Pregenerated sensors for JAML (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048534Ensembl transcript IDs: ENSMUST00000050020.8, ENSMUST00000215880.2, ENSMUST00000216426.2, ENSMUST00000217074.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTTCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTGCCTaGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: PLLGEVRGLPPLISA*LSGAVQPSCQTPNP Trigger: AGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR CCA 90 bp | GCACATGCAGGGACCACAAAGGCCAGAAGAAGGTGTCAGCTCCCTTaGAATTGGAGTTACAGTTATGAGCCACCATGTGGATGCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: AHAGTTKARRRCQLP*NWSYSYEPPCGCWA Trigger: TGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCAAGGGAGCTGACACCTTCTTCTGGCCTTTGTGGTCCCTGCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 90 bp | GCAGGGACCACAAAGGCCAGAAGAAGGTGTCAGCTCCCTTGGAATTaGAGTTACAGTTATGAGCCACCATGTGGATGCTGGGCATCAAAC | + |
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Preference number: 1 (lower is better) Translates to: AGTTKARRRCQLPWN*SYSYEPPCGCWASN Trigger: GTTTGATGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCAAGGGAGCTGACACCTTCTTCTGGCCTTTGTGGTCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 90 bp | CTCCCTTGGAATTGGAGTTACAGTTATGAGCCACCATGTGGATGCTaGGCATCAAACCCCAGTCTTCTGCAAGAGCAGTCAGTTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LPWNWSYSYEPPCGC*ASNPSLLQEQSVLL Trigger: TAAGAGAACTGACTGCTCTTGCAGAAGACTGGGGTTTGATGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCAAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 90 bp | ATTCAATCGTTGGCTGTTCGCTTTGGCAAGCCTGTTCAATGCATTTaGAAAACATGGATGTCCAAACTCCACAGGCCTAGCTTCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: IQSLAVRFGKPVQCI*KTWMSKLHRPSFSH Trigger: ATGGCTGAAGCTAGGCCTGTGGAGTTTGGACATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 90 bp | AGTCTCATATTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTTaGCAAGCCTGTTCAATGCATTTGGAAAACATGGATGTCCAAACT | + |
|
Preference number: 1 (lower is better) Translates to: SLIFQTKDSIVGCSL*QACSMHLENMDVQT Trigger: AGTTTGGACATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR CCA 90 bp | GCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGCCCCTCATCAGTGCCTaGTTATCCGGAGCAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: AQGRPGCSPSSPARTPLLPLISA*LSGAVQ Trigger: CTGAACTGCTCCGGATAACCAGGCACTGATGAGGGG...CAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCTTGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGCCCGCAAGTTTGCTCGGTTTTaGAAATTCCCCAAGGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: ESLKAQGRPGCSPSSPARKFARF*KFPKVT Trigger: AGTCACCTTGGGGAATTTCCAAAACCGAGCAAACTT...GCGGGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCATTGTGGCTCTCCTCAAAGAACACTCTCTCAGGAGTTCCATGCTTCAAGCAGTTCAGCCTTCCTaGCAGACTCCAAACCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: ESIVALLKEHSLRSSMLQAVQPS*QTPNPP Trigger: CGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGC...TTGAAGCATGGAACTCCTGAGAGAGTGTTCTTTGAGGAGAGCCACAATGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTCCCTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGAAGTTTGCTCGGTTTTaGAAATTCCCCAAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: RSPSPHQCLVIRSSSAFLKFARF*KFPKVT Trigger: AGTCACCTTGGGGAATTTCCAAAACCGAGCAAACTT...CAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATGGAGAGCTTGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCACCTTCTCAGAAAGTTTaGTCGGTTTTGGAAATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PMESLKAQGRPGCSPSSPPSQKV*SVLEIP Trigger: GGGAATTTCCAAAACCGAGCAAACTTTCTGAGAAGG...TGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTCCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCCCTTCTCAGAAAGTTTaGTCGGTTTTGGAAATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SAFLPDSKPSVFSLLMEAPSQKV*SVLEIP Trigger: GGGAATTTCCAAAACCGAGCAAACTTTCTGAGAAGG...GGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCATTGTGGCTCTCCTCAAAGAACACTCTCTCAGGAGTTCCATGCTTCAACCGTCTTCAGCCTTTTaGTGGAGGCCAAGACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ESIVALLKEHSLRSSMLQPSSAF*WRPRPD Trigger: ATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGG...TTGAAGCATGGAACTCCTGAGAGAGTGTTCTTTGAGGAGAGCCACAATGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTCTCTTAGTAGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACCCGTCTTCAGCCTTTTaGTGGAGGCCAAGACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: CVSLSSSSAKTNNKQANHPSSAF*WRPRPD Trigger: ATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGG...GTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCTACTAAGAGACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR CAA 90 bp | GAGTCTCATATTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTaGGCAAGCCTGTTCAATGCATTTGGAAAACATGGATGTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ESHISDQGFNRWLFA*ASLFNAFGKHGCPN Trigger: GTTTGGACATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR GCA 90 bp | CTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCCCTTCTCAGAAAGTTTaGTCGGTTTTGGAAATTCCC | + |
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Preference number: 2 (lower is better) Translates to: LIRKNEQQTSKPLFTLQIPSQKV*SVLEIP Trigger: GGGAATTTCCAAAACCGAGCAAACTTTCTGAGAAGG...GATCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCAAGTTTGCTCGGTTTTaGAAATTCCCCAAGGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LIRKNEQQTSKPLFTLQIKFARF*KFPKVT Trigger: AGTCACCTTGGGGAATTTCCAAAACCGAGCAAACTT...GATCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR CAA 90 bp | ATGAAAAGTACAGGAGTCTCATATTTCAGACCAAGGATTCAATCGTaGGCTGTTCGCTTTGGCAAGCCTGTTCAATGCATTTGGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: MKSTGVSYFRPRIQS*AVRFGKPVQCIWKT Trigger: TGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGAGACTCCTGTACTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | GCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTaGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: AAPHPHQPAHHF*EKSEVSLPSSV Trigger: CACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR GCA 72 bp | TCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTaGCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGRSPRSPSPHQ*LVIRSSSAFLP Trigger: TGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCTCCGTCTTCAGCCTTTaGATGGAGGCCAAGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: LPSSVPGYPEQFSLPARLSVFSL*MEAKTR Trigger: TCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGA...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR GCA 72 bp | ATGTCCAAACTCCACAGGCCTAGCTTCAGCCATCAGTaGAGATTCCCAGCCCGAGGAAATCCCAGAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: MSKLHRPSFSHQ*RFPARGNPRAV Trigger: AACAGCTCTGGGATTTCCTCGGGCTGGGAATCTGCACTGATGGCTGAAGCTAGGCCTGTGGAGTTTGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR TCA 72 bp | TCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTaGTGGAGGCCAAGACCAGATGGAATGCACAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SCQTPNPPSSAF*WRPRPDGMHKS Trigger: AGACTTGTGCATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR TCA 72 bp | ACTGTTCACGTTACAGATCCAGTCCAATGGAGAGCTTaGAAGCACAAGGCAGACCAGGCTGCTCCCCATCCT | + |
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Preference number: 3 (lower is better) Translates to: TVHVTDPVQWRA*KHKADQAAPHP Trigger: AGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTCCATTGGACTGGATCTGTAACGTGAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCTCCTTCTCAGAAAGTTaGCTCGGTTTTGGAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LPSSVPGYPEQFSLPARLSFSES*LGFGNS Trigger: GGAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGA...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAAAGTTTGCTCGGTTTaGGAAATTCCCCAAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PDSKPSVFSLLMEAKTRWKVCSV*EIPQGD Trigger: GTCACCTTGGGGAATTTCCAAAACCGAGCAAACTTT...CCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR TCA 72 bp | AAGGTGTCAGCTCCCTTGGAATTGGAGTTACAGTTATaGGCCACCATGTGGATGCTGGGCATCAAACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: KVSAPLELELQL*ATMWMLGIKPQ Trigger: CTGGGGTTTGATGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCAAGGGAGCTGACACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | CAGATCCAAACCAGTCCCCAGATGCTGAGTCCATTGTaGCTCTCCTCAAAGAACACTCTCTCAGGAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: QIQTSPQMLSPL*LSSKNTLSGVP Trigger: TGGAACTCCTGAGAGAGTGTTCTTTGAGGAGAGCCACAATGGACTCAGCATCTGGGGACTGGTTTGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGAAAGTTTGCTCGGTTTaGGAAATTCCCCAAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SSSAFLPDSKPSVFSLLMKVCSV*EIPQGD Trigger: GTCACCTTGGGGAATTTCCAAAACCGAGCAAACTTT...CATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR GCA 72 bp | TGGAATTGGAGTTACAGTTATGAGCCACCATGTGGATaGTGGGCATCAAACCCCAGTCTTCTGCAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WNWSYSYEPPCG*WASNPSLLQEQ Trigger: CTGCTCTTGCAGAAGACTGGGGTTTGATGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | ACAAAGGCCAGAAGAAGGTGTCAGCTCCCTTGGAATTaGAGTTACAGTTATGAGCCACCATGTGGATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TKARRRCQLPWN*SYSYEPPCGCW Trigger: CCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATTCCAAGGGAGCTGACACCTTCTTCTGGCCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR CAA 90 bp | GACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATAAAGTTTGCTCGGTTTaGGAAATTCCCCAAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: DSKPSVFSLLMEAKTRWNKVCSV*EIPQGD Trigger: GTCACCTTGGGGAATTTCCAAAACCGAGCAAACTTT...ATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGTCCTTCTCAGAAAGTTaGCTCGGTTTTGGAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: SSSAFLPDSKPSVFSLLMSFSES*LGFGNS Trigger: GGAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGA...CATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
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| 3UTR TCA 72 bp | CCCCAGTCTTCTGCAAGAGCAGTCAGTTCTCTTAACTaGTGGGCTATCTCTCCAGCACCACTCCCATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: PQSSARAVSSLN*WAISPAPLPFK Trigger: TTTAAATGGGAGTGGTGCTGGAGAGATAGCCCATCAGTTAAGAGAACTGACTGCTCTTGCAGAAGACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | TTGGCTGTTCGCTTTGGCAAGCCTGTTCAATGCATTTaGAAAACATGGATGTCCAAACTCCACAGGCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: LAVRFGKPVQCI*KTWMSKLHRPS Trigger: GCTAGGCCTGTGGAGTTTGGACATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | AATTGGAGTTACAGTTATGAGCCACCATGTGGATGCTaGGCATCAAACCCCAGTCTTCTGCAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: NWSYSYEPPCGC*ASNPSLLQEQS Trigger: TGACTGCTCTTGCAGAAGACTGGGGTTTGATGCCCAGCATCCACATGGTGGCTCATAACTGTAACTCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCCGTCTTCAGCCTTTaGATGGAGGCCAAGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: SSSAKTNNKQANHCSRYRSVFSL*MEAKTR Trigger: TCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGA...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| 3UTR GCA 72 bp | CAATCGTTGGCTGTTCGCTTTGGCAAGCCTGTTCAATaGATTTGGAAAACATGGATGTCCAAACTCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: QSLAVRFGKPVQ*IWKTWMSKLHR Trigger: CCTGTGGAGTTTGGACATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | CAGGAGTCTCATATTTCAGACCAAGGATTCAATCGTTaGCTGTTCGCTTTGGCAAGCCTGTTCAATGCATTT | + |
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Preference number: 3 (lower is better) Translates to: QESHISDQGFNR*LFALASLFNAF Trigger: AAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGAGACTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| 3UTR CCA 72 bp | TTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTTaGCAAGCCTGTTCAATGCATTTGGAAAACATGGAT | + |
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Preference number: 3 (lower is better) Translates to: FQTKDSIVGCSL*QACSMHLENMD Trigger: ATCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTGCCTGGTTATCCGGGCCTGGCAGGCCCTGTaGATAACCTACAGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSGRSPRSPSPHQCLVIRAWQAL*ITYRGQ Trigger: CTGGCCCCTGTAGGTTATCCACAGGGCCTGCCAGGC...CCGGATAACCAGGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR CCA 90 bp | ACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGGGAGAAGTCCGGAAGCAGCAGGAAGGTaGCACAGACGATCCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: TRLLPILTSPHTTSGRSPEAAGR*HRRSPQ Trigger: TTGTGGGGATCGTCTGTGCCACCTTCCTGCTGCTTC...CGGACTTCTCCCAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR GCA 90 bp | GCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGTCGTCCTGGACCACATaGAGCACAATGGTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AQGRPGCSPSSPARTPLLSSWTT*STMVFL Trigger: CAGGAAAACCATTGTGCTGCATGTGGTCCAGGACGA...CAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR CCA 90 bp | GCCCGCACACCACTTCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTGCCGCACAATGGTTTTCCTaGACTCCAGCTTTCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: ARTPLLGEVRGLPPLISAAQWFS*TPAFPR Trigger: ACGTGGGAAAGCTGGAGTCCAGGAAAACCATTGTGC...GGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGTGGTGTGCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR CCA 90 bp | GCCCGCACACCACTTCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTGCCCCAAACTGGATGCTTTaGGGGAAGAAGGCCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: ARTPLLGEVRGLPPLISAPNWML*GKKAKL Trigger: CAGTTTGGCCTTCTTCCCCCAAAGCATCCAGTTTGG...GGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGTGGTGTGCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR CCA 90 bp | ACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGGGAGAAGTCCGCCAAACTGGATGCTTTaGGGGAAGAAGGCCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: TRLLPILTSPHTTSGRSPPNWML*GKKAKL Trigger: CAGTTTGGCCTTCTTCCCCCAAAGCATCCAGTTTGG...CGGACTTCTCCCAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS-3UTR CCA 90 bp | ACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGGGAGAAGTCCGAAGAGCGGACCAAACTaGATGCTTTGGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLLPILTSPHTTSGRSPKSGPN*MLWGKK Trigger: CTTCTTCCCCCAAAGCATCCAGTTTGGTCCGCTCTT...CGGACTTCTCCCAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | GCCCGCACACCACTTCTGGGAGAAGTCCGAGGTCTCCCTCCCCTCATCAGTGCCACATCCCATCAAGACTaGTTCACCCACATGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTPLLGEVRGLPPLISATSHQD*FTHMHS Trigger: AGAGTGCATGTGGGTGAATCAGTCTTGATGGGATGT...GGCACTGATGAGGGGAGGGAGACCTCGGACTTCTCCCAGAAGTGGTGTGCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGCCTGGCAGGCCCTGTaGATAACCTACAGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFSLPARLQTLRLQPFDGAWQAL*ITYRGQ Trigger: CTGGCCCCTGTAGGTTATCCACAGGGCCTGCCAGGC...TCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCGAAGCAGCAGGAAGGTaGCACAGACGATCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSVPGYPEQFSLPARLEAAGR*HRRSPQ Trigger: TTGTGGGGATCGTCTGTGCCACCTTCCTGCTGCTTC...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | GACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATGTCCCCCACCAAATGTaGCCGGTTCTGGAAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSKPSVFSLLMEAKTRWNVPHQM*PVLEAP Trigger: GGGCGCTTCCAGAACCGGTCACATTTGGTGGGGGAC...ATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR GCA 90 bp | GGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGGCGGACCAAACTGGATaGTTTGGGGGAAGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYPEQFSLPARLQTLRLQADQTG*FGGRRP Trigger: TGGCCTTCTTCCCCCAAAGCATCCAGTTTGGTCCGC...CTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCAAGCGGCCCAGGCTCTaGAATTTTCCACTACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QCLVIRSSSAFLPDSKPSKRPRL*NFPLRM Trigger: CATGCGTAGTGGAAAATTCCAGAGCCTGGGCCGCTT...GGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCACTTCTGGGACTCCTTCACTGTTTaGAGTTTGATTGAGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HKADQAAPHPHQPAHHFWDSFTV*SLIEPS Trigger: TGATGGCTCAATCAAACTTCAAACAGTGAAGGAGTC...CCAGAAGTGGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGCCCGCACACCGTCTCCTCCTCAGTATaGCTTCCTGAAGAAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LESTRQTRLLPILTSPHTVSSSV*LPEENI Trigger: GATGTTTTCTTCAGGAAGCCATACTGAGGAGGAGAC...GGTGTGCGGGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCACAATGATCACCAGCTaGTTTCCATTCAGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSVPGYPEQFSLPARLTMITS*FPFRMP Trigger: GGGCATCCTGAATGGAAATCAGCTGGTGATCATTGT...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCCAATGGAGAGCTTGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCCCCACATGCAGCACAATaGTTTTCCTGGACTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPMESLKAQGRPGCSPSPHAAQ*FSWTPA Trigger: AGCTGGAGTCCAGGAAAACCATTGTGCTGCATGTGG...GGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTCCATTGGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAGAGCAGCTCTTCTaGGGAAATGGGAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSVPGYPEQFSLPARLQEQLF*GNGNHS Trigger: AGAATGGTTCCCATTTCCCCAGAAGAGCTGCTCTTG...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| 3UTR CAA 72 bp | CACTGTTCACGTTACAGATCCAGTCCAATGGAGAGCTaGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HCSRYRSSPMES*KAQGRPGCSPS Trigger: GGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTCCATTGGACTGGATCTGTAACGTGAACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTGGGGATGGTTTGGCTaGAATGTGACTTCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLVIRSSSAFLPDSKPSVWGWFG*NVTSLF Trigger: GAAAAGTGAAGTCACATTTCAGCCAAACCATCCCCA...GACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGAAGAGCGGACCAAACTaGATGCTTTGGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLQTLRLQPFDGGQDQMKSGPN*MLWGKK Trigger: CTTCTTCCCCCAAAGCATCCAGTTTGGTCCGCTCTT...CATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| 3UTR CAA 72 bp | CCCCAGATCCAAACCAGTCCCCAGATGCTGAGTCCATaGTGGCTCTCCTCAAAGAACACTCTCTCAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIQTSPQMLSP*WLSSKNTLSGV Trigger: AACTCCTGAGAGAGTGTTCTTTGAGGAGAGCCACAATGGACTCAGCATCTGGGGACTGGTTTGGATCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR TCA 90 bp | TCATATTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTTGGCAAGCCTGTTGTCCCCCACCAAATGTaGCCGGTTCTGGAAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYFRPRIQSLAVRFGKPVVPHQM*PVLEAP Trigger: GGGCGCTTCCAGAACCGGTCACATTTGGTGGGGGAC...AACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCTCACTGTTTGAAGTTTaGTTGAGCCATCATTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVIRSSSAFLPDSKPSVFSLFEV*LSHHCG Trigger: CCCGCAATGATGGCTCAATCAAACTTCAAACAGTGA...GAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | ATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTCACTGTTTGAAGTTTaGTTGAGCCATCATTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSSSAFLPDSKPSVFSLSLFEV*LSHHCG Trigger: CCCGCAATGATGGCTCAATCAAACTTCAAACAGTGA...AAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACACAATGATCACCAGCTaGTTTCCATTCAGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LISAWLSGAVQPSCQTPNTMITS*FPFRMP Trigger: GGGCATCCTGAATGGAAATCAGCTGGTGATCATTGT...GTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTAGACGATCCCCACAATaGTCACCAGCTGATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISAWLSGAVQPSCQTPNPRRSPQ*SPADFH Trigger: ATGGAAATCAGCTGGTGATCATTGTGGGGATCGTCT...AGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR GCA 90 bp | CTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACGATTTCCATTCAGGATaGCCTGCTGACCCTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISAWLSGAVQPSCQTPNDFHSG*PADPYQ Trigger: CTGATAAGGGTCAGCAGGGCATCCTGAATGGAAATC...GTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR GCA 90 bp | CTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACTCATGGTCATGTAGGTaGCCTCTGACTCTCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LISAWLSGAVQPSCQTPNSWSCR*PLTLHL Trigger: TAAGTGGAGAGTCAGAGGGCACCTACATGACCATGA...GTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCCCTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTACATCCAGTTTACTTTaGTCACCCGTTTCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVSLPSSVPGYPEQFSLPTSSLL*SPVSLL Trigger: CAGAAGAGAAACGGGTGACCAAAGTAAACTGGATGT...AGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGCCACATGCAGCACAATaGTTTTCCTGGACTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSAFLPDSKPSVFSLLMPHAAQ*FSWTPA Trigger: AGCTGGAGTCCAGGAAAACCATTGTGCTGCATGTGG...CATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGCCATGCTCTCATTTTTaGGGCGGATTTCACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSAFLPDSKPSVFSLLMPCSHF*GGFHRC Trigger: ACACCTGTGAAATCCGCCTCAAAAATGAGAGCATGG...CATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCCCTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGAGTTGGAGGAGTTGGTaGAATTGTCCTTTGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHQCLVIRSSSAFLSWRSW*NCPLKF Trigger: GAATTTCAAAGGACAATTTCACCAACTCCTCCAACT...CAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCCTTCCATCTCTTTCTaGTTCTTGGAAGGAACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSVPGYPEQFSLPARLPSISF*FLEGTK Trigger: TTTAGTTCCTTCCAAGAATCAGAAAGAGATGGAAGG...GAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATTCGTCCTGGACCACATaGAGCACAATGGTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKPSVFSLLMEAKTRWNSSWTT*STMVFL Trigger: CAGGAAAACCATTGTGCTGCATGTGGTCCAGGACGA...ATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATAAGAGCGGACCAAACTaGATGCTTTGGGGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKPSVFSLLMEAKTRWNKSGPN*MLWGKK Trigger: CTTCTTCCCCCAAAGCATCCAGTTTGGTCCGCTCTT...ATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS-3UTR TCA 90 bp | CTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCTCAGTATGGCTTCCTaGAGAAAACATCCAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LISAWLSGAVQPSCQTPNLSMAS*RKHPVY Trigger: GTAAACTGGATGTTTTCTTCAGGAAGCCATACTGAG...GTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | TGTATGTCCATGTACCTTGCACATGCAGGGACCACAAAGGCCAGAAGAAGGTGTCCATGCTCTCATTTTTaGGGCGGATTTCACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CMSMYLAHAGTTKARRRCPCSHF*GGFHRC Trigger: ACACCTGTGAAATCCGCCTCAAAAATGAGAGCATGG...ACACCTTCTTCTGGCCTTTGTGGTCCCTGCATGTGCAAGGTACATGGACATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATGCACAAGTCCTCAGTATGGCTTCCTaGAGAAAACATCCAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSVFSLLMEAKTRWNAQVLSMAS*RKHPVY Trigger: GTAAACTGGATGTTTTCTTCAGGAAGCCATACTGAG...GACTTGTGCATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGGGTTTGGCTGAAATGTaGCTTCACTTTTCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDSKPSVFSLLMEAKTRWGLAEM*LHFSVF Trigger: GAAAACAGAAAAGTGAAGTCACATTTCAGCCAAACC...CCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS-3UTR GCA 90 bp | TCATATTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTTGGCAAGCCTGTTGCGGACCAAACTGGATaGTTTGGGGGAAGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYFRPRIQSLAVRFGKPVADQTG*FGGRRP Trigger: TGGCCTTCTTCCCCCAAAGCATCCAGTTTGGTCCGC...AACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGCCTTTTGATGGAATTCTGGGGATGGTTTaGCTGAAATGTGACTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QFSLPARLQTLRLQPFDGILGMV*LKCDFT Trigger: AGTGAAGTCACATTTCAGCCAAACCATCCCCAGAAT...TCCATCAAAAGGCTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCGCGGACCAAACTGGATaGTTTGGGGGAAGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKESLLLLRKFARFWKFADQTG*FGGRRP Trigger: TGGCCTTCTTCCCCCAAAGCATCCAGTTTGGTCCGC...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGAAAGCGGCCCAGGCTCTaGAATTTTCCACTACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKTNNKQANHCSRYRKRPRL*NFPLRM Trigger: CATGCGTAGTGGAAAATTCCAGAGCCTGGGCCGCTT...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGAGCACAATGGTTTTCCTaGACTCCAGCTTTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKTNNKQANHCSRYRAQWFS*TPAFPR Trigger: ACGTGGGAAAGCTGGAGTCCAGGAAAACCATTGTGC...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGAAGACGATCCCCACAATaGTCACCAGCTGATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKTNNKQANHCSRYRRRSPQ*SPADFH Trigger: ATGGAAATCAGCTGGTGATCATTGTGGGGATCGTCT...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCCCAAACTGGATGCTTTaGGGGAAGAAGGCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKESLLLLRKFARFWKFPNWML*GKKAKL Trigger: CAGTTTGGCCTTCTTCCCCCAAAGCATCCAGTTTGG...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| 3UTR CAA 72 bp | ACAGGAGTCTCATATTTCAGACCAAGGATTCAATCGTaGGCTGTTCGCTTTGGCAAGCCTGTTCAATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TGVSYFRPRIQS*AVRFGKPVQCI Trigger: AATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAATATGAGACTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCAGCCATAGAACTTACTaGGATCACACAGGACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQKESLLLLRKFARFWKFSHRTY*DHTGPF Trigger: GAAGGGTCCTGTGTGATCTCAGTAAGTTCTATGGCT...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCGATTTCCATTCAGGATaGCCTGCTGACCCTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQKESLLLLRKFARFWKFDFHSG*PADPYQ Trigger: CTGATAAGGGTCAGCAGGGCATCCTGAATGGAAATC...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| 3UTR CAA 72 bp | ATTTCAGACCAAGGATTCAATCGTTGGCTGTTCGCTTaGGCAAGCCTGTTCAATGCATTTGGAAAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISDQGFNRWLFA*ASLFNAFGKHG Trigger: TCCATGTTTTCCAAATGCATTGAACAGGCTTGCCAAAGCGAACAGCCAACGATTGAATCCTTGGTCTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050020.8 |
||
| CDS-3UTR TCA 90 bp | CTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCGACTCCTTCACTGTTTaGAGTTTGATTGAGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRKNEQQTSKPLFTLQIDSFTV*SLIEPS Trigger: TGATGGCTCAATCAAACTTCAAACAGTGAAGGAGTC...GATCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCATAGAACATCTCATCTaGGTTGTATCACCTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HQKESLLLLRKFARFWKFIEHLI*VVSPTR Trigger: CCGAGTAGGTGATACAACTCAGATGAGATGTTCTAT...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGTGTGTCTCTTAGTAGCTCATCCGCAAAAACGAACAACAAACAAGCAAATAGAACATCTCATCTaGGTTGTATCACCTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVCLLVAHPQKRTTNKQIEHLI*VVSPTR Trigger: CCGAGTAGGTGATACAACTCAGATGAGATGTTCTAT...TTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCTACTAAGAGACACACAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGAAGTTGGAGGAGTTGGTaGAATTGTCCTTTGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKTNNKQANHCSRYRSWRSW*NCPLKF Trigger: GAATTTCAAAGGACAATTTCACCAACTCCTCCAACT...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCCAGTCCAATACATCCAGTTTACTTTaGTCACCCGTTTCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNEQQTSKPLFTLQIQSNTSSLL*SPVSLL Trigger: CAGAAGAGAAACGGGTGACCAAAGTAAACTGGATGT...ATTGGACTGGATCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CCA 90 bp | CACTCTCAGCTGAGGGGAGGAAACGGTCAAGCCTGGCAGGCCCTGTaGATAACCTACAGGGGCCAGGATTACTGGAATCACAATCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSQLRGGNGQAWQAL*ITYRGQDYWNHNQF Trigger: AAACTGATTGTGATTCCAGTAATCCTGGCCCCTGTAGGTTATCCACAGGGCCTGCCAGGCTTGACCGTTTCCTCCCCTCAGCTGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS TCA 90 bp | TCAAAACCGGAAGCAGCAGGAAGGTGGCACAGACGATCCCCACAATaGTCACCAGCTGATTTCCATTCAGGATGCCCTGCTGACCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SKPEAAGRWHRRSPQ*SPADFHSGCPADPY Trigger: ATAAGGGTCAGCAGGGCATCCTGAATGGAAATCAGCTGGTGATCATTGTGGGGATCGTCTGTGCCACCTTCCTGCTGCTTCCGGTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS GCA 90 bp | ATGCTTTGGGGGAAGAAGGCCAAACTGGATTCATGGTCATGTAGGTaGCCTCTGACTCTCCACTTATTCCTCTCTCTGTCGTCTCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MLWGKKAKLDSWSCR*PLTLHLFLSLSSPT Trigger: CGTGGGAGACGACAGAGAGAGGAATAAGTGGAGAGTCAGAGGGCACCTACATGACCATGAATCCAGTTTGGCCTTCTTCCCCCAAAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS CCA 90 bp | GGACCAAACTGGATGCTTTGGGGGAAGAAGGCCAAACTGGATTCATaGTCATGTAGGTGCCCTCTGACTCTCCACTTATTCCTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPNWMLWGKKAKLDS*SCRCPLTLHLFLSL Trigger: CAGAGAGAGGAATAAGTGGAGAGTCAGAGGGCACCTACATGACCATGAATCCAGTTTGGCCTTCTTCCCCCAAAGCATCCAGTTTGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGGAGAGCTTGAAAGCACAAGGCAGACCAGGCTGCTCCCCATCCTCACCAGAGGAGTTGGTGAAATaGTCCTTTGAAATTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PMESLKAQGRPGCSPSSPEELVK*SFEIRP Trigger: AGGACGAATTTCAAAGGACAATTTCACCAACTCCTC...TGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTCTCCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | GGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTCCGTCTTCAGGGATTAATCTTCTCTTaGTTCTCCAGGCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GYPEQFSLPARLQTLRLQGLIFS*FSRLFT Trigger: TGTGAAGAGCCTGGAGAACAAAGAGAAGATTAATCC...CTGAAGACGGAGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS TCA 90 bp | GCACCCACAGTTCCACGGGCTTTTTCATCACCATGCTCTCATTTTTaGGGCGGATTTCACAGGTGTAGATTCCCTCATCGGCCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: APTVPRAFSSPCSHF*GGFHRCRFPHRPSE Trigger: TTCAGAAGGCCGATGAGGGAATCTACACCTGTGAAATCCGCCTCAAAAATGAGAGCATGGTGATGAAAAAGCCCGTGGAACTGTGGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000216426.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTCCCTCCCCTCATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGGAGCTCTTATTCCACTaGGCTTTCTTCACAATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSPSPHQCLVIRSSSAFLELLFH*AFFTIN Trigger: ATTAATTGTGAAGAAAGCCAAGTGGAATAAGAGCTC...CAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGATGAGGGGAGGGAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCCGTCTTCAGCCTTTTGATGGAGGCCAAGACCAGATGGAATGCACAAGTCGGATTAATCTTCTCTTaGTTCTCCAGGCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PSVFSLLMEAKTRWNAQVGLIFS*FSRLFT Trigger: TGTGAAGAGCCTGGAGAACAAAGAGAAGATTAATCC...GACTTGTGCATTCCATCTGGTCTTGGCCTCCATCAAAAGGCTGAAGACGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS TCA 90 bp | TCCATTCAGGATGCCCTGCTGACCCTTATCAGTTGGAGGAGTTGGTaGAATTGTCCTTTGAAATTCGTCCTGGACCACATGCAGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SIQDALLTLISWRSW*NCPLKFVLDHMQHN Trigger: ATTGTGCTGCATGTGGTCCAGGACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGGGCATCCTGAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS GCA 90 bp | GCAGCACAATGGTTTTCCTGGACTCCAGCTTTCCCACGTAGATGCTaGAAGTGTAGATTCCTTGGTCAGACTCCTTCACTGTTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAQWFSWTPAFPRRC*KCRFLGQTPSLFEV Trigger: AACTTCAAACAGTGAAGGAGTCTGACCAAGGAATCTACACTTGCAGCATCTACGTGGGAAAGCTGGAGTCCAGGAAAACCATTGTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS GCA 90 bp | CATGCAGCACAATGGTTTTCCTGGACTCCAGCTTTCCCACGTAGATaGTGCAAGTGTAGATTCCTTGGTCAGACTCCTTCACTGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HAAQWFSWTPAFPRR*CKCRFLGQTPSLFE Trigger: TTCAAACAGTGAAGGAGTCTGACCAAGGAATCTACACTTGCAGCATCTACGTGGGAAAGCTGGAGTCCAGGAAAACCATTGTGCTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CCA 90 bp | TCCTTTGAAATTCGTCCTGGACCACATGCAGCACAATGGTTTTCCTaGACTCCAGCTTTCCCACGTAGATGCTGCAAGTGTAGATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFEIRPGPHAAQWFS*TPAFPRRCCKCRFL Trigger: AAGGAATCTACACTTGCAGCATCTACGTGGGAAAGCTGGAGTCCAGGAAAACCATTGTGCTGCATGTGGTCCAGGACGAATTTCAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGTGCCTGGTTATCCGGAGCAGTTCAGCCTTCCTGCCAGACTCCAAACCCTGAGCTCTTATTCCACTaGGCTTTCTTCACAATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISAWLSGAVQPSCQTPNPELLFH*AFFTIN Trigger: ATTAATTGTGAAGAAAGCCAAGTGGAATAAGAGCTC...AGGGTTTGGAGTCTGGCAGGAAGGCTGAACTGCTCCGGATAACCAGGCACTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS TCA 90 bp | AGTGTAGATTCCTTGGTCAGACTCCTTCACTGTTTGAAGTTTGATTaGGCCATCATTGCGGGAGATGTCACCTGTCAGGTCTACACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVDSLVRLLHCLKFD*AIIAGDVTCQVYTV Trigger: AACCGTGTAGACCTGACAGGTGACATCTCCCGCAATGATGGCTCAATCAAACTTCAAACAGTGAAGGAGTCTGACCAAGGAATCTACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCGCTGACCCTTATCAGTaGGAGGAGTTGGTGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: HQKESLLLLRKFARFWKFADPYQ*EELVKL Trigger: CAATTTCACCAACTCCTCCAACTGATAAGGGTCAGC...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGAGGATTAATCTTCTCTTaGTTCTCCAGGCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSAKTNNKQANHCSRYRGLIFS*FSRLFT Trigger: TGTGAAGAGCCTGGAGAACAAAGAGAAGATTAATCC...TCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | CATCAAAAAGAGTCTCTCCTCCTTCTCAGAAAGTTTGCTCGGTTTTGGAAATTCGAGGAGTTGGTGAAATaGTCCTTTGAAATTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HQKESLLLLRKFARFWKFEELVK*SFEIRP Trigger: AGGACGAATTTCAAAGGACAATTTCACCAACTCCTC...GAATTTCCAAAACCGAGCAAACTTTCTGAGAAGGAGGAGAGACTCTTTTTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | CTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTGTTCACGTTACAGATCTATCAGTTGGAGGAGTaGGTGAAATTGTCCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LIRKNEQQTSKPLFTLQIYQLEE*VKLSFE Trigger: TTCAAAGGACAATTTCACCAACTCCTCCAACTGATA...GATCTGTAACGTGAACAGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCTCTTAGTAGCTCATCCGCAAAAACGAACAACAAACAAGCAAACCACTTATCAGTTGGAGGAGTaGGTGAAATTGTCCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCLLVAHPQKRTTNKQTTYQLEE*VKLSFE Trigger: TTCAAAGGACAATTTCACCAACTCCTCCAACTGATA...AGTGGTTTGCTTGTTTGTTGTTCGTTTTTGCGGATGAGCTACTAAGAGACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CCA 72 bp | ATGCACTCTCAGCTGAGGGGAGGAAACGGTCAAGCCTaGCAGGCCCTGTGGATAACCTACAGGGGCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: MHSQLRGGNGQA*QALWITYRGQD Trigger: ATCCTGGCCCCTGTAGGTTATCCACAGGGCCTGCCAGGCTTGACCGTTTCCTCCCCTCAGCTGAGAGTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CCA 72 bp | CTGAGGGGAGGAAACGGTCAAGCCTGGCAGGCCCTGTaGATAACCTACAGGGGCCAGGATTACTGGAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRGGNGQAWQAL*ITYRGQDYWNH Trigger: GTGATTCCAGTAATCCTGGCCCCTGTAGGTTATCCACAGGGCCTGCCAGGCTTGACCGTTTCCTCCCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS GCA 72 bp | CATTGCGGGAGATGTCACCTGTCAGGTCTACACGGTTaGGGAAGCGGCCCAGGCTCTGGAATTTTCCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: HCGRCHLSGLHG*GSGPGSGIFHY Trigger: GTAGTGGAAAATTCCAGAGCCTGGGCCGCTTCCGCAACCGTGTAGACCTGACAGGTGACATCTCCCGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CAA 90 bp | ATTGAGCCATCATTGCGGGAGATGTCACCTGTCAGGTCTACACGGTaGCGGAAGCGGCCCAGGCTCTGGAATTTTCCACTACGCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IEPSLREMSPVRSTR*RKRPRLWNFPLRML Trigger: CAACATGCGTAGTGGAAAATTCCAGAGCCTGGGCCGCTTCCGCAACCGTGTAGACCTGACAGGTGACATCTCCCGCAATGATGGCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS TCA 72 bp | AGGCCAAACTGGATTCATGGTCATGTAGGTGCCCTCTaGCTCTCCACTTATTCCTCTCTCTGTCGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPNWIHGHVGAL*LSTYSSLCRLP Trigger: TGGGAGACGACAGAGAGAGGAATAAGTGGAGAGTCAGAGGGCACCTACATGACCATGAATCCAGTTTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS GCA 72 bp | GGGAAGAAGGCCAAACTGGATTCATGGTCATGTAGGTaGCCTCTGACTCTCCACTTATTCCTCTCTCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GKKAKLDSWSCR*PLTLHLFLSLS Trigger: CGACAGAGAGAGGAATAAGTGGAGAGTCAGAGGGCACCTACATGACCATGAATCCAGTTTGGCCTTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000217074.2 |
||
| CDS TCA 72 bp | GTTCCACGGGCTTTTTCATCACCATGCTCTCATTTTTaGGGCGGATTTCACAGGTGTAGATTCCCTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: VPRAFSSPCSHF*GGFHRCRFPHR Trigger: CCGATGAGGGAATCTACACCTGTGAAATCCGCCTCAAAAATGAGAGCATGGTGATGAAAAAGCCCGTGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000216426.2 |
||
| CDS TCA 72 bp | GATGCCCTGCTGACCCTTATCAGTTGGAGGAGTTGGTaGAATTGTCCTTTGAAATTCGTCCTGGACCACATG | + |
|
Preference number: 6 (lower is better) Translates to: DALLTLISWRSW*NCPLKFVLDHM Trigger: CATGTGGTCCAGGACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGGGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS GCA 72 bp | CAATGGTTTTCCTGGACTCCAGCTTTCCCACGTAGATaGTGCAAGTGTAGATTCCTTGGTCAGACTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QWFSWTPAFPRR*CKCRFLGQTPS Trigger: TGAAGGAGTCTGACCAAGGAATCTACACTTGCAGCATCTACGTGGGAAAGCTGGAGTCCAGGAAAACCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CAA 72 bp | ACAGGTGTAGATTCCCTCATCGGCCTTCTGAACATCTaGGAGCAGGAGAGAACCATCATTATGGAAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TGVDSLIGLLNI*EQERTIIMEGV Trigger: GACACCTTCCATAATGATGGTTCTCTCCTGCTCCAAGATGTTCAGAAGGCCGATGAGGGAATCTACACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000216426.2 |
||
| CDS CAA 72 bp | CCTGCTGACCCTTATCAGTTGGAGGAGTTGGTGAAATaGTCCTTTGAAATTCGTCCTGGACCACATGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PADPYQLEELVK*SFEIRPGPHAA Trigger: TGCTGCATGTGGTCCAGGACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CAA 72 bp | TCAGGATGCCCTGCTGACCCTTATCAGTTGGAGGAGTaGGTGAAATTGTCCTTTGAAATTCGTCCTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SGCPADPYQLEE*VKLSFEIRPGP Trigger: TGGTCCAGGACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGGGCATCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS CAA 90 bp | TCACCAGCTGATTTCCATTCAGGATGCCCTGCTGACCCTTATCAGTaGGAGGAGTTGGTGAAATTGTCCTTTGAAATTCGTCCTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SPADFHSGCPADPYQ*EELVKLSFEIRPGP Trigger: TGGTCCAGGACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGGGCATCCTGAATGGAAATCAGCTGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS TCA 72 bp | GTTCTCCAGGCTCTTCACAGAAGCCATAGAACTTACTaGGATCACACAGGACCCTTCCATCTCTTTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VLQALHRSHRTY*DHTGPFHLFLI Trigger: AATCAGAAAGAGATGGAAGGGTCCTGTGTGATCTCAGTAAGTTCTATGGCTTCTGTGAAGAGCCTGGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS TCA 72 bp | ATAGCTCAAGACTGTCTCCTCCTCAGTATGGCTTCCTaGAGAAAACATCCAGTTTACTTTGGTCACCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: IAQDCLLLSMAS*RKHPVYFGHPF Trigger: AAACGGGTGACCAAAGTAAACTGGATGTTTTCTTCAGGAAGCCATACTGAGGAGGAGACAGTCTTGAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000216426.2 |
||
| CDS CAA 72 bp | GATTTCCATTCAGGATGCCCTGCTGACCCTTATCAGTaGGAGGAGTTGGTGAAATTGTCCTTTGAAATTCGT | + |
|
Preference number: 6 (lower is better) Translates to: DFHSGCPADPYQ*EELVKLSFEIR Trigger: ACGAATTTCAAAGGACAATTTCACCAACTCCTCCAACTGATAAGGGTCAGCAGGGCATCCTGAATGGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
||
| CDS TCA 72 bp | CTTACTGAGATCACACAGGACCCTTCCATCTCTTTCTaGTTCTTGGAAGGAACTAAATATGCAAGAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTEITQDPSISF*FLEGTKYARAA Trigger: AGCTGCTCTTGCATATTTAGTTCCTTCCAAGAATCAGAAAGAGATGGAAGGGTCCTGTGTGATCTCAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217074.2 |
||
| CDS CAA 72 bp | TCAGTATGGCTTCCTGAAGAAAACATCCAGTTTACTTaGGTCACCCGTTTCTCTTCTGTGCTCTGGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SVWLPEENIQFT*VTRFSSVLWIE Trigger: TTCTATCCAGAGCACAGAAGAGAAACGGGTGACCAAAGTAAACTGGATGTTTTCTTCAGGAAGCCATACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 ENSMUST00000216426.2 |
||
| CDS CAA 90 bp | AGGCTCTTCACAGAAGCCATAGAACTTACTGAGCTCTTATTCCACTaGGCTTTCTTCACAATTAATATCAAAACCGGAAGCAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLFTEAIELTELLFH*AFFTINIKTGSSRK Trigger: CTTCCTGCTGCTTCCGGTTTTGATATTAATTGTGAAGAAAGCCAAGTGGAATAAGAGCTCAGTAAGTTCTATGGCTTCTGTGAAGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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| CDS CAA 72 bp | ACAGAAGCCATAGAACTTACTGAGCTCTTATTCCACTaGGCTTTCTTCACAATTAATATCAAAACCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TEAIELTELLFH*AFFTINIKTGS Trigger: GCTTCCGGTTTTGATATTAATTGTGAAGAAAGCCAAGTGGAATAAGAGCTCAGTAAGTTCTATGGCTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050020.8 ENSMUST00000215880.2 |
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