Pregenerated sensors for JDP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034271Ensembl transcript IDs: ENSMUST00000050687.14, ENSMUST00000171754.3, ENSMUST00000177587.9
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTaGAGCCCCACAGTGCACCCCCTTCCACTGGGCTTGGGCAGGGCT | + |
Preference number: 1 (lower is better) Translates to: RAPAPLCRSQLQLGH*SPTVHPLPLGLGRA Trigger: AGCCCTGCCCAAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 90 bp | GCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTaGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGCTTGG | + |
Preference number: 1 (lower is better) Translates to: ALEGRPRLCAAANSS*AIAAPQCTPFHWAW Trigger: CCAAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 90 bp | GAGTGCCTGAGGCTACTACCTGGTTTGGCACCTCTCTGGCTCAGGTaGTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCCCTATCTGCGG | + |
Preference number: 1 (lower is better) Translates to: ECLRLLPGLAPLWLR*SSSWALEWDSPYLR Trigger: CCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 90 bp | TTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTaGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGG | + |
Preference number: 1 (lower is better) Translates to: LAPLWLRCSSSWALE*DSPYLRVNLGLSTW Trigger: CCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 90 bp | TCAGTAGTCCCCTGGGTGGGGGTCTTGGCAGAGAGGCCAAAGGAGTaGCTGAGGCTACTACCTGGTTTGGCACCTCTCTGGCTCAGGTGC | + |
Preference number: 1 (lower is better) Translates to: SVVPWVGVLAERPKE*LRLLPGLAPLWLRC Trigger: GCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGGGGACTACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 90 bp | CTGGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTaGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCA | + |
Preference number: 1 (lower is better) Translates to: LVWHLSGSGALQAGP*SGTAPICGSTLVSA Trigger: TGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 90 bp | TCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCCCTATCTaGGGGTCAACCTTGGTCTCAGCACCTGGTCCCTCTGGTTTCTTC | + |
Preference number: 1 (lower is better) Translates to: SGALQAGPWSGTAPI*GSTLVSAPGPSGFF Trigger: GAAGAAACCAGAGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR TCA 90 bp | CCACTGGGCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTaGGTTCCATCCGCGGGCCACACTGTGTTTGCAATGCATGGCTTT | + |
Preference number: 1 (lower is better) Translates to: PLGLGRAGEVDCSLC*VPSAGHTVFAMHGF Trigger: AAAGCCATGCATTGCAAACACAGTGTGGCCCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGCCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 90 bp | AAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATaGCAGCCCCACAGTGCACCCCCTTCCACTGGGCTTGGGCAGGGC | + |
Preference number: 2 (lower is better) Translates to: KGARASVPQPTPAGP*QPHSAPPSTGLGQG Trigger: GCCCTGCCCAAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR TCA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCGGCCAAAGGAGTGCCTaGGGCTACTACCTGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPGQRSA*GYYLVW Trigger: CCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCC...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | CAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGAGGTGCTCTTCAAGCTaGGCCCTGGAGTGGGACAGC | + |
Preference number: 2 (lower is better) Translates to: QPTPAGPLQPHSAPPSTGRCSSS*ALEWDS Trigger: GCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCT...CCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR TCA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGGCCAAAGGAGTGCCTaGGGCTACTACCTGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: VCALEGRPRLCAAANSSWGQRSA*GYYLVW Trigger: CCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCC...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | TGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCAGTTTGTCACGTGCCTaGGAGGGGCCCTCTGTCACC | + |
Preference number: 2 (lower is better) Translates to: WHLSGSGALQAGPWSGTASLSRA*EGPSVT Trigger: GGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACT...GGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | CAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGTCTGCGGGTCAACCTTaGTCTCAGCACCTGGTCCCT | + |
Preference number: 2 (lower is better) Translates to: QPTPAGPLQPHSAPPSTGSAGQP*SQHLVP Trigger: AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGA...CCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCATGGCTTTTCTTGGCTaGTCAGTAGTCCCCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPMAFLG*SVVPWV Trigger: CACCCAGGGGACTACTGAGCAGCCAAGAAAAGCCAT...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 90 bp | GTCTTGGCAGAGAGGCCAAAGGAGTGCCTGAGGCTACTACCTGGTTaGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAG | + |
Preference number: 2 (lower is better) Translates to: VLAERPKECLRLLPG*APLWLRCSSSWALE Trigger: CTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTCTGCCAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGATAGAGTTTGTCACGTaGCTGGGAGGGGCCCTCTGT | + |
Preference number: 2 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRIEFVT*LGGALC Trigger: ACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGGGCTACTACCTGGTTTaGCACCTCTCTGGCTCAGGT | + |
Preference number: 2 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRGYYLV*HLSGSG Trigger: ACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCC...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGGGCCCTCTGTCACCTTaGTCGTCCTCTTTCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRGPLSP*SSSFSF Trigger: AAAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCC...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTGGCCCTCTGTCACCTTaGTCGTCCTCTTTCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: GVGQPLSAGQPWSQHLVPGPLSP*SSSFSF Trigger: AAAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCC...AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGTGTGTTTGCAATGCATaGCTTTTCTTGGCTGCTCAG | + |
Preference number: 2 (lower is better) Translates to: VCALEGRPRLCAAANSSWCVCNA*LFLAAQ Trigger: CTGAGCAGCCAAGAAAAGCCATGCATTGCAAACACA...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 90 bp | GTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAACATTCATaGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCG | + |
Preference number: 2 (lower is better) Translates to: VQLEAPPGQPVCKHS*IKYVLWKGARASVP Trigger: CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTTACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | TTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGGGCCCTCTGTCACCTTaGTCGTCCTCTTTCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: FGTSLAQVLFKLGPGVGQGPLSP*SSSFSF Trigger: AAAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCC...CTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCCTCTCTGGCTCAGGTaGTCTTCAAGCTGGGCCCTG | + |
Preference number: 2 (lower is better) Translates to: KHSLIKYVLWKGARASVPPLWLR*SSSWAL Trigger: CAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGG...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACCCGCCTGGGAGAGGCCAAAGGAGTaGCTGAGGCTACTACCTGGT | + |
Preference number: 2 (lower is better) Translates to: GLGTRKGLQGWKCTSPAWERPKE*LRLLPG Trigger: ACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTC...CCAGGCGGGTGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGATTGCAGCCCCACAGTaGACCCCCTTCCACTGGGCT | + |
Preference number: 2 (lower is better) Translates to: KHSLIKYVLWKGARASVPIAAPQ*TPFHWA Trigger: AGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAAT...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCATTGCAGCCCCACAGTaGACCCCCTTCCACTGGGCT | + |
Preference number: 2 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVIAAPQ*TPFHWA Trigger: AGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAAT...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGTGTGTTTGCAATGCATaGCTTTTCTTGGCTGCTCAG | + |
Preference number: 2 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRCVCNA*LFLAAQ Trigger: CTGAGCAGCCAAGAAAAGCCATGCATTGCAAACACA...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 90 bp | TGGATTGCAGTCTATGCTGAGTTCCATCCGCGGGCCACACTGTGTTaGCAATGCATGGCTTTTCTTGGCTGCTCAGTAGTCCCCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: WIAVYAEFHPRATLC*QCMAFLGCSVVPWV Trigger: CACCCAGGGGACTACTGAGCAGCCAAGAAAAGCCATGCATTGCAAACACAGTGTGGCCCGCGGATGGAACTCAGCATAGACTGCAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTCTGCGGGTCAACCTTaGTCTCAGCACCTGGTCCCT | + |
Preference number: 2 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVSAGQP*SQHLVP Trigger: AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGA...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | ATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAACATTCCTGGGTGGGGGTCTTaGCAGAGAGGCCAAAGGAGT | + |
Preference number: 2 (lower is better) Translates to: IKTVCSWKPRQDSQSVNIPGWGS*QRGQRS Trigger: ACTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGG...AATGTTTACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTTGCTCAGTAGTCCCCTaGGTGGGGGTCTTGGCAGAG | + |
Preference number: 2 (lower is better) Translates to: KESIKTVCSWKPRQDSQSCSVVP*VGVLAE Trigger: CTCTGCCAAGACCCCCACCCAGGGGACTACTGAGCA...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCATAGAGTTTGTCACGTaGCTGGGAGGGGCCCTCTGT | + |
Preference number: 2 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVIEFVT*LGGALC Trigger: ACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | AGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTGAGAGGCCAAAGGAGTaGCTGAGGCTACTACCTGGT | + |
Preference number: 2 (lower is better) Translates to: RKYKNRVQLEAPPGQPVCERPKE*LRLLPG Trigger: ACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTC...ACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTGGTTTGGCACCTCTCTaGCTCAGGTGCTCTTCAAGC | + |
Preference number: 2 (lower is better) Translates to: RKYKNRVQLEAPPGQPVCGLAPL*LRCSSS Trigger: GCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACC...ACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCCCTGAGGCTACTACCTaGTTTGGCACCTCTCTGGCT | + |
Preference number: 2 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVPEATT*FGTSLA Trigger: AGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGG...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGAGCACCTGGTCCCTCTaGTTTCTTCAGTCCGCTCTT | + |
Preference number: 2 (lower is better) Translates to: KHSLIKYVLWKGARASVPSTWSL*FLQSAL Trigger: AAGAGCGGACTGAAGAAACCAGAGGGACCAGGTGCT...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACAGCTGGGCCCTGGAGTaGGACAGCCCCTATCTGCGG | + |
Preference number: 2 (lower is better) Translates to: LTGGWMSITDHSIFVLCHSWALE*DSPYLR Trigger: CCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCT...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAAGGTGCTCTTCAAGCTaGGCCCTGGAGTGGGACAGC | + |
Preference number: 2 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSRCSSS*ALEWDS Trigger: GCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCT...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR GCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTATGGCTTTTCTTGGCTaGTCAGTAGTCCCCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: KESIKTVCSWKPRQDSQSMAFLG*SVVPWV Trigger: CACCCAGGGGACTACTGAGCAGCCAAGAAAAGCCAT...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTAGCACCTGGTCCCTCTaGTTTCTTCAGTCCGCTCTT | + |
Preference number: 2 (lower is better) Translates to: KESIKTVCSWKPRQDSQSSTWSL*FLQSAL Trigger: AAGAGCGGACTGAAGAAACCAGAGGGACCAGGTGCT...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACGGGCTTGGGCAGGGCTaGGGAGGTGGATTGCAGTCT | + |
Preference number: 2 (lower is better) Translates to: LTGGWMSITDHSIFVLCHGLGQG*GGGLQS Trigger: AGACTGCAATCCACCTCCCCAGCCCTGCCCAAGCCC...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR CCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAAAAACCGTGTGCAGTTaGAAGCCCCGCCAGGACAGC | + |
Preference number: 2 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSKTVCS*KPRQDS Trigger: GCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTT...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR GCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACCCTCTCTGGCTCAGGTaGTCTTCAAGCTGGGCCCTG | + |
Preference number: 2 (lower is better) Translates to: LTGGWMSITDHSIFVLCHPLWLR*SSSWAL Trigger: CAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGG...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR CCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAGGCTACTACCTGGTTTaGCACCTCTCTGGCTCAGGT | + |
Preference number: 2 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSGYYLV*HLSGSG Trigger: ACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCC...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACCCTGGGTGGGGGTCTTaGCAGAGAGGCCAAAGGAGT | + |
Preference number: 2 (lower is better) Translates to: LTGGWMSITDHSIFVLCHPGWGS*QRGQRS Trigger: ACTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGG...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR GCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCACACTGTGTTTGCAATaGATGGCTTTTCTTGGCTGC | + |
Preference number: 2 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVTLCLQ*MAFLGC Trigger: GCAGCCAAGAAAAGCCATGCATTGCAAACACAGTGT...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR GCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGGGCCACACTGTGTTTaGAATGCATGGCTTTTCTTG | + |
Preference number: 2 (lower is better) Translates to: KESIKTVCSWKPRQDSQSGPHCV*NAWLFL Trigger: CAAGAAAAGCCATGCATTGCAAACACAGTGTGGCCC...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR CCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACGCAGGGCTGGGGAGGTaGATTGCAGTCTATGCTGAG | + |
Preference number: 2 (lower is better) Translates to: LTGGWMSITDHSIFVLCHAGLGR*IAVYAE Trigger: CTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGC...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAATTAAGTATGTGCTTTaGAAGGGCGCCCGCGCCTCT | + |
Preference number: 2 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSIKYVL*KGARAS Trigger: AGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAAT...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
3UTR-3UTR GCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAGGGCCACACTGTGTTTaGAATGCATGGCTTTTCTTG | + |
Preference number: 2 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSGPHCV*NAWLFL Trigger: CAAGAAAAGCCATGCATTGCAAACACAGTGTGGCCC...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 72 bp | GGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTaGGCCATTGCAGCCCCACAGTGCACCCCCTTCCAC | + |
Preference number: 3 (lower is better) Translates to: GRPRLCAAANSS*AIAAPQCTPFH Trigger: GTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 72 bp | GCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTaGACCCCCTTCCACTGGGCTTGGGCAGGGCTGGGG | + |
Preference number: 3 (lower is better) Translates to: AANSSWAIAAPQ*TPFHWAWAGLG Trigger: CCCCAGCCCTGCCCAAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 72 bp | GCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTaGAGCCCCACAGTGCACCCCCTTCCACTGGGCTTG | + |
Preference number: 3 (lower is better) Translates to: APLCRSQLQLGH*SPTVHPLPLGL Trigger: CAAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGCCCTGGGTGGGGGTCTaGGCAGAGAGGCCAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: VCALEGRPRLCAAANSSWPWVGV*AERPKE Trigger: CTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGGG...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 72 bp | TTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTaGCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCC | + |
Preference number: 3 (lower is better) Translates to: LSMCFGRAPAPL*RSQLQLGHCSP Trigger: GGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 72 bp | GGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTaGGCCCTGGAGTGGGACAGCCCCTATCTGCGGGTC | + |
Preference number: 3 (lower is better) Translates to: GLAPLWLRCSSS*ALEWDSPYLRV Trigger: GACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGGGCCCTCTGTCACCTaGCTCGTCCTCTTTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: VCALEGRPRLCAAANSSWGPSVT*LVLFLF Trigger: AAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCCC...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 72 bp | AGGCTACTACCTGGTTTGGCACCTCTCTGGCTCAGGTaGTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCCC | + |
Preference number: 3 (lower is better) Translates to: RLLPGLAPLWLR*SSSWALEWDSP Trigger: GGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 72 bp | CTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTaGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTC | + |
Preference number: 3 (lower is better) Translates to: LWLRCSSSWALE*DSPYLRVNLGL Trigger: GAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 72 bp | CACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTaGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTG | + |
Preference number: 3 (lower is better) Translates to: HLSGSGALQAGP*SGTAPICGSTL Trigger: CAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR TCA 72 bp | GGGTGGGGGTCTTGGCAGAGAGGCCAAAGGAGTGCCTaGGGCTACTACCTGGTTTGGCACCTCTCTGGCTCA | + |
Preference number: 3 (lower is better) Translates to: GWGSWQRGQRSA*GYYLVWHLSGS Trigger: TGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTCTGCCAAGACCCCCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | GGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTGGGCCCTCTGTCACCTaGCTCGTCCTCTTTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: GVGQPLSAGQPWSQHLVPGPSVT*LVLFLF Trigger: AAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCCC...AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCCCCTGGGTGGGGGTCTaGGCAGAGAGGCCAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVPWVGV*AERPKE Trigger: CTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGGG...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR TCA 72 bp | TTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTaGGTTCCATCCGCGGGCCACACTGTGTTTGCAATG | + |
Preference number: 3 (lower is better) Translates to: LGRAGEVDCSLC*VPSAGHTVFAM Trigger: CATTGCAAACACAGTGTGGCCCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CCA 72 bp | GGCAGAGAGGCCAAAGGAGTGCCTGAGGCTACTACCTaGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAG | + |
Preference number: 3 (lower is better) Translates to: GREAKGVPEATT*FGTSLAQVLFK Trigger: CTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGAGGCTACTACCTGGTTaGGCACCTCTCTGGCTCAGG | + |
Preference number: 3 (lower is better) Translates to: KHSLIKYVLWKGARASVPRLLPG*APLWLR Trigger: CCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCT...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACCCTGGGTGGGGGTCTaGGCAGAGAGGCCAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSPWVGV*AERPKE Trigger: CTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGGG...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR GCA 72 bp | CTAGTTATGCTAAGCCTCATCATAGAGTTTGTCACGTaGCTGGGAGGGGCCCTCTGTCACCTTGCTCGTCCT | + |
Preference number: 3 (lower is better) Translates to: LVMLSLIIEFVT*LGGALCHLARP Trigger: AGGACGAGCAAGGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTATGATGAGGCTTAGCATAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCGGGCCCTCTGTCACCTaGCTCGTCCTCTTTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVGPSVT*LVLFLF Trigger: AAAGAGAAAGAGGACGAGCAAGGTGACAGAGGGCCC...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | ATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAACATTGGCTGGGGAGGTGGATaGCAGTCTATGCTGAGTTCC | + |
Preference number: 3 (lower is better) Translates to: IKTVCSWKPRQDSQSVNIGWGGG*QSMLSS Trigger: GGAACTCAGCATAGACTGCAATCCACCTCCCCAGCC...AATGTTTACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAAGGCTACTACCTGGTTaGGCACCTCTCTGGCTCAGG | + |
Preference number: 3 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSRLLPG*APLWLR Trigger: CCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCT...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR-3UTR CAA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAGGCTGGGGAGGTGGATaGCAGTCTATGCTGAGTTCC | + |
Preference number: 3 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSGWGGG*QSMLSS Trigger: GGAACTCAGCATAGACTGCAATCCACCTCCCCAGCC...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 72 bp | CGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATaGCAGCCCCACAGTGCACCCCCTTCCACTGGGCTT | + |
Preference number: 4 (lower is better) Translates to: RASVPQPTPAGP*QPHSAPPSTGL Trigger: AAGCCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGCGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR TCA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCGAGCTCCAGCCGCTCTaGCTCCCTCTGCAGAAACTC | + |
Preference number: 4 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPELQPL*LPLQKL Trigger: GAGTTTCTGCAGAGGGAGTCAGAGCGGCTGGAGCTC...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR TCA 90 bp | TGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCAGAGCCTGCGGTCACTaGAGGGTCTGGGATCTGCCC | + |
Preference number: 4 (lower is better) Translates to: WHLSGSGALQAGPWSGTARACGH*RVWDLP Trigger: GGGCAGATCCCAGACCCTTCAGTGACCGCAGGCTCT...GGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | CCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTGCTCCAGCAGTGGGTTaGCTTCGGACTCGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: PWSGTAPICGSTLVSAPGAPAVG*LRTRAS Trigger: GGACGCCCGAGTCCGAAGGCAACCCACTGCTGGAGC...ACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR TCA 90 bp | GGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTAGAGCCTGCGGTCACTaGAGGGTCTGGGATCTGCCC | + |
Preference number: 4 (lower is better) Translates to: GVGQPLSAGQPWSQHLVPRACGH*RVWDLP Trigger: GGGCAGATCCCAGACCCTTCAGTGACCGCAGGCTCT...AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCACTTCTTGTCCAGCTaGTCCAGCAGTGGGTTGCCT | + |
Preference number: 4 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPHFLSS*SSSGLP Trigger: AGGCAACCCACTGCTGGAGCAGCTGGACAAGAAGTG...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCATCAGGATAAGCTGTTaGCGCTCCAGCTTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPIRISC*RSSFSS Trigger: GGAGCTGAAGCTGGAGCGGCAACAGCTTATCCTGAT...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GTCTCAGCACCTGGTCCCTCTGGTTTCTTCAGTCCGCTCTTGCTCTTGCGCGGCTATCTGTGCGCACGATaGAGGTGGGGCGGTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: VSAPGPSGFFSPLLLLRGYLCAR*RWGGGG Trigger: ACCGCCACCGCCCCACCTGCATCGTGCGCACAGATA...GCCGCGCAAGAGCAAGAGCGGACTGAAGAAACCAGAGGGACCAGGTGCTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGTCACTCTTCACGGGTTaGGGCCTCTTGCCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: VCALEGRPRLCAAANSSWSLFTG*GLLPSF Trigger: GAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGA...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | CAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGATCAGGATAAGCTGTTaGCGCTCCAGCTTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: QPTPAGPLQPHSAPPSTGIRISC*RSSFSS Trigger: GGAGCTGAAGCTGGAGCGGCAACAGCTTATCCTGAT...CCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | CAAGCTGGGCCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAATGCAGGTGGGGCGGTaGCGGTTGAGCATCAGGATA | + |
Preference number: 4 (lower is better) Translates to: QAGPWSGTAPICGSTLVSMQVGR*RLSIRI Trigger: TATCCTGATGCTCAACCGCCACCGCCCCACCTGCAT...TGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
CDS-3UTR GCA 90 bp | AGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTCTGGTTTCTTTATCTGTGCGCACGATaGAGGTGGGGCGGTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: SPYLRVNLGLSTWSLWFLYLCAR*RWGGGG Trigger: ACCGCCACCGCCCCACCTGCATCGTGCGCACAGATA...AAGAAACCAGAGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
CDS-3UTR CCA 90 bp | GGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTTCACTCTTCACGGGTTaGGGCCTCTTGCCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: GVGQPLSAGQPWSQHLVPSLFTG*GLLPSF Trigger: GAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGA...AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | GTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGCAGCCAACTCCAGCTGGTCTTGTTCCGGCATCTaGCTGCAGCGACTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: VCALEGRPRLCAAANSSWSCSGI*LQRLCS Trigger: AGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGA...CCAGCTGGAGTTGGCTGCGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 72 bp | CCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTaGGTCTCAGCACCTGGTCCCTCTGGTTTCTTCAGT | + |
Preference number: 4 (lower is better) Translates to: PWSGTAPICGST*VSAPGPSGFFS Trigger: ACTGAAGAAACCAGAGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | ATAGAGTTTGTCACGTGCCTGGGAGGGGCCCTCTGTCACCTTGCTCGTCCTCTTCGGGTTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: IEFVTCLGGALCHLARPLRVGAS*PVSPPG Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCG...AAGAGGACGAGCAAGGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
||
CDS-3UTR GCA 90 bp | TGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCGTTCCGGCATCTGGCTaGAGCGACTTTGTTCTTTTC | + |
Preference number: 4 (lower is better) Translates to: WHLSGSGALQAGPWSGTAVPASG*SDFVLF Trigger: GAAAAGAACAAAGTCGCTGCAGCCAGATGCCGGAAC...GGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | CAAGCTGGGCCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAATCAGGATAAGCTGTTaGCGCTCCAGCTTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: QAGPWSGTAPICGSTLVSIRISC*RSSFSS Trigger: GGAGCTGAAGCTGGAGCGGCAACAGCTTATCCTGAT...TGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGGCCCAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACCCGCCTGGTATCTGTGCGCACGATaGAGGTGGGGCGGTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: GLGTRKGLQGWKCTSPAWYLCAR*RWGGGG Trigger: ACCGCCACCGCCCCACCTGCATCGTGCGCACAGATA...CCAGGCGGGTGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | ACTACCTGGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAATGCAGGTGGGGCGGTaGCGGTTGAGCATCAGGATA | + |
Preference number: 4 (lower is better) Translates to: TTWFGTSLAQVLFKLGPGMQVGR*RLSIRI Trigger: TATCCTGATGCTCAACCGCCACCGCCCCACCTGCAT...TCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR TCA 90 bp | GGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACCCGCCTGGGAGCTCCAGCCGCTCTaGCTCCCTCTGCAGAAACTC | + |
Preference number: 4 (lower is better) Translates to: GLGTRKGLQGWKCTSPAWELQPL*LPLQKL Trigger: GAGTTTCTGCAGAGGGAGTCAGAGCGGCTGGAGCTC...CCAGGCGGGTGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGTTCAGCTCCTCTATCTaGGTCTTCAGCTCTGCGTTC | + |
Preference number: 4 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRFSSSI*VFSSAF Trigger: GAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAA...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGGCTCCAGCAGTGGGTTaGCTTCGGACTCGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: KHSLIKYVLWKGARASVPAPAVG*LRTRAS Trigger: GGACGCCCGAGTCCGAAGGCAACCCACTGCTGGAGC...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCGCTCCAGCAGTGGGTTaGCTTCGGACTCGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVAPAVG*LRTRAS Trigger: GGACGCCCGAGTCCGAAGGCAACCCACTGCTGGAGC...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGATTTCAGCTCCTCTGTaGTCAGAGCAGAGCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRISAPL*SEQSWE Trigger: TTCCCAGCTCTGCTCTGACCACAGAGGAGCTGAAAT...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 72 bp | GAGAGGCCAAAGGAGTGCCTGAGGCTACTACCTGGTTaGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGG | + |
Preference number: 4 (lower is better) Translates to: ERPKECLRLLPG*APLWLRCSSSW Trigger: CCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGTAGCCTCAGGCACTCCTTTGGCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 72 bp | TTTCTTGGCTGCTCAGTAGTCCCCTGGGTGGGGGTCTaGGCAGAGAGGCCAAAGGAGTGCCTGAGGCTACTA | + |
Preference number: 4 (lower is better) Translates to: FLGCSVVPWVGV*AERPKECLRLL Trigger: TAGTAGCCTCAGGCACTCCTTTGGCCTCTCTGCCAAGACCCCCACCCAGGGGACTACTGAGCAGCCAAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR TCA 90 bp | GAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAGAGCCTGCGGTCACTaGAGGGTCTGGGATCTGCCC | + |
Preference number: 4 (lower is better) Translates to: ESIKTVCSWKPRQDSQSVRACGH*RVWDLP Trigger: GGGCAGATCCCAGACCCTTCAGTGACCGCAGGCTCT...TACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGTCATCGCCCCAATGTTaGGGATGTCAGCGTATTTCA | + |
Preference number: 4 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRSSPQC*GCQRIS Trigger: TGAAATACGCTGACATCCGCAACATTGGGGCGATGA...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | TTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGATTTCAGCTCCTCTGTaGTCAGAGCAGAGCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: FGTSLAQVLFKLGPGVGQISAPL*SEQSWE Trigger: TTCCCAGCTCTGCTCTGACCACAGAGGAGCTGAAAT...CTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | GTCTCAGCACCTGGTCCCTCTGGTTTCTTCAGTCCGCTCTTGCTCTTGCGCGGCATTTCAGCTCCTCTGTaGTCAGAGCAGAGCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: VSAPGPSGFFSPLLLLRGISAPL*SEQSWE Trigger: TTCCCAGCTCTGCTCTGACCACAGAGGAGCTGAAAT...GCCGCGCAAGAGCAAGAGCGGACTGAAGAAACCAGAGGGACCAGGTGCTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | ACTACCTGGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGATCTTGTTCCGGCATCTaGCTGCAGCGACTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: TTWFGTSLAQVLFKLGPGSCSGI*LQRLCS Trigger: AGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGA...TCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCATGCAGGTGGGGCGGTaGCGGTTGAGCATCAGGATA | + |
Preference number: 4 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVMQVGR*RLSIRI Trigger: TATCCTGATGCTCAACCGCCACCGCCCCACCTGCAT...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | ATAGAGTTTGTCACGTGCCTGGGAGGGGCCCTCTGTCACCTTGCTCGTCCTCTTTCATCGCCCCAATGTTaGGGATGTCAGCGTATTTCA | + |
Preference number: 4 (lower is better) Translates to: IEFVTCLGGALCHLARPLSSPQC*GCQRIS Trigger: TGAAATACGCTGACATCCGCAACATTGGGGCGATGA...AAGAGGACGAGCAAGGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGTTCACCTCCAGGAAGTaGAAGGGCGCAATCATCGCC | + |
Preference number: 4 (lower is better) Translates to: KHSLIKYVLWKGARASVPFTSRK*KGAIIA Trigger: GGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAA...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTCACTTCTTGTCCAGCTaGTCCAGCAGTGGGTTGCCT | + |
Preference number: 4 (lower is better) Translates to: RKYKNRVQLEAPPGQPVCHFLSS*SSSGLP Trigger: AGGCAACCCACTGCTGGAGCAGCTGGACAAGAAGTG...ACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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3UTR CAA 72 bp | GTCTATGCTGAGTTCCATCCGCGGGCCACACTGTGTTaGCAATGCATGGCTTTTCTTGGCTGCTCAGTAGTC | + |
Preference number: 4 (lower is better) Translates to: VYAEFHPRATLC*QCMAFLGCSVV Trigger: GACTACTGAGCAGCCAAGAAAAGCCATGCATTGCAAACACAGTGTGGCCCGCGGATGGAACTCAGCATAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACGGGTTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSRVGAS*PVSPPG Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCG...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | ATAGAGTTTGTCACGTGCCTGGGAGGGGCCCTCTGTCACCTTGCTCGTCCTCTTTCTGCAGAAACTCTGTaGGTTCCTTCTTCTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: IEFVTCLGGALCHLARPLSAETL*VPSSCS Trigger: GGAACAAGAAGAAGGAACGCACAGAGTTTCTGCAGA...AAGAGGACGAGCAAGGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | GAAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTTCAGCTCCTCTATCTaGGTCTTCAGCTCTGCGTTC | + |
Preference number: 4 (lower is better) Translates to: ERKYKNRVQLEAPPGQPVFSSSI*VFSSAF Trigger: GAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAA...GACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACCGGGTTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LTGGWMSITDHSIFVLCHRVGAS*PVSPPG Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCG...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTTCCGGCATCTGGCTaGAGCGACTTTGTTCTTTTC | + |
Preference number: 4 (lower is better) Translates to: KESIKTVCSWKPRQDSQSVPASG*SDFVLF Trigger: GAAAAGAACAAAGTCGCTGCAGCCAGATGCCGGAAC...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | ATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAACATTTTCAGCTCCTCTATCTaGGTCTTCAGCTCTGCGTTC | + |
Preference number: 4 (lower is better) Translates to: IKTVCSWKPRQDSQSVNIFSSSI*VFSSAF Trigger: GAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAA...AATGTTTACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACACTTCTTGTCCAGCTaGTCCAGCAGTGGGTTGCCT | + |
Preference number: 4 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSHFLSS*SSSGLP Trigger: AGGCAACCCACTGCTGGAGCAGCTGGACAAGAAGTG...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | AAAGAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTTCATCGCCCCAATGTTaGGGATGTCAGCGTATTTCA | + |
Preference number: 4 (lower is better) Translates to: KESIKTVCSWKPRQDSQSSSPQC*GCQRIS Trigger: TGAAATACGCTGACATCCGCAACATTGGGGCGATGA...AGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACTTCACCTCCAGGAAGTaGAAGGGCGCAATCATCGCC | + |
Preference number: 4 (lower is better) Translates to: LTGGWMSITDHSIFVLCHFTSRK*KGAIIA Trigger: GGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAA...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR GCA 90 bp | ATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTAAACATTTCTGCAGAAACTCTGTaGGTTCCTTCTTCTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: IKTVCSWKPRQDSQSVNISAETL*VPSSCS Trigger: GGAACAAGAAGAAGGAACGCACAGAGTTTCTGCAGA...AATGTTTACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CCA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCATCTTGTTCCGGCATCTaGCTGCAGCGACTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSSCSGI*LQRLCS Trigger: AGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGA...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | GCCTCTGTGCCGCAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCTCACTCTTCACGGGTaGGGGCCTCTTGCCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: ASVPQPTPAGPLQPHSAPLTLHG*GPLAQF Trigger: AAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAG...GGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTGCGGCACAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | CAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGGTGGGGCGGTGGCGGTaGAGCATCAGGATAAGCTGT | + |
Preference number: 5 (lower is better) Translates to: QPTPAGPLQPHSAPPSTGVGRWR*SIRISC Trigger: ACAGCTTATCCTGATGCTCAACCGCCACCGCCCCAC...CCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | CAGCCAACTCCAGCTGGGCCATTGCAGCCCCACAGTGCACCCCCTTCCACTGGGCTGGCTGCAGCGACTTaGTTCTTTTCCCGGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: QPTPAGPLQPHSAPPSTGLAAAT*FFSRRL Trigger: AAGGCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAG...CCCAGTGGAAGGGGGTGCACTGTGGGGCTGCAATGGCCCAGCTGGAGTTGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | TGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCCCTCACTCTTCACGGGTaGGGGCCTCTTGCCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: WHLSGSGALQAGPWSGTALTLHG*GPLAQF Trigger: AAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAG...GGCTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | CCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCTCACTCTTCACGGGTaGGGGCCTCTTGCCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: PWSGTAPICGSTLVSAPGLTLHG*GPLAQF Trigger: AAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAG...ACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | TTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGGGACAGCTGGCTGCAGCGACTTaGTTCTTTTCCCGGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: FGTSLAQVLFKLGPGVGQLAAAT*FFSRRL Trigger: AAGGCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAG...CTGTCCCACTCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | GCTTGGGCAGGGCTGGGGAGGTGGATTGCAGTCTATGCTGAGTTCCATCCGCGGGTGCGTTCCTTCTTCTaGTTCCGGCATCTGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: AWAGLGRWIAVYAEFHPRVRSFF*FRHLAA Trigger: TGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCAC...CCGCGGATGGAACTCAGCATAGACTGCAATCCACCTCCCCAGCCCTGCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 90 bp | GCTCTTCTTCCTCGTCTAGCTCACTCTTCACGGGTTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGCGCAATCATCGCCC | + |
Preference number: 5 (lower is better) Translates to: ALLPRLAHSSRVGAS*PVSPPGSARAQSSP Trigger: GGGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAGCTAGACGAGGAAGAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | ATAGAGTTTGTCACGTGCCTGGGAGGGGCCCTCTGTCACCTTGCTCGTCCTCTTGTGGGGCGGTGGCGGTaGAGCATCAGGATAAGCTGT | + |
Preference number: 5 (lower is better) Translates to: IEFVTCLGGALCHLARPLVGRWR*SIRISC Trigger: ACAGCTTATCCTGATGCTCAACCGCCACCGCCCCAC...AAGAGGACGAGCAAGGTGACAGAGGGCCCCTCCCAGGCACGTGACAAACTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 90 bp | CTCTTCACGGGTTGGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTaGAAGGGCGCAATCATCGCCCCAATGTTGCGGATGTCAGCGTAT | + |
Preference number: 5 (lower is better) Translates to: LFTGWGLLPSFTSRK*KGAIIAPMLRMSAY Trigger: ATACGCTGACATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | GGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTCCCTATCATCGCCCCAATGTaGCGGATGTCAGCGTATTTC | + |
Preference number: 5 (lower is better) Translates to: GVGQPLSAGQPWSQHLVPIIAPM*RMSAYF Trigger: GAAATACGCTGACATCCGCAACATTGGGGCGATGAT...AGGGACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | CCCTGGAGTGGGACAGCCCCTATCTGCGGGTCAACCTTGGTCTCAGCACCTGGTATCATCGCCCCAATGTaGCGGATGTCAGCGTATTTC | + |
Preference number: 5 (lower is better) Translates to: PWSGTAPICGSTLVSAPGIIAPM*RMSAYF Trigger: GAAATACGCTGACATCCGCAACATTGGGGCGATGAT...ACCAGGTGCTGAGACCAAGGTTGACCCGCAGATAGGGGCTGTCCCACTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | ACTACCTGGTTTGGCACCTCTCTGGCTCAGGTGCTCTTCAAGCTGGGCCCTGGAGTGCGTTCCTTCTTCTaGTTCCGGCATCTGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: TTWFGTSLAQVLFKLGPGVRSFF*FRHLAA Trigger: TGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCAC...TCCAGGGCCCAGCTTGAAGAGCACCTGAGCCAGAGAGGTGCCAAACCAGGTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS TCA 90 bp | GCTCCAGCTTCAGCTCCTCTATCTGCGTCTTCAGCTCTGCGTTCATaGGCTCCAGCCGCTCTGACTCCCTCTGCAGAAACTCTGTGCGTT | + |
Preference number: 5 (lower is better) Translates to: APASAPLSASSALRS*APAALTPSAETLCV Trigger: AACGCACAGAGTTTCTGCAGAGGGAGTCAGAGCGGCTGGAGCTCATGAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAAGCTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 90 bp | AGCATCAGGATAAGCTGTTGCCGCTCCAGCTTCAGCTCCTCTATCTaGGTCTTCAGCTCTGCGTTCATGAGCTCCAGCCGCTCTGACTCC | + |
Preference number: 5 (lower is better) Translates to: SIRISCCRSSFSSSI*VFSSAFMSSSRSDS Trigger: GGAGTCAGAGCGGCTGGAGCTCATGAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAAGCTGGAGCGGCAACAGCTTATCCTGATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | AAACATTCATTGATTAAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCTGTGCCGACGGGTTGGGGCCTCTaGCCCAGTTTCACCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: KHSLIKYVLWKGARASVPTGWGL*PSFTSR Trigger: CCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGT...CGGCACAGAGGCGCGGGCGCCCTTCCAAAGCACATACTTAATCAATGAATGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 90 bp | GTTTCACCTCCAGGAAGTGCAAGGGCGCAATCATCGCCCCAATGTTaGGGATGTCAGCGTATTTCAGCTCCTCTGTGGTCAGAGCAGAGC | + |
Preference number: 5 (lower is better) Translates to: VSPPGSARAQSSPQC*GCQRISAPLWSEQS Trigger: GCTCTGCTCTGACCACAGAGGAGCTGAAATACGCTGACATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | GAAAGTATAAAAACCGTGTGCAGTTGGAAGCCCCGCCAGGACAGCCAGTCTGTACTGGCTGCAGCGACTTaGTTCTTTTCCCGGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: ESIKTVCSWKPRQDSQSVLAAAT*FFSRRL Trigger: AAGGCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAG...TACAGACTGGCTGTCCTGGCGGGGCTTCCAACTGCACACGGTTTTTATACTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 90 bp | CTGCAGAAACTCTGTGCGTTCCTTCTTCTTGTTCCGGCATCTGGCTaGAGCGACTTTGTTCTTTTCCCGGCGCCTTTTCCTTCGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: LQKLCAFLLLVPASG*SDFVLFPAPFPSLF Trigger: GAAGAGCGAAGGAAAAGGCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCACAGAGTTTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | GGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCACCCGCCTGGATCATCGCCCCAATGTaGCGGATGTCAGCGTATTTC | + |
Preference number: 5 (lower is better) Translates to: GLGTRKGLQGWKCTSPAWIIAPM*RMSAYF Trigger: GAAATACGCTGACATCCGCAACATTGGGGCGATGAT...CCAGGCGGGTGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAACGGGTTGGGGCCTCTaGCCCAGTTTCACCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSTGWGL*PSFTSR Trigger: CCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGT...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | AACGATACAGGACTGGGTACTAGGAAGGGGTTACAAGGATGGAAATGTACCTCAGTGGGGCGGTGGCGGTaGAGCATCAGGATAAGCTGT | + |
Preference number: 5 (lower is better) Translates to: NDTGLGTRKGLQGWKCTSVGRWR*SIRISC Trigger: ACAGCTTATCCTGATGCTCAACCGCCACCGCCCCAC...TGAGGTACATTTCCATCCTTGTAACCCCTTCCTAGTACCCAGTCCTGTATCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS-3UTR CAA 90 bp | TTAACTGGTGGGTGGATGTCCATAACAGACCATAGCATATTTGTACTGTGTCACGTGCGTTCCTTCTTCTaGTTCCGGCATCTGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: LTGGWMSITDHSIFVLCHVRSFF*FRHLAA Trigger: TGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCAC...GTGACACAGTACAAATATGCTATGGTCTGTTATGGACATCCACCCACCAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 72 bp | GGTTGGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTaGAAGGGCGCAATCATCGCCCCAATGTTGCGGATG | + |
Preference number: 6 (lower is better) Translates to: GWGLLPSFTSRK*KGAIIAPMLRM Trigger: CATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 72 bp | CCTCGTCTAGCTCACTCTTCACGGGTTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGCGCAA | + |
Preference number: 6 (lower is better) Translates to: PRLAHSSRVGAS*PVSPPGSARAQ Trigger: TTGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAGCTAGACGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 72 bp | TCCTCGTCTAGCTCACTCTTCACGGGTTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGCGCA | + |
Preference number: 6 (lower is better) Translates to: SSSSSLFTGWGL*PSFTSRKCKGA Trigger: TGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAGCTAGACGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 72 bp | GGTGGGGCGGTGGCGGTTGAGCATCAGGATAAGCTGTaGCCGCTCCAGCTTCAGCTCCTCTATCTGCGTCTT | + |
Preference number: 6 (lower is better) Translates to: GGAVAVEHQDKL*PLQLQLLYLRL Trigger: AAGACGCAGATAGAGGAGCTGAAGCTGGAGCGGCAACAGCTTATCCTGATGCTCAACCGCCACCGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 90 bp | CGCTCTTCTTCCTCGTCTAGCTCACTCTTCACGGGTTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGCGCAATCATCGCC | + |
Preference number: 6 (lower is better) Translates to: RSSSSSSSLFTGWGL*PSFTSRKCKGAIIA Trigger: GGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAGCTAGACGAGGAAGAAGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CCA 72 bp | CGCTCTTCTTCCTCGTCTAGCTCACTCTTCACGGGTTaGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTGC | + |
Preference number: 6 (lower is better) Translates to: RSSSSSSSLFTG*GLLPSFTSRKC Trigger: GCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAACCCGTGAAGAGTGAGCTAGACGAGGAAGAAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 90 bp | AGCCGCTCTGACTCCCTCTGCAGAAACTCTGTGCGTTCCTTCTTCTaGTTCCGGCATCTGGCTGCAGCGACTTTGTTCTTTTCCCGGCGC | + |
Preference number: 6 (lower is better) Translates to: SRSDSLCRNSVRSFF*FRHLAAATLFFSRR Trigger: GCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCACAGAGTTTCTGCAGAGGGAGTCAGAGCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 72 bp | ATAAGCTGTTGCCGCTCCAGCTTCAGCTCCTCTATCTaGGTCTTCAGCTCTGCGTTCATGAGCTCCAGCCGC | + |
Preference number: 6 (lower is better) Translates to: ISCCRSSFSSSI*VFSSAFMSSSR Trigger: GCGGCTGGAGCTCATGAACGCAGAGCTGAAGACGCAGATAGAGGAGCTGAAGCTGGAGCGGCAACAGCTTAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 72 bp | CCAGGAAGTGCAAGGGCGCAATCATCGCCCCAATGTTaGGGATGTCAGCGTATTTCAGCTCCTCTGTGGTCA | + |
Preference number: 6 (lower is better) Translates to: PGSARAQSSPQC*GCQRISAPLWS Trigger: TGACCACAGAGGAGCTGAAATACGCTGACATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 72 bp | TCCAGGAAGTGCAAGGGCGCAATCATCGCCCCAATGTaGCGGATGTCAGCGTATTTCAGCTCCTCTGTGGTC | + |
Preference number: 6 (lower is better) Translates to: SRKCKGAIIAPM*RMSAYFSSSVV Trigger: GACCACAGAGGAGCTGAAATACGCTGACATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 90 bp | AGTTTCACCTCCAGGAAGTGCAAGGGCGCAATCATCGCCCCAATGTaGCGGATGTCAGCGTATTTCAGCTCCTCTGTGGTCAGAGCAGAG | + |
Preference number: 6 (lower is better) Translates to: SFTSRKCKGAIIAPM*RMSAYFSSSVVRAE Trigger: CTCTGCTCTGACCACAGAGGAGCTGAAATACGCTGACATCCGCAACATTGGGGCGATGATTGCGCCCTTGCACTTCCTGGAGGTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS GCA 72 bp | CTCTGTGCGTTCCTTCTTCTTGTTCCGGCATCTGGCTaGAGCGACTTTGTTCTTTTCCCGGCGCCTTTTCCT | + |
Preference number: 6 (lower is better) Translates to: LCAFLLLVPASG*SDFVLFPAPFP Trigger: AGGAAAAGGCGCCGGGAAAAGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |
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CDS CAA 72 bp | GACTCCCTCTGCAGAAACTCTGTGCGTTCCTTCTTCTaGTTCCGGCATCTGGCTGCAGCGACTTTGTTCTTT | + |
Preference number: 6 (lower is better) Translates to: DSLCRNSVRSFF*FRHLAAATLFF Trigger: AAAGAACAAAGTCGCTGCAGCCAGATGCCGGAACAAGAAGAAGGAACGCACAGAGTTTCTGCAGAGGGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050687.14 ENSMUST00000171754.3 ENSMUST00000177587.9 |