RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JCAD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033960

Ensembl transcript IDs: ENSMUST00000037029.7, ENSMUST00000234153.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTaGGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGT +
Preference number: 1 (lower is better)
Translates to: GGAGTLQTPQFPASA*ARQVGQPESFPLAG
Trigger: ACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR TCA 90 bp TGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTaGGCCAAGCTTTGGACAAGGACGGCCATGAGAAACAGGTTCAAA +
Preference number: 1 (lower is better)
Translates to: CPLPQGDLQLKPLPT*AKLWTRTAMRNRFK
Trigger: TTTGAACCTGTTTCTCATGGCCGTCCTTGTCCAAAGCTTGGCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 90 bp TTGGTCTTCAATGACATTGGGAAACACAGTGAAAAGGAACAGAGCTaGCATTGGAGCAGGGACAAAGGCTTTAGAGCCAAGGTGGGCCCT +
Preference number: 1 (lower is better)
Translates to: LVFNDIGKHSEKEQS*HWSRDKGFRAKVGP
Trigger: AGGGCCCACCTTGGCTCTAAAGCCTTTGTCCCTGCTCCAATGTCAGCTCTGTTCCTTTTCACTGTGTTTCCCAATGTCATTGAAGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR GCA 90 bp AAGGACGGCCATGAGAAACAGGTTCAAATCAAGACTGTAGATGTGTaGATCTGGGAAGGTGTATCGAGACTACTTGGACTCTGCTTTGTG +
Preference number: 1 (lower is better)
Translates to: KDGHEKQVQIKTVDV*IWEGVSRLLGLCFV
Trigger: CACAAAGCAGAGTCCAAGTAGTCTCGATACACCTTCCCAGATGCACACATCTACAGTCTTGATTTGAACCTGTTTCTCATGGCCGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR CCA 90 bp CATGTATACACATGCACACAGACACTAGTATACTTTAGCCTTCACTaGCCCCTCGCAGATGATTCAACCACCATTGCAAACCACTCACCT +
Preference number: 1 (lower is better)
Translates to: HVYTCTQTLVYFSLH*PLADDSTTIANHSP
Trigger: AGGTGAGTGGTTTGCAATGGTGGTTGAATCATCTGCGAGGGGCCAGTGAAGGCTAAAGTATACTAGTGTCTGTGTGCATGTGTATACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR TCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGTTTCCAGCTTCTGCCTaGGCAAGACAGGTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKFPASA*ARQVGQ
Trigger: TTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAA...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR-3UTR GCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCACAGTTTCCAGCTTCTaGCTGAGCAAGACAGGTGGG +
Preference number: 2 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSTVSSF*LSKTGG
Trigger: CCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGT...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR TCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCTTTCCAGCTTCTGCCTaGGCAAGACAGGTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: GLTSHGLILQEFGMSENVFPASA*ARQVGQ
Trigger: TTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAA...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAATCCACTAGCAGGTGGTaGGGGCTCCACCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKSTSRW*GLHQQP
Trigger: TGGCTGCTGGTGGAGCCCCCACCACCTGCTAGTGGA...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR-3UTR GCA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCCTAGGGAAGACTGAGTaGAAAGCTGAGCGAGCACAG +
Preference number: 2 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLLGKTE*KAERAQ
Trigger: CTGTGCTCGCTCAGCTTTGCACTCAGTCTTCCCTAG...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR TCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCGGAGATAAGAGACTGTaGAAGTCCTGTTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSGDKRL*KSCLNL
Trigger: TAAGTTCAAACAGGACTTTCACAGTCTCTTATCTCC...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR CCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGCTTTCCACTAGCAGGTaGTGGGGGCTCCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMLSTSR*WGLHQQ
Trigger: CTGCTGGTGGAGCCCCCACCACCTGCTAGTGGAAAG...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR TCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCCATTGGGAAACACAGTaGAAAGGAACAGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: GLTSHGLILQEFGMSENVHWETQ*KGTELT
Trigger: TGTCAGCTCTGTTCCTTTTCACTGTGTTTCCCAATG...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR GCA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCGGCAGAAGGGTGAAATaGCACAAAATACACGAACTC +
Preference number: 2 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLGRRVK*HKIHEL
Trigger: GAGTTCGTGTATTTTGTGGCATTTCACCCTTCTGCC...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR CAA 90 bp GGGAAGTATGATGCGATCTCAAACAAGACAAAATGGAAGTGCAGCTaGTTCCAGACTGAGATACATAAGGCACAACAGCTTTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GKYDAISNKTKWKCS*FQTEIHKAQQLSFR
Trigger: CCTGAAGGAAAGCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCTTGTTTGAGATCGCATCATACTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR TCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTATGCCACCTAGGTACTaGTCCCAAGCACTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPMPPRY*SQALFR
Trigger: TCTGAAAAGTGCTTGGGATCAGTACCTAGGTGGCAT...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTGCTATAGAGACAGATaGTGTCAGCAGATCACTGCT +
Preference number: 2 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGCYRDR*CQQITA
Trigger: AGCAGTGATCTGCTGACACCATCTGTCTCTATAGCA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR-3UTR GCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTAAGACTGTAGATGTGTaGATCTGGGAAGGTGTATCG +
Preference number: 2 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPKTVDV*IWEGVS
Trigger: CGATACACCTTCCCAGATGCACACATCTACAGTCTT...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAGGGATTACATATCCATaGTATAGAGACAGATGGTGT +
Preference number: 2 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKGITYP*YRDRWC
Trigger: ACACCATCTGTCTCTATAGCATGGATATGTAATCCC...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR-3UTR GCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAGTGTCAGCAGATCACTaGTTTATCTTCGTAACAATT +
Preference number: 2 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQVSADH*FIFVTI
Trigger: AATTGTTACGAAGATAAAGCAGTGATCTGCTGACAC...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR GCA 72 bp AGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTaGCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTT +
Preference number: 3 (lower is better)
Translates to: SRDTANPTVSSF*LSKTGGPTREL
Trigger: AAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR TCA 72 bp GGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTaGGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: GTLQTPQFPASA*ARQVGQPESFP
Trigger: TGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR-3UTR CAA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTAAACCACTCACCTGTTaGTCCACTGCCCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGKPLTC*STAPGR
Trigger: TCTCCCTGGGGCAGTGGACAAACAGGTGAGTGGTTT...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR GCA 72 bp CAGTACAGCACCAGTATGTACACAGGTACACAGGCGTaGACTGGGGTCTTCACATGTATACACATGCACACA +
Preference number: 3 (lower is better)
Translates to: QYSTSMYTGTQA*TGVFTCIHMHT
Trigger: TGTGTGCATGTGTATACATGTGAAGACCCCAGTGCACGCCTGTGTACCTGTGTACATACTGGTGCTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 72 bp TCCCTACGTGAGCCAAGCTTTGGACAAGGACGGCCATaGGAAACAGGTTCAAATCAAGACTGTAGATGTGTG +
Preference number: 3 (lower is better)
Translates to: SLREPSFGQGRP*ETGSNQDCRCV
Trigger: CACACATCTACAGTCTTGATTTGAACCTGTTTCTCATGGCCGTCCTTGTCCAAAGCTTGGCTCACGTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR-3UTR CAA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCTACTTGGACTCTGCTTaGTGTAGTCCAGTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLYLDSA*CSPVSA
Trigger: TGCACTGACTGGACTACACAAAGCAGAGTCCAAGTA...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR CCA 72 bp ACATGCACACAGACACTAGTATACTTTAGCCTTCACTaGCCCCTCGCAGATGATTCAACCACCATTGCAAAC +
Preference number: 3 (lower is better)
Translates to: TCTQTLVYFSLH*PLADDSTTIAN
Trigger: GTTTGCAATGGTGGTTGAATCATCTGCGAGGGGCCAGTGAAGGCTAAAGTATACTAGTGTCTGTGTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 72 bp AATGACATTGGGAAACACAGTGAAAAGGAACAGAGCTaGCATTGGAGCAGGGACAAAGGCTTTAGAGCCAAG +
Preference number: 3 (lower is better)
Translates to: NDIGKHSEKEQS*HWSRDKGFRAK
Trigger: CTTGGCTCTAAAGCCTTTGTCCCTGCTCCAATGTCAGCTCTGTTCCTTTTCACTGTGTTTCCCAATGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR GCA 72 bp CATGAGAAACAGGTTCAAATCAAGACTGTAGATGTGTaGATCTGGGAAGGTGTATCGAGACTACTTGGACTC +
Preference number: 3 (lower is better)
Translates to: HEKQVQIKTVDV*IWEGVSRLLGL
Trigger: GAGTCCAAGTAGTCTCGATACACCTTCCCAGATGCACACATCTACAGTCTTGATTTGAACCTGTTTCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR CCA 72 bp AAACAGGTTCAAATCAAGACTGTAGATGTGTGCATCTaGGAAGGTGTATCGAGACTACTTGGACTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: KQVQIKTVDVCI*EGVSRLLGLCF
Trigger: AAAGCAGAGTCCAAGTAGTCTCGATACACCTTCCCAGATGCACACATCTACAGTCTTGATTTGAACCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 72 bp CTCCTAGGCCACACTCCTAACCACCTGGAAGGGAATTaGTGTAAATACTCTGTTCTAAATATAGGGATTACA +
Preference number: 3 (lower is better)
Translates to: LLGHTPNHLEGN*CKYSVLNIGIT
Trigger: TGTAATCCCTATATTTAGAACAGAGTATTTACATCAATTCCCTTCCAGGTGGTTAGGAGTGTGGCCTAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR TCA 72 bp CATGGTATGTGTGCACATAGAATGCCACCTAGGTACTaGTCCCAAGCACTTTTCAGAATATGCAAGATTAAC +
Preference number: 3 (lower is better)
Translates to: HGMCAHRMPPRY*SQALFRICKIN
Trigger: GTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGTACCTAGGTGGCATTCTATGTGCACACATACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 72 bp ATATTAGTTAACAAAAACCTTTCACAGGCAGAAGGGTaGAATGCCACAAAATACACGAACTCTGCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: ILVNKNLSQAEG*NATKYTNSAGQ
Trigger: TTGGCCTGCAGAGTTCGTGTATTTTGTGGCATTTCACCCTTCTGCCTGTGAAAGGTTTTTGTTAACTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR TCA 72 bp CAAAGACAACCACCTCACTATCATGTCTTTAAGTTCTaGAACAACCACAGGCACAATTCCTCCTATACTTTT +
Preference number: 3 (lower is better)
Translates to: QRQPPHYHVFKF*NNHRHNSSYTF
Trigger: AAAAGTATAGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTGGTTGTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
3UTR GCA 72 bp AAATACTCTGTTCTAAATATAGGGATTACATATCCATaGTATAGAGACAGATGGTGTCAGCAGATCACTGCT +
Preference number: 3 (lower is better)
Translates to: KYSVLNIGITYP*YRDRWCQQITA
Trigger: AGCAGTGATCTGCTGACACCATCTGTCTCTATAGCATGGATATGTAATCCCTATATTTAGAACAGAGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR CCA 72 bp TTAATCTATAATAGTCACTATGTGACTGACCAGCTGTaGGGAAGTATGATGCGATCTCAAACAAGACAAAAT +
Preference number: 3 (lower is better)
Translates to: LIYNSHYVTDQL*GSMMRSQTRQN
Trigger: ATTTTGTCTTGTTTGAGATCGCATCATACTTCCCCACAGCTGGTCAGTCACATAGTGACTATTATAGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGAGGGGGAGCTGGCCCTaGAGCCACCGGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPERGSWP*SHRGLE
Trigger: TTCCAGTCCCCGGTGGCTGCAGGGCCAGCTCCCCCT...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTCTCCAGCGCCAGCCCTaGAGGCTGCTGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASLQRQP*RLLCCS
Trigger: AGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAG...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGCTGCTCCTGCAGGGCTaGACCCTGGCACAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKLLLQG*TLAQPS
Trigger: CGAGGGCTGTGCCAGGGTTCAGCCCTGCAGGAGCAG...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCCCCTTCACCACCTCTaGCTTGGGAACAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDPLHHL*LGNRVG
Trigger: GCCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGGG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGCCAGCCCTGCAGGCTaGTGTGCTGTTCTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWASPAG*CAVLVP
Trigger: GGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGAGACAGAGGGCAGGTaGCCTGCTTGCCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRETEGR*PACQAS
Trigger: CGAAGCCTGGCAAGCAGGGCACCTGCCCTCTGTCTC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTCTTTGGTGCTCCCTGTaGCCTCTTGGCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASLWCSL*PLGLLM
Trigger: CATCAGCAGGCCAAGAGGCCACAGGGAGCACCAAAG...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCACCGGGGACTGGAATaGACAAAGGCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDHRGLE*TKAELC
Trigger: GCAGAGCTCTGCCTTTGTCCATTCCAGTCCCCGGTG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACTCACCACCTCTGGCTTaGGAACAGGGTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDSPPLA*EQGWHQ
Trigger: CTGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGA...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTTGTTCTCCTGGCACTTaGCAGAAGGGACTCCACGGC +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASCSPGT*QKGLHG
Trigger: GCCGTGGAGTCCCTTCTGCCAAGTGCCAGGAGAACA...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCCTGGGAAAAGGGCCTaGGGAGCTAGCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWPGKRA*GASLLK
Trigger: CTTGAGAAGGCTAGCTCCTCAGGCCCTTTTCCCAGG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCAGAGCTCTGCTCATTaGCTGGTGAAGGCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWQSSAH*LVKALG
Trigger: GCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGGGCAGGGAGGAGCTGTaGGCTTTTGGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEGREEL*AFGVFM
Trigger: CATGAAGACTCCAAAAGCTCACAGCTCCTCCCTGCC...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGAGGGATGTCCTACTGTaGGTATGGGCTGTAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWRDVLL*VWAVAP
Trigger: TGGCGCTACAGCCCATACGCACAGTAGGACATCCCT...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCTCCCCATCGGATGCCTaGCTCCCTAACTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFSPSDA*LPNSLG
Trigger: GCCAAGGGAGTTAGGGAGGCAGGCATCCGATGGGGA...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGGGAGCTGGCCCTaGAGCCACCGGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRRGSWP*SHRGLE
Trigger: TTCCAGTCCCCGGTGGCTGCAGGGCCAGCTCCCCCT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCCAGCCCTGCAGGCTaGTGTGCTGTTCTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRASPAG*CAVLVP
Trigger: GGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCATGCCCAGGGGGAGCTaGCCCTGCAGCCACCGGGGA +
Preference number: 4 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLMPRGS*PCSHRG
Trigger: TCCCCGGTGGCTGCAGGGCCAGCTCCCCCTGGGCAT...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGGTCCTGGCCAAGGGCTaGAAGCCTGAAGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEVLAKG*KPEVLW
Trigger: CCAAAGAACTTCAGGCTTCCAGCCCTTGGCCAGGAC...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTTCTGTATTGGTGTCCTaGCCAAGGGCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASSVLVS*PRAGSL
Trigger: CAGGCTTCCAGCCCTTGGCCAGGACACCAATACAGA...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGTCTGTATTGGTGTCCTaGCCAAGGGCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWSVLVS*PRAGSL
Trigger: CAGGCTTCCAGCCCTTGGCCAGGACACCAATACAGA...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGATTGCTGGCCTCTCCTaGCTTTGTGGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWIAGLS*LCGREE
Trigger: CTCCTCCCTGCCACAAAGCCAGGAGAGGCCAGCAAT...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGTCGGAGCTACATTGCTaGCCTCTCCTGGCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWSELHC*PLLALW
Trigger: CCACAAAGCCAGGAGAGGCCAGCAATGTAGCTCCGA...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGGAAGCCATCCACATCTaGGCATATAGAAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEEAIHI*AYRSLG
Trigger: CCCCAGGCTTCTATATGCTCAGATGTGGATGGCTTC...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCTAGAAGTGCTTTGGTaGTCCCTGTGGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWLEVLW*SLWPLG
Trigger: GCCAAGAGGCCACAGGGAGCACCAAAGCACTTCTAG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTGACTCTGGTTGCTaGTCACATGCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRADSGC*SHAWAQ
Trigger: CTGTGCCCAGGCATGTGAGCAGCAACCAGAGTCAGC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGTGTGGAGGAAGACCTTaGGGAGGAGAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWCGGRP*GGEPGI
Trigger: AATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACA...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCCCTGCAGGCTGCTGTaGTGTTCTAGTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFPCRLL*CSSSLE
Trigger: CTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGG...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTCTCTGCCCTTTCCTaGAGAGACTCACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLSALS*RDSLGR
Trigger: CCTTCCAAGTGAGTCTCTGCAGGAAAGGGCAGAGAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCGCCCAGGATCCTCTCTaGCCTTTCCTGCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSAQDPL*PFLQRL
Trigger: GAGTCTCTGCAGGAAAGGGCAGAGAGGATCCTGGGC...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCAGCTCCAGGTCAGTaGAAGACATACTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWAAPGQ*KTYSAD
Trigger: GTCTGCTGAGTATGTCTTCCACTGACCTGGAGCTGC...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGGAGAGCCCAGGACTTaGTTCTGGAATCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASGEPRT*FWNLHS
Trigger: ACTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCC...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCTGTTCTAGTTCCCTaGAGAGCCCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASAVLVP*RAQDLV
Trigger: AACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGC...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTTCCATCTGCCCATTaGACTGGAACACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLPSAH*TGTPLL
Trigger: CAGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATTCTCCCCTGGGCTGTaGGTGAGAGCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRFSPGL*VRAITR
Trigger: CCGTGTTATAGCTCTCACTCACAGCCCAGGGGAGAA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGGCAGGGAGGAGCTGTaGGCTTTTGGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRGREEL*AFGVFM
Trigger: CATGAAGACTCCAAAAGCTCACAGCTCCTCCCTGCC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCTTCCCATGAGGGCTTaGAGCTCCAGGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFLPMRA*SSRSVE
Trigger: TTCCACTGACCTGGAGCTGCAAGCCCTCATGGGAAG...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGGACTCCCTCAGACCTTaGCTTGGAGATGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEDSLRP*LGDVLL
Trigger: GAGAAGAACATCTCCAAGGCAAGGTCTGAGGGAGTC...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGTCCTCTGGCTGTTCTaGCTCACTGTCCTCACTACC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFVLWLF*LTVLTT
Trigger: GGTAGTGAGGACAGTGAGGCAGAACAGCCAGAGGAC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTTGGTTCTGGAATCTaGACAGTCCTCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLGSGI*TVLWLF
Trigger: GAACAGCCAGAGGACTGTGCAGATTCCAGAACCAAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCTCTCTGCCCTTTCCTaGAGAGACTCACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWLSALS*RDSLGR
Trigger: CCTTCCAAGTGAGTCTCTGCAGGAAAGGGCAGAGAG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATGGGTTGCAGGCACTTaGATCAGGCTCAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRWVAGT*IRLRKL
Trigger: CAGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGATCCTTACTTCTTGTTaGGTAGGAGCCACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEILTSC*VGATWV
Trigger: GACCCACGTGGCTCCTACCCAACAAGAAGTAAGGAT...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGAGAGCCAGAAGGAAGTaGACAGCTGGTCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPERARRK*TAGLRF
Trigger: AAACCTGAGACCAGCTGTCCACTTCCTTCTGGCTCT...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGTGCTCTGTTTGGCCATaGAAGCCTCCAGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWCSVWP*KPPGPM
Trigger: CATTGGACCTGGAGGCTTCCATGGCCAAACAGAGCA...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACTGTGGTGAAGAGGCATaGCCTTCTGCCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDCGEEA*PSALMS
Trigger: AGACATCAAGGCAGAAGGCCATGCCTCTTCACCACA...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGATTGCTGGCCTCTCCTaGCTTTGTGGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKIAGLS*LCGREE
Trigger: CTCCTCCCTGCCACAAAGCCAGGAGAGGCCAGCAAT...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATCGGAGCTACATTGCTaGCCTCTCCTGGCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRSELHC*PLLALW
Trigger: CCACAAAGCCAGGAGAGGCCAGCAATGTAGCTCCGA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAGCTTGGGAACAGGGTTaGCACCAGGGAGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTAWEQG*HQGAGQ
Trigger: CTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGC...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCCATTACCCACCTGTGTaGGAGTCTCTCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSHYPPV*ESLCPA
Trigger: AGCTGGGCAGAGAGACTCCCACACAGGTGGGTAATG...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTGCAGAGACTCACTTaGAAGGACTTCCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLQRLT*KDFHGV
Trigger: AACACCGTGGAAGTCCTTCCAAGTGAGTCTCTGCAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCCTCTCCACTCGGCTTaGATCATAGGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDPLHSA*IIGICT
Trigger: TGTGCAGATTCCTATGATCCAAGCCGAGTGGAGAGG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCCTCTCCACTCGGCTTaGATCATAGGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEPLHSA*IIGICT
Trigger: TGTGCAGATTCCTATGATCCAAGCCGAGTGGAGAGG...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGGGACACCTGTTATGTaGCCATCATGTAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWGTPVM*PSCSGT
Trigger: TGTTCCACTACATGATGGTCACATAACAGGTGTCCC...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACACCTGGGAAAAGGGCCTaGGGAGCTAGCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTPGKRA*GASLLK
Trigger: CTTGAGAAGGCTAGCTCCTCAGGCCCTTTTCCCAGG...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACACAGAGCTCTGCTCATTaGCTGGTGAAGGCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTQSSAH*LVKALG
Trigger: GCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTG...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCAATCCGCCCATGACATaGTGCTCTGTTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFNPPMT*CSVWPW
Trigger: CCATGGCCAAACAGAGCATCATGTCATGGGCGGATT...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCTGGTTTGGGTCTGTTaGTCTCTGTATTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPELVWVC*SLYWCP
Trigger: AGGACACCAATACAGAGATCAACAGACCCAAACCAG...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGCTGGTTTGGGTCTGTTaGTCTCTGTATTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWLVWVC*SLYWCP
Trigger: AGGACACCAATACAGAGATCAACAGACCCAAACCAG...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCTTTGGAAGGGTTTCTaGGCCTCTTTTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWLWKGF*ASFQDP
Trigger: TGGGTCCTGAAAAGAGGCTCAGAAACCCTTCCAAAG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTGTCCTTGTCGACCTaGATCTCTCTGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLSLST*ISLICP
Trigger: AGGACAAATCAGAGAGATGCAGGTCGACAAGGACAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCTCCTCCTGGCTTTTCTaGTCTGCAGTCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSSSWLF*SAVRLP
Trigger: TGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAGGA...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGTTCTAGAAGTGCTTTaGTGCTCCCTGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWVLEVL*CSLWPL
Trigger: AAGAGGCCACAGGGAGCACCAAAGCACTTCTAGAAC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCTCCCCATGAACAAATaGGTACAGACCCTCGAACTT +
Preference number: 4 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDLPMNK*VQTLEL
Trigger: AAGTTCGAGGGTCTGTACCCATTTGTTCATGGGGAG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAATGCCCAGGGGGAGCTaGCCCTGCAGCCACCGGGGA +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKMPRGS*PCSHRG
Trigger: TCCCCGGTGGCTGCAGGGCCAGCTCCCCCTGGGCAT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGACCCAGGACTTGGTTCTaGAATCTGCACAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRPRTWF*NLHSPL
Trigger: CAGAGGACTGTGCAGATTCCAGAACCAAGTCCTGGG...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGGATGGACACTTGAGTaGCCAGGCTTTGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWGWTLE*PGFGSS
Trigger: TGAAGAACCAAAGCCTGGCCACTCAAGTGTCCATCC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCATCTGCCCATTGGACTaGAACACCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFICPLD*NTSAAF
Trigger: GAAGGCAGCAGAGGTGTTCCAGTCCAATGGGCAGAT...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCCATTCAAATCCTCCTaGCTTTTCTGCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEPFKSS*LFCSAV
Trigger: GACTGCAGAGCAGAAAAGCCAGGAGGATTTGAATGG...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTTTTGTTCTGTTCTCCTaGCACTTGGCAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASFVLFS*HLAEGT
Trigger: AGTCCCTTCTGCCAAGTGCCAGGAGAACAGAACAAA...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTTCTGAGACAAGGAGTTaGCCTCCCTCATTCTTATCA +
Preference number: 4 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASSETRS*PPSFLS
Trigger: TGATAAGAATGAGGGAGGTCAACTCCTTGTCTCAGA...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCGCTGACTCTGGTTGCTaGTCACATGCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVADSGC*SHAWAQ
Trigger: CTGTGCCCAGGCATGTGAGCAGCAACCAGAGTCAGC...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGACTCCCTCAGACCTTaGCTTGGAGATGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFDSLRP*LGDVLL
Trigger: GAGAAGAACATCTCCAAGGCAAGGTCTGAGGGAGTC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCCTGGAACACCTCTGCTaGCTTCCTCCTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVLEHLC*LPPVMG
Trigger: GCCCATCACAGGAGGAAGGCAGCAGAGGTGTTCCAG...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGACTGGAACACCTCTGCTaGCTTCCTCCTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRLEHLC*LPPVMG
Trigger: GCCCATCACAGGAGGAAGGCAGCAGAGGTGTTCCAG...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAGGACTGGAACACCTCTaGTGCCTTCCTCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTGLEHL*CLPPVM
Trigger: CATCACAGGAGGAAGGCAGCAGAGGTGTTCCAGTCC...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGTTTTGTGTCAATGGGTaGAATCCTGCTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWFCVNG*NPAHRP
Trigger: AGGCCTGTGAGCAGGATTGCACCCATTGACACAAAA...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAGCCCAGGATCCTCTCTaGCCTTTCCTGCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRAQDPL*PFLQRL
Trigger: GAGTCTCTGCAGGAAAGGGCAGAGAGGATCCTGGGC...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATGGATGAACTTGGGTTaGAGGCACTTGCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRWMNLG*RHLHQA
Trigger: AGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGAGGGCAGGTGCCCTaGTTGCCAGGCTTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRRGQVP*LPGFVF
Trigger: AAAGACGAAGCCTGGCAAGCAGGGCACCTGCCCTCT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGATATGGTGGCACTTTTaGGACACCTGTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPEIWWHF*DTCYVT
Trigger: GGTCACATAACAGGTGTCCCAAAAGTGCCACCATAT...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTGCAGCCACCGGGGACTaGAATGGACAAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGAATGD*NGQRQS
Trigger: GCTCTGCCTTTGTCCATTCCAGTCCCCGGTGGCTGC...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCTGTGGTGAAGAGGCATaGCCTTCTGCCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFCGEEA*PSALMS
Trigger: AGACATCAAGGCAGAAGGCCATGCCTCTTCACCACA...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGGCAGCTCCAGGTCAGTaGAAGACATACTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKAAPGQ*KTYSAD
Trigger: GTCTGCTGAGTATGTCTTCCACTGACCTGGAGCTGC...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGACCTCAGACCTTGCCTTaGAGATGTTCTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRPQTLP*RCSSPS
Trigger: GCTTGGAGAAGAACATCTCCAAGGCAAGGTCTGAGG...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCTGGGGTCATCAATTTaGCCATCTTCTGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFLGSSI*PSSDSL
Trigger: GAGGGAGTCAGAAGATGGCCAAATTGATGACCCCAG...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGTTGGGTTTGATGAGATaGAGGATTCTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPELGLMR*RILGSS
Trigger: TGATGACCCCAGAATCCTCCATCTCATCAAACCCAA...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGGGAGAGCCCAGGACTTaGTTCTGGAATCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKGEPRT*FWNLHS
Trigger: ACTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCC...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCTGCAGAGACTCACTTaGAAGGACTTCCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFLQRLT*KDFHGV
Trigger: AACACCGTGGAAGTCCTTCCAAGTGAGTCTCTGCAG...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR CAA 72 bp CTGAGTGCAAAGCTGAGCGAGCACAGCACGTTTGCCTaGAAACCAAGTGGAGTGGGTAAGTTACAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LSAKLSEHSTFA*KPSGVGKLQRV
Trigger: CACTCGCTGTAACTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACATCAGGTACTTGCTGCTaGCTCTGGTTGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTSGTCC*LWLLLT
Trigger: TGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGA...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGAATTTGGTGAGTTCTTaGCTTCCTCTTGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWNLVSS*LPLGSD
Trigger: GTCAGAACCAAGAGGAAGTCAAGAACTCACCAAATT...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCTCCAAGCTCATGTCCTaGATTCTCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSSKLMS*ILSSSS
Trigger: GGAAGAAGAGCTGAGAATGCAGGACATGAGCTTGGA...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCTGTGGAGGAAGACCTTaGGGAGGAGAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVCGGRP*GGEPGI
Trigger: AATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACA...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCAGAGGCATGGCCTTCTaGCTTGATGTCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSRGMAF*LDVCHI
Trigger: AATGTGACAGACATCAAGGCAGAAGGCCATGCCTCT...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAAGAGGCATGGCCTTCTaGCTTGATGTCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRRGMAF*LDVCHI
Trigger: AATGTGACAGACATCAAGGCAGAAGGCCATGCCTCT...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCGGACTGGAACACCTCTaGTGCCTTCCTCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVGLEHL*CLPPVM
Trigger: CATCACAGGAGGAAGGCAGCAGAGGTGTTCCAGTCC...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGCCACGGCCACCTCTATaGCCAGGATCCTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGPRPPL*PGSSLP
Trigger: GGGCAGAGAGGATCCTGGGCATAGAGGTGGCCGTGG...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCTCCCCATGAACAAATaGGTACAGACCCTCGAACTT +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFLPMNK*VQTLEL
Trigger: AAGTTCGAGGGTCTGTACCCATTTGTTCATGGGGAG...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGAGGATCTTCAAGGTATaGGTTTGGAATGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWRIFKV*VWNVLR
Trigger: CCTCAGCACATTCCAAACCCATACCTTGAAGATCCT...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAGGGCCGCCGGCTAACTaGTTTCAAGAGAAACTGACC +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRGPPAN*FQEKLT
Trigger: GGTCAGTTTCTCTTGAAACCAGTTAGCCGGCGGCCC...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCTTTGTTCTGTTCTCCTaGCACTTGGCAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFFVLFS*HLAEGT
Trigger: AGTCCCTTCTGCCAAGTGCCAGGAGAACAGAACAAA...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGCTGGTTTGTATCCATaGGAAATCAGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFAGLYP*EIRRSS
Trigger: GGAAGATCTCCTGATTTCTCATGGATACAAACCAGC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAGGGGCTGAGCTAGTTTaGTATGTCGGATCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRGAELV*YVGSVD
Trigger: ATCCACGGATCCGACATATCAAACTAGCTCAGCCCC...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAAATTTGGCCATCTTCTaGCTCCCTCAGACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTNLAIF*LPQTLP
Trigger: AGGCAAGGTCTGAGGGAGTCAGAAGATGGCCAAATT...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAACTCCAGCGCCAGCCCTaGAGGCTGCTGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKLQRQP*RLLCCS
Trigger: AGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAG...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGATCCTCCTGGCTTTTCTaGTCTGCAGTCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRSSWLF*SAVRLP
Trigger: TGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAGGA...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGTTTTGTGTCAATGGGTaGAATCCTGCTCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKFCVNG*NPAHRP
Trigger: AGGCCTGTGAGCAGGATTGCACCCATTGACACAAAA...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTTGGGTTGCAGGCACTTaGATCAGGCTCAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGWVAGT*IRLRKL
Trigger: CAGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCA...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTGAGACAGAGGGCAGGTaGCCTGCTTGCCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPETEGR*PACQAS
Trigger: CGAAGCCTGGCAAGCAGGGCACCTGCCCTCTGTCTC...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGCTCTTCTTCCCAGATaGCATTCTTCATCACATGCT +
Preference number: 4 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFALLPR*HSSSHA
Trigger: AGCATGTGATGAAGAATGCCATCTGGGAAGAAGAGC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGCAGCCACCGGGGACTaGAATGGACAAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGAATGD*NGQRQS
Trigger: GCTCTGCCTTTGTCCATTCCAGTCCCCGGTGGCTGC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCTGCTCTGTTTGGCCATaGAAGCCTCCAGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVCSVWP*KPPGPM
Trigger: CATTGGACCTGGAGGCTTCCATGGCCAAACAGAGCA...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACACTGGGGTCATCAATTTaGCCATCTTCTGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTLGSSI*PSSDSL
Trigger: GAGGGAGTCAGAAGATGGCCAAATTGATGACCCCAG...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGAGTCTTCATGGAAACTaGTTTGGGTCTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWSLHGN*FGSVDL
Trigger: GAGATCAACAGACCCAAACCAGTTTCCATGAAGACT...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGCTTGGGAACAGGGTTaGCACCAGGGAGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGAWEQG*HQGAGQ
Trigger: CTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAGGATGGACACTTGAGTaGCCAGGCTTTGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTGWTLE*PGFGSS
Trigger: TGAAGAACCAAAGCCTGGCCACTCAAGTGTCCATCC...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGCCATTCAAATCCTCCTaGCTTTTCTGCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKPFKSS*LFCSAV
Trigger: GACTGCAGAGCAGAAAAGCCAGGAGGATTTGAATGG...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCGCTGCTGACTCTGGTTaGTGCTCACATGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSAADSG*CSHAWA
Trigger: TGCCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGC...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGCTGCTGACTCTGGTTaGTGCTCACATGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGAADSG*CSHAWA
Trigger: TGCCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCCCCTGCAGGCTGCTGTaGTGTTCTAGTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSPCRLL*CSSSLE
Trigger: CTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGG...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGCCACGGCCACCTCTATaGCCAGGATCCTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMPRPPL*PGSSLP
Trigger: GGGCAGAGAGGATCCTGGGCATAGAGGTGGCCGTGG...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGATGGATGAACTTGGGTTaGAGGCACTTGCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRWMNLG*RHLHQA
Trigger: AGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCA...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGTGGACTTGAAGGGTaGTTTCGCCTCCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRSGLEG*FRLLIL
Trigger: AAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAACCCCTTCACCACCTCTaGCTTGGGAACAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKPLHHL*LGNRVG
Trigger: GCCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGGG...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGACTTTTCCATGAAATaGAACAGAGTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWDFSMK*NRVDLK
Trigger: CTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTTCTCCCCTGGGCTGTaGGTGAGAGCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGFSPGL*VRAITR
Trigger: CCGTGTTATAGCTCTCACTCACAGCCCAGGGGAGAA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAACTGCTCCTGCAGGGCTaGACCCTGGCACAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQLLLQG*TLAQPS
Trigger: CGAGGGCTGTGCCAGGGTTCAGCCCTGCAGGAGCAG...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTCTTTGGAAGGGTTTCTaGGCCTCTTTTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGLWKGF*ASFQDP
Trigger: TGGGTCCTGAAAAGAGGCTCAGAAACCCTTCCAAAG...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAATGCTCTGTCCTTCCTaGAACTTCCCACAGATTCTC +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRMLCPS*NFPQIL
Trigger: GAGAATCTGTGGGAAGTTGCAGGAAGGACAGAGCAT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAATAGAGATCCCTAGCTaGAAGAGAGCCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRIEIPS*KRARRK
Trigger: CTTCCTTCTGGCTCTCTTGCAGCTAGGGATCTCTAT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTAGAGGGCAGGTGCCCTaGTTGCCAGGCTTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFRGQVP*LPGFVF
Trigger: AAAGACGAAGCCTGGCAAGCAGGGCACCTGCCCTCT...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAACTTTGGTGCTCCCTGTaGCCTCTTGGCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKLWCSL*PLGLLM
Trigger: CATCAGCAGGCCAAGAGGCCACAGGGAGCACCAAAG...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGTCCTGGCCAAGGGCTaGAAGCCTGAAGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGVLAKG*KPEVLW
Trigger: CCAAAGAACTTCAGGCTTCCAGCCCTTGGCCAGGAC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGAGTCTTCATGGAAACTaGTTTGGGTCTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKSLHGN*FGSVDL
Trigger: GAGATCAACAGACCCAAACCAGTTTCCATGAAGACT...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTTCACCACCTCTGGCTTaGGAACAGGGTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPSPPLA*EQGWHQ
Trigger: CTGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGA...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGGGCCGCCGGCTAACTaGTTTCAAGAGAAACTGACC +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGGPPAN*FQEKLT
Trigger: GGTCAGTTTCTCTTGAAACCAGTTAGCCGGCGGCCC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGCATTACCCACCTGTGTaGGAGTCTCTCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGHYPPV*ESLCPA
Trigger: AGCTGGGCAGAGAGACTCCCACACAGGTGGGTAATG...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
3UTR CAA 72 bp TCTGGGAAGGTGTATCGAGACTACTTGGACTCTGCTTaGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SGKVYRDYLDSA*CSPVSACEVLR
Trigger: CCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGTCCAAGTAGTCTCGATACACCTTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTCAGGTACTTGCTGCTaGCTCTGGTTGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGSGTCC*LWLLLT
Trigger: TGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATTAAAACTTTCTAACTaGCTTATCAAATCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRLKLSN*LIKSQG
Trigger: GCCCTGGGATTTGATAAGTCAGTTAGAAAGTTTTAA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACATTGTGGACTTTTCCATaGAATGGAACAGAGTGGACT +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTLWTFP*NGTEWT
Trigger: AGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAA...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTCTGTCCTTGTCGACCTaGATCTCTCTGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGLSLST*ISLICP
Trigger: AGGACAAATCAGAGAGATGCAGGTCGACAAGGACAG...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAGGGATGTCCTACTGTaGGTATGGGCTGTAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKRDVLL*VWAVAP
Trigger: TGGCGCTACAGCCCATACGCACAGTAGGACATCCCT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTATCCCCATCGGATGCCTaGCTCCCTAACTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVSPSDA*LPNSLG
Trigger: GCCAAGGGAGTTAGGGAGGCAGGCATCCGATGGGGA...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAAGCAGACTCTGCTCCTaGAGGGCTGAACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVSRLCS*RAEPWH
Trigger: GTGCCAGGGTTCAGCCCTGCAGGAGCAGAGTCTGCT...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTCTTCCCATGAGGGCTTaGAGCTCCAGGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPLPMRA*SSRSVE
Trigger: TTCCACTGACCTGGAGCTGCAAGCCCTCATGGGAAG...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTGCTGCTCACATGCCTaGGCACAGGATCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGCCSHA*AQDLQG
Trigger: ACCTTGAAGATCCTGTGCCCAGGCATGTGAGCAGCA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGATTGGGTTTGATGAGATaGAGGATTCTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRLGLMR*RILGSS
Trigger: TGATGACCCCAGAATCCTCCATCTCATCAAACCCAA...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTGGAGCTGTGAGCTTTTaGAGTCTTCATGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGGAVSF*SLHGNW
Trigger: CCAGTTTCCATGAAGACTCCAAAAGCTCACAGCTCC...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCATCTGCACAGTCCTCTaGCTGTTCTGCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSICTVL*LFCLTV
Trigger: GACAGTGAGGCAGAACAGCCAGAGGACTGTGCAGAT...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGAGCATATAGAAGCCTaGGGGGCCCTTTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGEHIEA*GALSPT
Trigger: TGTAGGAGAAAGGGCCCCCCAGGCTTCTATATGCTC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTGGGGCTGAGCTAGTTTaGTATGTCGGATCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFGAELV*YVGSVD
Trigger: ATCCACGGATCCGACATATCAAACTAGCTCAGCCCC...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAGAACTTTTCTTGCTCTaGACCCCAGTTTCAAACTTT +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTELFLL*TPVSNF
Trigger: AAAGTTTGAAACTGGGGTTCAGAGCAAGAAAAGTTC...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGAATTTGGCCATCTTCTaGCTCCCTCAGACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGNLAIF*LPQTLP
Trigger: AGGCAAGGTCTGAGGGAGTCAGAAGATGGCCAAATT...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACATTCATTCCAGCTCTGTaGGTCATTAAGTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTFIPAL*VIKSSI
Trigger: GATAGAAGACTTAATGACTCACAGAGCTGGAATGAA...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAGAAGCCATCCACATCTaGGCATATAGAAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKEAIHI*AYRSLG
Trigger: CCCCAGGCTTCTATATGCTCAGATGTGGATGGCTTC...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGTTCTTTCCAGTCCCTaGGACACAGGGAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVVLSSP*DTGSHC
Trigger: GCAGTGGCTCCCTGTGTCCCAGGGACTGGAAAGAAC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCAGAGCCAGAAGGAAGTaGACAGCTGGTCTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSRARRK*TAGLRF
Trigger: AAACCTGAGACCAGCTGTCCACTTCCTTCTGGCTCT...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTACACCGGGGACTGGAATaGACAAAGGCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVHRGLE*TKAELC
Trigger: GCAGAGCTCTGCCTTTGTCCATTCCAGTCCCCGGTG...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAATCTGCACAGTCCTCTaGCTGTTCTGCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKICTVL*LFCLTV
Trigger: GACAGTGAGGCAGAACAGCCAGAGGACTGTGCAGAT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTCCCAGGACTTGGTTCTaGAATCTGCACAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFPRTWF*NLHSPL
Trigger: CAGAGGACTGTGCAGATTCCAGAACCAAGTCCTGGG...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAATCTGCCCATTGGACTaGAACACCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKICPLD*NTSAAF
Trigger: GAAGGCAGCAGAGGTGTTCCAGTCCAATGGGCAGAT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTCTTCCATCTGCCCATTaGACTGGAACACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFLPSAH*TGTPLL
Trigger: CAGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAG...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTCAGGCTCAGGAAGCTaGCTTTGTTCTGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGSGSGS*LCSVLL
Trigger: CAGGAGAACAGAACAAAGCCAGCTTCCTGAGCCTGA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTGAGCATATAGAAGCCTaGGGGGCCCTTTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFEHIEA*GALSPT
Trigger: TGTAGGAGAAAGGGCCCCCCAGGCTTCTATATGCTC...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAGAACTTTTCTTGCTCTaGACCCCAGTTTCAAACTTT +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRELFLL*TPVSNF
Trigger: AAAGTTTGAAACTGGGGTTCAGAGCAAGAAAAGTTC...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAAGCAGACTCTGCTCCTaGAGGGCTGAACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQSRLCS*RAEPWH
Trigger: GTGCCAGGGTTCAGCCCTGCAGGAGCAGAGTCTGCT...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGTCCTCTGGCTGTTCTaGCTCACTGTCCTCACTACC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVVLWLF*LTVLTT
Trigger: GGTAGTGAGGACAGTGAGGCAGAACAGCCAGAGGAC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAACTTGGTTCTGGAATCTaGACAGTCCTCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKLGSGI*TVLWLF
Trigger: GAACAGCCAGAGGACTGTGCAGATTCCAGAACCAAG...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAGTGGACTTGAAGGGTaGTTTCGCCTCCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKSGLEG*FRLLIL
Trigger: AAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAGTTCTAGAAGTGCTTTaGTGCTCCCTGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKVLEVL*CSLWPL
Trigger: AAGAGGCCACAGGGAGCACCAAAGCACTTCTAGAAC...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTATCCTTACTTCTTGTTaGGTAGGAGCCACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RERYLQMYSHSSVCANIFILTSC*VGATWV
Trigger: GACCCACGTGGCTCCTACCCAACAAGAAGTAAGGAT...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGGAGCTGTGAGCTTTTaGAGTCTTCATGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGGAVSF*SLHGNW
Trigger: CCAGTTTCCATGAAGACTCCAAAAGCTCACAGCTCC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGGCTGTTCTAGTTCCCTaGAGAGCCCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMAVLVP*RAQDLV
Trigger: AACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGC...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAATCAGGCTCAGGAAGCTaGCTTTGTTCTGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKSGSGS*LCSVLL
Trigger: CAGGAGAACAGAACAAAGCCAGCTTCCTGAGCCTGA...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAGACTTTTCCATGAAATaGAACAGAGTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRDFSMK*NRVDLK
Trigger: CTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTC...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAAATCCGCCCATGACATaGTGCTCTGTTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVNPPMT*CSVWPW
Trigger: CCATGGCCAAACAGAGCATCATGTCATGGGCGGATT...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp GGACTGACCAGCCATGGGCTCATACTGCAGGAATTTGGCATGTCAGAAAATGTCTTAAAACTTTCTAACTaGCTTATCAAATCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLTSHGLILQEFGMSENVLKLSN*LIKSQG
Trigger: GCCCTGGGATTTGATAAGTCAGTTAGAAAGTTTTAA...GACATTTTCTGACATGCCAAATTCCTGCAGTATGAGCCCATGGCTGGTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAATGCTCTGTCCTTCCTaGAACTTCCCACAGATTCTC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKMLCPS*NFPQIL
Trigger: GAGAATCTGTGGGAAGTTGCAGGAAGGACAGAGCAT...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGCATTCTTCATCACATaGTCTGTCCTTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGAFFIT*SVLPAT
Trigger: AGTTGCAGGAAGGACAGAGCATGTGATGAAGAATGC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAATCCAAGCTCATGTCCTaGATTCTCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKSKLMS*ILSSSS
Trigger: GGAAGAAGAGCTGAGAATGCAGGACATGAGCTTGGA...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGGCTAGGAGGATATGGTaGCACTTTTGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMARRIW*HFWDTC
Trigger: ACAGGTGTCCCAAAAGTGCCACCATATCCTCCTAGC...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGCCTCAGACCTTGCCTTaGAGATGTTCTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMPQTLP*RCSSPS
Trigger: GCTTGGAGAAGAACATCTCCAAGGCAAGGTCTGAGG...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTGCTGGTTTGTATCCATaGGAAATCAGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPAGLYP*EIRRSS
Trigger: GGAAGATCTCCTGATTTCTCATGGATACAAACCAGC...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTTGTGGACTTTTCCATaGAATGGAACAGAGTGGACT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGLWTFP*NGTEWT
Trigger: AGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTGCATTCTTCATCACATaGTCTGTCCTTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPAFFIT*SVLPAT
Trigger: AGTTGCAGGAAGGACAGAGCATGTGATGAAGAATGC...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGCTAGGAGGATATGGTaGCACTTTTGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVARRIW*HFWDTC
Trigger: ACAGGTGTCCCAAAAGTGCCACCATATCCTCCTAGC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGCTTTTGGAGTCTTCATaGAAACTGGTTTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGLLESS*KLVWVC
Trigger: ACAGACCCAAACCAGTTTCCATGAAGACTCCAAAAG...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGTCTGAGACAAGGAGTTaGCCTCCCTCATTCTTATCA +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMSETRS*PPSFLS
Trigger: TGATAAGAATGAGGGAGGTCAACTCCTTGTCTCAGA...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGATATGGTGGCACTTTTaGGACACCTGTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMIWWHF*DTCYVT
Trigger: GGTCACATAACAGGTGTCCCAAAAGTGCCACCATAT...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGGAGGTGAGGTACACTaGGCTTCTGATTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVGGEVH*ASDFDH
Trigger: GTGATCAAAATCAGAAGCCCAGTGTACCTCACCTCC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGCTCTTCTTCCCAGATaGCATTCTTCATCACATGCT +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVALLPR*HSSSHA
Trigger: AGCATGTGATGAAGAATGCCATCTGGGAAGAAGAGC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAAGGATCTTCAAGGTATaGGTTTGGAATGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVRIFKV*VWNVLR
Trigger: CCTCAGCACATTCCAAACCCATACCTTGAAGATCCT...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR TCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAAATTTGGTGAGTTCTTaGCTTCCTCTTGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVNLVSS*LPLGSD
Trigger: GTCAGAACCAAGAGGAAGTCAAGAACTCACCAAATT...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR GCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAATAGAGATCCCTAGCTaGAAGAGAGCCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQIEIPS*KRARRK
Trigger: CTTCCTTCTGGCTCTCTTGCAGCTAGGGATCTCTAT...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CCA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTACTTTTGGAGTCTTCATaGAAACTGGTTTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVLLESS*KLVWVC
Trigger: ACAGACCCAAACCAGTTTCCATGAAGACTCCAAAAG...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAGGAGGTGAGGTACACTaGGCTTCTGATTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQGGEVH*ASDFDH
Trigger: GTGATCAAAATCAGAAGCCCAGTGTACCTCACCTCC...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR TCA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAATTCATTCCAGCTCTGTaGGTCATTAAGTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQFIPAL*VIKSSI
Trigger: GATAGAAGACTTAATGACTCACAGAGCTGGAATGAA...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS CCA 90 bp TCTGTTTGGCCATGGAAGCCTCCAGGTCCAATGCCCAGGGGGAGCTaGCCCTGCAGCCACCGGGGACTGGAATGGACAAAGGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SVWPWKPPGPMPRGS*PCSHRGLEWTKAEL
Trigger: GAGCTCTGCCTTTGTCCATTCCAGTCCCCGGTGGCTGCAGGGCCAGCTCCCCCTGGGCATTGGACCTGGAGGCTTCCATGGCCAAACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp TCCAGTCCCTGGGACACAGGGAGCCACTGCCCTCCTGTCTTCCTCTaGTCCAGTAGATGTCGTCTCTACCACTTTGGGGCTGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: SSPWDTGSHCPPVFL*SSRCRLYHFGAERT
Trigger: GGTCCTCTCAGCCCCAAAGTGGTAGAGACGACATCTACTGGAGCAGAGGAAGACAGGAGGGCAGTGGCTCCCTGTGTCCCAGGGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp TTCTCCAGCGCCAGCCCTGCAGGCTGCTGTGCTGTTCTAGTTCCCTaGAGAGCCCAGGACTTGGTTCTGGAATCTGCACAGTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: FSSASPAGCCAVLVP*RAQDLVLESAQSSG
Trigger: GCCAGAGGACTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGCTCGGGGTCCTGTCCTaGTCGACCTGCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWLGVLS*STCISL
Trigger: CAGAGAGATGCAGGTCGACAAGGACAGGACCCCGAG...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTCTGTTCTCCTGGCACTaGGCAGAAGGGACTCCACGG +
Preference number: 5 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASLFSWH*AEGTPR
Trigger: CCGTGGAGTCCCTTCTGCCAAGTGCCAGGAGAACAG...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp CTGCAGTCAGGCTTCCATCTGCCCATTGGACTGGAACACCTCTGCTaGCTTCCTCCTGTGATGGGCCCAGGGACTGTGGATGGACACTTG +
Preference number: 5 (lower is better)
Translates to: LQSGFHLPIGLEHLC*LPPVMGPGTVDGHL
Trigger: CAAGTGTCCATCCACAGTCCCTGGGCCCATCACAGGAGGAAGGCAGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAGCCTGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGATGGCCTCTCCTGGCTTaGTGGCAGGGAGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRWPLLA*WQGGAV
Trigger: CACAGCTCCTCCCTGCCACAAAGCCAGGAGAGGCCA...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp CAACTCATGGCTGGGATCCTTACTTCTTGTTGGGTAGGAGCCACGTaGGTCCCTGTGCTGGTGGTCCTGAAATCCACCTTCTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QLMAGILTSCWVGAT*VPVLVVLKSTFSPG
Trigger: CCCAGGGGAGAAGGTGGATTTCAGGACCACCAGCACAGGGACCCACGTGGCTCCTACCCAACAAGAAGTAAGGATCCCAGCCATGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp CCCTTCACCACCTCTGGCTTGGGAACAGGGTTGGCACCAGGGAGCTaGTCAGAGGTCCCTTTGGACATAGATGCCTGGTTTATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFTTSGLGTGLAPGS*SEVPLDIDAWFMAE
Trigger: CTCAGCCATAAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGCTTCCCATGAGGGCTaGCAGCTCCAGGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFASHEG*QLQVSG
Trigger: TCCACTGACCTGGAGCTGCAAGCCCTCATGGGAAGC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGTGGCCTCTCCTGGCTTaGTGGCAGGGAGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKWPLLA*WQGGAV
Trigger: CACAGCTCCTCCCTGCCACAAAGCCAGGAGAGGCCA...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGGGGTCGGAGCTACATaGCTGGCCTCTCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRGVGAT*LASPGF
Trigger: AAAGCCAGGAGAGGCCAGCAATGTAGCTCCGACCCC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGTTCACCACCTCTGGCTaGGGAACAGGGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWFTTSG*GTGLAP
Trigger: TGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGAA...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACCCCTCTCCACTCGGCTaGGATCATAGGAATCTGCAC +
Preference number: 5 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDPSPLG*DHRNLH
Trigger: GTGCAGATTCCTATGATCCAAGCCGAGTGGAGAGGG...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp TGCGTATGGGCTGTAGCGCCATCCTTGTACCCATTCAATAGGCCTTaGCCAGCTCGGGGTCCTGTCCTTGTCGACCTGCATCTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: CVWAVAPSLYPFNRP*PARGPVLVDLHLSD
Trigger: ATCAGAGAGATGCAGGTCGACAAGGACAGGACCCCGAGCTGGCCAAGGCCTATTGAATGGGTACAAGGATGGCGCTACAGCCCATACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp GAGTTGCTCACGTGTCCTGTCCCCAGGGATGTCCTACTGTGCGTATaGGCTGTAGCGCCATCCTTGTACCCATTCAATAGGCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: ELLTCPVPRDVLLCV*AVAPSLYPFNRPWP
Trigger: TGGCCAAGGCCTATTGAATGGGTACAAGGATGGCGCTACAGCCCATACGCACAGTAGGACATCCCTGGGGACAGGACACGTGAGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp TCCCTGGAGAGCCCAGGACTTGGTTCTGGAATCTGCACAGTCCTCTaGCTGTTCTGCCTCACTGTCCTCACTACCACTACCACCATGGCT +
Preference number: 5 (lower is better)
Translates to: SLESPGLGSGICTVL*LFCLTVLTTTTTMA
Trigger: AGCCATGGTGGTAGTGGTAGTGAGGACAGTGAGGCAGAACAGCCAGAGGACTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGCTCGGGGTCCTGTCCTaGTCGACCTGCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKLGVLS*STCISL
Trigger: CAGAGAGATGCAGGTCGACAAGGACAGGACCCCGAG...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCGTCGTCTCTACCACTTaGGGGCTGAGAGGACCATGC +
Preference number: 5 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFVVSTT*GLRGPC
Trigger: GCATGGTCCTCTCAGCCCCAAAGTGGTAGAGACGAC...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCTTCAAGGTATGGGTTaGGAATGTGCTGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: AKEEPGHCKPHSFQLLPELQGMG*ECAEGV
Trigger: CACCCCCTCAGCACATTCCAAACCCATACCTTGAAG...CTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCTTGTGGAGGAAGACCTaGCGGAGGAGAGCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: HSFQLLPEQDRWANQRAFLWRKT*RRRARH
Trigger: ATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAA...GAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGACATGATGCTCTGTTaGGCCATGGAAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWDMMLC*AMEASR
Trigger: CCTGGAGGCTTCCATGGCCAAACAGAGCATCATGTC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGGCTTCCCATGAGGGCTaGCAGCTCCAGGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKASHEG*QLQVSG
Trigger: TCCACTGACCTGGAGCTGCAAGCCCTCATGGGAAGC...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTCCCTCAGACCTTGCCTaGGAGATGTTCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASPSDLA*EMFFSK
Trigger: CTTGGAGAAGAACATCTCCAAGGCAAGGTCTGAGGG...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp GACTCCACGGCCACCTCTATGCCCAGGATCCTCTCTGCCCTTTCCTaGAGAGACTCACTTGGAAGGACTTCCACGGTGTTCTCTAAATCC +
Preference number: 5 (lower is better)
Translates to: DSTATSMPRILSALS*RDSLGRTSTVFSKS
Trigger: GGATTTAGAGAACACCGTGGAAGTCCTTCCAAGTGAGTCTCTGCAGGAAAGGGCAGAGAGGATCCTGGGCATAGAGGTGGCCGTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp AGAGAAACTGACCGAAGAGTTGTGTGCTATTGCACTGGCCTGTTGTaGACTCCCCCTTCACCACCTCTGGCTTGGGAACAGGGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: RETDRRVVCYCTGLL*TPPSPPLAWEQGWH
Trigger: GTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGGGGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGTTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp GCTTTCGCCTCCTCATCCTTTTTCCCAGGCTCAGGACTGGTGGCCTaGCTTGTAGGGAAGCCATCCACATCTGAGCATATAGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: AFASSSFFPGSGLVA*LVGKPSTSEHIEAW
Trigger: CCAGGCTTCTATATGCTCAGATGTGGATGGCTTCCCTACAAGCCAGGCCACCAGTCCTGAGCCTGGGAAAAAGGATGAGGAGGCGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGGCTGTAGCGCCATCCTaGTACCCATTCAATAGGCCT +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWAVAPS*YPFNRP
Trigger: AGGCCTATTGAATGGGTACAAGGATGGCGCTACAGC...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCCTCCCTAACTCCCTaGGCTTCTTCCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRASLTP*ASSSFP
Trigger: TGGAAAGCTGGAAGAAGCCAAGGGAGTTAGGGAGGC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGGCAATAGGATAGGGTaGTGGAGGAAGACCTTGCGG +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRGNRIG*WRKTLR
Trigger: CCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGGCAGAGCTCTGCTCATaGACTGGTGAAGGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKAELCS*TGEGVG
Trigger: CCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGC...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GTGGCAGGCAAAGGAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTTGGCTGAGGAAGTCCTaGAGAAAGCACTGTTTCGAG +
Preference number: 5 (lower is better)
Translates to: VAGKGGAGTLQTPQFPASWLRKS*RKHCFE
Trigger: CTCGAAACAGTGCTTTCTCAAGGACTTCCTCAGCCA...AGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTCCTTTGCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGACCTGCAGAGACTCACTaGGAAGGACTTCCACGGTGT +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRPAETH*EGLPRC
Trigger: ACACCGTGGAAGTCCTTCCAAGTGAGTCTCTGCAGG...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGCCTCTCTGGATGAACTaGGGTTGCAGGCACTTGCAT +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWPLWMN*GCRHLH
Trigger: ATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGG...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp ACCTTGCGGAGGAGAGCCAGGCATTGCATCATAGAGATCCCTAGCTaGAAGAGAGCCAGAAGGAAGTGGACAGCTGGTCTCAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TLRRRARHCIIEIPS*KRARRKWTAGLRFL
Trigger: GAGAAACCTGAGACCAGCTGTCCACTTCCTTCTGGCTCTCTTGCAGCTAGGGATCTCTATGATGCAATGCCTGGCTCTCCTCCGCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp GCCTGGCTTGTAGGGAAGCCATCCACATCTGAGCATATAGAAGCCTaGGGGGCCCTTTCTCCTACAAAAAGAGGACTCTCAGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AWLVGKPSTSEHIEA*GALSPTKRGLSVQP
Trigger: TGGCTGGACTGAGAGTCCTCTTTTTGTAGGAGAAAGGGCCCCCCAGGCTTCTATATGCTCAGATGTGGATGGCTTCCCTACAAGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGAGGTTTCTCAGGTACTaGCTGCTGACTCTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWRFLRY*LLTLVA
Trigger: AGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCT...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGGACATGATGCTCTGTTaGGCCATGGAAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKDMMLC*AMEASR
Trigger: CCTGGAGGCTTCCATGGCCAAACAGAGCATCATGTC...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTGGCTTGGGAACAGGGTaGGCACCAGGGAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGGLGTG*APGSWS
Trigger: TGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCC...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACATTCACCACCTCTGGCTaGGGAACAGGGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTFTTSG*GTGLAP
Trigger: TGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGAA...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGATAAAGGGGCTGCTTTaGTGTCAATGGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: PGHCKPHSFQLLPEQDRWIKGLL*CQWVQS
Trigger: GGATTGCACCCATTGACACAAAAGCAGCCCCTTTAT...CCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGACTGTTCTCCTGGCACTaGGCAGAAGGGACTCCACGG +
Preference number: 5 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRLFSWH*AEGTPR
Trigger: CCGTGGAGTCCCTTCTGCCAAGTGCCAGGAGAACAG...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGTTGGGTTGCAGGCACTaGCATCAGGCTCAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKLGCRH*HQAQEA
Trigger: AGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCAA...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 90 bp GTCCCTGTGCTGGTGGTCCTGAAATCCACCTTCTCCCCTGGGCTGTaGGTGAGAGCTATAACACGGAGTCTTAAGGGGTTTCCCAAACTT +
Preference number: 5 (lower is better)
Translates to: VPVLVVLKSTFSPGL*VRAITRSLKGFPKL
Trigger: AAGTTTGGGAAACCCCTTAAGACTCCGTGTTATAGCTCTCACTCACAGCCCAGGGGAGAAGGTGGATTTCAGGACCACCAGCACAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp TTTTCAGAGTTGCTCACGTGTCCTGTCCCCAGGGATGTCCTACTGTaGGTATGGGCTGTAGCGCCATCCTTGTACCCATTCAATAGGCCT +
Preference number: 5 (lower is better)
Translates to: FSELLTCPVPRDVLL*VWAVAPSLYPFNRP
Trigger: AGGCCTATTGAATGGGTACAAGGATGGCGCTACAGCCCATACGCACAGTAGGACATCCCTGGGGACAGGACACGTGAGCAACTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp GACAGCTGGTCTCAGGTTTCTCAGGTACTTGCTGCTGACTCTGGTTaGTGCTCACATGCCTGGGCACAGGATCTTCAAGGTATGGGTTTG +
Preference number: 5 (lower is better)
Translates to: DSWSQVSQVLAADSG*CSHAWAQDLQGMGL
Trigger: CAAACCCATACCTTGAAGATCCTGTGCCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCTGAGACCAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp GTCTCGCTCACACATCCCATTCAAATCCTCCTGGCTTTTCTGCTCTaGAGTCAGGCTTCCATCTGCCCATTGGACTGGAACACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VSLTHPIQILLAFLL*SQASICPLDWNTSA
Trigger: AGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAGGATTTGAATGGGATGTGTGAGCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp CCTTCCTCCTGTGATGGGCCCAGGGACTGTGGATGGACACTTGAGTaGCCAGGCTTTGGTTCTTCATTCCAGCTCTGTGAGTCATTAAGT +
Preference number: 5 (lower is better)
Translates to: PSSCDGPRDCGWTLE*PGFGSSFQLCESLS
Trigger: ACTTAATGACTCACAGAGCTGGAATGAAGAACCAAAGCCTGGCCACTCAAGTGTCCATCCACAGTCCCTGGGCCCATCACAGGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp GGCCTTGGGCTAAAGTCTCGCTCACACATCCCATTCAAATCCTCCTaGCTTTTCTGCTCTGCAGTCAGGCTTCCATCTGCCCATTGGACT +
Preference number: 5 (lower is better)
Translates to: GLGLKSRSHIPFKSS*LFCSAVRLPSAHWT
Trigger: AGTCCAATGGGCAGATGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAGGATTTGAATGGGATGTGTGAGCGAGACTTTAGCCCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp AGGGGCTGCTTTTGTGTCAATGGGTGCAATCCTGCTCACAGGCCTTaGGCTAAAGTCTCGCTCACACATCCCATTCAAATCCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RGCFCVNGCNPAHRP*AKVSLTHPIQILLA
Trigger: AGCCAGGAGGATTTGAATGGGATGTGTGAGCGAGACTTTAGCCCAAGGCCTGTGAGCAGGATTGCACCCATTGACACAAAAGCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCTTTCCACTAGCAGGTGGAGGAGCTGTGAGCTTTaGGAGTCTTCATGGAAACTG +
Preference number: 5 (lower is better)
Translates to: FCLSKTGGPTRELSTSRWRSCEL*ESSWKL
Trigger: CAGTTTCCATGAAGACTCCAAAAGCTCACAGCTCCT...CCACCTGCTAGTGGAAAGCTCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TGTTTGTCCACTGCCCCAGGGAGATTTACAGCTCAAACCCCTCCCTACGTGAGCTGGCTGAGGAAGTCCTaGAGAAAGCACTGTTTCGAG +
Preference number: 5 (lower is better)
Translates to: CLSTAPGRFTAQTPPYVSWLRKS*RKHCFE
Trigger: CTCGAAACAGTGCTTTCTCAAGGACTTCCTCAGCCA...GCTCACGTAGGGAGGGGTTTGAGCTGTAAATCTCCCTGGGGCAGTGGACAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS TCA 90 bp CTTATCAAATCCCAGGGCCGCCGGCTAACTGGTTTCAAGAGAAACTaGCCGAAGAGTTGTGTGCTATTGCACTGGCCTGTTGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: LIKSQGRRLTGFKRN*PKSCVLLHWPVVDS
Trigger: GGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGTTTCTCTTGAAACCAGTTAGCCGGCGGCCCTGGGATTTGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp GTAGTGCCAAGCTGTGTGATGAGTCCTCTCTGGATGAACTTGGGTTaGAGGCACTTGCATCAGGCTCAGGAAGCTGGCTTTGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: VVPSCVMSPLWMNLG*RHLHQAQEAGFVLF
Trigger: GAACAGAACAAAGCCAGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGGACTCATCACACAGCTTGGCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp TTGGCACCAGGGAGCTGGTCAGAGGTCCCTTTGGACATAGATGCCTaGTTTATGGCTGAGGAAGTCCTTGAGAAAGCACTGTTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: LAPGSWSEVPLDIDA*FMAEEVLEKALFRD
Trigger: GTCTCGAAACAGTGCTTTCTCAAGGACTTCCTCAGCCATAAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGAGGTTTCTCAGGTACTaGCTGCTGACTCTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKRFLRY*LLTLVA
Trigger: AGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCT...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTTTGTGGAGGAAGACCTaGCGGAGGAGAGCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGLWRKT*RRRARH
Trigger: ATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAA...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAGCATGGCCTTCTGCCTaGATGTCTGTCACATTAGTT +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRAWPSA*MSVTLV
Trigger: AACTAATGTGACAGACATCAAGGCAGAAGGCCATGC...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACACCCTCAGACCTTGCCTaGGAGATGTTCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTPSDLA*EMFFSK
Trigger: CTTGGAGAAGAACATCTCCAAGGCAAGGTCTGAGGG...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGGCTTGGGAACAGGGTaGGCACCAGGGAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGGLGTG*APGSWS
Trigger: TGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GAGGAGCCGGGACACTGCAAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACGTTCTTGACTTCCTCTaGGTTCTGACAGACAGTATA +
Preference number: 5 (lower is better)
Translates to: EEPGHCKPHSFQLLPEQDVLDFL*VLTDSI
Trigger: TATACTGTCTGTCAGAACCAAGAGGAAGTCAAGAAC...GTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTTGCAGTGTCCCGGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGACCCTCTCCACTCGGCTaGGATCATAGGAATCTGCAC +
Preference number: 5 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRPSPLG*DHRNLH
Trigger: GTGCAGATTCCTATGATCCAAGCCGAGTGGAGAGGG...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp AATGTACTGAATAGAACCCCCATGGGTGGCAATAGGATAGGGTTGTaGAGGAAGACCTTGCGGAGGAGAGCCAGGCATTGCATCATAGAG +
Preference number: 5 (lower is better)
Translates to: NVLNRTPMGGNRIGL*RKTLRRRARHCIIE
Trigger: CTCTATGATGCAATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCCACCCATGGGGGTTCTATTCAGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGCGAGCACAGCACGTTTGCCTTGAAACCAAGTGGAGTGGGTAAGAGGAGCTGTGAGCTTTaGGAGTCTTCATGGAAACTG +
Preference number: 5 (lower is better)
Translates to: AKLSEHSTFALKPSGVGKRSCEL*ESSWKL
Trigger: CAGTTTCCATGAAGACTCCAAAAGCTCACAGCTCCT...CTTACCCACTCCACTTGGTTTCAAGGCAAACGTGCTGTGCTCGCTCAGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CTTTATCTTCGTAACAATTCTGTAGGGGTGGCAGGCAAAGGAGGAGCCGGGACAAAGAGTTGTGTGCTATaGCACTGGCCTGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LYLRNNSVGVAGKGGAGTKSCVL*HWPVVD
Trigger: GTCCACAACAGGCCAGTGCAATAGCACACAACTCTT...TGTCCCGGCTCCTCCTTTGCCTGCCACCCCTACAGAATTGTTACGAAGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCGCTTCCATCTGCCCATaGGACTGGAACACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLASICP*DWNTSA
Trigger: AGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAGC...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS TCA 90 bp GAGCTTAGTGTAGGTTTTGCAGGTACCCTCACTCTGTGGCTGTGGTaGAGAGGCATGGCCTTCTGCCTTGATGTCTGTCACATTAGTTGT +
Preference number: 5 (lower is better)
Translates to: ELSVGFAGTLTLWLW*RGMAFCLDVCHISC
Trigger: ACAACTAATGTGACAGACATCAAGGCAGAAGGCCATGCCTCTTCACCACAGCCACAGAGTGAGGGTACCTGCAAAACCTACACTAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 90 bp ATTTGTGGACTTTTCCATGAAATGGAACAGAGTGGACTTGAAGGGTaGTTTCGCCTCCTCATCCTTTTTCCCAGGCTCAGGACTGGTGGC +
Preference number: 5 (lower is better)
Translates to: ICGLFHEMEQSGLEG*FRLLILFPRLRTGG
Trigger: GCCACCAGTCCTGAGCCTGGGAAAAAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCAGTTCTAGAAGTGCTTaGGTGCTCCCTGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLSSRSA*VLPVAS
Trigger: AGAGGCCACAGGGAGCACCAAAGCACTTCTAGAACT...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCGCAGAGCTCTGCTCATaGACTGGTGAAGGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSAELCS*TGEGVG
Trigger: CCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGC...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCAAGAGTTGTGTGCTATaGCACTGGCCTGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLKSCVL*HWPVVD
Trigger: GTCCACAACAGGCCAGTGCAATAGCACACAACTCTT...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTGGAGAGCCCAGGACTaGGTTCTGGAATCTGCACAG +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGWRAQD*VLESAQ
Trigger: CTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AGACAAAATGGAAGTGCAGCTTGTTCCAGACTGAGATACATAAGGCACAACAGCCCTGCAGAGACTCACTaGGAAGGACTTCCACGGTGT +
Preference number: 5 (lower is better)
Translates to: RQNGSAACSRLRYIRHNSPAETH*EGLPRC
Trigger: ACACCGTGGAAGTCCTTCCAAGTGAGTCTCTGCAGG...GCTGTTGTGCCTTATGTATCTCAGTCTGGAACAAGCTGCACTTCCATTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp AGACGCGATTCTGAGTTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAAGTTCTCAACCACTTaGGAAGGGTTTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: RRDSEFTAVNSHLTPSCRKFSTT*EGFLSL
Trigger: GAGGCTCAGAAACCCTTCCAAAGTGGTTGAGAACTT...TCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAACTCAGAATCGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 90 bp TTTGTCCTTGGAGGTGAGGTACACTGGGCTTCTGATTTTGATCACTaGATGCTAAGGCTGTATGGAGGCATACTTCGGAGGCAGTGGTAT +
Preference number: 5 (lower is better)
Translates to: FVLGGEVHWASDFDH*MLRLYGGILRRQWY
Trigger: ATACCACTGCCTCCGAAGTATGCCTCCATACAGCCTTAGCATTCAGTGATCAAAATCAGAAGCCCAGTGTACCTCACCTCCAAGGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp AGCCTCTTTTCAGGACCCACCACATTTGTGGACTTTTCCATGAAATaGAACAGAGTGGACTTGAAGGGTGCTTTCGCCTCCTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: SLFSGPTTFVDFSMK*NRVDLKGAFASSSF
Trigger: AAAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAAATGTGGTGGGTCCTGAAAAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTGCCTCCCTAACTCCCTaGGCTTCTTCCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPASLTP*ASSSFP
Trigger: TGGAAAGCTGGAAGAAGCCAAGGGAGTTAGGGAGGC...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGCTTCAAGGTATGGGTTaGGAATGTGCTGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGLQGMG*ECAEGV
Trigger: CACCCCCTCAGCACATTCCAAACCCATACCTTGAAG...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp AAACCCCACAGTTTCCAGCTTCTGCCTGAGCAAGACAGGTGGGCCAACCAGAGAATGTATCATCAAGCTTaGCCTCTTCATAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: KPHSFQLLPEQDRWANQRMYHQA*PLHRIL
Trigger: CAGAATTCTATGAAGAGGCAAAGCTTGATGATACAT...TCTCTGGTTGGCCCACCTGTCTTGCTCAGGCAGAAGCTGGAAACTGTGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACGGTAGCAGGTTATGTGACAGGAAGTCAGTACAGCACCAGTATGTACACAGGTACTGGTTTGGGTCTGTaGATCTCTGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: TVAGYVTGSQYSTSMYTGTGLGL*ISVLVS
Trigger: GGACACCAATACAGAGATCAACAGACCCAAACCAGT...ACCTGTGTACATACTGGTGCTGTACTGACTTCCTGTCACATAACCTGCTACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGGGGTCGGAGCTACATaGCTGGCCTCTCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVGVGAT*LASPGF
Trigger: AAAGCCAGGAGAGGCCAGCAATGTAGCTCCGACCCC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp TTCACAGCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAATGGAGAGCCCAGGACTaGGTTCTGGAATCTGCACAG +
Preference number: 5 (lower is better)
Translates to: FTAVNSHLTPSCRRVSNKWRAQD*VLESAQ
Trigger: CTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCA...TTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 90 bp AGTTCTTTGGGTTTGATGAGATGGAGGATTCTGGGGTCATCAATTTaGCCATCTTCTGACTCCCTCAGACCTTGCCTTGGAGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: SSLGLMRWRILGSSI*PSSDSLRPCLGDVL
Trigger: AAGAACATCTCCAAGGCAAGGTCTGAGGGAGTCAGAAGATGGCCAAATTGATGACCCCAGAATCCTCCATCTCATCAAACCCAAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTGCTGTAGCGCCATCCTaGTACCCATTCAATAGGCCT +
Preference number: 5 (lower is better)
Translates to: RERYLQMYSHSSVCANIFAVAPS*YPFNRP
Trigger: AGGCCTATTGAATGGGTACAAGGATGGCGCTACAGC...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGTCGTCTCTACCACTTaGGGGCTGAGAGGACCATGC +
Preference number: 5 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVVVSTT*GLRGPC
Trigger: GCATGGTCCTCTCAGCCCCAAAGTGGTAGAGACGAC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGTTGAGTGGCCAGGCTTaGGTTCTTCATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGLSGQA*VLHSSS
Trigger: AGAGCTGGAATGAAGAACCAAAGCCTGGCCACTCAA...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CACCTCACTATCATGTCTTTAAGTTCTGAAACAACCACAGGCACAATTCCTCCTCCTCTCTGGATGAACTaGGGTTGCAGGCACTTGCAT +
Preference number: 5 (lower is better)
Translates to: HLTIMSLSSETTTGTIPPPLWMN*GCRHLH
Trigger: ATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGG...AGGAGGAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGACTGGTTTGGGTCTGTaGATCTCTGTATTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGTGLGL*ISVLVS
Trigger: GGACACCAATACAGAGATCAACAGACCCAAACCAGT...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp CGAGAGCGGTATCTTCAAATGTACTCTCACAGCTCTGTCTGTGCAAATATCTTTTTGAGTGGCCAGGCTTaGGTTCTTCATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RERYLQMYSHSSVCANIFLSGQA*VLHSSS
Trigger: AGAGCTGGAATGAAGAACCAAAGCCTGGCCACTCAA...AAAGATATTTGCACAGACAGAGCTGTGAGAGTACATTTGAAGATACCGCTCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAGCTTCCATCTGCCCATaGGACTGGAACACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVASICP*DWNTSA
Trigger: AGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAGC...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAGGCAATAGGATAGGGTaGTGGAGGAAGACCTTGCGG +
Preference number: 5 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQGNRIG*WRKTLR
Trigger: CCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCC...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp TCATTTTCAGTCCTTCAGGAAATTTCCCCCGAAGAGGCCAAAGACAACCACCTCATGTATCATCAAGCTTaGCCTCTTCATAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: SFSVLQEISPEEAKDNHLMYHQA*PLHRIL
Trigger: CAGAATTCTATGAAGAGGCAAAGCTTGATGATACAT...GAGGTGGTTGTCTTTGGCCTCTTCGGGGGAAATTTCCTGAAGGACTGAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp ACTCTGCTTTGTGTAGTCCAGTCAGTGCATGTGAGGTTCTTAGGAAATAAAATGATAAAGGGGCTGCTTTaGTGTCAATGGGTGCAATCC +
Preference number: 5 (lower is better)
Translates to: TLLCVVQSVHVRFLGNKMIKGLL*CQWVQS
Trigger: GGATTGCACCCATTGACACAAAAGCAGCCCCTTTAT...CATTTTATTTCCTAAGAACCTCACATGCACTGACTGGACTACACAAAGCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp GCAGTTAACTCACACCTAACTCCAAGCTGCCGAAGGGTTAGTAATAAAAATGGGGTTCTTGACTTCCTCTaGGTTCTGACAGACAGTATA +
Preference number: 5 (lower is better)
Translates to: AVNSHLTPSCRRVSNKNGVLDFL*VLTDSI
Trigger: TATACTGTCTGTCAGAACCAAGAGGAAGTCAAGAAC...CCCATTTTTATTACTAACCCTTCGGCAGCTTGGAGTTAGGTGTGAGTTAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAATTGGGTTGCAGGCACTaGCATCAGGCTCAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQLGCRH*HQAQEA
Trigger: AGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCAA...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS-3UTR CAA 90 bp ATAGAGACAGATGGTGTCAGCAGATCACTGCTTTATCTTCGTAACAATTCTGTAAAGTTCTCAACCACTTaGGAAGGGTTTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: IETDGVSRSLLYLRNNSVKFSTT*EGFLSL
Trigger: GAGGCTCAGAAACCCTTCCAAAGTGGTTGAGAACTT...TACAGAATTGTTACGAAGATAAAGCAGTGATCTGCTGACACCATCTGTCTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS-3UTR CAA 90 bp ACTGATCCCAAGCACTTTTCAGAATATGCAAGATTAACTAGTCATTCTAGACAAGCATGGCCTTCTGCCTaGATGTCTGTCACATTAGTT +
Preference number: 5 (lower is better)
Translates to: TDPKHFSEYARLTSHSRQAWPSA*MSVTLV
Trigger: AACTAATGTGACAGACATCAAGGCAGAAGGCCATGC...TTGTCTAGAATGACTAGTTAATCTTGCATATTCTGAAAAGTGCTTGGGATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037029.7
CDS GCA 72 bp GGGGAAGCTACATTCTCCAGCGCCAGCCCTGCAGGCTaGTGTGCTGTTCTAGTTCCCTGGAGAGCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: GEATFSSASPAG*CAVLVPWRAQD
Trigger: GTCCTGGGCTCTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAGAATGTAGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp GGCCTTGGCCAGCTCGGGGTCCTGTCCTTGTCGACCTaGATCTCTCTGATTTGTCCTCACATGGTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GLGQLGVLSLST*ISLICPHMVLR
Trigger: CCGCAGCACCATGTGAGGACAAATCAGAGAGATGCAGGTCGACAAGGACAGGACCCCGAGCTGGCCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp AGCCACCGGGGACTGGAATGGACAAAGGCAGAGCTCTaGTCATTGACTGGTGAAGGCGTTGGGCCCCGTGGT +
Preference number: 6 (lower is better)
Translates to: SHRGLEWTKAEL*SLTGEGVGPRG
Trigger: ACCACGGGGCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGCCTTTGTCCATTCCAGTCCCCGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp CCTGTTGTGGACTCCCCCTTCACCACCTCTGGCTTGGGAACAGGGTaGGCACCAGGGAGCTGGTCAGAGGTCCCTTTGGACATAGATGCC +
Preference number: 6 (lower is better)
Translates to: PVVDSPFTTSGLGTG*APGSWSEVPLDIDA
Trigger: GGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGGGGAGTCCACAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp GGAATGGACAAAGGCAGAGCTCTGCTCATTGACTGGTaGAGGCGTTGGGCCCCGTGGTACCGAAGGGGCATC +
Preference number: 6 (lower is better)
Translates to: GMDKGRALLIDW*RRWAPWYRRGI
Trigger: GATGCCCCTTCGGTACCACGGGGCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGCCTTTGTCCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp GGGGACTGGAATGGACAAAGGCAGAGCTCTGCTCATTaGCTGGTGAAGGCGTTGGGCCCCGTGGTACCGAAG +
Preference number: 6 (lower is better)
Translates to: GDWNGQRQSSAH*LVKALGPVVPK
Trigger: CTTCGGTACCACGGGGCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGCCTTTGTCCATTCCAGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp TTGTCCCTCGGCACTTCGGGGTGTCCGTTTTCATTCTaGGAGACAGAGGGCAGGTGCCCTGCTTGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LSLGTSGCPFSF*ETEGRCPACQA
Trigger: AGCCTGGCAAGCAGGGCACCTGCCCTCTGTCTCTCAGAATGAAAACGGACACCCCGAAGTGCCGAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp CAGTGGTATCTGGGCATGTTGGGGTCGGAGCTACATTaGTGGCCTCTCCTGGCTTTGTGGCAGGGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: QWYLGMLGSELH*WPLLALWQGGA
Trigger: AGCTCCTCCCTGCCACAAAGCCAGGAGAGGCCAGCAATGTAGCTCCGACCCCAACATGCCCAGATACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp AGCTACATTCTCCAGCGCCAGCCCTGCAGGCTGCTGTaGTGTTCTAGTTCCCTGGAGAGCCCAGGACTTGGT +
Preference number: 6 (lower is better)
Translates to: SYILQRQPCRLL*CSSSLESPGLG
Trigger: ACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAGAATGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GCCAGCCCTGCAGGCTGCTGTGCTGTTCTAGTTCCCTaGAGAGCCCAGGACTTGGTTCTGGAATCTGCACAG +
Preference number: 6 (lower is better)
Translates to: ASPAGCCAVLVP*RAQDLVLESAQ
Trigger: CTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp CGGGGTCCTGTCCTTGTCGACCTGCATCTCTCTGATTaGTCCTCACATGGTGCTGCGGCATCTCGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: RGPVLVDLHLSD*SSHGAAASRAG
Trigger: ACCAGCCCGAGATGCCGCAGCACCATGTGAGGACAAATCAGAGAGATGCAGGTCGACAAGGACAGGACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp CGGGGACTGGAATGGACAAAGGCAGAGCTCTGCTCATaGACTGGTGAAGGCGTTGGGCCCCGTGGTACCGAA +
Preference number: 6 (lower is better)
Translates to: RGLEWTKAELCS*TGEGVGPRGTE
Trigger: TTCGGTACCACGGGGCCCAACGCCTTCACCAGTCAATGAGCAGAGCTCTGCCTTTGTCCATTCCAGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp GTCCCCAGGGATGTCCTACTGTGCGTATGGGCTGTAGCGCCATCCTaGTACCCATTCAATAGGCCTTGGCCAGCTCGGGGTCCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: VPRDVLLCVWAVAPS*YPFNRPWPARGPVL
Trigger: AAGGACAGGACCCCGAGCTGGCCAAGGCCTATTGAATGGGTACAAGGATGGCGCTACAGCCCATACGCACAGTAGGACATCCCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp TGGTGCTCCCTGTGGCCTCTTGGCCTGCTGATGCGGTTTTCAGAGTaGCTCACGTGTCCTGTCCCCAGGGATGTCCTACTGTGCGTATGG +
Preference number: 6 (lower is better)
Translates to: WCSLWPLGLLMRFSE*LTCPVPRDVLLCVW
Trigger: CCATACGCACAGTAGGACATCCCTGGGGACAGGACACGTGAGCAACTCTGAAAACCGCATCAGCAGGCCAAGAGGCCACAGGGAGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp TCTATCTGGGGAAGCTACATTCTCCAGCGCCAGCCCTaGAGGCTGCTGTGCTGTTCTAGTTCCCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SIWGSYILQRQP*RLLCCSSSLES
Trigger: GCTCTCCAGGGAACTAGAACAGCACAGCAGCCTGCAGGGCTGGCGCTGGAGAATGTAGCTTCCCCAGATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GCTGTAGCGCCATCCTTGTACCCATTCAATAGGCCTTaGCCAGCTCGGGGTCCTGTCCTTGTCGACCTGCAT +
Preference number: 6 (lower is better)
Translates to: AVAPSLYPFNRP*PARGPVLVDLH
Trigger: ATGCAGGTCGACAAGGACAGGACCCCGAGCTGGCCAAGGCCTATTGAATGGGTACAAGGATGGCGCTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp CTGTGGCCTCTTGGCCTGCTGATGCGGTTTTCAGAGTaGCTCACGTGTCCTGTCCCCAGGGATGTCCTACTG +
Preference number: 6 (lower is better)
Translates to: LWPLGLLMRFSE*LTCPVPRDVLL
Trigger: CAGTAGGACATCCCTGGGGACAGGACACGTGAGCAACTCTGAAAACCGCATCAGCAGGCCAAGAGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp CCAGGGCCGCCGGCTAACTGGTTTCAAGAGAAACTGACCGAAGAGTaGTGTGCTATTGCACTGGCCTGTTGTGGACTCCCCCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: PGPPANWFQEKLTEE*CAIALACCGLPLHH
Trigger: GTGGTGAAGGGGGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGTTTCTCTTGAAACCAGTTAGCCGGCGGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp AAGTGCTTTGGTGCTCCCTGTGGCCTCTTGGCCTGCTaGTGCGGTTTTCAGAGTTGCTCACGTGTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: KCFGAPCGLLAC*CGFQSCSRVLS
Trigger: GGACAGGACACGTGAGCAACTCTGAAAACCGCATCAGCAGGCCAAGAGGCCACAGGGAGCACCAAAGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp GGACAGCTGGTCTCAGGTTTCTCAGGTACTTGCTGCTaGCTCTGGTTGCTGCTCACATGCCTGGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: GQLVSGFSGTCC*LWLLLTCLGTG
Trigger: TCCTGTGCCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCTGAGACCAGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp TTGCTCACGTGTCCTGTCCCCAGGGATGTCCTACTGTaGGTATGGGCTGTAGCGCCATCCTTGTACCCATTC +
Preference number: 6 (lower is better)
Translates to: LLTCPVPRDVLL*VWAVAPSLYPF
Trigger: GAATGGGTACAAGGATGGCGCTACAGCCCATACGCACAGTAGGACATCCCTGGGGACAGGACACGTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp CTCCTGGCTTTTCTGCTCTGCAGTCAGGCTTCCATCTaGCCATTGGACTGGAACACCTCTGCTGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLAFLLCSQASI*PLDWNTSAAFL
Trigger: GAGGAAGGCAGCAGAGGTGTTCCAGTCCAATGGGCAGATGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp CCATTACCCACCTGTGTGGGAGTCTCTCTGCCCAGCTaGACAGACCCTACAGCATCGCCGAATTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: PLPTCVGVSLPS*TDPTASPNLVS
Trigger: ACTCACCAAATTCGGCGATGCTGTAGGGTCTGTGCAGCTGGGCAGAGAGACTCCCACACAGGTGGGTAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GCTGGGATCCTTACTTCTTGTTGGGTAGGAGCCACGTaGGTCCCTGTGCTGGTGGTCCTGAAATCCACCTTC +
Preference number: 6 (lower is better)
Translates to: AGILTSCWVGAT*VPVLVVLKSTF
Trigger: GAAGGTGGATTTCAGGACCACCAGCACAGGGACCCACGTGGCTCCTACCCAACAAGAAGTAAGGATCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp ATACTCAGCAGACTCTGCTCCTGCAGGGCTGAACCCTaGCACAGCCCTCGGGTCTTATCAGCAACCAGCTTA +
Preference number: 6 (lower is better)
Translates to: ILSRLCSCRAEP*HSPRVLSATSL
Trigger: TAAGCTGGTTGCTGATAAGACCCGAGGGCTGTGCCAGGGTTCAGCCCTGCAGGAGCAGAGTCTGCTGAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp ACCTCTGGCTTGGGAACAGGGTTGGCACCAGGGAGCTaGTCAGAGGTCCCTTTGGACATAGATGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: TSGLGTGLAPGS*SEVPLDIDAWF
Trigger: AAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp AGAACCCCCATGGGTGGCAATAGGATAGGGTTGTGGAGGAAGACCTaGCGGAGGAGAGCCAGGCATTGCATCATAGAGATCCCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: RTPMGGNRIGLWRKT*RRRARHCIIEIPSC
Trigger: GCAGCTAGGGATCTCTATGATGCAATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCCACCCATGGGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp TCCGTTTTCATTCTGAGAGACAGAGGGCAGGTGCCCTaGTTGCCAGGCTTCGTCTTTACCACCCAGGGAAGT +
Preference number: 6 (lower is better)
Translates to: SVFILRDRGQVP*LPGFVFTTQGS
Trigger: ACTTCCCTGGGTGGTAAAGACGAAGCCTGGCAAGCAGGGCACCTGCCCTCTGTCTCTCAGAATGAAAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp ACGTGTCCTGTCCCCAGGGATGTCCTACTGTGCGTATaGGCTGTAGCGCCATCCTTGTACCCATTCAATAGG +
Preference number: 6 (lower is better)
Translates to: TCPVPRDVLLCV*AVAPSLYPFNR
Trigger: CCTATTGAATGGGTACAAGGATGGCGCTACAGCCCATACGCACAGTAGGACATCCCTGGGGACAGGACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp AATAGAACCCCCATGGGTGGCAATAGGATAGGGTTGTaGAGGAAGACCTTGCGGAGGAGAGCCAGGCATTGC +
Preference number: 6 (lower is better)
Translates to: NRTPMGGNRIGL*RKTLRRRARHC
Trigger: GCAATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCCACCCATGGGGGTTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp TGTGATGGGCCCAGGGACTGTGGATGGACACTTGAGTaGCCAGGCTTTGGTTCTTCATTCCAGCTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: CDGPRDCGWTLE*PGFGSSFQLCE
Trigger: CTCACAGAGCTGGAATGAAGAACCAAAGCCTGGCCACTCAAGTGTCCATCCACAGTCCCTGGGCCCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp AGGAAGTGGACAGCTGGTCTCAGGTTTCTCAGGTACTaGCTGCTGACTCTGGTTGCTGCTCACATGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RKWTAGLRFLRY*LLTLVAAHMPG
Trigger: CCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCTGAGACCAGCTGTCCACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp ACAGGGTTGGCACCAGGGAGCTGGTCAGAGGTCCCTTaGGACATAGATGCCTGGTTTATGGCTGAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: TGLAPGSWSEVP*DIDAWFMAEEV
Trigger: GACTTCCTCAGCCATAAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAACCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp ACTGACCGAAGAGTTGTGTGCTATTGCACTGGCCTGTaGTGGACTCCCCCTTCACCACCTCTGGCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: TDRRVVCYCTGL*WTPPSPPLAWE
Trigger: TTCCCAAGCCAGAGGTGGTGAAGGGGGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp GGCTTGGGAACAGGGTTGGCACCAGGGAGCTGGTCAGAGGTCCCTTaGGACATAGATGCCTGGTTTATGGCTGAGGAAGTCCTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: GLGTGLAPGSWSEVP*DIDAWFMAEEVLEK
Trigger: TTTCTCAAGGACTTCCTCAGCCATAAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCCTGGTGCCAACCCTGTTCCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp TCAAGAGAAACTGACCGAAGAGTTGTGTGCTATTGCACTGGCCTGTaGTGGACTCCCCCTTCACCACCTCTGGCTTGGGAACAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: SRETDRRVVCYCTGL*WTPPSPPLAWEQGW
Trigger: CCAACCCTGTTCCCAAGCCAGAGGTGGTGAAGGGGGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGTTTCTCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp AGGAGAGCCAGGCATTGCATCATAGAGATCCCTAGCTaGAAGAGAGCCAGAAGGAAGTGGACAGCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: RRARHCIIEIPS*KRARRKWTAGL
Trigger: GAGACCAGCTGTCCACTTCCTTCTGGCTCTCTTGCAGCTAGGGATCTCTATGATGCAATGCCTGGCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp TTGTGGAGGAAGACCTTGCGGAGGAGAGCCAGGCATTaGATCATAGAGATCCCTAGCTGCAAGAGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LWRKTLRRRARH*IIEIPSCKRAR
Trigger: TCTGGCTCTCTTGCAGCTAGGGATCTCTATGATGCAATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp TTTAAAAACCGTGCCTCAGGAGTTCTAGAAGTGCTTTaGTGCTCCCTGTGGCCTCTTGGCCTGCTGATGCGG +
Preference number: 6 (lower is better)
Translates to: FKNRASGVLEVL*CSLWPLGLLMR
Trigger: CCGCATCAGCAGGCCAAGAGGCCACAGGGAGCACCAAAGCACTTCTAGAACTCCTGAGGCACGGTTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp AGCCTTCTCAAGGTTCCTCATGGGTTCCGAAGGGGATaGGAAGCTAGGAGGATATGGTGGCACTTTTGGGAC +
Preference number: 6 (lower is better)
Translates to: SLLKVPHGFRRG*EARRIWWHFWD
Trigger: GTCCCAAAAGTGCCACCATATCCTCCTAGCTTCCCATCCCCTTCGGAACCCATGAGGAACCTTGAGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp ATGCTAAGGCTGTATGGAGGCATACTTCGGAGGCAGTaGTATCTGGGCATGTTGGGGTCGGAGCTACATTGC +
Preference number: 6 (lower is better)
Translates to: MLRLYGGILRRQ*YLGMLGSELHC
Trigger: GCAATGTAGCTCCGACCCCAACATGCCCAGATACCACTGCCTCCGAAGTATGCCTCCATACAGCCTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp CCACTGGTAGTGCCAAGCTGTGTGATGAGTCCTCTCTaGATGAACTTGGGTTGCAGGCACTTGCATCAGGCT +
Preference number: 6 (lower is better)
Translates to: PLVVPSCVMSPL*MNLGCRHLHQA
Trigger: AGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGGACTCATCACACAGCTTGGCACTACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp TGCTGTGCTGTTCTAGTTCCCTGGAGAGCCCAGGACTaGGTTCTGGAATCTGCACAGTCCTCTGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: CCAVLVPWRAQD*VLESAQSSGCS
Trigger: AGAACAGCCAGAGGACTGTGCAGATTCCAGAACCAAGTCCTGGGCTCTCCAGGGAACTAGAACAGCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp GTTTTCATTCTGAGAGACAGAGGGCAGGTGCCCTGCTaGCCAGGCTTCGTCTTTACCACCCAGGGAAGTAAG +
Preference number: 6 (lower is better)
Translates to: VFILRDRGQVPC*PGFVFTTQGSK
Trigger: CTTACTTCCCTGGGTGGTAAAGACGAAGCCTGGCAAGCAGGGCACCTGCCCTCTGTCTCTCAGAATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp AGCTGTGTGATGAGTCCTCTCTGGATGAACTTGGGTTGCAGGCACTaGCATCAGGCTCAGGAAGCTGGCTTTGTTCTGTTCTCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SCVMSPLWMNLGCRH*HQAQEAGFVLFSWH
Trigger: GTGCCAGGAGAACAGAACAAAGCCAGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGGACTCATCACACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp TCTCAGGTTTCTCAGGTACTTGCTGCTGACTCTGGTTaGTGCTCACATGCCTGGGCACAGGATCTTCAAGGT +
Preference number: 6 (lower is better)
Translates to: SQVSQVLAADSG*CSHAWAQDLQG
Trigger: ACCTTGAAGATCCTGTGCCCAGGCATGTGAGCAGCAACCAGAGTCAGCAGCAAGTACCTGAGAAACCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp CATGGGTTCCGAAGGGGATGGGAAGCTAGGAGGATATaGTGGCACTTTTGGGACACCTGTTATGTGACCATC +
Preference number: 6 (lower is better)
Translates to: HGFRRGWEARRI*WHFWDTCYVTI
Trigger: GATGGTCACATAACAGGTGTCCCAAAAGTGCCACCATATCCTCCTAGCTTCCCATCCCCTTCGGAACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GGGAGCTGGTCAGAGGTCCCTTTGGACATAGATGCCTaGTTTATGGCTGAGGAAGTCCTTGAGAAAGCACTG +
Preference number: 6 (lower is better)
Translates to: GSWSEVPLDIDA*FMAEEVLEKAL
Trigger: CAGTGCTTTCTCAAGGACTTCCTCAGCCATAAACCAGGCATCTATGTCCAAAGGGACCTCTGACCAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp TCCTCATCCTTTTTCCCAGGCTCAGGACTGGTGGCCTaGCTTGTAGGGAAGCCATCCACATCTGAGCATATA +
Preference number: 6 (lower is better)
Translates to: SSSFFPGSGLVA*LVGKPSTSEHI
Trigger: TATATGCTCAGATGTGGATGGCTTCCCTACAAGCCAGGCCACCAGTCCTGAGCCTGGGAAAAAGGATGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp AGGGAAGTAAGGCCTTCTGAAAGCCAGGCTGAACTTTaGATGACCTTTAAGGGGTCAGGCTCCTCCACGGAG +
Preference number: 6 (lower is better)
Translates to: REVRPSESQAEL*MTFKGSGSSTE
Trigger: CTCCGTGGAGGAGCCTGACCCCTTAAAGGTCATCAAAAGTTCAGCCTGGCTTTCAGAAGGCCTTACTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp TGGAATGTACTGAATAGAACCCCCATGGGTGGCAATAGGATAGGGTaGTGGAGGAAGACCTTGCGGAGGAGAGCCAGGCATTGCATCATA +
Preference number: 6 (lower is better)
Translates to: WNVLNRTPMGGNRIG*WRKTLRRRARHCII
Trigger: TATGATGCAATGCCTGGCTCTCCTCCGCAAGGTCTTCCTCCACAACCCTATCCTATTGCCACCCATGGGGGTTCTATTCAGTACATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp CCAGCTGCACAGACCCTACAGCATCGCCGAATTTGGTaGGTTCTTGACTTCCTCTTGGTTCTGACAGACAGT +
Preference number: 6 (lower is better)
Translates to: PAAQTLQHRRIW*VLDFLLVLTDS
Trigger: ACTGTCTGTCAGAACCAAGAGGAAGTCAAGAACTCACCAAATTCGGCGATGCTGTAGGGTCTGTGCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS GCA 72 bp GTTTCAAGAGAAACTGACCGAAGAGTTGTGTGCTATTaGACTGGCCTGTTGTGGACTCCCCCTTCACCACCT +
Preference number: 6 (lower is better)
Translates to: VSRETDRRVVCY*TGLLWTPPSPP
Trigger: AGGTGGTGAAGGGGGAGTCCACAACAGGCCAGTGCAATAGCACACAACTCTTCGGTCAGTTTCTCTTGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp CTAAAGTCTCGCTCACACATCCCATTCAAATCCTCCTaGCTTTTCTGCTCTGCAGTCAGGCTTCCATCTGCC +
Preference number: 6 (lower is better)
Translates to: LKSRSHIPFKSS*LFCSAVRLPSA
Trigger: GGCAGATGGAAGCCTGACTGCAGAGCAGAAAAGCCAGGAGGATTTGAATGGGATGTGTGAGCGAGACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GTAGGGAAGCCATCCACATCTGAGCATATAGAAGCCTaGGGGGCCCTTTCTCCTACAAAAAGAGGACTCTCA +
Preference number: 6 (lower is better)
Translates to: VGKPSTSEHIEA*GALSPTKRGLS
Trigger: TGAGAGTCCTCTTTTTGTAGGAGAAAGGGCCCCCCAGGCTTCTATATGCTCAGATGTGGATGGCTTCCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp CTCTGTGGCTGTGGTGAAGAGGCATGGCCTTCTGCCTaGATGTCTGTCACATTAGTTGTTAATCCGCCCATG +
Preference number: 6 (lower is better)
Translates to: LCGCGEEAWPSA*MSVTLVVNPPM
Trigger: CATGGGCGGATTAACAACTAATGTGACAGACATCAAGGCAGAAGGCCATGCCTCTTCACCACAGCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp ATGAGTCCTCTCTGGATGAACTTGGGTTGCAGGCACTaGCATCAGGCTCAGGAAGCTGGCTTTGTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: MSPLWMNLGCRH*HQAQEAGFVLF
Trigger: GAACAGAACAAAGCCAGCTTCCTGAGCCTGATGCAAGTGCCTGCAACCCAAGTTCATCCAGAGAGGACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 90 bp CCCACCACATTTGTGGACTTTTCCATGAAATGGAACAGAGTGGACTaGAAGGGTGCTTTCGCCTCCTCATCCTTTTTCCCAGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PTTFVDFSMKWNRVD*KGAFASSSFFPGSG
Trigger: TCCTGAGCCTGGGAAAAAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAAATGTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp GGAGGTGAGGTACACTGGGCTTCTGATTTTGATCACTaGATGCTAAGGCTGTATGGAGGCATACTTCGGAGG +
Preference number: 6 (lower is better)
Translates to: GGEVHWASDFDH*MLRLYGGILRR
Trigger: CCTCCGAAGTATGCCTCCATACAGCCTTAGCATTCAGTGATCAAAATCAGAAGCCCAGTGTACCTCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp GGTTTGATGAGATGGAGGATTCTGGGGTCATCAATTTaGCCATCTTCTGACTCCCTCAGACCTTGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: GLMRWRILGSSI*PSSDSLRPCLG
Trigger: TCCAAGGCAAGGTCTGAGGGAGTCAGAAGATGGCCAAATTGATGACCCCAGAATCCTCCATCTCATCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CCA 72 bp TCAGGACCCACCACATTTGTGGACTTTTCCATGAAATaGAACAGAGTGGACTTGAAGGGTGCTTTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: SGPTTFVDFSMK*NRVDLKGAFAS
Trigger: GGAGGCGAAAGCACCCTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAAATGTGGTGGGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp CTCTTGGTTCTGACAGACAGTATAAAGGGGCTGCTTTaGTGTCAATGGGTGCAATCCTGCTCACAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LLVLTDSIKGLL*CQWVQSCSQAL
Trigger: CAAGGCCTGTGAGCAGGATTGCACCCATTGACACAAAAGCAGCCCCTTTATACTGTCTGTCAGAACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp TTTGTGGACTTTTCCATGAAATGGAACAGAGTGGACTaGAAGGGTGCTTTCGCCTCCTCATCCTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: FVDFSMKWNRVD*KGAFASSSFFP
Trigger: TGGGAAAAAGGATGAGGAGGCGAAAGCACCCTTCAAGTCCACTCTGTTCCATTTCATGGAAAAGTCCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS CAA 72 bp GGTGATACCAGTTTTTCTTGTAAGTTCTCAACCACTTaGGAAGGGTTTCTGAGCCTCTTTTCAGGACCCACC +
Preference number: 6 (lower is better)
Translates to: GDTSFSCKFSTT*EGFLSLFSGPT
Trigger: GGTGGGTCCTGAAAAGAGGCTCAGAAACCCTTCCAAAGTGGTTGAGAACTTACAAGAAAAACTGGTATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp TTGCCTCTTCATAGAATTCTGGGGGCTGAGCTAGTTTaGTATGTCGGATCCGTGGATCATCAAATGGAATGT +
Preference number: 6 (lower is better)
Translates to: LPLHRILGAELV*YVGSVDHQMEC
Trigger: ACATTCCATTTGATGATCCACGGATCCGACATATCAAACTAGCTCAGCCCCCAGAATTCTATGAAGAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2
CDS TCA 72 bp TTTCTTGTAAGTTCTCAACCACTTTGGAAGGGTTTCTaGGCCTCTTTTCAGGACCCACCACATTTGTGGACT +
Preference number: 6 (lower is better)
Translates to: FLVSSQPLWKGF*ASFQDPPHLWT
Trigger: AGTCCACAAATGTGGTGGGTCCTGAAAAGAGGCTCAGAAACCCTTCCAAAGTGGTTGAGAACTTACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037029.7
ENSMUST00000234153.2