Pregenerated sensors for JAM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053062Ensembl transcript IDs: ENSMUST00000098407.3, ENSMUST00000114195.8, ENSMUST00000231910.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGCAAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTaGAAGAGGAGGGAGATTTGGCACTCCCTCAACCCCACCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HCKASGHRRLFFTRS*KRREIWHSLNPTSA Trigger: GGCAGAGGTGGGGTTGAGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTTGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | CACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGATTTaGCACTCCCTCAACCCCACCTCTGCCATACACAAAACAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: HRRLFFTRSWKRREI*HSLNPTSAIHKTAS Trigger: ACTGGCTGTTTTGTGTATGGCAGAGGTGGGGTTGAGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR TCA 90 bp | AGTTTGACAAAGATAGGTTTGGGGACCATGGTGGATGGGGGTGGGTaGAGAAAGTGTGAGCTGTGGATCTGGTGGCTGTGTTCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SLTKIGLGTMVDGGG*RKCELWIWWLCSAP Trigger: AGGAGCTGAACACAGCCACCAGATCCACAGCTCACACTTTCTTCACCCACCCCCATCCACCATGGTCCCCAAACCTATCTTTGTCAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | CCTTGTTGGAGTAGGTGTGGCCTTGTTGGAGGAAGTGTGTCACTGTaGGGGTGGGTTTTGAGGTCACCCAGTATGACACATAGTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: PCWSRCGLVGGSVSL*GWVLRSPSMTHSFL Trigger: AAGGAAACTATGTGTCATACTGGGTGACCTCAAAACCCACCCCCACAGTGACACACTTCCTCCAACAAGGCCACACCTACTCCAACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR CCA 90 bp | TCAGGACCTGGAGTGACAGAAGTTTCTGAACCACCATGTAGATGCTaGGAAATGACCTTGGGACAAACTGGGTCATCTGCAGGAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: SGPGVTEVSEPPCRC*EMTLGQTGSSAGAS Trigger: TGATGCTCCTGCAGATGACCCAGTTTGTCCCAAGGTCATTTCCCAGCATCTACATGGTGGTTCAGAAACTTCTGTCACTCCAGGTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR CCA 90 bp | CTAGGCAACATTTACCCTGATTTCTTATACACCACAGGTGTTTGTTaGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTTACCT | + |
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Preference number: 1 (lower is better) Translates to: LGNIYPDFLYTTGVC*LPGARSLDLWAHLP Trigger: AGGTAAGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGGTGTATAAGAAATCAGGGTAAATGTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR GCA 90 bp | GATGTAGAACTCTTGGCTCCTTTTCCAGTACCATGTCTGCCTGGATaGTGTCATGCTTCCCAACATGATGATAAATGGACTGAACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: DVELLAPFPVPCLPG*CHASQHDDKWTEPL Trigger: CAGAGGTTCAGTCCATTTATCATCATGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTACTGGAAAAGGAGCCAAGAGTTCTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR TCA 90 bp | GCAAATCCTGAGAATCTGCCTTGCCTTTTGGGTGCAAAGCCAACTTaGCCATGTTCAAAGCTGATAGAGGGAGTAAATGACCTTTCATGC | + |
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Preference number: 1 (lower is better) Translates to: ANPENLPCLLGAKPT*PCSKLIEGVNDLSC Trigger: GCATGAAAGGTCATTTACTCCCTCTATCAGCTTTGAACATGGTCAAGTTGGCTTTGCACCCAAAAGGCAAGGCAGATTCTCAGGATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | CCCTGGGAATTTCCAATTCTGACACTAGCTGGTTGGTGGCCTTTGTaGATAACCAGTTCAGAAGACATTAGACCCATCTCATTTCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: PWEFPILTLAGWWPL*ITSSEDIRPISFQL Trigger: TAGCTGAAATGAGATGGGTCTAATGTCTTCTGAACTGGTTATCCACAAAGGCCACCAACCAGCTAGTGTCAGAATTGGAAATTCCCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR TCA 90 bp | TCAGCTATGGTTTCTCCTGTGCCTTTGCTGGATCAAGAGTCAAAATaGGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATGCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SAMVSPVPLLDQESK*ACSSTFALWGKCFS Trigger: AGAGAAGCATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | TTTTACCTGAATGTATGTATATGCCCCGAATGCATGGAATGCGAATaGAAGTCAGAAGAAGAGGGTAGAAGATCTTCAGGACCTGGAGTG | + |
|
Preference number: 1 (lower is better) Translates to: FYLNVCICPECMECE*KSEEEGRRSSGPGV Trigger: CACTCCAGGTCCTGAAGATCTTCTACCCTCTTCTTCTGACTTCCATTCGCATTCCATGCATTCGGGGCATATACATACATTCAGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR GCA 90 bp | GACATTAGACCCATCTCATTTCAGCTATGGTTTCTCCTGTGCCTTTaGTGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: DIRPISFQLWFLLCL*WIKSQNELVHLPLP Trigger: AGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGAAATGAGATGGGTCTAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR GCA 90 bp | TCAGAAGACATTAGACCCATCTCATTTCAGCTATGGTTTCTCCTGTaGCTTTGCTGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCT | + |
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Preference number: 1 (lower is better) Translates to: SEDIRPISFQLWFLL*LCWIKSQNELVHLP Trigger: AGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGAAATGAGATGGGTCTAATGTCTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR TCA 90 bp | TACCTGTACTCTACATTAAGTGGTTGTAACAAGAACCATGTGGGTTaGATTATGTACTGTCTCGTTCCTTGTAGCTTGCTAGCTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: YLYSTLSGCNKNHVG*IMYCLVPCSLLAQV Trigger: CACTTGAGCTAGCAAGCTACAAGGAACGAGACAGTACATAATTCAACCCACATGGTTCTTGTTACAACCACTTAATGTAGAGTACAGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | ATTAGACCCATCTCATTTCAGCTATGGTTTCTCCTGTGCCTTTGCTaGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCTTAT | + |
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Preference number: 1 (lower is better) Translates to: IRPISFQLWFLLCLC*IKSQNELVHLPLPY Trigger: ATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGAAATGAGATGGGTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CCA 90 bp | CAGATACTCTTAAATACCTTAGGGTTTATGAAGACCTGTACAACATaGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATGTCAGACATA | + |
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Preference number: 1 (lower is better) Translates to: QILLNTLGFMKTCTT*VFSQGFRLVEMSDI Trigger: TATGTCTGACATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATAAACCCTAAGGTATTTAAGAGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR TCA 90 bp | CCCAAGTTATTTAGAGGTAAGAAGAGGATTCTGGTAGGAATTTTGTaGACAGGGTTTCCATTCGTTAGAGTATTTCCTGAACACATAAGC | + |
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Preference number: 1 (lower is better) Translates to: PKLFRGKKRILVGIL*TGFPFVRVFPEHIS Trigger: GCTTATGTGTTCAGGAAATACTCTAACGAATGGAAACCCTGTTCACAAAATTCCTACCAGAATCCTCTTCTTACCTCTAAATAACTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR TCA 90 bp | CAAAAGGGCAGAATAAATTGTAAAGACAAACATAGTTCAGTTTGCTaGATAAGGCAACAAACAAAAAGTGGGTCCTGGGTTGGTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: QKGRINCKDKHSSVC*IRQQTKSGSWVGCV Trigger: TACACAACCAACCCAGGACCCACTTTTTGTTTGTTGCCTTATTCAGCAAACTGAACTATGTTTGTCTTTACAATTTATTCTGCCCTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGTGGGCATCGCCCCTGTaGCCAGATCAATACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KASGHRRLFFTRSWKRREWASPL*PDQYQA Trigger: TGCCTGGTATTGATCTGGTCACAGGGGCGATGCCCA...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGGCCTTATGGGGCAAATaGTTCTCTCCCCTGTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KASGHRRLFFTRSWKRREALWGK*FSPLCP Trigger: GGGGCACAGGGGAGAGAAGCATTTGCCCCATAAGGC...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGATTTGGCACTCCCTCCTCACAGCAGCAGGTaGAAGGGAGGGAGGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PQALLHKVLEEEGDLALPPHSSR*KGGRSF Trigger: GAAACTCCTCCCTCCCTTCCACCTGCTGCTGTGAGG...AGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CAA 90 bp | ATGCTATGTGGGCCTGAAGAGGCATGTGGGCCTGAAGAGGCATCCTaGAGAGCTGTCTGCTTGGCACTGCAGAAGGATAGCAGTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: MLCGPEEACGPEEAS*RAVCLALQKDSSPP Trigger: AGGAGGACTGCTATCCTTCTGCAGTGCCAAGCAGACAGCTCTCAAGGATGCCTCTTCAGGCCCACATGCCTCTTCAGGCCCACATAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGACCACAGGTGTTTGTTaGCTACCAGGGGCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KASGHRRLFFTRSWKRRETTGVC*LPGARS Trigger: GCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGGT...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR CAA 90 bp | TCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGATTaGGCACTCCCTCAACCCCACCTCTGCCATACACAAAACAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SPQALLHKVLEEEGD*ALPQPHLCHTQNSQ Trigger: CTGGCTGTTTTGTGTATGGCAGAGGTGGGGTTGAGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGCGTAAGACCCAGCCCTaGGATATAGAGACACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: KASGHRRLFFTRSWKRRERKTQP*DIETQD Trigger: GTCCTGTGTCTCTATATCCCAGGGCTGGGTCTTACG...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGCCTGAGAATCTGCCTTaGCTTTTGGGTGCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KASGHRRLFFTRSWKRREPENLP*LLGAKP Trigger: TGGCTTTGCACCCAAAAGGCAAGGCAGATTCTCAGG...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTCCTTTTCCAGTACCATGTCTGCCTGGATGCTGTCATGCTTCCCAACATATGCCCCGAATGCATaGAATGCGAATGGAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LGSFSSTMSAWMLSCFPTYAPNA*NANGSQ Trigger: CTGACTTCCATTCGCATTCCATGCATTCGGGGCATA...TGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTACTGGAAAAGGAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGTGGGTTTTGAGGTCACCCAGTATGACACATAGTTTCCTTCTACTCCCTAGTACCATGTCTGCCTaGATGCTGTCATGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: WGWVLRSPSMTHSFLLLPSTMSA*MLSCFP Trigger: TGGGAAGCATGACAGCATCCAGGCAGACATGGTACT...AGGGAGTAGAAGGAAACTATGTGTCATACTGGGTGACCTCAAAACCCACCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAAATTCAGGACTGAAGATGGTAGGCAGAATCCTGGCAGTCCCACAACATGACCTTGGGACAAACTaGGTCATCTGCAGGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: LENSGLKMVGRILAVPQHDLGTN*VICRSI Trigger: GATGCTCCTGCAGATGACCCAGTTTGTCCCAAGGTC...ATGTTGTGGGACTGCCAGGATTCTGCCTACCATCTTCAGTCCTGAATTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGTGTCACTGTGGGGGTGGGTTTTGAGGTCACCCAGTATGACACATAGTCCAGCCCCAATTAGATaGTTTCCCTTACAAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSVSLWGWVLRSPSMTHSPAPIR*FPLQRV Trigger: AACTCTTTGTAAGGGAAAGCATCTAATTGGGGCTGG...ACTATGTGTCATACTGGGTGACCTCAAAACCCACCCCCACAGTGACACACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR GCA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACATCCTTGAGAGCTGTCTaGTTGGCACTGCAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: AIRIQRQNSQLENGRSPTSLRAV*LALQKD Trigger: ATCCTTCTGCAGTGCCAAGCAGACAGCTCTCAAGGA...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGAGTGTTTGGAACTCAGGAGCAGAACAATAAGATCTGAATATGGAGTGACTGTGTCACTGTGGGGGTaGGTTTTGAGGTCACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RECLELRSRTIRSEYGVTVSLWG*VLRSPS Trigger: ACTGGGTGACCTCAAAACCCACCCCCACAGTGACAC...AGTCACTCCATATTCAGATCTTATTGTTCTGCTCCTGAGTTCCAAACACTCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTTATATTCTTGCTTCTTaGATTAGCCTTACAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQVFVGYQGQGAWICGHTYILAS*ISLTVS Trigger: ACTGACTGTAAGGCTAATCCAAGAAGCAAGAATATA...AGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR TCA 90 bp | TATGAAGACCTGTACAACATGGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATGACTGGGTTTCCTGCTaGGCCCTGGGAATTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: YEDLYNMGLFSGFQVGRDDWVSC*ALGISN Trigger: ATTGGAAATTCCCAGGGCTCAGCAGGAAACCCAGTC...ATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCATAGAAAGTGGCATTATTAAGAGTTGTGGCCTTGTTGGAGTAGGTGTGCCATGTCTGCCTGGATaGTGTCATGCTTCCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: CPIESGIIKSCGLVGVGVPCLPG*CHASQH Trigger: ATGTTGGGAAGCATGACAGCATCCAGGCAGACATGG...CACACCTACTCCAACAAGGCCACAACTCTTAATAATGCCACTTTCTATGGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGACAAAGATAGGTTTGGGGACCATGGTGGATGGGGGTGGGTGAAGAAACTGGTAGGAATTTTGTaGACAGGGTTTCCATTCGTT | + |
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Preference number: 2 (lower is better) Translates to: KFDKDRFGDHGGWGWVKKLVGIL*TGFPFV Trigger: AACGAATGGAAACCCTGTTCACAAAATTCCTACCAG...TTTCTTCACCCACCCCCATCCACCATGGTCCCCAAACCTATCTTTGTCAAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGACAAAGATAGGTTTGGGGACCATGGTGGATGGGGGTGGGTGAAGAAATATCCCGACCAAAAATaGGCTGGATCTAGTTACAAC | + |
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Preference number: 2 (lower is better) Translates to: KFDKDRFGDHGGWGWVKKYPDQK*AGSSYN Trigger: GTTGTAACTAGATCCAGCTCATTTTTGGTCGGGATA...TTTCTTCACCCACCCCCATCCACCATGGTCCCCAAACCTATCTTTGTCAAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTGACAAAGATAGGTTTGGGGACCATGGTGGATGGGGGTGGGTGAAGAAAGACAACTGGTTTTGGTaGAGCTCAAAACTGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: KFDKDRFGDHGGWGWVKKDNWFW*SSKLEF Trigger: GAATTCCAGTTTTGAGCTGCACCAAAACCAGTTGTC...TTTCTTCACCCACCCCCATCCACCATGGTCCCCAAACCTATCTTTGTCAAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATGCTTCTCTCCCCTGTGCACATAAGCCATTCTTaGATGGAGAGAACACATGGA | + |
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Preference number: 2 (lower is better) Translates to: MSLFIYLCLMGQMLLSPVHISHS*MERTHG Trigger: TCCATGTGTTCTCTCCATGCAAGAATGGCTTATGTG...CACAGGGGAGAGAAGCATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCATAGAAAGTGGCATTATTAAGAGTTGTGGCCTTGTTGGAGTAGGTGTGCCACCATGTAGATGCTaGGAAATGACCTTGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: CPIESGIIKSCGLVGVGVPPCRC*EMTLGQ Trigger: TTGTCCCAAGGTCATTTCCCAGCATCTACATGGTGG...CACACCTACTCCAACAAGGCCACAACTCTTAATAATGCCACTTTCTATGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGTGTCACTGTGGGGGTGGGTTTTGAGGTCACCCAGTATGACACATAGTCAACATGATGATAAATaGACTGAACCTCTGAACCTA | + |
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Preference number: 2 (lower is better) Translates to: GSVSLWGWVLRSPSMTHSQHDDK*TEPLNL Trigger: TAGGTTCAGAGGTTCAGTCCATTTATCATCATGTTG...ACTATGTGTCATACTGGGTGACCTCAAAACCCACCCCCACAGTGACACACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAAATTCAGGACTGAAGATGGTAGGCAGAATCCTGGCAGTCCCACAACATATAGAAATGTGGATATaGCCACACAACATGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LENSGLKMVGRILAVPQHIEMWI*PHNMVA Trigger: AGCCACCATGTTGTGTGGTCATATCCACATTTCTAT...ATGTTGTGGGACTGCCAGGATTCTGCCTACCATCTTCAGTCCTGAATTTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR TCA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACAAGGCAACATTTACCCTaGTTTCTTATACACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: AIRIQRQNSQLENGRSPTRQHLP*FLIHHR Trigger: CCTGTGGTGTATAAGAAATCAGGGTAAATGTTGCCT...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGACAAAGATAGGTTTGGGGACCATGGTGGATGGGGGTGGGTGAAGAAAGATCAAGAGTCAAAATaGGCTTGTTCATCTACCTTT | + |
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Preference number: 2 (lower is better) Translates to: KFDKDRFGDHGGWGWVKKDQESK*ACSSTF Trigger: AAAGGTAGATGAACAAGCTCATTTTGACTCTTGATC...TTTCTTCACCCACCCCCATCCACCATGGTCCCCAAACCTATCTTTGTCAAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCTGTGGATTAAGATGTAGAACTCTTGGCTCCTTTTCCAGTACCATGTCTCTGAATGTATGTATATaGCCCGAATGCATGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: TPCGLRCRTLGSFSSTMSLNVCI*PECMEC Trigger: GCATTCCATGCATTCGGGGCATATACATACATTCAG...AGACATGGTACTGGAAAAGGAGCCAAGAGTTCTACATCTTAATCCACAGGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| 3UTR-3UTR CCA 90 bp | GGACTCATGTGTCTGAACACTTGGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTTTCCAGACCCTAGCATaGACTTTTAAAATTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GLMCLNTWSPALDVFEEVFQTLA*TFKIQG Trigger: ACCCTGAATTTTAAAAGTCCATGCTAGGGTCTGGAA...AACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACACATGAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATGCTTCTCTCCCCTGTGATAACATGTGACAACTaGTTTTGGTGCAGCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: MSLFIYLCLMGQMLLSPVITCDN*FWCSSK Trigger: TTTTGAGCTGCACCAAAACCAGTTGTCACATGTTAT...CACAGGGGAGAGAAGCATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGAAGACCTGTACAACATGGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATTTTCCTGCTGAGCCCTaGGAATTTCCAATTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: YEDLYNMGLFSGFQVGRDFPAEP*EFPILT Trigger: TGTCAGAATTGGAAATTCCCAGGGCTCAGCAGGAAA...ATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATCAAAAAGGGTGTCTGTaGAGTTGTGTAGGCTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: WIKSQNELVHLPLPYGANQKGCL*SCVGSS Trigger: ACTAGAGCCTACACAACTCCACAGACACCCTTTTTG...ATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGCTGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCTTATGGGATTTCTTCATCACTTTaGAAGTGTAAGACACAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LCWIKSQNELVHLPLPYGISSSL*KCKTQS Trigger: ACTCTGTGTCTTACACTTGCAAAGTGATGAAGAAAT...CCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAGACAACTGGTTTTGGTaGAGCTCAAAACTGGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: RHKMPGCNLVMARTFCLKDNWFW*SSKLEF Trigger: GAATTCCAGTTTTGAGCTGCACCAAAACCAGTTGTC...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| 3UTR CAA 90 bp | GAAGTTAGACTTAATGGATTTCCCTTATTAAATATCCGTGAGTGTTaGGAACTCAGGAGCAGAACAATAAGATCTGAATATGGAGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: EVRLNGFPLLNIREC*ELRSRTIRSEYGVT Trigger: AGTCACTCCATATTCAGATCTTATTGTTCTGCTCCTGAGTTCCAAACACTCACGGATATTTAATAAGGGAAATCCATTAAGTCTAACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGATAACATGTGACAACTaGTTTTGGTGCAGCTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HKTSDELPLSYFFITLQVITCDN*FWCSSK Trigger: TTTTGAGCTGCACCAAAACCAGTTGTCACATGTTAT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAATTTCTTCATCACTTTaGAAGTGTAAGACACAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RHKMPGCNLVMARTFCLKISSSL*KCKTQS Trigger: ACTCTGTGTCTTACACTTGCAAAGTGATGAAGAAAT...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| 3UTR CCA 72 bp | GCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTaGAAGAGGAGGGAGATTTGGCACTCCCTCAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: ASGHRRLFFTRS*KRREIWHSLNP Trigger: GGGGTTGAGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR TCA 72 bp | GGCCTGAAGAGGCATGTGGGCCTGAAGAGGCATCCTTaGGAGCTGTCTGCTTGGCACTGCAGAAGGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLKRHVGLKRHP*ELSAWHCRRIA Trigger: TGCTATCCTTCTGCAGTGCCAAGCAGACAGCTCTCAAGGATGCCTCTTCAGGCCCACATGCCTCTTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGATTTGGCACTCCCTGTTTCTCCTGTGCCTTaGCTGGATCAAGAGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PQALLHKVLEEEGDLALPVSPVP*LDQESK Trigger: TTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAAC...AGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR TCA 72 bp | AGGCACTCTCTGACCACTTGCCCTGTTTGCAAATCCTaGGAATCTGCCTTGCCTTTTGGGTGCAAAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RHSLTTCPVCKS*ESALPFGCKAN Trigger: GTTGGCTTTGCACCCAAAAGGCAAGGCAGATTCTCAGGATTTGCAAACAGGGCAAGTGGTCAGAGAGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CCA 72 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTaGATCTGTGGGCACACTTACCTGTACTCTACATTA | + |
|
Preference number: 3 (lower is better) Translates to: PQVFVGYQGQGA*ICGHTYLYSTL Trigger: TAATGTAGAGTACAGGTAAGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR GCA 72 bp | GGGTCATCTGCAGGAGCATCAAATGCTCTTAACCACTaGTGGCCCATTTTTCCAGACCCTAGCATGGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: GSSAGASNALNH*WPIFPDPSMDF Trigger: AAAGTCCATGCTAGGGTCTGGAAAAATGGGCCAGCAGTGGTTAAGAGCATTTGATGCTCCTGCAGATGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGAACACTTGGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTGTGGAGACTGTAGGTGTGGCCTTGTaGGAGGAAGTGTGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLNTWSPALDVFEEVVETVGVAL*EEVCHC Trigger: ACAGTGACACACTTCCTCCAACAAGGCCACACCTAC...AGTCTCCACAACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR TCA 72 bp | CAGAAGAAGAGGGTAGAAGATCTTCAGGACCTGGAGTaGCAGAAGTTTCTGAACCACCATGTAGATGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QKKRVEDLQDLE*QKFLNHHVDAG Trigger: CCCAGCATCTACATGGTGGTTCAGAAACTTCTGTCACTCCAGGTCCTGAAGATCTTCTACCCTCTTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR CCA 72 bp | GGAGTGACAGAAGTTTCTGAACCACCATGTAGATGCTaGGAAATGACCTTGGGACAAACTGGGTCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GVTEVSEPPCRC*EMTLGQTGSSA Trigger: TGCAGATGACCCAGTTTGTCCCAAGGTCATTTCCCAGCATCTACATGGTGGTTCAGAAACTTCTGTCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACAGCTGGTTGGTGGCCTTaGTGGATAACCAGTTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AIRIQRQNSQLENGRSPTAGWWP*WITSSE Trigger: TTCTGAACTGGTTATCCACAAAGGCCACCAACCAGC...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACATCTGACACTAGCTGGTaGGTGGCCTTTGTGGATAAC | + |
|
Preference number: 3 (lower is better) Translates to: AIRIQRQNSQLENGRSPTSDTSW*VAFVDN Trigger: GTTATCCACAAAGGCCACCAACCAGCTAGTGTCAGA...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACTCATGTGTCTGAACACTTGGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTAGTGGGTGTGGTGGTTaGAATAGGAATGATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLMCLNTWSPALDVFEEVSGCGG*NRNDLH Trigger: GTGGAGATCATTCCTATTCAAACCACCACACCCACT...AACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACACATGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGACCTGTACAACATGGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATGCACTCTCTGACCACTaGCCCTGTTTGCAAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YEDLYNMGLFSGFQVGRDALSDH*PCLQIL Trigger: CAGGATTTGCAAACAGGGCAAGTGGTCAGAGAGTGC...ATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR GCA 72 bp | CTCTTGGCTCCTTTTCCAGTACCATGTCTGCCTGGATaGTGTCATGCTTCCCAACATGATGATAAATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LLAPFPVPCLPG*CHASQHDDKWT Trigger: AGTCCATTTATCATCATGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTACTGGAAAAGGAGCCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACACCCTTCATGCTGCTTTaGGTTCTGAGAAGTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AIRIQRQNSQLENGRSPTPFMLL*VLRSER Trigger: TCTTTCACTTCTCAGAACCAAAAGCAGCATGAAGGG...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CCA 72 bp | TATGGAGTGACTCATGGACTCATGTGTCTGAACACTTaGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YGVTHGLMCLNT*SPALDVFEEVV Trigger: CACAACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACACATGAGTCCATGAGTCACTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR CCA 72 bp | CCCTGGGAATTTCCAATTCTGACACTAGCTGGTTGGTaGCCTTTGTGGATAACCAGTTCAGAAGACATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PWEFPILTLAGW*PLWITSSEDIR Trigger: TCTAATGTCTTCTGAACTGGTTATCCACAAAGGCCACCAACCAGCTAGTGTCAGAATTGGAAATTCCCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGAACACTTGGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTGTGGAGACTAAAAGAAGGGTCTCATaGGGGAAATTGGGTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLNTWSPALDVFEEVVETKRRVS*GKLGLR Trigger: TCTAAGACCCAATTTCCCCAATGAGACCCTTCTTTT...AGTCTCCACAACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR TCA 72 bp | GTTTCTCCTGTGCCTTTGCTGGATCAAGAGTCAAAATaGGCTTGTTCATCTACCTTTGCCTTATGGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSPVPLLDQESK*ACSSTFALWGK Trigger: TTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR TCA 72 bp | GGCACAGACTTTGTTAGATGTTCGCACCGCATAAAGTaGACCTTTAGGCTTCAGTGTCTTACAAGGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTDFVRCSHRIK*TFRLQCLTRKL Trigger: AAGCTTCCTTGTAAGACACTGAAGCCTAAAGGTTCACTTTATGCGGTGCGAACATCTAACAAAGTCTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CCA 72 bp | TTTCCAATTCTGACACTAGCTGGTTGGTGGCCTTTGTaGATAACCAGTTCAGAAGACATTAGACCCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FPILTLAGWWPL*ITSSEDIRPIS Trigger: TGAGATGGGTCTAATGTCTTCTGAACTGGTTATCCACAAAGGCCACCAACCAGCTAGTGTCAGAATTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR GCA 72 bp | TACCTGAATGTATGTATATGCCCCGAATGCATGGAATaGGAATGGAAGTCAGAAGAAGAGGGTAGAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: YLNVCICPECME*EWKSEEEGRRS Trigger: AGATCTTCTACCCTCTTCTTCTGACTTCCATTCGCATTCCATGCATTCGGGGCATATACATACATTCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR GCA 72 bp | CCCATCTCATTTCAGCTATGGTTTCTCCTGTGCCTTTaGTGGATCAAGAGTCAAAATGAGCTTGTTCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: PISFQLWFLLCL*WIKSQNELVHL Trigger: TAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGAAATGAGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATACACATAAGCCATTCTaGCATGGAGAGAACACATGG | + |
|
Preference number: 3 (lower is better) Translates to: WIKSQNELVHLPLPYGANTHKPF*HGENTW Trigger: CCATGTGTTCTCTCCATGCAAGAATGGCTTATGTGT...ATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGACCTGTACAACATGGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATGACCCTTACTGCACTTaGACTGCGGGAAAAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YEDLYNMGLFSGFQVGRDDPYCT*TAGKIK Trigger: TTTTATTTTTCCCGCAGTCAAAGTGCAGTAAGGGTC...ATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR GCA 72 bp | ATTAGACCCATCTCATTTCAGCTATGGTTTCTCCTGTaGCTTTGCTGGATCAAGAGTCAAAATGAGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IRPISFQLWFLL*LCWIKSQNELV Trigger: AACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGAGAAACCATAGCTGAAATGAGATGGGTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CCA 72 bp | CATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATaGGAGAAGTCCCACAGAGAGTTGAATTTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HQNSETKLTAGK*EKSHRELNLLF Trigger: AAAGAGCAAATTCAACTCTCTGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CCA 72 bp | TTAAATACCTTAGGGTTTATGAAGACCTGTACAACATaGGTCTTTTCTCAGGGTTTCAGGTTGGTAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LNTLGFMKTCTT*VFSQGFRLVEM Trigger: CATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGTCTTCATAAACCCTAAGGTATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR TCA 72 bp | TCTACATTAAGTGGTTGTAACAAGAACCATGTGGGTTaGATTATGTACTGTCTCGTTCCTTGTAGCTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: STLSGCNKNHVG*IMYCLVPCSLL Trigger: TAGCAAGCTACAAGGAACGAGACAGTACATAATTCAACCCACATGGTTCTTGTTACAACCACTTAATGTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR TCA 72 bp | TTTAGAGGTAAGAAGAGGATTCTGGTAGGAATTTTGTaGACAGGGTTTCCATTCGTTAGAGTATTTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FRGKKRILVGIL*TGFPFVRVFPE Trigger: TTCAGGAAATACTCTAACGAATGGAAACCCTGTTCACAAAATTCCTACCAGAATCCTCTTCTTACCTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR GCA 72 bp | CTGGCAGTCCCACAACATTCCCATCTTCAGTATACATaGATGGTCTCTCAGTACTTAAAATTATATTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: LAVPQHSHLQYT*MVSQYLKLYLY Trigger: ATATAAATATAATTTTAAGTACTGAGAGACCATGCATGTATACTGAAGATGGGAATGTTGTGGGACTGCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR GCA 72 bp | TTCATGCTTATTTACCCAGAACTAGACATCCCAGGTTaGGTTTATGTTTGTTTGTTTGTTTGTTTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FMLIYPELDIPG*VYVCLFVCLFV Trigger: AACAAACAAACAAACAAACAAACAAACATAAACGCAACCTGGGATGTCTAGTTCTGGGTAAATAAGCATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVFVGYQGQGAWICGHTMTLSS*RFWPCS Trigger: TGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCAT...AGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGTCTGAGCATAGCATGTaGCAAGGCCACATACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHRRLFFTRSWKRRESEHSM*QGHIQK Trigger: TTTCTGTATGTGGCCTTGGCACATGCTATGCTCAGA...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGGCAGGACTGCCCTTCTaGAAGGAAGTTTCTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KASGHRRLFFTRSWKRREAGLPF*KEVSFE Trigger: TTCAAAAGAAACTTCCTTCCAGAAGGGCAGTCCTGC...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | ATTAAGAGTTGTGGCCTTGTTGGAGTAGGTGTGGCCTaGTTGGAGGAAGTGTGTCACTGTGGGGGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKSCGLVGVGVA*LEEVCHCGGGF Trigger: AAACCCACCCCCACAGTGACACACTTCCTCCAACAAGGCCACACCTACTCCAACAAGGCCACAACTCTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR CAA 72 bp | GATCAATACCAGGCACTCTCTGACCACTTGCCCTGTTaGCAAATCCTGAGAATCTGCCTTGCCTTTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DQYQALSDHLPC*QILRICLAFWV Trigger: CACCCAAAAGGCAAGGCAGATTCTCAGGATTTGCAAACAGGGCAAGTGGTCAGAGAGTGCCTGGTATTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTCCTTTTCCAGTACCATGTCTGCCTGGATGCTGTCATGCTTCCCAACATTGACGGTGGTCTTTTaGTGCAGAAAACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFSSTMSAWMLSCFPTLTVVF*CRKPIC Trigger: GCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAA...TGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTACTGGAAAAGGAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAGCGGTCACCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGAGGATTTTGTGTGCTTaGAATCATTTTCGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KASGHRRLFFTRSWKRRERILCA*NHFRSS Trigger: CGATGAGCGAAAATGATTTCAAGCACACAAAATCCT...CTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGGTGACCGCTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCTCCTTTTCCAGTACCATGTCTGCCTGGATGCTGTCATGCTTCCCAACAATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSFSSTMSAWMLSCFPTMTLSS*RFWPCS Trigger: TGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCAT...TGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTACTGGAAAAGGAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR CCA 90 bp | CCGCAGGCTCTTCTTCACAAGGTCTTGGAAGAGGAGGGAGATTTGGCACTCCCTGCCAAAATAGCCTCTTaGAACTCTATTACTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PQALLHKVLEEEGDLALPAKIAS*NSITVT Trigger: AGTCACAGTAATAGAGTTCCAAGAGGCTATTTTGGC...AGGGAGTGCCAAATCTCCCTCCTCTTCCAAGACCTTGTGAAGAAGAGCCTGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATGCTTCTCTCCCCTGTGTTGACGGTGGTCTTTTaGTGCAGAAAACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSLFIYLCLMGQMLLSPVLTVVF*CRKPIC Trigger: GCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAA...CACAGGGGAGAGAAGCATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGAGGGCTGAGCCATTTTACACAAGTCAGCCCTTTGGAAAGGTGTCTACTTTTCCTTCTTTATCCTaGCATCGTAGCTCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLRAEPFYTSQPFGKVSTFPSLS*HRSSTT Trigger: TGTGGTGGAGCTACGATGCCAGGATAAAGAAGGAAA...AGTAGACACCTTTCCAAAGGGCTGACTTGTGTAAAATGGCTCAGCCCTCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | AGCCAGCCCCAATTAGATGCTTTCCCTTACAAAGAGTaGGATGACCGTGATGTCTCTTCACAGCAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLDAFPYKE*DDRDVSSQQEN Trigger: GTTTTCTTGCTGTGAAGAGACATCACGGTCATCCAACTCTTTGTAAGGGAAAGCATCTAATTGGGGCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTGAGGGCTGAGCCATTTTACACAAGTCAGCCCTTTGGAAAGGTGTCTACTGAAGGAAGTTTCTTTTaGAAAGTAGCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRAEPFYTSQPFGKVSTEGSFF*KVAFPL Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACTTCCTTC...AGTAGACACCTTTCCAAAGGGCTGACTTGTGTAAAATGGCTCAGCCCTCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCCTGTGGATTAAGATGTAGAACTCTTGGCTCCTTTTCCAGTACCATGTCTTGCAGAAAACCCATTTaGCTTATGATAGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPCGLRCRTLGSFSSTMSCRKPI*LMIVQG Trigger: GCCCTGGACTATCATAAGGCAAATGGGTTTTCTGCA...AGACATGGTACTGGAAAAGGAGCCAAGAGTTCTACATCTTAATCCACAGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCCATTCGTTAGAGTATTTCCTGAACACATAAGCCATTCTTGCATGGAGCGTAGTGACTTTAGATaGAGGACTGCCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFPFVRVFPEHISHSCMERSDFR*RTALLE Trigger: TTCCAGAAGGGCAGTCCTGCATCTAAAGTCACTACG...CTCCATGCAAGAATGGCTTATGTGTTCAGGAAATACTCTAACGAATGGAAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGAGCAGGAAGCGCTCTTaGAGTAGCCTGGGCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVSRKRS*SSLGVS Trigger: TGACACGCCCAGGCTACTGCAAGAGCGCTTCCTGCT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGAAAGAAAATATAAAGTGCAAATCCTTAGACGTAAGACCCAGCCCTGGGGATGTACTCCGGAGCTaGGTTTCCTTCTTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVKENIKCKSLDVRPSPGDVLRS*VSFFIL Trigger: CAGGATAAAGAAGGAAACCCAGCTCCGGAGTACATC...CCCAGGGCTGGGTCTTACGTCTAAGGATTTGCACTTTATATTTTCTTTCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | TCCTGTGCCTTTGCTGGATCAAGAGTCAAAATGAGCTaGTTCATCTACCTTTGCCTTATGGGGCAAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCAFAGSRVKMS*FIYLCLMGQML Trigger: AAGCATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCAGCAAAGGCACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | GAATTTCCAATTCTGACACTAGCTGGTTGGTGGCCTTaGTGGATAACCAGTTCAGAAGACATTAGACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EFPILTLAGWWP*WITSSEDIRPI Trigger: GATGGGTCTAATGTCTTCTGAACTGGTTATCCACAAAGGCCACCAACCAGCTAGTGTCAGAATTGGAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | ACCTGTACAACATGGGTCTTTTCTCAGGGTTTCAGGTaGGTAGAGATGTCAGACATATACATACCTACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCTTWVFSQGFR*VEMSDIYIPTG Trigger: ACCGGTAGGTATGTATATGTCTGACATCTCTACCAACCTGAAACCCTGAGAAAAGACCCATGTTGTACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGAACACTTGGTCTCCAGCTCTTGATGTTTTCGAAGAGGTTGTGGAGACTGCCAAAATAGCCTCTTaGAACTCTATTACTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLNTWSPALDVFEEVVETAKIAS*NSITVT Trigger: AGTCACAGTAATAGAGTTCCAAGAGGCTATTTTGGC...AGTCTCCACAACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGCTGGGCGTGTCATTCTaGTTTTCTTCTCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVLGVSF*FSSLLS Trigger: GGAGAGGAGAGAAGAAAAGCAGAATGACACGCCCAG...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAGCTCTTGCAGTAGCCTaGGCGTGTCATTCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHKMPGCNLVMARTFCLKALAVA*ACHSAF Trigger: AAAAGCAGAATGACACGCCCAGGCTACTGCAAGAGC...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAAAGAAAATATAAAGTGCAAATCCTTAGACGTAAGACCCAGCCCTGGGGAAATCATGTTGAATTaGAGAATTCCAGACTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVKENIKCKSLDVRPSPGEIMLN*RIPDFV Trigger: CACGAAGTCTGGAATTCTGCAATTCAACATGATTTC...CCCAGGGCTGGGTCTTACGTCTAAGGATTTGCACTTTATATTTTCTTTCACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGCGTAGTGACTTTAGATaGAGGACTGCCCTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVRSDFR*RTALLE Trigger: TTCCAGAAGGGCAGTCCTGCATCTAAAGTCACTACG...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAGATGTACTCCGGAGCTaGGTTTCCTTCTTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHKMPGCNLVMARTFCLKDVLRS*VSFFIL Trigger: CAGGATAAAGAAGGAAACCCAGCTCCGGAGTACATC...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR TCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGTTGACGGTGGTCTTTTaGTGCAGAAAACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVLTVVF*CRKPIC Trigger: GCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAA...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR TCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGAACCCATTTGCCTTATaGTCTGAATGCTTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVNPFAL*SECFRL Trigger: CAGTCGGAAGCATTCAGATCATAAGGCAAATGGGTT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGTGCAGAAAACCCATTTaGCTTATGATAGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVCRKPI*LMIVQG Trigger: GCCCTGGACTATCATAAGGCAAATGGGTTTTCTGCA...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVMTLSS*RFWPCS Trigger: TGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCAT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR GCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGTCTGAGCATAGCATGTaGCAAGGCCACATACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVSEHSM*QGHIQK Trigger: TTTCTGTATGTGGCCTTGGCACATGCTATGCTCAGA...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAATTTCCTTCTTTATCCTaGCATCGTAGCTCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RHKMPGCNLVMARTFCLKFPSLS*HRSSTT Trigger: TGTGGTGGAGCTACGATGCCAGGATAAAGAAGGAAA...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGGCAGGACTGCCCTTCTaGAAGGAAGTTTCTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVAGLPF*KEVSFE Trigger: TTCAAAAGAAACTTCCTTCCAGAAGGGCAGTCCTGC...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR TCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGGAAGGAAGTTTCTTTTaGAAAGTAGCCTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVEGSFF*KVAFPL Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACTTCCTTC...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR TCA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGAGGATTTTGTGTGCTTaGAATCATTTTCGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: HKTSDELPLSYFFITLQVRILCA*NHFRSS Trigger: CGATGAGCGAAAATGATTTCAAGCACACAAAATCCT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAGCCAAAATAGCCTCTTaGAACTCTATTACTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RHKMPGCNLVMARTFCLKAKIAS*NSITVT Trigger: AGTCACAGTAATAGAGTTCCAAGAGGCTATTTTGGC...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR GCA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAGAAATCATGTTGAATTaGAGAATTCCAGACTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHKMPGCNLVMARTFCLKEIMLN*RIPDFV Trigger: CACGAAGTCTGGAATTCTGCAATTCAACATGATTTC...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| 3UTR CAA 72 bp | AGACATCCCAGGTTGCGTTTATGTTTGTTTGTTTGTTaGTTTGTTTGTTTTAATATGGGTAAAGTAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHPRLRLCLFVC*FVCFNMGKVVP Trigger: GGGGACTACTTTACCCATATTAAAACAAACAAACAAACAAACAAACAAACATAAACGCAACCTGGGATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| 3UTR CAA 72 bp | CTTAATGGATTTCCCTTATTAAATATCCGTGAGTGTTaGGAACTCAGGAGCAGAACAATAAGATCTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LNGFPLLNIREC*ELRSRTIRSEY Trigger: ATATTCAGATCTTATTGTTCTGCTCCTGAGTTCCAAACACTCACGGATATTTAATAAGGGAAATCCATTAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| 3UTR CAA 72 bp | CCAGAACTAGACATCCCAGGTTGCGTTTATGTTTGTTaGTTTGTTTGTTTGTTTGTTTTAATATGGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PELDIPGCVYVC*FVCLFVLIWVK Trigger: CTTTACCCATATTAAAACAAACAAACAAACAAACAAACAAACATAAACGCAACCTGGGATGTCTAGTTCTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS GCA 90 bp | GGAACAGCAGGAGCCACTAGTACTTCTAGCATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCAGTCGGAGCGCTGACTTCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GTAGATSTSSMTLSS*RFWPCSVGALTSQR Trigger: TCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGTGGCTCCTGCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS CCA 90 bp | GGAGCCACTAGTACTTCTAGCATGACTTTATCTTCCTGCAGGTTCTaGCCTTGCTCAGTCGGAGCGCTGACTTCACAGCGATACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GATSTSSMTLSSCRF*PCSVGALTSQRYSP Trigger: TGGAGAGTATCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGTGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS CCA 90 bp | GCTGTACCTAGTACTTCTAGCATGACTTTATCTTCCTGCAGGTTCTaGCCTTGCTCAGTCGGAGCGCTGACTTCACAGCGATACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVPSTSSMTLSSCRF*PCSVGALTSQRYSP Trigger: TGGAGAGTATCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGGTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS GCA 90 bp | TATGTGTGTGCTGTACCTAGTACTTCTAGCATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCAGTCGGAGCGCTGACTTCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: YVCAVPSTSSMTLSS*RFWPCSVGALTSQR Trigger: TCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGGTACAGCACACACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTATGATGCCGCTTATGTaGAGAACATCTACTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PQVFVGYQGQGAWICGHTMMPLM*RTSTCI Trigger: AATGCAAGTAGATGTTCTCAACATAAGCGGCATCAT...AGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTGGAAGGAAGTTTCTTTaGAAAAGTAGCCTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQVFVGYQGQGAWICGHTGRKFL*KSSLSS Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACTTCCTTCC...AGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS GCA 90 bp | GCCAAGGCCACATACAGAAATCACGAAGGCCACCACCACAACCGTTaGTATGATGCCGCTTATGTTGAGAACATCTACTTGCATTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKATYRNHEGHHHNR*YDAAYVENIYLHSL Trigger: AAGCGAATGCAAGTAGATGTTCTCAACATAAGCGGCATCATAGCAACGGTTGTGGTGGTGGCCTTCGTGATTTCTGTATGTGGCCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTGTTTGTTGGCTACCAGGGGCAAGGAGCTTGGATCTGTGGGCACACTAAGGATTTTGTGTGCTaGAAATCATTTTCGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PQVFVGYQGQGAWICGHTKDFVC*KSFSLI Trigger: GATGAGCGAAAATGATTTCAAGCACACAAAATCCTT...AGTGTGCCCACAGATCCAAGCTCCTTGCCCCTGGTAGCCAACAAACACCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGTGGGTTTTGAGGTCACCCAGTATGACACATAGTTTCCTTCTACTCCCTCTTGACGGTGGTCTTTaGATGCAGAAAACCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGWVLRSPSMTHSFLLLPLDGGL*MQKTHL Trigger: CAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAG...AGGGAGTAGAAGGAAACTATGTGTCATACTGGGTGACCTCAAAACCCACCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS CCA 90 bp | CTGTCCCACCTTCTTCCACTCCAGTCTGGAGGAGGTAGTCTTCTTTaGGGTTTTACAAGCCAAAATAGCCTCTTGGAACTCTATTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHLLPLQSGGGSLL*GFTSQNSLLELYYC Trigger: ACAGTAATAGAGTTCCAAGAGGCTATTTTGGCTTGTAAAACCCCAAAGAAGACTACCTCCTCCAGACTGGAGTGGAAGAAGGTGGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTACCCTCTGTGTTCTCTGACTTTAGAAGTTGGCCGGGATCCAAGCGTAGACTTGACGGTGGTCTTTaGATGCAGAAAACCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPSVFSDFRSWPGSKRRLDGGL*MQKTHL Trigger: CAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAG...TCTACGCTTGGATCCCGGCCAACTTCTAAAGTCAGAGAACACAGAGGGTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS TCA 90 bp | AGCCTCTTGGAACTCTATTACTGTGACTTCTTGACGGTGGTCTTTTaGTGCAGAAAACCCATTTGCCTTATGATAGTCCAGGGCGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLELYYCDFLTVVF*CRKPICLMIVQGDD Trigger: ATCGTCGCCCTGGACTATCATAAGGCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAGAAGTCACAGTAATAGAGTTCCAAGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 |
||
| CDS-3UTR CAA 90 bp | GTACCATGTCTGCCTGGATGCTGTCATGCTTCCCAACATGATGATAAATGGACTATGCAGAAAACCCATTaGCCTTATGATAGTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPCLPGCCHASQHDDKWTMQKTH*PYDSPG Trigger: CCCTGGACTATCATAAGGCAAATGGGTTTTCTGCAT...AGTCCATTTATCATCATGTTGGGAAGCATGACAGCATCCAGGCAGACATGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
||
| CDS-3UTR CAA 90 bp | GCCATCAGAATTCAGAGACAAAACTCACAGCTGGAAAATGGGAGAAGTCCCACAATGCAGAAAACCCATTaGCCTTATGATAGTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AIRIQRQNSQLENGRSPTMQKTH*PYDSPG Trigger: CCCTGGACTATCATAAGGCAAATGGGTTTTCTGCAT...TGTGGGACTTCTCCCATTTTCCAGCTGTGAGTTTTGTCTCTGAATTCTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCTTGGATCTGTGGGCACACTTACCTGTACTCTACATTAAGTGGTTGTATCTTGGAAATCATGTaGAATTGCAGAATTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGAWICGHTYLYSTLSGCILEIM*NCRIPD Trigger: GTCTGGAATTCTGCAATTCAACATGATTTCCAAGAT...ACAACCACTTAATGTAGAGTACAGGTAAGTGTGCCCACAGATCCAAGCTCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTCCATTCGTTAGAGTATTTCCTGAACACATAAGCCATTCTTGCATGGAGGGAAATCATGTTGAATaGCAGAATTCCAGACTTCGT | + |
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Preference number: 5 (lower is better) Translates to: GFPFVRVFPEHISHSCMEGNHVE*QNSRLR Trigger: ACGAAGTCTGGAATTCTGCAATTCAACATGATTTCC...CTCCATGCAAGAATGGCTTATGTGTTCAGGAAATACTCTAACGAATGGAAACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| CDS-3UTR CAA 90 bp | TGGATCAAGAGTCAAAATGAGCTTGTTCATCTACCTTTGCCTTATGGGGCAAATTCTCCACTGTCCATCTaGGAAATCATGTTGAATTGC | + |
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Preference number: 5 (lower is better) Translates to: WIKSQNELVHLPLPYGANSPLSI*EIMLNC Trigger: GCAATTCAACATGATTTCCAAGATGGACAGTGGAGA...ATTTGCCCCATAAGGCAAAGGTAGATGAACAAGCTCATTTTGACTCTTGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114195.8 |
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| CDS-3UTR CAA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAACTTGACGGTGGTCTTTaGATGCAGAAAACCCATTTG | + |
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Preference number: 5 (lower is better) Translates to: RHKMPGCNLVMARTFCLKLDGGL*MQKTHL Trigger: CAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAG...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAATCTCCACTGTCCATCTaGGAAATCATGTTGAATTGC | + |
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Preference number: 5 (lower is better) Translates to: RHKMPGCNLVMARTFCLKSPLSI*EIMLNC Trigger: GCAATTCAACATGATTTCCAAGATGGACAGTGGAGA...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGGGAAATCATGTTGAATaGCAGAATTCCAGACTTCGT | + |
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Preference number: 5 (lower is better) Translates to: HKTSDELPLSYFFITLQVGNHVE*QNSRLR Trigger: ACGAAGTCTGGAATTCTGCAATTCAACATGATTTCC...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAATGATGCCGCTTATGTaGAGAACATCTACTTGCATT | + |
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Preference number: 5 (lower is better) Translates to: RHKMPGCNLVMARTFCLKMMPLM*RTSTCI Trigger: AATGCAAGTAGATGTTCTCAACATAAGCGGCATCAT...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGGGAAGGAAGTTTCTTTaGAAAAGTAGCCTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HKTSDELPLSYFFITLQVGRKFL*KSSLSS Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACTTCCTTCC...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGATGCAGAAAACCCATTaGCCTTATGATCTGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: HKTSDELPLSYFFITLQVMQKTH*PYDLNA Trigger: AGCATTCAGATCATAAGGCAAATGGGTTTTCTGCAT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | CATAAAACTTCTGATGAACTCCCACTTTCATATTTCTTCATCACTTTGCAAGTGATCTTGGAAATCATGTaGAATTGCAGAATTCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: HKTSDELPLSYFFITLQVILEIM*NCRIPD Trigger: GTCTGGAATTCTGCAATTCAACATGATTTCCAAGAT...CACTTGCAAAGTGATGAAGAAATATGAAAGTGGGAGTTCATCAGAAGTTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS-3UTR CAA 90 bp | AGACACAAGATGCCAGGTTGTAATTTAGTGATGGCAAGAACATTTTGCTTAAAAAAGGATTTTGTGTGCTaGAAATCATTTTCGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: RHKMPGCNLVMARTFCLKKDFVC*KSFSLI Trigger: GATGAGCGAAAATGATTTCAAGCACACAAAATCCTT...TTTTAAGCAAAATGTTCTTGCCATCACTAAATTACAACCTGGCATCTTGTGTCT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CCA 72 bp | TCTTTCCGCGGGGCTGGGGGACGAGGACGGGACAGCTaGCAGCCGTTACATATGTGTGTGCTGTACCTAGTA | + |
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Preference number: 6 (lower is better) Translates to: SFRGAGGRGRDS*QPLHMCVLYLV Trigger: TACTAGGTACAGCACACACATATGTAACGGCTGCCAGCTGTCCCGTCCTCGTCCCCCAGCCCCGCGGAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| CDS TCA 72 bp | CTTCCTGCAGGTTCTGGCCTTGCTCAGTCGGAGCGCTaGCTTCACAGCGATACTCTCCAGCATCACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPAGSGLAQSER*LHSDTLQHHFL Trigger: CAAGAAGTGATGCTGGAGAGTATCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 90 bp | CACCACAACCGTTGCTATGATGCCGCTTATGTTGAGAACATCTACTaGCATTCGCTTCCCAGGGCACCTGCGGTGTCCGACAGAGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: HHNRCYDAAYVENIY*HSLPRAPAVSDRVP Trigger: CGGAACTCTGTCGGACACCGCAGGTGCCCTGGGAAGCGAATGCAAGTAGATGTTCTCAACATAAGCGGCATCATAGCAACGGTTGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 72 bp | CTCAGCACGGTCTTTAAAGTCACCTTGGAGAGCCTGTaGGTAGTAGACCAAGGAGACCCCCTGTCCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSTVFKVTLESL*VVDQGDPLSHL Trigger: AAGGTGGGACAGGGGGTCTCCTTGGTCTACTACCAACAGGCTCTCCAAGGTGACTTTAAAGACCGTGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 72 bp | CGTTGCTATGATGCCGCTTATGTTGAGAACATCTACTaGCATTCGCTTCCCAGGGCACCTGCGGTGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: RCYDAAYVENIY*HSLPRAPAVSD Trigger: GTCGGACACCGCAGGTGCCCTGGGAAGCGAATGCAAGTAGATGTTCTCAACATAAGCGGCATCATAGCAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS GCA 72 bp | GGAGCCACTAGTACTTCTAGCATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCAGTCGGAGCGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: GATSTSSMTLSS*RFWPCSVGALT Trigger: AGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGTGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS TCA 72 bp | AGGCAGGAACAGCAGGAGCCACTAGTACTTCTAGCATaGCTTTATCTTCCTGCAGGTTCTGGCCTTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RQEQQEPLVLLA*LYLPAGSGLAQ Trigger: CTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGTGGCTCCTGCTGTTCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS GCA 72 bp | TCTAGCATGACTTTATCTTCCTGCAGGTTCTGGCCTTaGTCAGTCGGAGCGCTGACTTCACAGCGATACTCT | + |
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Preference number: 6 (lower is better) Translates to: SSMTLSSCRFWP*SVGALTSQRYS Trigger: AGAGTATCGCTGTGAAGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS GCA 72 bp | GCTGTACCTAGTACTTCTAGCATGACTTTATCTTCCTaGAGGTTCTGGCCTTGCTCAGTCGGAGCGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: AVPSTSSMTLSS*RFWPCSVGALT Trigger: AGTCAGCGCTCCGACTGAGCAAGGCCAGAACCTGCAGGAAGATAAAGTCATGCTAGAAGTACTAGGTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098407.3 |
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| CDS CCA 72 bp | CAGATGTACTCCGGAGCTGGGTTTCCTTCTTTATCCTaGCATCGTAGCTCCACCACACTTCCAGTCATAACA | + |
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Preference number: 6 (lower is better) Translates to: QMYSGAGFPSLS*HRSSTTLPVIT Trigger: TGTTATGACTGGAAGTGTGGTGGAGCTACGATGCCAGGATAAAGAAGGAAACCCAGCTCCGGAGTACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS TCA 72 bp | CGGTGGTCTTTTGATGCAGAAAACCCATTTGCCTTATaGTCTGAATGCTTCCGACTGTTCCGACTCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: RWSFDAENPFAL*SECFRLFRLPP Trigger: TGGTGGGAGTCGGAACAGTCGGAAGCATTCAGATCATAAGGCAAATGGGTTTTCTGCATCAAAAGACCACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
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| CDS CAA 72 bp | GAAATCTATCATCTCAGCACGGTCTTTAAAGTCACCTaGGAGAGCCTGTTGGTAGTAGACCAAGGAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: EIYHLSTVFKVT*ESLLVVDQGDP Trigger: GGGGTCTCCTTGGTCTACTACCAACAGGCTCTCCAAGGTGACTTTAAAGACCGTGCTGAGATGATAGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 90 bp | TCGTATATTGAAATCTATCATCTCAGCACGGTCTTTAAAGTCACCTaGGAGAGCCTGTTGGTAGTAGACCAAGGAGACCCCCTGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SYIEIYHLSTVFKVT*ESLLVVDQGDPLSH Trigger: GTGGGACAGGGGGTCTCCTTGGTCTACTACCAACAGGCTCTCCAAGGTGACTTTAAAGACCGTGCTGAGATGATAGATTTCAATATACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS GCA 72 bp | CTTTTGAAAAGTAGCCTTTCCTCTGAGCATAGCATGTaGCAAGGCCACATACAGAAATCACGAAGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: LLKSSLSSEHSM*QGHIQKSRRPP Trigger: TGGTGGCCTTCGTGATTTCTGTATGTGGCCTTGGCACATGCTATGCTCAGAGGAAAGGCTACTTTTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CCA 72 bp | CTTCTTCCACTCCAGTCTGGAGGAGGTAGTCTTCTTTaGGGTTTTACAAGCCAAAATAGCCTCTTGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: LLPLQSGGGSLL*GFTSQNSLLEL Trigger: GAGTTCCAAGAGGCTATTTTGGCTTGTAAAACCCCAAAGAAGACTACCTCCTCCAGACTGGAGTGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS GCA 72 bp | ACATACAGAAATCACGAAGGCCACCACCACAACCGTTaGTATGATGCCGCTTATGTTGAGAACATCTACTTG | + |
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Preference number: 6 (lower is better) Translates to: TYRNHEGHHHNR*YDAAYVENIYL Trigger: CAAGTAGATGTTCTCAACATAAGCGGCATCATAGCAACGGTTGTGGTGGTGGCCTTCGTGATTTCTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 72 bp | CTTCTTGACGGTGGTCTTTTGATGCAGAAAACCCATTaGCCTTATGATAGTCCAGGGCGACGATCAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LLDGGLLMQKTH*PYDSPGRRSSS Trigger: ACTACTTGATCGTCGCCCTGGACTATCATAAGGCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 |
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| CDS CAA 72 bp | ATTCCAGACTTCGTGTTCATTGTGTACGAGCTGTTGTaGTGTGTGCCGCCTTTTGGATTCCCTAGCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: IPDFVFIVYELL*CVPPFGFPSKL Trigger: AAGTTTGCTAGGGAATCCAAAAGGCGGCACACACAACAACAGCTCGTACACAATGAACACGAAGTCTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 72 bp | CTTCTTGACGGTGGTCTTTTGATGCAGAAAACCCATTaGCCTTATGATCTGAATGCTTCCGACTGTTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LLDGGLLMQKTH*PYDLNASDCSD Trigger: GTCGGAACAGTCGGAAGCATTCAGATCATAAGGCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231910.2 |
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| CDS TCA 72 bp | GAACTCTATTACTGTGACTTCTTGACGGTGGTCTTTTaGTGCAGAAAACCCATTTGCCTTATGATAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ELYYCDFLTVVF*CRKPICLMIVQ Trigger: CTGGACTATCATAAGGCAAATGGGTTTTCTGCATCAAAAGACCACCGTCAAGAAGTCACAGTAATAGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 |
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| CDS GCA 72 bp | TACTCTCCACTGTCCATCTTGGAAATCATGTTGAATTaGAGAATTCCAGACTTCGTGTTCATTGTGTACGAG | + |
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Preference number: 6 (lower is better) Translates to: YSPLSILEIMLN*RIPDFVFIVYE Trigger: CTCGTACACAATGAACACGAAGTCTGGAATTCTGCAATTCAACATGATTTCCAAGATGGACAGTGGAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114195.8 ENSMUST00000231910.2 |
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| CDS CAA 72 bp | CCAGCATCACTTCTTGTAACATTTTTGATTCGTATATaGAAATCTATCATCTCAGCACGGTCTTTAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PASLLVTFLIRI*KSIISARSLKS Trigger: TGACTTTAAAGACCGTGCTGAGATGATAGATTTCAATATACGAATCAAAAATGTTACAAGAAGTGATGCTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098407.3 ENSMUST00000114195.8 ENSMUST00000231910.2 |
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