCATCCGTCAGAGACAAA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGCTTCTCCAGCCAATaGCTGCCCCTCCTCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICFSSQ*LPLLSF Trigger: AAAAGAGAGGAGGGGCAGCCATTGGCTGGAGAAGCA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGAAGGTTGCTGGCCATTaGCTGCATCGGAAGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMKVAGH*LHRKTD Trigger: GTCAGTCTTCCGATGCAGCCAATGGCCAGCAACCTT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCTTCTGGAAGGTTGCTaGCCATTGGCTGCATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMLLEGC*PLAASE Trigger: TTCCGATGCAGCCAATGGCCAGCAACCTTCCAGAAG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCCTTGGCAGTTCTTCTaGAAGGTTGCTGGCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMPWQFF*KVAGHW Trigger: CCAATGGCCAGCAACCTTCCAGAAGAACTGCCAAGG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTCCGAACCCTGGCCTTaGCAGTTCTTCTGGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLISEPWP*QFFWKV Trigger: AACCTTCCAGAAGAACTGCCAAGGCCAGGGTTCGGA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTCTGTTTCCGAACCCTaGCCTTGGCAGTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSVSEP*PWQFFW Trigger: CCAGAAGAACTGCCAAGGCCAGGGTTCGGAAACAGA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGAGCTGCTTTGCTCTCTaGTGCCATTTGTCCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSCFAL*CHLSSG Trigger: TCCTGAGGACAAATGGCATCAGAGAGCAAAGCAGCT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGGGGGACTCGTGTCTGTaGGGAAGTTCATTAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMGDSCL*GSSLKS Trigger: GGACTTTAATGAACTTCCTCACAGACACGAGTCCCC...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR TCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTCTGTGGCTTCTCTCTaGATTGAGCTGCGATTCACT | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLISVASL*IELRFT Trigger: AGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGACTCTTCTTTTCTTTaGCTTTCCCAGCGGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIDSSFL*LSQRRV Trigger: GACTCTCCGCTGGGAAAGGCAAAGAAAAGAAGAGTC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCTGGATTTCTCCTCCTaGTCACTGTCGCTTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMLDFSS*SLSLSS Trigger: AGAACTAAGCGACAGTGACCAGGAGGAGAAATCCAG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCCACAAAATATTGTTTaGACTTCCTTCTGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMPQNIV*TSFCAG Trigger: GCCCGCGCAGAAGGAAGTCCAAACAATATTTTGTGG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTTCACCTGGTGTCTGTaGCTTCTCTCTGAATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIFTWCL*LLSELS Trigger: GCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGGTGGTTTGGACAGAATaGACAGGGCCTTCATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMVVWTE*TGPSCC Trigger: ACAACATGAAGGCCCTGTCCATTCTGTCCAAACCAC...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTTGATGTCTGTGGTTTaGACAGAATGGACAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMLMSVV*TEWTGP Trigger: AGGCCCTGTCCATTCTGTCCAAACCACAGACATCAA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGCTTTTCTGTTCACTaGCTCTTCTGTCTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICFSVH*LFCLTW Trigger: CCAAGTGAGACAGAAGAGGCAGTGAACAGAAAAGCA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTCTCTCTGAATTGAGCTaGGATTCACTTTCTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLILSELS*DSLSTL Trigger: CAGGGTAGAAAGTGAATCGCAGCTCAATTCAGAGAG...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTCCCTGTTAGTGTTGTaGGCTGCTTTTCTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSLLVL*AAFLFT Trigger: AGTGAACAGAAAAGCAGCCCACAACACTAACAGGGA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCTGCCTTTGGTTCTGTaGTTGCTGGAAAGGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMLPLVL*LLERVI Trigger: AATAACCCTTTCCAGCAACCACAGAACCAAAGGCAG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGATCATATCGGAGGTCTaGGTATTTGTCTTCTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMIISEV*VFVFYL Trigger: CAGGTAGAAGACAAATACTCAGACCTCCGATATGAT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGTTCTTGGTAATTCTTaGGCTGCTTTGCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIVLGNS*AALLSD Trigger: ATCAGAGAGCAAAGCAGCTCAAGAATTACCAAGAAC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGATTCTTGAGCTGCTTTaGTCTCTGATGCCATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMILELL*SLMPFV Trigger: GACAAATGGCATCAGAGAGCAAAGCAGCTCAAGAAT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGACCTCTTGGGACATTaGCTGATTTTGTATCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIDLLGH*LILYLR Trigger: ACGAAGATACAAAATCAGGCAATGTCCCAAGAGGTC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTTTTGTTCTTCCAGTTaGGATCATATCGGAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMFCSSS*DHIGGL Trigger: CAGACCTCCGATATGATCCCAACTGGAAGAACAAAA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGATGTCTGAGGAAGAGTaGAATTTCCAGAGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMMSEEE*NFQSIS Trigger: AGAGATGCTCTGGAAATTCCACTCTTCCTCAGACAT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTCTTTGTCCTGGATTTaGTCCTTAATATCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSLSWI*SLISDQ Trigger: CTGGTCTGATATTAAGGACCAAATCCAGGACAAAGA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTCTGATTATTTTGACTaGCAACAAGCTCTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLISDYFD*QQALLS Trigger: GGACAAAAGAGCTTGTTGTCAGTCAAAATAATCAGA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGCTGCATTAACATTTaGATTTTGTCTCTGACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICCINI*ILSLTD Trigger: ATCCGTCAGAGACAAAATGCAAATGTTAATGCAGCA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGCCTTCTTTTTCACTGTaGCTTGAGTTCTTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMPSFSL*LEFLVF Trigger: GAAAACTAAGAACTCAAGGCACAGTGAAAAAGAAGG...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTCCATATCTTTGTCCTaGATTTGGTCCTTAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSISLS*IWSLIS Trigger: TGATATTAAGGACCAAATCCAGGACAAAGATATGGA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| 3UTR CAA 72 bp | ATGCTATGCTATGTTATGAAGAAGCGCAAAGGTAGTTaGACAAATCAGAAGATCCAATATAAAACCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLCYVMKKRKGS*TNQKIQYKTKG Trigger: GCCTTTGGTTTTATATTGGATCTTCTGATTTGTCAAACTACCTTTGCGCTTCTTCATAACATAGCATAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | GCTGCACCTCTGCCAGCTGCATCAAGGCTTGCTGGTGCTGTTCCATaGTCTGGGCAAGCCGGGAGTCTGGCGAGGCACTCGCGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPLPAASRLAGAVP*SGQAGSLARHSRVP Trigger: TGGAACCCGCGAGTGCCTCGCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 90 bp | ATGATGCTGGCCAGAGAGCCCTCGCTGGGCTGCACCTCTGCCAGCTaGATCAAGGCTTGCTGGTGCTGTTCCATGATCTGGGCAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MMLAREPSLGCTSAS*IKACWCCSMIWASR Trigger: CCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGAGGGCTCTCTGGCCAGCATCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 90 bp | TGGGAGTATGATGCTGGCCAGAGAGCCCTCGCTGGGCTGCACCTCTaGCAGCTGCATCAAGGCTTGCTGGTGCTGTTCCATGATCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WEYDAGQRALAGLHL*QLHQGLLVLFHDLG Trigger: GCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGAGGGCTCTCTGGCCAGCATCATACTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 90 bp | ACCTCTGCCAGCTGCATCAAGGCTTGCTGGTGCTGTTCCATGATCTaGGCAAGCCGGGAGTCTGGCGAGGCACTCGCGGGTTCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSASCIKACWCCSMI*ASRESGEALAGSMS Trigger: AGACATGGAACCCGCGAGTGCCTCGCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCCTCTTCTGTCTCACTaGGGCTGTCCTCCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTPLLSH*GCPPPS Trigger: GCTTGGAGGAGGACAGCCCAAGTGAGACAGAAGAGG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 90 bp | AGGATAGGTGGGAGTATGATGCTGGCCAGAGAGCCCTCGCTGGGCTaGACCTCTGCCAGCTGCATCAAGGCTTGCTGGTGCTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RIGGSMMLAREPSLG*TSASCIKACWCCSM Trigger: CATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGAGGGCTCTCTGGCCAGCATCATACTCCCACCTATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCGTCTCTGCCTGCGGTaGTTTGGCTGGCTTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTRLCLR*FGWLLC Trigger: ACAAAGAAGCCAGCCAAACAACCGCAGGCAGAGACG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTATCCGCAGTCTGCCTTaGGTTCTGTGGTTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTIRSLP*VLWLLE Trigger: TTCCAGCAACCACAGAACCAAAGGCAGACTGCGGAT...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTGTCTTCTACCTGATGTaGGCTGTGATTCACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTVFYLM*AVIHTS Trigger: GCTGGTGTGAATCACAGCCAACATCAGGTAGAAGAC...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCGTCGTTGTGTGAGCTaGAGCTCTTTAGGTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTRRCVS*SSLGTE Trigger: CTCAGTACCTAAAGAGCTCAAGCTCACACAACGACG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTCCTTTGGTTCTGTGGTaGCTGGAAAGGGTTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTPLVLW*LERVIL Trigger: CAGAATAACCCTTTCCAGCAACCACAGAACCAAAGG...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCGGGCAGGCGGCAGTGCCAGCTTACCACTCACTGTGGAACTGTCTACTTTTGATCAGGTAGATTaGGTGGTTTGGGTTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GWRAGGSASLPLTVELSTFDQVD*VVWVWG Trigger: TCCCCAAACCCAAACCACCAAATCTACCTGATCAAA...AGTAGACAGTTCCACAGTGAGTGGTAAGCTGGCACTGCCGCCTGCCCGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 90 bp | CCCGGCAGGAAAACGTCGTTGTGTGAGCTTGAGCTCTTTAGGTACTaGGACAGGCCGCTGGATTTCTCCTCCTGGTCACTGTCGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGRKTSLCELELFRY*DRPLDFSSWSLSLS Trigger: ACTAAGCGACAGTGACCAGGAGGAGAAATCCAGCGGCCTGTCTCAGTACCTAAAGAGCTCAAGCTCACACAACGACGTTTTCCTGCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 90 bp | TCCGAACCCTGGCCTTGGCAGTTCTTCTGGAAGGTTGCTGGCCATTaGCTGCATCGGAAGACTGACCTCTTGGGACATTGCCTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEPWPWQFFWKVAGH*LHRKTDLLGHCLIL Trigger: CAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATGGCCAGCAACCTTCCAGAAGAACTGCCAAGGCCAGGGTTCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 90 bp | ATTGGGGTTAGAAGCGTTCGTTTGTGCAGCCAGCTCATGCTTTGCTaGGGCATCCGCAGTCTGCCTTTGGTTCTGTGGTTGCTGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IGVRSVRLCSQLMLC*GIRSLPLVLWLLER Trigger: CCTTTCCAGCAACCACAGAACCAAAGGCAGACTGCGGATGCCTCAGCAAAGCATGAGCTGGCTGCACAAACGAACGCTTCTAACCCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 90 bp | TCTGAGGACTCTTCTTTTCTTTGCCTTTCCCAGCGGAGAGTCCCATaGATGGCTCTCTGGAAGGGTAGAGCGGAGCCAAAGGCAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEDSSFLCLSQRRVP*MALWKGRAEPKAGF Trigger: AAAACCTGCCTTTGGCTCCGCTCTACCCTTCCAGAGAGCCATCCATGGGACTCTCCGCTGGGAAAGGCAAAGAAAAGAAGAGTCCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 90 bp | CGGGAGTCTGGCGAGGCACTCGCGGGTTCCATGTCTGAGGAAGAGTaGAATTTCCAGAGCATCTCTATGTTCTTGTATTTCGTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RESGEALAGSMSEEE*NFQSISMFLYFVSA Trigger: GGCAGAGACGAAATACAAGAACATAGAGATGCTCTGGAAATTCCACTCTTCCTCAGACATGGAACCCGCGAGTGCCTCGCCAGACTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 90 bp | CGGGCCATCTTCACCTGGTGTCTGTGGCTTCTCTCTGAATTGAGCTaGGATTCACTTTCTACCCTGGACAGGATAGGTGGGAGTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAIFTWCLWLLSELS*DSLSTLDRIGGSMM Trigger: CATCATACTCCCACCTATCCTGTCCAGGGTAGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 90 bp | TCTTTTCTTTGCCTTTCCCAGCGGAGAGTCCCATGGATGGCTCTCTaGAAGGGTAGAGCGGAGCCAAAGGCAGGTTTTCTGAAGAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SFLCLSQRRVPWMAL*KGRAEPKAGFLKSY Trigger: ATAGCTCTTCAGAAAACCTGCCTTTGGCTCCGCTCTACCCTTCCAGAGAGCCATCCATGGGACTCTCCGCTGGGAAAGGCAAAGAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 90 bp | CGTCGTTGTGTGAGCTTGAGCTCTTTAGGTACTGAGACAGGCCGCTaGATTTCTCCTCCTGGTCACTGTCGCTTAGTTCTGAGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RRCVSLSSLGTETGR*ISPPGHCRLVLRRT Trigger: GGTTCTTCTCAGAACTAAGCGACAGTGACCAGGAGGAGAAATCCAGCGGCCTGTCTCAGTACCTAAAGAGCTCAAGCTCACACAACGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | CGAATTACTACGGGCCATCTTCACCTGGTGTCTGTGGCTTCTCTCTaGATTGAGCTGCGATTCACTTTCTACCCTGGACAGGATAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RITTGHLHLVSVASL*IELRFTFYPGQDRW Trigger: CCACCTATCCTGTCCAGGGTAGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCGTAGTAATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 90 bp | ACTTTGAAAGCAGCCACAGCCTGCTTTTCCCGCTCGTGTCTGCTCTaGAGGATCTCCAACAGGGAAATTTCTGGTAAGCCTCCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLKAATACFSRSCLL*RISNREISGKPPSF Trigger: AAAAGAAGGAGGCTTACCAGAAATTTCCCTGTTGGAGATCCTGCAGAGCAGACACGAGCGGGAAAAGCAGGCTGTGGCTGCTTTCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 90 bp | TCACGTCTCTTTTCTGATAGCCTTTCAGCTTGGAACTCTTTGTGCTaGTTCGCTTCCTGTGTCTCTTTCCTCTCTCCAGCTGAAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLFSDSLSAWNSLC*FASCVSFLSPAEAG Trigger: ACCTGCTTCAGCTGGAGAGAGGAAAGAGACACAGGAAGCGAAGCAGCACAAAGAGTTCCAAGCTGAAAGGCTATCAGAAAAGAGACGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | CCCCTCCTCTCTTTTGTTCTTCCAGTTGGGATCATATCGGAGGTCTaGGTATTTGTCTTCTACCTGATGTTGGCTGTGATTCACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLSFVLPVGIISEV*VFVFYLMLAVIHTS Trigger: GCTGGTGTGAATCACAGCCAACATCAGGTAGAAGACAAATACTCAGACCTCCGATATGATCCCAACTGGAAGAACAAAAGAGAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | TTCTCCTCCTGGTCACTGTCGCTTAGTTCTGAGAAGAACCCATTTTaGCGGGTGCTACGTTCATACTTTGGGCTCAGAAATTCGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSWSLSLSSEKNPF*RVLRSYFGLRNSLP Trigger: TGGAAGCGAATTTCTGAGCCCAAAGTATGAACGTAGCACCCGTCAAAATGGGTTCTTCTCAGAACTAAGCGACAGTGACCAGGAGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 90 bp | CCTGGTCACTGTCGCTTAGTTCTGAGAAGAACCCATTTTGACGGGTaGTACGTTCATACTTTGGGCTCAGAAATTCGCTTCCAAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGHCRLVLRRTHFDG*YVHTLGSEIRFQVR Trigger: CCTTACTTGGAAGCGAATTTCTGAGCCCAAAGTATGAACGTAGCACCCGTCAAAATGGGTTCTTCTCAGAACTAAGCGACAGTGACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | GTCCAAAGCCTTCTTCCGAGAAATCGCAGATTTACTCTCGGTTTTTaGTGTCTGTGGTTTGGACAGAATGGACAGGGCCTTCATGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VQSLLPRNRRFTLGF*CLWFGQNGQGLHVV Trigger: TACAACATGAAGGCCCTGTCCATTCTGTCCAAACCACAGACATCAAAAACCGAGAGTAAATCTGCGATTTCTCGGAAGAAGGCTTTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTTCCGAACCCTGGCCTaGGCAGTTCTTCTGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIFRTLA*AVLLEG Trigger: ACCTTCCAGAAGAACTGCCAAGGCCAGGGTTCGGAA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | TTGTCCTGGATTTGGTCCTTAATATCAGACCAGGACTTAGCCTCTTaGGGGAGGCTTTCTGAATCCGATTCTAAGGAGTCTTTTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSWIWSLISDQDLAS*GRLSESDSKESFEI Trigger: GATTTCAAAAGACTCCTTAGAATCGGATTCAGAAAGCCTCCCTCAAGAGGCTAAGTCCTGGTCTGATATTAAGGACCAAATCCAGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
||
| CDS GCA 90 bp | TTCAGTCCTGAGATGGAGTTTTTATATAAAGCTCTGTCTAAAGCCTaGTTAGGTGAAACGAAAGAGTCGGAGGTGACTTTGGGATTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSPEMEFLYKALSKA*LGETKESEVTLGLW Trigger: CCACAATCCCAAAGTCACCTCCGACTCTTTCGTTTCACCTAAGCAGGCTTTAGACAGAGCTTTATATAAAAACTCCATCTCAGGACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTGCCCCTCCTCTCTTTaGTTCTTCCAGTTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMCPSSL*FFQLGS Trigger: TGATCCCAACTGGAAGAACAAAAGAGAGGAGGGGCA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGGACTCTTCTTTTCTTaGCCTTTCCCAGCGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIGLFFS*PFPAES Trigger: ACTCTCCGCTGGGAAAGGCAAAGAAAAGAAGAGTCC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTGGCAGGAAAACGTCGTaGTGTGAGCTTGAGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIGRKTS*CELELF Trigger: AAAGAGCTCAAGCTCACACAACGACGTTTTCCTGCC...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTCGGAAGACTGACCTCTaGGGACATTGCCTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLIRKTDL*GHCLIL Trigger: CAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCG...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGGTTAGAAGCGTTCGTTaGTGCAGCCAGCTCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMVRSVR*CSQLML Trigger: AAGCATGAGCTGGCTGCACAAACGAACGCTTCTAAC...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTCAGCTTGGAACTCTTaGTGCTGCTTCGCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMSAWNS*CCFASC Trigger: ACAGGAAGCGAAGCAGCACAAAGAGTTCCAAGCTGA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTTTGATGTCTGTGGTTaGGACAGAATGGACAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMFDVCG*DRMDRA Trigger: GGCCCTGTCCATTCTGTCCAAACCACAGACATCAAA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 90 bp | ATCTTCGTACTGAGACAGATGTTCTTGGTAATTCTTGAGCTGCTTTaGTCTCTGATGCCATTTGTCCTCAGGATCCATGAAAGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFVLRQMFLVILELL*SLMPFVLRIHESVF Trigger: GAAAACACTTTCATGGATCCTGAGGACAAATGGCATCAGAGAGCAAAGCAGCTCAAGAATTACCAAGAACATCTGTCTCAGTACGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 90 bp | TCTGTGGTTTGGACAGAATGGACAGGGCCTTCATGTTGTAATCCTTaGCTTGCTGTGCGTATTCTTTTTGCTGCATTAACATTTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SVVWTEWTGPSCCNP*LAVRILFAALTFAF Trigger: AAATGCAAATGTTAATGCAGCAAAAAGAATACGCACAGCAAGTCAAGGATTACAACATGAAGGCCCTGTCCATTCTGTCCAAACCACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTTGCTACGTTCATACTTaGGGCTCAGAAATTCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLICYVHT*GSEIRF Trigger: GAAGCGAATTTCTGAGCCCAAAGTATGAACGTAGCA...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTATTATTTTGGACATGTTACCTCTGTGACGAGGTCAGCCAAACTCATTAGCATCTCTATGTTCTaGTATTTCGTCTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKYYFGHVTSVTRSAKLISISMF*YFVSAC Trigger: GCAGGCAGAGACGAAATACAAGAACATAGAGATGCT...AATGAGTTTGGCTGACCTCGTCACAGAGGTAACATGTCCAAAATAATACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGTGGCTTCTCTCTGAATaGAGCTGCGATTCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMWLLSE*SCDSLS Trigger: AGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCA...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGGTGTTTTCGACTTCTTaGTCATTCTGGACAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMVFSTS*SFWTVI Trigger: GATGACTGTCCAGAATGACAAAGAAGTCGAAAACAC...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACGAGGTCAGCCAAACTCATTTTCAGGAAAAACTGAAGTATGTACATATGATTAACATTTGCATTTaGTCTCTGACGGATGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CDEVSQTHFQEKLKYVHMINICI*SLTDAK Trigger: CTTTGCATCCGTCAGAGACAAAATGCAAATGTTAAT...CATATGTACATACTTCAGTTTTTCCTGAAAATGAGTTTGGCTGACCTCGTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | GGGAGTATGATGCTGGCCAGAGAGCCCTCGCTGGGCTaGACCTCTGCCAGCTGCATCAAGGCTTGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSMMLAREPSLG*TSASCIKACWC Trigger: GCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGAGGGCTCTCTGGCCAGCATCATACTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 72 bp | CTGCCAGCTGCATCAAGGCTTGCTGGTGCTGTTCCATaGTCTGGGCAAGCCGGGAGTCTGGCGAGGCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LPAASRLAGAVP*SGQAGSLARHS Trigger: CGAGTGCCTCGCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | GGCTGCACCTCTGCCAGCTGCATCAAGGCTTGCTGGTaGTGTTCCATGATCTGGGCAAGCCGGGAGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCTSASCIKACW*CSMIWASRESG Trigger: GCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | TCGCTGGGCTGCACCTCTGCCAGCTGCATCAAGGCTTaGTGGTGCTGTTCCATGATCTGGGCAAGCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLGCTSASCIKA*WCCSMIWASRE Trigger: CTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | AGCTGCATCAAGGCTTGCTGGTGCTGTTCCATGATCTaGGCAAGCCGGGAGTCTGGCGAGGCACTCGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCIKACWCCSMI*ASRESGEALAG Trigger: ACCCGCGAGTGCCTCGCCAGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | CTCGCTGGGCTGCACCTCTGCCAGCTGCATCAAGGCTaGCTGGTGCTGTTCCATGATCTGGGCAAGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAGLHLCQLHQG*LVLFHDLGKPG Trigger: TCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | CTGGGCTGCACCTCTGCCAGCTGCATCAAGGCTTGCTaGTGCTGTTCCATGATCTGGGCAAGCCGGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGCTSASCIKAC*CCSMIWASRES Trigger: AGACTCCCGGCTTGCCCAGATCATGGAACAGCACCAGCAAGCCTTGATGCAGCTGGCAGAGGTGCAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 90 bp | TGCGCGGGCCACGTGACCCCGGCAGGAAAACGTCGTTGTGTGAGCTaGAGCTCTTTAGGTACTGAGACAGGCCGCTGGATTTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CAGHVTPAGKRRCVS*SSLGTETGRWISPP Trigger: AGGAGGAGAAATCCAGCGGCCTGTCTCAGTACCTAAAGAGCTCAAGCTCACACAACGACGTTTTCCTGCCGGGGTCACGTGGCCCGCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | GAGCTGCGATTCACTTTCTACCCTGGACAGGATAGGTaGGAGTATGATGCTGGCCAGAGAGCCCTCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELRFTFYPGQDR*EYDAGQRALAG Trigger: CCCAGCGAGGGCTCTCTGGCCAGCATCATACTCCCACCTATCCTGTCCAGGGTAGAAAGTGAATCGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | CTTTTCTTTGCCTTTCCCAGCGGAGAGTCCCATGGATaGCTCTCTGGAAGGGTAGAGCGGAGCCAAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFFAFPSGESHG*LSGRVERSQRQ Trigger: CTGCCTTTGGCTCCGCTCTACCCTTCCAGAGAGCCATCCATGGGACTCTCCGCTGGGAAAGGCAAAGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | CCGGGAGTCTGGCGAGGCACTCGCGGGTTCCATGTCTaGGGAAGAGTGGAATTTCCAGAGCATCTCTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGVWRGTRGFHV*GRVEFPEHLYV Trigger: AACATAGAGATGCTCTGGAAATTCCACTCTTCCTCAGACATGGAACCCGCGAGTGCCTCGCCAGACTCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | GCAGCCACAGCCTGCTTTTCCCGCTCGTGTCTGCTCTaGAGGATCTCCAACAGGGAAATTTCTGGTAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AATACFSRSCLL*RISNREISGKP Trigger: AGGCTTACCAGAAATTTCCCTGTTGGAGATCCTGCAGAGCAGACACGAGCGGGAAAAGCAGGCTGTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | TGGCCTTGGCAGTTCTTCTGGAAGGTTGCTGGCCATTaGCTGCATCGGAAGACTGACCTCTTGGGACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: WPWQFFWKVAGH*LHRKTDLLGHC Trigger: GCAATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATGGCCAGCAACCTTCCAGAAGAACTGCCAAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | CACGTGACCCCGGCAGGAAAACGTCGTTGTGTGAGCTaGAGCTCTTTAGGTACTGAGACAGGCCGCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: HVTPAGKRRCVS*SSLGTETGRWI Trigger: AATCCAGCGGCCTGTCTCAGTACCTAAAGAGCTCAAGCTCACACAACGACGTTTTCCTGCCGGGGTCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | AGAAGCGTTCGTTTGTGCAGCCAGCTCATGCTTTGCTaGGGCATCCGCAGTCTGCCTTTGGTTCTGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSVRLCSQLMLC*GIRSLPLVLWL Trigger: CAACCACAGAACCAAAGGCAGACTGCGGATGCCTCAGCAAAGCATGAGCTGGCTGCACAAACGAACGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | GCAGCCAGCTCATGCTTTGCTGAGGCATCCGCAGTCTaGCTTTGGTTCTGTGGTTGCTGGAAAGGGTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: AASSCFAEASAV*LWFCGCWKGLF Trigger: GAATAACCCTTTCCAGCAACCACAGAACCAAAGGCAGACTGCGGATGCCTCAGCAAAGCATGAGCTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | TTGGGGTTAGAAGCGTTCGTTTGTGCAGCCAGCTCATaGTTTGCTGAGGCATCCGCAGTCTGCCTTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLEAFVCAASS*FAEASAVCLWF Trigger: GAACCAAAGGCAGACTGCGGATGCCTCAGCAAAGCATGAGCTGGCTGCACAAACGAACGCTTCTAACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 72 bp | GGCTGCTTTTCTGTTCACTGCCTCTTCTGTCTCACTTaGGCTGTCCTCCTCCAAGCTGTCAGGCTCCATATC | + |
|
Preference number: 6 (lower is better) Translates to: GCFSVHCLFCLT*AVLLQAVRLHI Trigger: GATATGGAGCCTGACAGCTTGGAGGAGGACAGCCCAAGTGAGACAGAAGAGGCAGTGAACAGAAAAGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
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| CDS CAA 90 bp | TTTCCTCTGTTTCCGAACCCTGGCCTTGGCAGTTCTTCTGGAAGGTaGCTGGCCATTGGCTGCATCGGAAGACTGACCTCTTGGGACATT | + |
|
Preference number: 6 (lower is better) Translates to: FPLFPNPGLGSSSGR*LAIGCIGRLTSWDI Trigger: AATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATGGCCAGCAACCTTCCAGAAGAACTGCCAAGGCCAGGGTTCGGAAACAGAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 72 bp | TGCCTGCGGTTGTTTGGCTGGCTTCTTTGTCTTCGTTaGCCTGTGTGTGTTCATGTGGTGATCGGACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLRLFGWLLCLR*PVCVHVVIGLR Trigger: CCTCAGTCCGATCACCACATGAACACACACAGGTCAACGAAGACAAAGAAGCCAGCCAAACAACCGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 72 bp | ACGGGCCATCTTCACCTGGTGTCTGTGGCTTCTCTCTaGATTGAGCTGCGATTCACTTTCTACCCTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: TGHLHLVSVASL*IELRFTFYPGQ Trigger: CTGTCCAGGGTAGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS GCA 72 bp | TCTGCAGACCCTGGTAATGCTTCTCCAGCCAATGGCTaGCCCTCCTCTCTTTTGTTCTTCCAGTTGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SADPGNASPANG*PSSLLFFQLGS Trigger: TGATCCCAACTGGAAGAACAAAAGAGAGGAGGGGCAGCCATTGGCTGGAGAAGCATTACCAGGGTCTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CAA 72 bp | CTGCCTGCGGTTGTTTGGCTGGCTTCTTTGTCTTCGTaGACCTGTGTGTGTTCATGTGGTGATCGGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPAVVWLASLSS*TCVCSCGDRTE Trigger: CTCAGTCCGATCACCACATGAACACACACAGGTCAACGAAGACAAAGAAGCCAGCCAAACAACCGCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CAA 90 bp | TTACTACGGGCCATCTTCACCTGGTGTCTGTGGCTTCTCTCTGAATaGAGCTGCGATTCACTTTCTACCCTGGACAGGATAGGTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLRAIFTWCLWLLSE*SCDSLSTLDRIGGS Trigger: ACTCCCACCTATCCTGTCCAGGGTAGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCGTAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS TCA 72 bp | AAAACGTCGTTGTGTGAGCTTGAGCTCTTTAGGTACTaGGACAGGCCGCTGGATTTCTCCTCCTGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: KTSLCELELFRY*DRPLDFSSWSL Trigger: CAGTGACCAGGAGGAGAAATCCAGCGGCCTGTCTCAGTACCTAAAGAGCTCAAGCTCACACAACGACGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CAA 72 bp | GGGCTGTCCTCCTCCAAGCTGTCAGGCTCCATATCTTaGTCCTGGATTTGGTCCTTAATATCAGACCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSSSKLSGSIS*SWIWSLISDQD Trigger: GTCCTGGTCTGATATTAAGGACCAAATCCAGGACAAAGATATGGAGCCTGACAGCTTGGAGGAGGACAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
||
| CDS CAA 72 bp | AATGCTTCTCCAGCCAATGGCTGCCCCTCCTCTCTTTaGTTCTTCCAGTTGGGATCATATCGGAGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NASPANGCPSSL*FFQLGSYRRSE Trigger: CTCAGACCTCCGATATGATCCCAACTGGAAGAACAAAAGAGAGGAGGGGCAGCCATTGGCTGGAGAAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CAA 90 bp | GACCCTGGTAATGCTTCTCCAGCCAATGGCTGCCCCTCCTCTCTTTaGTTCTTCCAGTTGGGATCATATCGGAGGTCTGAGTATTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DPGNASPANGCPSSL*FFQLGSYRRSEYLS Trigger: AGACAAATACTCAGACCTCCGATATGATCCCAACTGGAAGAACAAAAGAGAGGAGGGGCAGCCATTGGCTGGAGAAGCATTACCAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 72 bp | GGCGAGGCACTCGCGGGTTCCATGTCTGAGGAAGAGTaGAATTTCCAGAGCATCTCTATGTTCTTGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: GEALAGSMSEEE*NFQSISMFLYF Trigger: GAAATACAAGAACATAGAGATGCTCTGGAAATTCCACTCTTCCTCAGACATGGAACCCGCGAGTGCCTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CAA 72 bp | GTTGCTGGCCATTGGCTGCATCGGAAGACTGACCTCTaGGGACATTGCCTGATTTTGTATCTTCGTACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VAGHWLHRKTDL*GHCLILYLRTE Trigger: CTCAGTACGAAGATACAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATGGCCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
||
| CDS CCA 72 bp | TCCTCCTCCAAGCTGTCAGGCTCCATATCTTTGTCCTaGATTTGGTCCTTAATATCAGACCAGGACTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSKLSGSISLS*IWSLISDQDLA Trigger: GGCTAAGTCCTGGTCTGATATTAAGGACCAAATCCAGGACAAAGATATGGAGCCTGACAGCTTGGAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
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| CDS CCA 72 bp | TCCGAATTACTACGGGCCATCTTCACCTGGTGTCTGTaGCTTCTCTCTGAATTGAGCTGCGATTCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SELLRAIFTWCL*LLSELSCDSLS Trigger: AGAAAGTGAATCGCAGCTCAATTCAGAGAGAAGCCACAGACACCAGGTGAAGATGGCCCGTAGTAATTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | GAGGAAGAGTGGAATTTCCAGAGCATCTCTATGTTCTaGTATTTCGTCTCTGCCTGCGGTTGTTTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: EEEWNFQSISMF*YFVSACGCLAG Trigger: GCCAGCCAAACAACCGCAGGCAGAGACGAAATACAAGAACATAGAGATGCTCTGGAAATTCCACTCTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 90 bp | TTCTGGAAGGTTGCTGGCCATTGGCTGCATCGGAAGACTGACCTCTaGGGACATTGCCTGATTTTGTATCTTCGTACTGAGACAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FWKVAGHWLHRKTDL*GHCLILYLRTETDV Trigger: AACATCTGTCTCAGTACGAAGATACAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATGGCCAGCAACCTTCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 90 bp | CAAGCTTCACGTCTCTTTTCTGATAGCCTTTCAGCTTGGAACTCTTaGTGCTGCTTCGCTTCCTGTGTCTCTTTCCTCTCTCCAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: QASRLFSDSLSAWNS*CCFASCVSFLSPAE Trigger: TTCAGCTGGAGAGAGGAAAGAGACACAGGAAGCGAAGCAGCACAAAGAGTTCCAAGCTGAAAGGCTATCAGAAAAGAGACGTGAAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | TTTTCTGATAGCCTTTCAGCTTGGAACTCTTTGTGCTaGTTCGCTTCCTGTGTCTCTTTCCTCTCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSDSLSAWNSLC*FASCVSFLSPA Trigger: AGCTGGAGAGAGGAAAGAGACACAGGAAGCGAAGCAGCACAAAGAGTTCCAAGCTGAAAGGCTATCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | CTCTTTTCTGATAGCCTTTCAGCTTGGAACTCTTTGTaGTGCTTCGCTTCCTGTGTCTCTTTCCTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LFSDSLSAWNSL*CFASCVSFLSP Trigger: TGGAGAGAGGAAAGAGACACAGGAAGCGAAGCAGCACAAAGAGTTCCAAGCTGAAAGGCTATCAGAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CCA 72 bp | CTATGTTCTTGTATTTCGTCTCTGCCTGCGGTTGTTTaGCTGGCTTCTTTGTCTTCGTTGACCTGTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LCSCISSLPAVV*LASLSSLTCVC Trigger: ACACACACAGGTCAACGAAGACAAAGAAGCCAGCCAAACAACCGCAGGCAGAGACGAAATACAAGAACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | CTCCAAGCTGTCAGGCTCCATATCTTTGTCCTGGATTaGGTCCTTAATATCAGACCAGGACTTAGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LQAVRLHIFVLD*VLNIRPGLSLL Trigger: CAAGAGGCTAAGTCCTGGTCTGATATTAAGGACCAAATCCAGGACAAAGATATGGAGCCTGACAGCTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
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| CDS CAA 72 bp | TCTATGTTCTTGTATTTCGTCTCTGCCTGCGGTTGTTaGGCTGGCTTCTTTGTCTTCGTTGACCTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SMFLYFVSACGC*AGFFVFVDLCV Trigger: CACACACAGGTCAACGAAGACAAAGAAGCCAGCCAAACAACCGCAGGCAGAGACGAAATACAAGAACATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 90 bp | AGTCCAAAGCCTTCTTCCGAGAAATCGCAGATTTACTCTCGGTTTTaGATGTCTGTGGTTTGGACAGAATGGACAGGGCCTTCATGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SPKPSSEKSQIYSRF*MSVVWTEWTGPSCC Trigger: ACAACATGAAGGCCCTGTCCATTCTGTCCAAACCACAGACATCAAAAACCGAGAGTAAATCTGCGATTTCTCGGAAGAAGGCTTTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | CTTCTTCCGAGAAATCGCAGATTTACTCTCGGTTTTTaGTGTCTGTGGTTTGGACAGAATGGACAGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LLPRNRRFTLGF*CLWFGQNGQGL Trigger: AAGGCCCTGTCCATTCTGTCCAAACCACAGACATCAAAAACCGAGAGTAAATCTGCGATTTCTCGGAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | CATTGGCTGCATCGGAAGACTGACCTCTTGGGACATTaGCTGATTTTGTATCTTCGTACTGAGACAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: HWLHRKTDLLGH*LILYLRTETDV Trigger: AACATCTGTCTCAGTACGAAGATACAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCGATGCAGCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | TTTCCAGAGCATCTCTATGTTCTTGTATTTCGTCTCTaGCTGCGGTTGTTTGGCTGGCTTCTTTGTCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: FPEHLYVLVFRL*LRLFGWLLCLR Trigger: ACGAAGACAAAGAAGCCAGCCAAACAACCGCAGGCAGAGACGAAATACAAGAACATAGAGATGCTCTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | AGAAGAACCCATTTTGACGGGTGCTACGTTCATACTTaGGGCTCAGAAATTCGCTTCCAAGTAAGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RRTHFDGCYVHT*GSEIRFQVRRL Trigger: AAGCCTCCTTACTTGGAAGCGAATTTCTGAGCCCAAAGTATGAACGTAGCACCCGTCAAAATGGGTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | ATTTGGTCCTTAATATCAGACCAGGACTTAGCCTCTTaGGGGAGGCTTTCTGAATCCGATTCTAAGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IWSLISDQDLAS*GRLSESDSKES Trigger: AGACTCCTTAGAATCGGATTCAGAAAGCCTCCCTCAAGAGGCTAAGTCCTGGTCTGATATTAAGGACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034521.8 ENSMUST00000160120.2 |
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| CDS TCA 72 bp | GCTTTGCTCTCTGATGCCATTTGTCCTCAGGATCCATaGAAGTGTTTTCGACTTCTTTGTCATTCTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: ALLSDAICPQDP*KCFRLLCHSGQ Trigger: CTGTCCAGAATGACAAAGAAGTCGAAAACACTTTCATGGATCCTGAGGACAAATGGCATCAGAGAGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS GCA 72 bp | CTGAGACAGATGTTCTTGGTAATTCTTGAGCTGCTTTaGTCTCTGATGCCATTTGTCCTCAGGATCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: LRQMFLVILELL*SLMPFVLRIHE Trigger: TTCATGGATCCTGAGGACAAATGGCATCAGAGAGCAAAGCAGCTCAAGAATTACCAAGAACATCTGTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | TATCTTCGTACTGAGACAGATGTTCTTGGTAATTCTTaGGCTGCTTTGCTCTCTGATGCCATTTGTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: YLRTETDVLGNS*AALLSDAICPQ Trigger: CTGAGGACAAATGGCATCAGAGAGCAAAGCAGCTCAAGAATTACCAAGAACATCTGTCTCAGTACGAAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | TGGACAGAATGGACAGGGCCTTCATGTTGTAATCCTTaGCTTGCTGTGCGTATTCTTTTTGCTGCATTAACA | + |
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Preference number: 6 (lower is better) Translates to: WTEWTGPSCCNP*LAVRILFAALT Trigger: TGTTAATGCAGCAAAAAGAATACGCACAGCAAGTCAAGGATTACAACATGAAGGCCCTGTCCATTCTGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS CAA 72 bp | CATCGGAAGACTGACCTCTTGGGACATTGCCTGATTTaGTATCTTCGTACTGAGACAGATGTTCTTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HRKTDLLGHCLI*YLRTETDVLGN Trigger: ATTACCAAGAACATCTGTCTCAGTACGAAGATACAAAATCAGGCAATGTCCCAAGAGGTCAGTCTTCCGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | TCTTTTGTTCTTCCAGTTGGGATCATATCGGAGGTCTaGGTATTTGTCTTCTACCTGATGTTGGCTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: SFVLPVGIISEV*VFVFYLMLAVI Trigger: AATCACAGCCAACATCAGGTAGAAGACAAATACTCAGACCTCCGATATGATCCCAACTGGAAGAACAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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| CDS TCA 72 bp | GTGGTTGCTGGAAAGGGTTATTCTGATTATTTTGACTaGCAACAAGCTCTTTTGTCCCAAGAGATTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VVAGKGYSDYFD*QQALLSQEISG Trigger: GCCTGAAATCTCTTGGGACAAAAGAGCTTGTTGTCAGTCAAAATAATCAGAATAACCCTTTCCAGCAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034521.8 |
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