Pregenerated sensors for JAKMIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063646Ensembl transcript IDs: ENSMUST00000043794.11, ENSMUST00000121010.9, ENSMUST00000137019.8, ENSMUST00000172917.8, ENSMUST00000173836.8, ENSMUST00000174097.8, ENSMUST00000174629.2, ENSMUST00000208852.2, ENSMUST00000212047.2
Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCAGTCCATGGAGATTTATGTACATGGGGCAGAGGGGCTGTCTaGGTCCCTCTAGGCACTCGCGGTGCCTTCAGGGAGGCACACAAC | + |
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Preference number: 1 (lower is better) Translates to: HSVHGDLCTWGRGAV*VPLGTRGAFREAHN Trigger: GTTGTGTGCCTCCCTGAAGGCACCGCGAGTGCCTAGAGGGACTCAGACAGCCCCTCTGCCCCATGTACATAAATCTCCATGGACTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 90 bp | ACAGCCCCTCTTCCGTCCAGAGCACTGTCCTCGCCTCTCTGTGTTTaGATCTGGCTTCCCTACAATGTCCGGTCCCTGCTCCATGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TAPLPSRALSSPLCV*IWLPYNVRSLLHGS Trigger: GGAACCATGGAGCAGGGACCGGACATTGTAGGGAAGCCAGATTCAAACACAGAGAGGCGAGGACAGTGCTCTGGACGGAAGAGGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | ATCCACCTTTGCCCTTGGCTCCTGAAGATGTCACAGTGGGGATACTaGGAAGGCTTGCCATTGTCCTGCAGAGCTCCACAGCAGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: IHLCPWLLKMSQWGY*EGLPLSCRAPQQRL Trigger: CAGCCTCTGCTGTGGAGCTCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | GCCATCCAGATCCACCTTTGCCCTTGGCTCCTGAAGATGTCACAGTaGGGATACTGGGAAGGCTTGCCATTGTCCTGCAGAGCTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: AIQIHLCPWLLKMSQ*GYWEGLPLSCRAPQ Trigger: CTGTGGAGCTCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | GGTCCCCACATTGGCGATTCCAACTCTCTCTTGCTGGTCACTAGCTaGCAGTCCAGCTGTGCATGGAGTCAGAGGTTTCGTTGGTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: GPHIGDSNSLLLVTS*QSSCAWSQRFRWLL Trigger: GAGCAACCAACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | GGGTGCTCCTGGCCTCAGACCTCAGACCTCAGAGCCTCTGAGTGCTaGACTACCAGCCTGAGCTCCTTCACAGGATATCCCTACAAATTA | + |
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Preference number: 1 (lower is better) Translates to: GCSWPQTSDLRASEC*TTSLSSFTGYPYKL Trigger: TAATTTGTAGGGATATCCTGTGAAGGAGCTCAGGCTGGTAGTGCAGCACTCAGAGGCTCTGAGGTCTGAGGTCTGAGGCCAGGAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | AAAGGGTGCTCCTGGCCTCAGACCTCAGACCTCAGAGCCTCTGAGTaGTGCACTACCAGCCTGAGCTCCTTCACAGGATATCCCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: KGCSWPQTSDLRASE*CTTSLSSFTGYPYK Trigger: TTTGTAGGGATATCCTGTGAAGGAGCTCAGGCTGGTAGTGCAGCACTCAGAGGCTCTGAGGTCTGAGGTCTGAGGCCAGGAGCACCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | CTAGCTGCCAGTCCAGCTGTGCATGGAGTCAGAGGTTTCGTTGGTTaGTCTGGCAGACAGACTCTGGAAGAACACACTCAGTCCATGGAG | + |
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Preference number: 1 (lower is better) Translates to: LAASPAVHGVRGFVG*SGRQTLEEHTQSME Trigger: CTCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | TCTACAATCCACAGGGTCCCCACATTGGCGATTCCAACTCTCTCTTaGTGGTCACTAGCTGCCAGTCCAGCTGTGCATGGAGTCAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: STIHRVPTLAIPTLS*WSLAASPAVHGVRG Trigger: ACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTGGATTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | TCCAACTCTCTCTTGCTGGTCACTAGCTGCCAGTCCAGCTGTGCATaGAGTCAGAGGTTTCGTTGGTTGCTCTGGCAGACAGACTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SNSLLLVTSCQSSCA*SQRFRWLLWQTDSG Trigger: TCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | AGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTaGAGACGTCATAGCTCCCGGGATGACCTCCTGTCTGGACAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RESTLLSHSAVFASS*RRHSSRDDLLSGQP Trigger: GGGCTGTCCAGACAGGAGGTCATCCCGGGAGCTATGACGTCTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 90 bp | TTATCTTACCCCCTGTGCTCTGGGAGGCCCCAACACCTGAGGAGATaGCTCTACTCTCTACCAAGAATCCTGGGCAGTGAAGGCTCTACA | + |
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Preference number: 1 (lower is better) Translates to: LSYPLCSGRPQHLRR*LYSLPRILGSEGST Trigger: TGTAGAGCCTTCACTGCCCAGGATTCTTGGTAGAGAGTAGAGTCATCTCCTCAGGTGTTGGGGCCTCCCAGAGCACAGGGGGTAAGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | GTCACTAGCTGCCAGTCCAGCTGTGCATGGAGTCAGAGGTTTCGTTaGTTGCTCTGGCAGACAGACTCTGGAAGAACACACTCAGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: VTSCQSSCAWSQRFR*LLWQTDSGRTHSVH Trigger: ATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 90 bp | TCCCTACAATGTCCGGTCCCTGCTCCATGGTTCCATCAATGGGCCTaGTCTGAGCCCCAGTCAATCTTCTTGCTTCCAGGAAATCATGGT | + |
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Preference number: 1 (lower is better) Translates to: SLQCPVPAPWFHQWA*SEPQSIFLLPGNHG Trigger: ACCATGATTTCCTGGAAGCAAGAAGATTGACTGGGGCTCAGATCAGGCCCATTGATGGAACCATGGAGCAGGGACCGGACATTGTAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | CTATCCCCCAAGGTAGTAGCTCCCATGTCCTGGGCTTCCACTAATTaGACTTATCGATTTCTGCCATCCAGATCCACCTTTGCCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LSPKVVAPMSWASTN*TYRFLPSRSTFALG Trigger: GCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAATTAGTGGAAGCCCAGGACATGGGAGCTACTACCTTGGGGGATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | CCTCACTTCTCCCTGGACTTAGGCACAGCCATGCTCTGGGACTTATaGAGTGTCACACCTATAAGTGTCAGAGCCTTCAGCTTTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PHFSLDLGTAMLWDL*SVTPISVRAFSFPQ Trigger: CTGAGGAAAGCTGAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGTGCCTAAGTCCAGGGAGAAGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | TTGGTTGCTCTGGCAGACAGACTCTGGAAGAACACACTCAGTCCATaGAGATTTATGTACATGGGGCAGAGGGGCTGTCTGAGTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LVALADRLWKNTLSP*RFMYMGQRGCLSPS Trigger: AGAGGGACTCAGACAGCCCCTCTGCCCCATGTACATAAATCTCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 90 bp | ACTTATCGATTTCTGCCATCCAGATCCACCTTTGCCCTTGGCTCCTaGAGATGTCACAGTGGGGATACTGGGAAGGCTTGCCATTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TYRFLPSRSTFALGS*RCHSGDTGKACHCP Trigger: AGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 90 bp | CATGGTTCCATCAATGGGCCTGATCTGAGCCCCAGTCAATCTTCTTaGTTCCAGGAAATCATGGTGCCACTAGCTTGGTCCTGTAACTAC | + |
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Preference number: 1 (lower is better) Translates to: HGSINGPDLSPSQSS*FQEIMVPLAWSCNY Trigger: GTAGTTACAGGACCAAGCTAGTGGCACCATGATTTCCTGGAAGCAAGAAGATTGACTGGGGCTCAGATCAGGCCCATTGATGGAACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | TGCATGGAGTCAGAGGTTTCGTTGGTTGCTCTGGCAGACAGACTCTaGAAGAACACACTCAGTCCATGGAGATTTATGTACATGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CMESEVSLVALADRL*KNTLSPWRFMYMGQ Trigger: CTGCCCCATGTACATAAATCTCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGACTCCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 90 bp | ACACCTGAGGAGATGACTCTACTCTCTACCAAGAATCCTGGGCAGTaGAGGCTCTACAGTAGTTTTCTTTATGGTAAAGGGTGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TPEEMTLLSTKNPGQ*RLYSSFLYGKGCSW Trigger: CCAGGAGCACCCTTTACCATAAAGAAAACTACTGTAGAGCCTTCACTGCCCAGGATTCTTGGTAGAGAGTAGAGTCATCTCCTCAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 90 bp | CTGAGCTCCTTCACAGGATATCCCTACAAATTACAACAGATAGCTTaGGTCTGTTTTCTCTGTCCTCACTTCTCCCTGGACTTAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: LSSFTGYPYKLQQIA*VCFLCPHFSLDLGT Trigger: TGTGCCTAAGTCCAGGGAGAAGTGAGGACAGAGAAAACAGACCCAAGCTATCTGTTGTAATTTGTAGGGATATCCTGTGAAGGAGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGGCAGAGGGGCTGTCTaGGTCCCTCTAGGCACTCGC | + |
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Preference number: 2 (lower is better) Translates to: IAPGMTSCLDSPSSVQSTGRGAV*VPLGTR Trigger: GCGAGTGCCTAGAGGGACTCAGACAGCCCCTCTGCC...AGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGAGCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGTCCTCTTCATCTGGCCTGCTaGCTCCGTGTCTCATCGAGC | + |
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Preference number: 2 (lower is better) Translates to: SRDDLLSGQPLFRPEHCPLHLAC*LRVSSS Trigger: GCTCGATGAGACACGGAGGCAGCAGGCCAGATGAAG...AGGACAGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | TGCCCTTGGCTCCTGAAGATGTCACAGTGGGGATACTGGGAAGGCTaGCCATTGTCCTGCAGAGCTCCACAGCAGAGGCTGGCCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CPWLLKMSQWGYWEG*PLSCRAPQQRLARS Trigger: GGACCTGGCCAGCCTCTGCTGTGGAGCTCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGTCCTTTATCTTACCCCCTGTaGTCTGGGAGGCCCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: SRDDLLSGQPLFRPEHCPLSYPL*SGRPQH Trigger: GTGTTGGGGCCTCCCAGAGCACAGGGGGTAAGATAA...AGGACAGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGGGTCACAGGTGTTGGGGGATTACCCCCTGTGCTCTaGGAGGCCCCAACACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SHWVVVGCRGLWVTGVGGLPPVL*EAPTPE Trigger: CTCAGGTGTTGGGGCCTCCCAGAGCACAGGGGGTAA...TCCCCCAACACCTGTGACCCATAAGCCTCTGCAACCTACCACTACCCAGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | GACAGCCCCTCTTCCGTCCAGAGCACTGTCCTCGCCTCTCTGTGTTaGAATCTGGCTTCCCTACAATGTCCGGTCCCTGCTCCATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: DSPSSVQSTVLASLC*NLASLQCPVPAPWF Trigger: GAACCATGGAGCAGGGACCGGACATTGTAGGGAAGCCAGATTCAAACACAGAGAGGCGAGGACAGTGCTCTGGACGGAAGAGGGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAAGATGTCACAGTGGGGATACTGGGAAGGCTTGCCATTGTCCTGCAGAGGATTTTGGTTTCAGTaGGGATGGGGCACCACGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLKMSQWGYWEGLPLSCRGFWFQ*GWGTTG Trigger: CCCCGTGGTGCCCCATCCTCACTGAAACCAAAATCC...TCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACCTCAGACCTCAGAGCCTCTGAGTGCTGCACTACCAGCCTGAGCTCCTTCCTGGCAGACAGACTCTaGAAGAACACACTCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: QTSDLRASECCTTSLSSFLADRL*KNTLSP Trigger: TGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAG...GAAGGAGCTCAGGCTGGTAGTGCAGCACTCAGAGGCTCTGAGGTCTGAGGTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | ATCTACAATCCACAGGGTCCCCACATTGGCGATTCCAACTCTCTCTaGCTGGTCACTAGCTGCCAGTCCAGCTGTGCATGGAGTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: IYNPQGPHIGDSNSL*LVTSCQSSCAWSQR Trigger: CCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTGGATTGTAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGTCCTAACACACTCAGTCCATaGAGATTTATGTACATGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRDDLLSGQPLFRPEHCPNTLSP*RFMYMG Trigger: CCCCATGTACATAAATCTCCATGGACTGAGTGTGTT...AGGACAGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | ACTAGCTGCCAGTCCAGCTGTGCATGGAGTCAGAGGTTTCGTTGGTaGCTCTGGCAGACAGACTCTGGAAGAACACACTCAGTCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: TSCQSSCAWSQRFRW*LWQTDSGRTHSVHG Trigger: TCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCATGCTCTGGGACTTATGCAGTGTCACACCTATAAGTGTCAGAGCCTTCGGCTTGCCATTGTCCTaGAGAGCTCCACAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TAMLWDLCSVTPISVRAFGLPLS*RAPQQR Trigger: CCTCTGCTGTGGAGCTCTGCAGGACAATGGCAAGCC...GAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGACTCAGATTTCAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTGGTAAAGGGTGCTCCTaGCCTCAGACCTCAGACCTC | + |
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Preference number: 2 (lower is better) Translates to: GGLRFQQRVNTSEPFCCVGKGCS*PQTSDL Trigger: GAGGTCTGAGGTCTGAGGCCAGGAGCACCCTTTACC...AACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTGAAATCTGAGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | GCCTTCAGCTTTCCTCAGAAATCTACAATCCACAGGGTCCCCACATaGGCGATTCCAACTCTCTCTTGCTGGTCACTAGCTGCCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: AFSFPQKSTIHRVPT*AIPTLSCWSLAASP Trigger: TGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTGGATTGTAGATTTCTGAGGAAAGCTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | CTAATTGCACTTATCGATTTCTGCCATCCAGATCCACCTTTGCCCTaGGCTCCTGAAGATGTCACAGTGGGGATACTGGGAAGGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LIALIDFCHPDPPLP*APEDVTVGILGRLA Trigger: GGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 90 bp | CTTCCACTAATTGCACTTATCGATTTCTGCCATCCAGATCCACCTTaGCCCTTGGCTCCTGAAGATGTCACAGTGGGGATACTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPLIALIDFCHPDPP*PLAPEDVTVGILGR Trigger: CCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAATTAGTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGATCCAGATCCACCTTTaGCCTTGGCTCCTGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: QQRVNTSEPFCCVCFKLEIQIHL*PWLLKM Trigger: CATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGAT...CTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATGCTCTGGGACTTATGCAGTGTCACACCTATAAGTGTCAGAGCCTTCATCCACCTTTGCCCTTaGCTCCTGAAGATGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: TAMLWDLCSVTPISVRAFIHLCP*LLKMSQ Trigger: CTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGAT...GAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCATGCTCTGGGACTTATGCAGTGTCACACCTATAAGTGTCAGAGCCTTCGGCCTCCCCTTTAAGTaGCTGTCAAATGTGCGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TAMLWDLCSVTPISVRAFGLPFK*LSNVRK Trigger: TTTACGCACATTTGACAGTCACTTAAAGGGGAGGCC...GAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGACTCAGATTTCAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTATTCCAACTCTCTCTTaGTGGTCACTAGCTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGLRFQQRVNTSEPFCCVIPTLS*WSLAAS Trigger: ACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAAT...AACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTGAAATCTGAGTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGTCAGGCTCTGGACTTTaGAAAGCTTTGTTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QQRVNTSEPFCCVCFKLESGSGL*KALLLL Trigger: CAACAGCAACAAAGCTTTTCAAAGTCCAGAGCCTGA...CTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGGACTCAGATTTCAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGAAGAATCCTGGGCAGTaGAGGCTCTACAGTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LGDSDFSRESTLLSHSAVKNPGQ*RLYSSF Trigger: AAAACTACTGTAGAGCCTTCACTGCCCAGGATTCTT...CACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTGAAATCTGAGTCCCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATGCTCTGGGACTTATGCAGTGTCACACCTATAAGTGTCAGAGCCTTCTCTGTGTTCAGGCTCTaGACTTTGAAAAGCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TAMLWDLCSVTPISVRAFSVFRL*TLKSFV Trigger: AACAAAGCTTTTCAAAGTCCAGAGCCTGAACACAGA...GAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGACTCAGATTTCAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTTACAACAGATAGCTTaGGTCTGTTTTCTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GGLRFQQRVNTSEPFCCVLQQIA*VCFLCP Trigger: AGGACAGAGAAAACAGACCCAAGCTATCTGTTGTAA...AACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTGAAATCTGAGTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGCTCTACAGTAGTTTTCTTTATGGTAAAGGGTGCTCCTGGCCTCAGACCTAGTGACTGTCAAATGTaGGTAAATTCTGTGTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: EGSTVVFFMVKGAPGLRPSDCQM*VNSVFR Trigger: CCTGAACACAGAATTTACGCACATTTGACAGTCACT...AGGTCTGAGGCCAGGAGCACCCTTTACCATAAAGAAAACTACTGTAGAGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCTTGGGATTTAATTAAGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGATGCTCTGGGACTTATaGAGTGTCACACCTATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IPWDLIKPLGSGRLQRLMMLWDL*SVTPIS Trigger: ACTTATAGGTGTGACACTGCATAAGTCCCAGAGCAT...CATAAGCCTCTGCAACCTACCACTACCCAGTGGCTTAATTAAATCCCAAGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CCA 90 bp | CACACTGTCAATCTGATGGCTAACATTCTCTCCACCCCAAGTTTGAAAGAGTATCCCAAAGTTACTTCTTaGGGAATTTCCTCTGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HTVNLMANILSTPSLKEYPKVTS*GISSGS Trigger: ACTTCCAGAGGAAATTCCCCAAGAAGTAACTTTGGG...ATACTCTTTCAAACTTGGGGTGGAGAGAATGTTAGCCATCAGATTGACAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | CAGAGGGGCTGTCTGAGTCCCTCTAGGCACTCGCGGTaGCTTCAGGGAGGCACACAACACGGGGACAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGCLSPSRHSR*LQGGTQHGDRA Trigger: AGCCCTGTCCCCGTGTTGTGTGCCTCCCTGAAGGCACCGCGAGTGCCTAGAGGGACTCAGACAGCCCCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 72 bp | CATGGAGATTTATGTACATGGGGCAGAGGGGCTGTCTaGGTCCCTCTAGGCACTCGCGGTGCCTTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HGDLCTWGRGAV*VPLGTRGAFRE Trigger: CTCCCTGAAGGCACCGCGAGTGCCTAGAGGGACTCAGACAGCCCCTCTGCCCCATGTACATAAATCTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | TGGCCTCAGACCTCAGACCTCAGAGCCTCTGAGTGCTaGACTACCAGCCTGAGCTCCTTCACAGGATATCCC | + |
|
Preference number: 3 (lower is better) Translates to: WPQTSDLRASEC*TTSLSSFTGYP Trigger: GGGATATCCTGTGAAGGAGCTCAGGCTGGTAGTGCAGCACTCAGAGGCTCTGAGGTCTGAGGTCTGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGCTCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGATTCCAAAAGCTCTTaGTCTAGCCCGAGTTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: IAPGMTSCLDSPSSVQSTDSKSS*SSPSSR Trigger: CCGAGAACTCGGGCTAGACAAAGAGCTTTTGGAATC...AGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGAGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 72 bp | CCCCTGTGCTCTGGGAGGCCCCAACACCTGAGGAGATaGCTCTACTCTCTACCAAGAATCCTGGGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLCSGRPQHLRR*LYSLPRILGSE Trigger: TTCACTGCCCAGGATTCTTGGTAGAGAGTAGAGTCATCTCCTCAGGTGTTGGGGCCTCCCAGAGCACAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR GCA 72 bp | CACAGGGTCCCCACATTGGCGATTCCAACTCTCTCTTaGTGGTCACTAGCTGCCAGTCCAGCTGTGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HRVPTLAIPTLS*WSLAASPAVHG Trigger: TCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR CCA 72 bp | TGCCCTTGGCTCCTGAAGATGTCACAGTGGGGATACTaGGAAGGCTTGCCATTGTCCTGCAGAGCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: CPWLLKMSQWGY*EGLPLSCRAPQ Trigger: CTGTGGAGCTCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR CCA 72 bp | AGGGTCCCCACATTGGCGATTCCAACTCTCTCTTGCTaGTCACTAGCTGCCAGTCCAGCTGTGCATGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVPTLAIPTLSC*SLAASPAVHGV Trigger: GACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR CCA 72 bp | GCTTGGTCCTGTAACTACACAGCAAGAGGCTTCATCTaGCCTGCTGCCTCCGTGTCTCATCGAGCCTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: AWSCNYTARGFI*PAASVSHRASP Trigger: TGGTGAGGCTCGATGAGACACGGAGGCAGCAGGCCAGATGAAGCCTCTTGCTGTGTAGTTACAGGACCAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR TCA 72 bp | TGTCCGGTCCCTGCTCCATGGTTCCATCAATGGGCCTaGTCTGAGCCCCAGTCAATCTTCTTGCTTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPVPAPWFHQWA*SEPQSIFLLPG Trigger: TCCTGGAAGCAAGAAGATTGACTGGGGCTCAGATCAGGCCCATTGATGGAACCATGGAGCAGGGACCGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGGGTCACAGGTGTTGGGGGACTCGCCTCTCTGTGTTaGAATCTGGCTTCCCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SHWVVVGCRGLWVTGVGGLASLC*NLASLQ Trigger: TTGTAGGGAAGCCAGATTCAAACACAGAGAGGCGAG...TCCCCCAACACCTGTGACCCATAAGCCTCTGCAACCTACCACTACCCAGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR TCA 72 bp | CAGAGGCTGGCCAGGTCCCCAGGCCTCCCCTTTAAGTaGCTGTCAAATGTGCGTAAATTCTGTGTTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRLARSPGLPFK*LSNVRKFCVQA Trigger: AGCCTGAACACAGAATTTACGCACATTTGACAGTCACTTAAAGGGGAGGCCTGGGGACCTGGCCAGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR TCA 72 bp | TTTCTGCCATCCAGATCCACCTTTGCCCTTGGCTCCTaGAGATGTCACAGTGGGGATACTGGGAAGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLPSRSTFALGS*RCHSGDTGKAC Trigger: GCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | ATCCACCTTTGCCCTTGGCTCCTGAAGATGTCACAGTaGGGATACTGGGAAGGCTTGCCATTGTCCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IHLCPWLLKMSQ*GYWEGLPLSCR Trigger: TCTGCAGGACAATGGCAAGCCTTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR GCA 72 bp | ATTGGCGATTCCAACTCTCTCTTGCTGGTCACTAGCTaGCAGTCCAGCTGTGCATGGAGTCAGAGGTTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: IGDSNSLLLVTS*QSSCAWSQRFR Trigger: ACGAAACCTCTGACTCCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | TCCCTGGACTTAGGCACAGCCATGCTCTGGGACTTATaGAGTGTCACACCTATAAGTGTCAGAGCCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLDLGTAMLWDL*SVTPISVRAFS Trigger: GCTGAAGGCTCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGTGCCTAAGTCCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | CTGGCAGACAGACTCTGGAAGAACACACTCAGTCCATaGAGATTTATGTACATGGGGCAGAGGGGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LADRLWKNTLSP*RFMYMGQRGCL Trigger: CAGACAGCCCCTCTGCCCCATGTACATAAATCTCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | ACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTaGAGACGTCATAGCTCCCGGGATGACCTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLLSHSAVFASS*RRHSSRDDLLS Trigger: AGACAGGAGGTCATCCCGGGAGCTATGACGTCTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR CCA 72 bp | TTAAGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATaGGTCACAGGTGTTGGGGGACTCAGATTTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSHWVVVGCRGL*VTGVGGLRFQQ Trigger: CTGCTGAAATCTGAGTCCCCCAACACCTGTGACCCATAAGCCTCTGCAACCTACCACTACCCAGTGGCTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAGTGTCAGAGCCTTCAGCTTTCCTCAGAAATCTACAATCCACAGGGTCCCCTGGGAAGGCTTGCCATaGTCCTGCAGAGCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ISVRAFSFPQKSTIHRVPWEGLP*SCRAPQ Trigger: CTGTGGAGCTCTGCAGGACAATGGCAAGCCTTCCCA...GGGGACCCTGTGGATTGTAGATTTCTGAGGAAAGCTGAAGGCTCTGACACTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGGGTCACAGGTGTTGGGGGATTCAGGCTCTGGACTTaGAAAAGCTTTGTTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SHWVVVGCRGLWVTGVGGFRLWT*KSFVAV Trigger: AACAGCAACAAAGCTTTTCAAAGTCCAGAGCCTGAA...TCCCCCAACACCTGTGACCCATAAGCCTCTGCAACCTACCACTACCCAGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | CCTCACTTCTCCCTGGACTTAGGCACAGCCATGCTCTaGGACTTATGCAGTGTCACACCTATAAGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHFSLDLGTAML*DLCSVTPISVR Trigger: TCTGACACTTATAGGTGTGACACTGCATAAGTCCCAGAGCATGGCTGTGCCTAAGTCCAGGGAGAAGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGACGTCACATCCAGATCCACCTTaGCCCTTGGCTCCTGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVNTSEPFCCVCFKLETSHPDPP*PLAPED Trigger: ATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATG...TGACGTCTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGACGTCAGATTCCAACTCTCTCTaGCTGGTCACTAGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVNTSEPFCCVCFKLETSDSNSL*LVTSCQ Trigger: CTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATC...TGACGTCTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | TTGCACTTATCGATTTCTGCCATCCAGATCCACCTTTaGCCTTGGCTCCTGAAGATGTCACAGTGGGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LHLSISAIQIHL*PWLLKMSQWGY Trigger: GTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | TTATCGATTTCTGCCATCCAGATCCACCTTTGCCCTTaGCTCCTGAAGATGTCACAGTGGGGATACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSISAIQIHLCP*LLKMSQWGYWE Trigger: TTCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | TCGACTTCTAGCATCTTGTTCCCAGTGAACTTAGAGTaGACTACCCTTTATCTTACCCCCTGTGCTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STSSILFPVNLE*TTLYLTPCALG Trigger: TCCCAGAGCACAGGGGGTAAGATAAAGGGTAGTGCACTCTAAGTTCACTGGGAACAAGATGCTAGAAGTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | CACCCTACCTGCCCTAGATTCCCCAAAGTTACTTCTTaGGGAATTTCCTCTGGAAGTCGACTTCTAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HPTCPRFPKVTS*GISSGSRLLAS Trigger: AGATGCTAGAAGTCGACTTCCAGAGGAAATTCCCCAAGAAGTAACTTTGGGGAATCTAGGGCAGGTAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR GCA 72 bp | AAGGTAGTAGCTCCCATGTCCTGGGCTTCCACTAATTaGACTTATCGATTTCTGCCATCCAGATCCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KVVAPMSWASTN*TYRFLPSRSTF Trigger: AAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAATTAGTGGAAGCCCAGGACATGGGAGCTACTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | TCAGAGGTTTCGTTGGTTGCTCTGGCAGACAGACTCTaGAAGAACACACTCAGTCCATGGAGATTTATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SEVSLVALADRL*KNTLSPWRFMY Trigger: GTACATAAATCTCCATGGACTGAGTGTGTTCTTCCAGAGTCTGTCTGCCAGAGCAACCAACGAAACCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCTCTACAGTAGTTTTCTTTATGGTAAAGGGTGCTCCTGGCCTCAGACCTATTACAACAGATAGCTaGGGTCTGTTTTCTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EGSTVVFFMVKGAPGLRPITTDS*GLFSLS Trigger: GGACAGAGAAAACAGACCCAAGCTATCTGTTGTAAT...AGGTCTGAGGCCAGGAGCACCCTTTACCATAAAGAAAACTACTGTAGAGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTTGGGATTTAATTAAGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGCCCCAGTCAATCTTCTaGCTTCCAGGAAATCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPWDLIKPLGSGRLQRLMPQSIF*LPGNHG Trigger: ACCATGATTTCCTGGAAGCAAGAAGATTGACTGGGG...CATAAGCCTCTGCAACCTACCACTACCCAGTGGCTTAATTAAATCCCAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR TCA 72 bp | GAGATGACTCTACTCTCTACCAAGAATCCTGGGCAGTaGAGGCTCTACAGTAGTTTTCTTTATGGTAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EMTLLSTKNPGQ*RLYSSFLYGKG Trigger: CCCTTTACCATAAAGAAAACTACTGTAGAGCCTTCACTGCCCAGGATTCTTGGTAGAGAGTAGAGTCATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | TTCACAGGATATCCCTACAAATTACAACAGATAGCTTaGGTCTGTTTTCTCTGTCCTCACTTCTCCCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FTGYPYKLQQIA*VCFLCPHFSLD Trigger: GTCCAGGGAGAAGTGAGGACAGAGAAAACAGACCCAAGCTATCTGTTGTAATTTGTAGGGATATCCTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CCA 72 bp | GACTGTCAAATGTGCGTAAATTCTGTGTTCAGGCTCTaGACTTTGAAAAGCTTTGTTGCTGTTGGATTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DCQMCVNSVFRL*TLKSFVAVGFW Trigger: CCAAAATCCAACAGCAACAAAGCTTTTCAAAGTCCAGAGCCTGAACACAGAATTTACGCACATTTGACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCTCGTGCTGCCGGATaGGCGCCTCGCGCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVARAAG*APRAAP Trigger: AGGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | TCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGTCCTCTGGCTGGCACTCAGTaGCTCACTGGCCCTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRDDLLSGQPLFRPEHCPLAGTQ*LTGPPP Trigger: GGGCGGAGGGCCAGTGAGGCACTGAGTGCCAGCCAG...AGGACAGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCGGTGTGGCGACGCTaGTCCTGCTCGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVAVWRR*SCSRSS Trigger: GCTGGAGCGCGAGCAGGAGCAGCGTCGCCACACCGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCCTCCTGCTCGTGCTaGCGGATGAGCGCCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVASCSC*RMSASR Trigger: GCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCTTGGCGGTCCGCGCTaGCTCCTGCTCGTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLGGPR*LLLVLP Trigger: CGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCTGCCTCCTGCTCGTaGTGCCGGATGAGCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVAASCS*CRMSAS Trigger: CGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGTCCGCGCTGCCTCCTaGTCGTGCTGCCGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVVRAAS*SCCRMS Trigger: GCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGAC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGCCATCAAAGGTCCTaGGCGCCTCCTCGCGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRHQRS*APPRAR Trigger: ACGCGCGCGAGGAGGCGCGCAGGACCTTTGATGGCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGGTGCACCTCATCCTaGTGCGCCTGGTACGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRCTSS*CAWYAA Trigger: CGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCTCTTCCGGCGTGGCTaGGGTCCGGTCTGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLFRRG*GPVCPV Trigger: GACAGGACAGACCGGACCCCAGCCACGCCGGAAGAG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAGTCCTCTTCCGGCGTaGCTGGGGTCCGGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSPLPA*LGSGLS Trigger: GGACAGACCGGACCCCAGCCACGCCGGAAGAGGACT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCCTCGCGCAGCGCCTaGAGTTCCTTCGTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVASRSA*SSFVFS Trigger: GGAGAAGACGAAGGAACTGCAGGCGCTGCGCGAGGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCCCGCTTGATGCGGTaGACCTCATCCTGGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSRLMR*TSSWCA Trigger: GGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCAGCACATTCAGCGTaGCCTGCAGCCGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVAAHSA*PAAAAA Trigger: AGCTGCAGCGGCTGCAGGCCACGCTGAATGTGCTGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCCTGCTGCAGCCGCTaGCGCTCGCCATCAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSCCSR*RSPSKV Trigger: GACCTTTGATGGCGAGCGCCAGCGGCTGCAGCAGGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGTGCAGCTTGGCCTTaGGTTCCGAGATGTAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRAAWP*VPRCRR Trigger: CCGCCTACATCTCGGAACTCAAGGCCAAGCTGCACG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGTTCGCACTCCCGCTTaGTGCGGTGCACCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVVRTPA*CGAPHP Trigger: AGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAAC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGTGGCCTGCAGCCGCTaGAGCTCACCTTCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVVACSR*SSPSLI Trigger: GATCAAGGAAGGTGAGCTGCAGCGGCTGCAGGCCAC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCTGTGGTGGCGTTCTaGCTCCTTGACCTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVAVVAF*LLDLDQ Trigger: CTGGTCCAGGTCAAGGAGGCAGAACGCCACCACAGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCCCTCGATGCCTCTTaGAGCGCAGCAGGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSLDAS*SAAGVL Trigger: GAGAACGCCTGCTGCGCTCCAAGAGGCATCGAGGGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCCTCGATTTTGGCCTaGCACCTCAGCAGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSSILA*HLSRSA Trigger: GGCCGACCTGCTGAGGTGCCAGGCCAAAATCGAGGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCCGCTCCTTCCCTTTaGTCTCGTCCATCAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPAPSL*SRPSVC Trigger: GCAGACTGATGGACGAGATCAAAGGGAAGGAGCGGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAGTCTTGACTTTGTCTaGGGCGCCATCGCGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSLDFV*GAIAQH Trigger: GTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCGCCATGTCACCAATaGCAGGAGGAAGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPPCHQ*QEEAPS Trigger: AGAGGGAGCTTCCTCCTGGCATTGGTGACATGGCGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCTCCATCCTCTGGATaGTGTGCAGCAGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPPSSG*CAAAPR Trigger: ACGAGGAGCTGCTGCACAGCATCCAGAGGATGGAGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTTGGGCTGCTGTGGTaGCGTTCTGCCTCCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVFGLLW*RSASLT Trigger: GGTCAAGGAGGCAGAACGCCACCACAGCAGCCCAAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCTCTTTGGGCTGCTGTaGTGGCGTTCTGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLFGLL*WRSASL Trigger: CAAGGAGGCAGAACGCCACCACAGCAGCCCAAAGAG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCTGCATGCAGTTACTaGGTGCCTCTTCCGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPACSY*VPLPPV Trigger: AACAGGCGGAAGAGGCACTCAGTAACTGCATGCAGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | AGCCACTGGGTAGTGGTAGGTTGCAGAGGCTTATGGGTCACAGGTGTTGGGGGAGACGCAGCAGCTGTCTaGGCACCTTCTCTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHWVVVGCRGLWVTGVGGDAAAV*APSLLL Trigger: CAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTC...TCCCCCAACACCTGTGACCCATAAGCCTCTGCAACCTACCACTACCCAGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAACTTAGAGTGCACTACCCTTTATCTTACCCCCTGTGCTCTGGGAGGCCCTTCAGCTGGCGCCTCTaGAGCTCCAGCTTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SELRVHYPLSYPLCSGRPFSWRL*SSSLPS Trigger: GGAGGGCAAGCTGGAGCTGCAGAGGCGCCAGCTGAA...GGGCCTCCCAGAGCACAGGGGGTAAGATAAAGGGTAGTGCACTCTAAGTTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCTGCCTCCTTGACCTaGACCAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSASLT*TSCSSR Trigger: TCTGGATGAGCAGCTGGTCCAGGTCAAGGAGGCAGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCACAACATGCTTCTTaGGGGGCTTCAGGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPQHAS*GASGSS Trigger: GGAAGAGCCTGAAGCCCCCCAAGAAGCATGTTGTGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| 3UTR CAA 72 bp | CCACAGGGTCCCCACATTGGCGATTCCAACTCTCTCTaGCTGGTCACTAGCTGCCAGTCCAGCTGTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGPHIGDSNSL*LVTSCQSSCAW Trigger: CCATGCACAGCTGGACTGGCAGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGCTCATCCATATGTTaGTCCTGGCCACCCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRSSIC*SWPPIS Trigger: GCTTATGGGTGGCCAGGATCAACATATGGATGAGCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGCTTTAGCGAGGCCTaGGCAGACAGCTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRFSEA*ADSFSF Trigger: GAAAGAAAAGCTGTCTGCTCAGGCCTCGCTAAAGCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGAGAGAGGTCATCGATaGCATGCTGCTGTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVERGHR*HAAVPA Trigger: TGCTGGAACAGCAGCATGTCATCGATGACCTCTCTC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCATGCAGTTACTGAGTaGCTCTTCCGCCTGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVHAVTE*LFRLFA Trigger: CGCAAACAGGCGGAAGAGGCACTCAGTAACTGCATG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCTCGTCCATCAGTCTaGGGATGTCACGTTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSRPSV*GCHVRT Trigger: AGTGCGAACGTGACATCCGCAGACTGATGGACGAGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGCTGTTCCAGCACCTaGAGCCTCAGGAACTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVCCSST*SLRNSI Trigger: GATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCATCGATGACATGCTaGTGTTCCAGCACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSSMTC*CSSTCS Trigger: GCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAGGTCATCGATGACATaGTGCTGTTCCAGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRSSMT*CCSSTC Trigger: GCAGGTGCTGGAACAGCAGCATGTCATCGATGACCT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGTCCTCATGAGTACCTaGTTCTCCTCTACCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVVLMST*FSSTHA Trigger: TGCGTGGGTAGAGGAGAAGCAGGTACTCATGAGGAC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGACTCAATCTGGATGTTaGTCAGCTTGGCGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVTQSGC*SAWRAA Trigger: AGCTGCGCGCCAAGCTGACCAACATCCAGATTGAGT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCTAAGTCCTCGATTTTaGCCTGGCACCTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLSPRF*PGTSAG Trigger: ACCTGCTGAGGTGCCAGGCCAAAATCGAGGACTTAG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGCTCGTTCTGGTCCTTaGCGTCTTGCATTTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVARSGP*RLAFRS Trigger: AGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCTGGTTTGTCCTCATaGGTACCTGCTTCTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPGLSS*VPASPL Trigger: TAGAGGAGAAGCAGGTACTCATGAGGACAAACCAGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGATCCTCTGGATGCTGTaGAGCAGCTCCTCGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVILWML*SSSSFF Trigger: AAAGAACGAGGAGCTGCTGCACAGCATCCAGAGGAT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGGTCCTTGGCGTCTTaGATTTCGCTCTTTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVWSLAS*ISLFSW Trigger: CCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGCTGGAACTCAATCTaGATGTTGGTCAGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVCWNSI*MLVSLA Trigger: CGCCAAGCTGACCAACATCCAGATTGAGTTCCAGCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGCGCTCCCGCAGGATCTaGCTGTCAAACTCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRVNTSEPFCCVCFKLERSRRI*LSNSRL Trigger: GAGCCGGGAGTTTGACAGCCAGATCCTGCGGGAGCG...CTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| 3UTR CAA 72 bp | TCTTCCGTCCAGAGCACTGTCCTCGCCTCTCTGTGTTaGAATCTGGCTTCCCTACAATGTCCGGTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVQSTVLASLC*NLASLQCPVPA Trigger: AGCAGGGACCGGACATTGTAGGGAAGCCAGATTCAAACACAGAGAGGCGAGGACAGTGCTCTGGACGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGGTCAGCCTCTTCTCTaGTTGTGGTCTCATCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVGQPLL*LWSHLS Trigger: ACTTAGATGAGACCACAACCAGAGAAGAGGCTGACC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCTAACAGCTCGTTCTaGTCCTTGGCGTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSNSSF*SLASCI Trigger: AATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCAGCAATTTTCAGTTaGAATCGCCTCACATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSAIFS*NRLTSR Trigger: GCGAGATGTGAGGCGATTTCAACTGAAAATTGCTGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGAGTTCTAGCACTCTaGATTCTAACAGCTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRVLAL*ILTARS Trigger: AGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTGCTCTTCTCCTGCTaGAACTCAATCTGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLLFSC*NSIWML Trigger: CAACATCCAGATTGAGTTCCAGCAGGAGAAGAGCAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCCTCTTCTCTGGTTGTaGTCTCATCTAAGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVPLLWL*SHLSPL Trigger: AAGAGGACTTAGATGAGACCACAACCAGAGAAGAGG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS-3UTR TCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAATGTCTGCTCCGTTTaGGAGCTTACAACAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVNVCSV*ELTTDR Trigger: TCTATCTGTTGTAAGCTCTCAAACGGAGCAGACATT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS-3UTR GCA 90 bp | AAGTGTCAGAGCCTTCAGCTTTCCTCAGAAATCTACAATCCACAGGGTCCCCACTCTGCAGCTCCAGCTTaGCCTCCATCTCCCGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KCQSLQLSSEIYNPQGPHSAAPA*PPSPGF Trigger: AAATCCGGGAGATGGAGGGCAAGCTGGAGCTGCAGA...GTGGGGACCCTGTGGATTGTAGATTTCTGAGGAAAGCTGAAGGCTCTGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGAGTCAACACTTCTGAGCCATTCTGCTGTGTTTGCTTCAAGCTGGAGTCCCGGATTTTCTGCTaGGCTTGCTGTAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QQRVNTSEPFCCVCFKLESRIFC*ACCSSS Trigger: GGAGCTGCTACAGCAAGCCCAGCAGAAAATCCGGGA...CTCCAGCTTGAAGCAAACACAGCAGAATGGCTCAGAAGTGTTGACTCTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGTTCTTTTTGTTCATaGGTTTGTTCTTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRSFCS*VCSSPP Trigger: TGGTGGAGAAGAACAAACGCATGAACAAAAAGAACG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR GCA 90 bp | TATAAGTGTCAGAGCCTTCAGCTTTCCTCAGAAATCTACAATCCACAGGGTCCCCACCTTCTCTACTGCTaGCTGGAGGTCCTCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: YKCQSLQLSSEIYNPQGPHLLYC*LEVLTL Trigger: CAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTG...GGGACCCTGTGGATTGTAGATTTCTGAGGAAAGCTGAAGGCTCTGACACTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | CTTATCGATTTCTGCCATCCAGATCCACCTTTGCCCTaGGCTCCTGAAGATGTCACAGTGGGGATACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LIDFCHPDPPLP*APEDVTVGILG Trigger: TCCCAGTATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | AGTTTGAAAGAGTATAGCCACATAGGCAAGTTCCTTTaGGAGGTTCCCCACCCTACCTGCCCTAGATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLKEYSHIGKFL*EVPHPTCPRFP Trigger: GGGGAATCTAGGGCAGGTAGGGTGGGGAACCTCCAAAAGGAACTTGCCTATGTGGCTATACTCTTTCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTGGGCTTCCACTAATTGCACTTATCGATTTCTGCCATCCAGATCCACCTATTTTCTGCTGGGCTTaGTGTAGCAGCTCCATTCGC | + |
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Preference number: 4 (lower is better) Translates to: CPGLPLIALIDFCHPDPPIFCWA*CSSSIR Trigger: GCGAATGGAGCTGCTACAGCAAGCCCAGCAGAAAAT...AGGTGGATCTGGATGGCAGAAATCGATAAGTGCAATTAGTGGAAGCCCAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | ATTGCACTTATCGATTTCTGCCATCCAGATCCACCTTaGCCCTTGGCTCCTGAAGATGTCACAGTGGGGATA | + |
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Preference number: 4 (lower is better) Translates to: IALIDFCHPDPP*PLAPEDVTVGI Trigger: TATCCCCACTGTGACATCTTCAGGAGCCAAGGGCAAAGGTGGATCTGGATGGCAGAAATCGATAAGTGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | TTTCCTCAGAAATCTACAATCCACAGGGTCCCCACATaGGCGATTCCAACTCTCTCTTGCTGGTCACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPQKSTIHRVPT*AIPTLSCWSLA Trigger: AGCTAGTGACCAGCAAGAGAGAGTTGGAATCGCCAATGTGGGGACCCTGTGGATTGTAGATTTCTGAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | CTTCACAGGATATCCCTACAAATTACAACAGATAGCTaGGGTCTGTTTTCTCTGTCCTCACTTCTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRISLQITTDS*GLFSLSSLLPG Trigger: TCCAGGGAGAAGTGAGGACAGAGAAAACAGACCCAAGCTATCTGTTGTAATTTGTAGGGATATCCTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | TTGGGGAATTTCCTCTGGAAGTCGACTTCTAGCATCTaGTTCCCAGTGAACTTAGAGTGCACTACCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: LGNFLWKSTSSI*FPVNLECTTLY Trigger: ATAAAGGGTAGTGCACTCTAAGTTCACTGGGAACAAGATGCTAGAAGTCGACTTCCAGAGGAAATTCCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| 3UTR CAA 72 bp | GTCAATCTGATGGCTAACATTCTCTCCACCCCAAGTTaGAAAGAGTATAGCCACATAGGCAAGTTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VNLMANILSTPS*KEYSHIGKFLL Trigger: CAAAAGGAACTTGCCTATGTGGCTATACTCTTTCAAACTTGGGGTGGAGAGAATGTTAGCCATCAGATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS GCA 90 bp | GCGGTGTGGCGACGCTGCTCCTGCTCGCGCTCCAGCTTGGCCTCCTaGAGACGCTCCCGCAGCTTCCCCACCTTGCTCTTCTCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AVWRRCSCSRSSLAS*RRSRSFPTLLFSCW Trigger: CCAGCAGGAGAAGAGCAAGGTGGGGAAGCTGCGGGAGCGTCTGCAGGAGGCCAAGCTGGAGCGCGAGCAGGAGCAGCGTCGCCACACCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 ENSMUST00000174097.8 |
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| CDS GCA 90 bp | CGCTGCAGCTCACCTTCCTTGATCTTGGCGGTCCGCGCTGCCTCCTaGTCGTGCTGCCGGATGAGCGCCTCGCGCAGCGCCTGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RCSSPSLILAVRAAS*SCCRMSASRSACSS Trigger: GGAACTGCAGGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCAGCG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CCA 90 bp | CGTTCGCACTCCCGCTTGATGCGGTGCACCTCATCCTGGTGCGCCTaGTACGCAGCGCGCAGGTCGGCGGCTTTGGCCTTGTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSHSRLMRCTSSWCA*YAARRSAALALSAC Trigger: GCAGGCAGACAAGGCCAAAGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS TCA 90 bp | AGGTCCTGCGCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAGTCTTaGCTTTGTCTGCGGCGCCATCGCGCAGCACATTCAGCGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCAPPRARRPAMQS*LCLRRHRAAHSAWP Trigger: AGGCCACGCTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAGGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 90 bp | AGCTCACCTTCCTTGATCTTGGCGGTCCGCGCTGCCTCCTGCTCGTaGTGCCGGATGAGCGCCTCGCGCAGCGCCTGCAGTTCCTTCGTC | + |
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Preference number: 5 (lower is better) Translates to: SSPSLILAVRAASCS*CRMSASRSACSSFV Trigger: GACGAAGGAACTGCAGGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CCA 90 bp | CGGATGTCACGTTCGCACTCCCGCTTGATGCGGTGCACCTCATCCTaGTGCGCCTGGTACGCAGCGCGCAGGTCGGCGGCTTTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RMSRSHSRLMRCTSS*CAWYAARRSAALAL Trigger: CAAGGCCAAAGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS GCA 90 bp | TCCATCAGTCTGCGGATGTCACGTTCGCACTCCCGCTTGATGCGGTaGACCTCATCCTGGTGCGCCTGGTACGCAGCGCGCAGGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SISLRMSRSHSRLMR*TSSWCAWYAARRSA Trigger: CGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCGCAGACTGATGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS GCA 90 bp | CTCCCGGCTCTGACGCAGCAGCTGTCTGCGCACCTTCTCTACTGCTaGCTGGAGGTCCTCACGCTGGCTGGCACTCAGTGCCTCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: LPALTQQLSAHLLYC*LEVLTLAGTQCLTG Trigger: GCCAGTGAGGCACTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAGAGCCGGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS CCA 90 bp | CTGCTGCCTGGAGGTCCTCACGCTGGCTGGCACTCAGTGCCTCACTaGCCCTCCGCCCTGGCTCCTGCTGCAGTGCATTGTACAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLPGGPHAGWHSVPH*PSALAPAAVHCTRW Trigger: CCACCTTGTACAATGCACTGCAGCAGGAGCCAGGGCGGAGGGCCAGTGAGGCACTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 90 bp | GCCATCAAAGGTCCTGCGCGCCTCCTCGCGCGCGTCGGCCAGCAATaGAGTCTTGACTTTGTCTGCGGCGCCATCGCGCAGCACATTCAG | + |
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Preference number: 5 (lower is better) Translates to: AIKGPARLLARVGQQ*SLDFVCGAIAQHIQ Trigger: CTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAGGACCTTTGATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 90 bp | ATGTCACGTTCGCACTCCCGCTTGATGCGGTGCACCTCATCCTGGTaGGCCTGGTACGCAGCGCGCAGGTCGGCGGCTTTGGCCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: MSRSHSRLMRCTSSW*AWYAARRSAALALS Trigger: AGACAAGGCCAAAGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS TCA 90 bp | CGCGCAGGTCGGCGGCTTTGGCCTTGTCTGCCTGCATGCAGTTACTaGGTGCCTCTTCCGCCTGTTTGCGCGCAGCCTTCAGCTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RAGRRLWPCLPACSY*VPLPPVCAQPSAPG Trigger: TCCTGGAGCTGAAGGCTGCGCGCAAACAGGCGGAAGAGGCACTCAGTAACTGCATGCAGGCAGACAAGGCCAAAGCCGCCGACCTGCGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS GCA 90 bp | GCAGGATCTGGCTGTCAAACTCCCGGCTCTGACGCAGCAGCTGTCTaGGCACCTTCTCTACTGCTGCCTGGAGGTCCTCACGCTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AGSGCQTPGSDAAAV*APSLLLPGGPHAGW Trigger: CCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAGAGCCGGGAGTTTGACAGCCAGATCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGCTCGCGCTCCAGCTaGGCCTCCTGCAGACGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVCSRSS*ASCRRS Trigger: GGAGCGTCTGCAGGAGGCCAAGCTGGAGCGCGAGCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS GCA 90 bp | GGCACTCAGTGCCTCACTGGCCCTCCGCCCTGGCTCCTGCTGCAGTaGATTGTACAAGGTGGCCTCCAGGTCCTGGATTTTCAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTQCLTGPPPWLLLQ*IVQGGLQVLDFQVG Trigger: GCCTACCTGAAAATCCAGGACCTGGAGGCCACCTTGTACAATGCACTGCAGCAGGAGCCAGGGCGGAGGGCCAGTGAGGCACTGAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 90 bp | AAACTCCCGGCTCTGACGCAGCAGCTGTCTGCGCACCTTCTCTACTaGTGCCTGGAGGTCCTCACGCTGGCTGGCACTCAGTGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: KLPALTQQLSAHLLY*CLEVLTLAGTQCLT Trigger: AGTGAGGCACTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAGAGCCGGGAGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGCAGGTCGGCGGCTTaGGCCTTGTCTGCCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRRSAA*ALSACM Trigger: CATGCAGGCAGACAAGGCCAAAGCCGCCGACCTGCG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | TCCCGGGATGACCTCCTGTCTGGACAGCCCCTCTTCCGTCCAGAGCACTGTCCTCTCTGCAGCTCCAGCTaGCCCTCCATCTCCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SRDDLLSGQPLFRPEHCPLCSSS*PSISRI Trigger: AATCCGGGAGATGGAGGGCAAGCTGGAGCTGCAGAG...AGGACAGTGCTCTGGACGGAAGAGGGGCTGTCCAGACAGGAGGTCATCCCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208852.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCGTTCGCACTCCCGCTaGATGCGGTGCACCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVRSHSR*MRCTSS Trigger: GGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS TCA 90 bp | CACCAAGCTCCTTCTCCAGGGCCAGGATCACCCGCTCCTTCCCTTTaGTCTCGTCCATCAGTCTGCGGATGTCACGTTCGCACTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQAPSPGPGSPAPSL*SRPSVCGCHVRTPA Trigger: AGCGGGAGTGCGAACGTGACATCCGCAGACTGATGGACGAGATCAAAGGGAAGGAGCGGGTGATCCTGGCCCTGGAGAAGGAGCTTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CCA 90 bp | CATAAGCTCCGCCATGTCACCAATGCCAGGAGGAAGCTCCCTCTTTaGGCTGCTGTGGTGGCGTTCTGCCTCCTTGACCTGGACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKLRHVTNARRKLPL*AAVVAFCLLDLDQL Trigger: CAGCTGGTCCAGGTCAAGGAGGCAGAACGCCACCACAGCAGCCCAAAGAGGGAGCTTCCTCCTGGCATTGGTGACATGGCGGAGCTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000174629.2 |
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| CDS CCA 90 bp | CAGCCTCTTCTCTGGTTGTGGTCTCATCTAAGTCCTCTTCCGGCGTaGCTGGGGTCCGGTCTGTCCTGTCCGTGTTGTAGGACGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLLWLWSHLSPLPA*LGSGLSCPCCRTSR Trigger: CCGAGACGTCCTACAACACGGACAGGACAGACCGGACCCCAGCCACGCCGGAAGAGGACTTAGATGAGACCACAACCAGAGAAGAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGCAGCTCACCTTCCTaGATCTTGGCGGTCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVCSSPS*ILAVRA Trigger: AGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGCTGGGTCTGCCCGGTTaGCACACCAAGCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVLGLPG*HTKLLL Trigger: GAGAAGGAGCTTGGTGTGCAAACCGGGCAGACCCAG...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTGGCGTTCTGCCTCCTaGACCTGGACCAGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVWRSAS*TWTSCS Trigger: TGAGCAGCTGGTCCAGGTCAAGGAGGCAGAACGCCA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGGAGGAAGCTCCCTCTTaGGGCTGCTGTGGTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVEEAPS*GCCGGV Trigger: AACGCCACCACAGCAGCCCAAAGAGGGAGCTTCCTC...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTCCCTCGATGCCTCTaGGAGCGCAGCAGGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVFPRCL*ERSRRS Trigger: AGAACGCCTGCTGCGCTCCAAGAGGCATCGAGGGAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS TCA 90 bp | CCTGCAGCCTCAGGAACTCTATCTCCTGCTCGTCCCTGGTCAGACTaGGGTCATTCAGGGACGTGTGTCGCTTTAGCGAGGCCTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAASGTLSPARPWSD*GHSGTCVALARPEQ Trigger: CTGCTCAGGCCTCGCTAAAGCGACACACGTCCCTGAATGACCTCAGTCTGACCAGGGACGAGCAGGAGATAGAGTTCCTGAGGCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCGGCGGCTTTGGCCTaGTCTGCCTGCATGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSAALA*SACMQL Trigger: TAACTGCATGCAGGCAGACAAGGCCAAAGCCGCCGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCCCTCGTGAGGCTCTaGAGCTTCTCCTCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSLVRL*SFSSIL Trigger: GAGGATGGAGGAGAAGCTCAAGAGCCTCACGAGGGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS GCA 90 bp | CGCAGCAGGCGTTCTCTCTCCAGAGAGAGGTCATCGATGACATGCTaGTGTTCCAGCACCTGCAGCCTCAGGAACTCTATCTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSRRSLSRERSSMTC*CSSTCSLRNSISCS Trigger: CGAGCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGGAGAGAGAACGCCTGCTGCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 |
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| CDS GCA 90 bp | GAGCGCAGCAGGCGTTCTCTCTCCAGAGAGAGGTCATCGATGACATaGTGCTGTTCCAGCACCTGCAGCCTCAGGAACTCTATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERSRRSLSRERSSMT*CCSSTCSLRNSISC Trigger: GCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGGAGAGAGAACGCCTGCTGCGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAACTCAATCTGGATGTaGGTCAGCTTGGCGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVNSIWM*VSLARS Trigger: GCTGCGCGCCAAGCTGACCAACATCCAGATTGAGTT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTCTCCTCGTGCAGCTaGGCCTTGAGTTCCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVFSSCS*ALSSEM Trigger: CATCTCGGAACTCAAGGCCAAGCTGCACGAGGAGAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTCTAAGTCCTCGATTTaGGCCTGGCACCTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSKSSI*AWHLSR Trigger: CCTGCTGAGGTGCCAGGCCAAAATCGAGGACTTAGA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAGCTCGTTCTGGTCCTaGGCGTCTTGCATTTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSSFWS*ASCISL Trigger: GAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS GCA 90 bp | CTCTCCAGAGAGAGGTCATCGATGACATGCTGCTGTTCCAGCACCTaGAGCCTCAGGAACTCTATCTCCTGCTCGTCCCTGGTCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRERSSMTCCCSST*SLRNSISCSSLVRL Trigger: CAGTCTGACCAGGGACGAGCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 |
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| CDS CCA 90 bp | AACAGCTGGAGGGCGCTGCTGTTGTTCTCGGGGAAGGTGGTGATTTaGAGGTTAAAGGCTGGCGACCTCCGCTCTCTCTCTTCGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSWRALLLFSGKVVI*RLKAGDLRSLSSSS Trigger: AGAACTCGAAGAGAGAGAGCGGAGGTCGCCAGCCTTTAACCTCCAAATCACCACCTTCCCCGAGAACAACAGCAGCGCCCTCCAGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 90 bp | TGCTTCAGAGAGAGGTCATCGATGACATGCTGCTGTTCCAGCACCTaGAGCCTCAGGAACTCTATCTCCTGCTCGTCCCTGGTCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CFRERSSMTCCCSST*SLRNSISCSSLVRL Trigger: CAGTCTGACCAGGGACGAGCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS TCA 90 bp | GTCAGACTGAGGTCATTCAGGGACGTGTGTCGCTTTAGCGAGGCCTaGGCAGACAGCTTTTCTTTCATCTCCACGTTCTCCCTCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRLRSFRDVCRFSEA*ADSFSFISTFSLVR Trigger: CCTCACGAGGGAGAACGTGGAGATGAAAGAAAAGCTGTCTGCTCAGGCCTCGCTAAAGCGACACACGTCCCTGAATGACCTCAGTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 90 bp | TTCTTTTTGTTCATGCGTTTGTTCTTCTCCACCAGCGGCTTCAGCTaGACCTCCGTCTCCCGAGAGCGCTTCAGCAGTTCGTTCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FFLFMRLFFSTSGFS*TSVSRERFSSSFLS Trigger: CGAGAGGAACGAACTGCTGAAGCGCTCTCGGGAGACGGAGGTGCAGCTGAAGCCGCTGGTGGAGAAGAACAAACGCATGAACAAAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTTTTGTTCATGCGTTaGTTCTTCTCCACCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVFLFMR*FFSTSG Trigger: GCCGCTGGTGGAGAAGAACAAACGCATGAACAAAAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS GCA 90 bp | AATGTCTCCACAACATGCTTCAGAGAGAGGTCATCGATGACATGCTaGTGTTCCAGCACCTGCAGCCTCAGGAACTCTATCTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NVSTTCFRERSSMTC*CSSTCSLRNSISCS Trigger: CGAGCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGAAGCATGTTGTGGAGACATT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTTCAGCAATTTTCAGTaGAAATCGCCTCACATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVFSNFQ*KSPHIS Trigger: CGAGATGTGAGGCGATTTCAACTGAAAATTGCTGAA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGAGCTCCTCGTTCTTTTaGTTCATGCGTTTGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVSSSFF*FMRLFF Trigger: GAAGAACAAACGCATGAACAAAAAGAACGAGGAGCT...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043794.11 |
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| CDS GCA 90 bp | AAAAATGTCTCCACAACATGCTTCAGAGAGAGGTCATCGATGACATaGTGCTGTTCCAGCACCTGCAGCCTCAGGAACTCTATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNVSTTCFRERSSMT*CCSSTCSLRNSISC Trigger: GCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGAAGCATGTTGTGGAGACATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCACAGACGTCGCAAGCATCCTCCCCAGGACACGTTAAGGCAGTGTACATGAATTTCAGTTaGGGCTCAAAGAGAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQTSQASSPGHVKAVYMNFS*GSKRMS Trigger: AGACATTCTCTTTGAGCCCAAACTGAAATTCATGTA...CACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGTCTGTGGACCTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS CCA 90 bp | TCTCTCTCTTCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTaGTCCTTGGCGTCTTGCATTTCGCTCTTTAGCTGGTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSSSTLNSNSSF*SLASCISLFSWFSS Trigger: GGAGGAGAACCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 90 bp | CAGCCACTTTTCACAGAGGGCAAGCACAGTTCCCGCTTGGATTACTaGAACCTGCTCTTCATTCCTCAAATTCCCATTATCGCCAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPLFTEGKHSSRLDY*NLLFIPQIPIIAKN Trigger: ATTCTTGGCGATAATGGGAATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAAAAGTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CCA 90 bp | TCTCTTACTTCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTaGTCCTTGGCGTCTTGCATTTCGCTCTTTAGCTGGTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLTSSSSTLNSNSSF*SLASCISLFSWFSS Trigger: GGAGGAGAACCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAGTAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS CCA 90 bp | ATCTGCTTCAGCCACTTTTCACAGAGGGCAAGCACAGTTCCCGCTTaGATTACTGCAACCTGCTCTTCATTCCTCAAATTCCCATTATCG | + |
|
Preference number: 5 (lower is better) Translates to: ICFSHFSQRASTVPA*ITATCSSFLKFPLS Trigger: CGATAATGGGAATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAAAAGTGGCTGAAGCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | CCTGCTGCAGCCGCTGGCGCTCGCCATCAAAGGTCCTaGGCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAAAAGARHQRS*APPRARRPAMQ Trigger: CTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAGGACCTTTGATGGCGAGCGCCAGCGGCTGCAGCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 |
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| CDS GCA 72 bp | TTGATCTTGGCGGTCCGCGCTGCCTCCTGCTCGTGCTaGCGGATGAGCGCCTCGCGCAGCGCCTGCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LILAVRAASCSC*RMSASRSACSS Trigger: GGAACTGCAGGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | TCCTTGATCTTGGCGGTCCGCGCTGCCTCCTGCTCGTaGTGCCGGATGAGCGCCTCGCGCAGCGCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLILAVRAASCS*CRMSASRSACS Trigger: ACTGCAGGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | TCACCTTCCTTGATCTTGGCGGTCCGCGCTGCCTCCTaGTCGTGCTGCCGGATGAGCGCCTCGCGCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSLILAVRAAS*SCCRMSASRSA Trigger: GGCGCTGCGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | GGTCCTGCGCGCCTCCTCGCGCGCGTCGGCCAGCAATaGAGTCTTGACTTTGTCTGCGGCGCCATCGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPARLLARVGQQ*SLDFVCGAIAQ Trigger: CTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CCA 72 bp | CGTTCGCACTCCCGCTTGATGCGGTGCACCTCATCCTaGTGCGCCTGGTACGCAGCGCGCAGGTCGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSHSRLMRCTSS*CAWYAARRSAA Trigger: AGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CAA 90 bp | CTGCGCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAGTCTTGACTTaGTCTGCGGCGCCATCGCGCAGCACATTCAGCGTGGCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRASSRASASNAVLT*SAAPSRSTFSVACS Trigger: GCTGCAGGCCACGCTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | CTGCAGCTCACCTTCCTTGATCTTGGCGGTCCGCGCTaGCTCCTGCTCGTGCTGCCGGATGAGCGCCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LQLTFLDLGGPR*LLLVLPDERLA Trigger: CGCGAGGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCAG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | TCGCACTCCCGCTTGATGCGGTGCACCTCATCCTGGTaGGCCTGGTACGCAGCGCGCAGGTCGGCGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SHSRLMRCTSSW*AWYAARRSAAL Trigger: CAAAGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CCA 72 bp | TCCCGCTTGATGCGGTGCACCTCATCCTGGTGCGCCTaGTACGCAGCGCGCAGGTCGGCGGCTTTGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRLMRCTSSWCA*YAARRSAALAL Trigger: CAAGGCCAAAGCCGCCGACCTGCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CAA 90 bp | ACATTCAGCGTGGCCTGCAGCCGCTGCAGCTCACCTTCCTTGATCTaGGCGGTCCGCGCTGCCTCCTGCTCGTGCTGCCGGATGAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFSVACSRCSSPSLI*AVRAASCSCCRMSA Trigger: GGCGCTCATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCAGCGGCTGCAGGCCACGCTGAATGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CAA 90 bp | CGCAGCACATTCAGCGTGGCCTGCAGCCGCTGCAGCTCACCTTCCTaGATCTTGGCGGTCCGCGCTGCCTCCTGCTCGTGCTGCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RSTFSVACSRCSSPS*ILAVRAASCSCCRM Trigger: CATCCGGCAGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCAGCGGCTGCAGGCCACGCTGAATGTGCTGCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CAA 90 bp | AAGGTCCTGCGCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAGTCTaGACTTTGTCTGCGGCGCCATCGCGCAGCACATTCAGCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVLRASSRASASNAV*TLSAAPSRSTFSVA Trigger: GGCCACGCTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCGCAGGACCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS TCA 72 bp | TCAGCGTGGCCTGCAGCCGCTGCAGCTCACCTTCCTTaGTCTTGGCGGTCCGCGCTGCCTCCTGCTCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAWPAAAAAHLP*SWRSALPPARA Trigger: AGCACGAGCAGGAGGCAGCGCGGACCGCCAAGATCAAGGAAGGTGAGCTGCAGCGGCTGCAGGCCACGCTGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | CTGCGGATGTCACGTTCGCACTCCCGCTTGATGCGGTaGACCTCATCCTGGTGCGCCTGGTACGCAGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRMSRSHSRLMR*TSSWCAWYAAR Trigger: GCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CAA 72 bp | CGCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAGTCTaGACTTTGTCTGCGGCGCCATCGCGCAGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: RASSRASASNAV*TLSAAPSRSTF Trigger: GAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS TCA 72 bp | GCGCCTCCTCGCGCGCGTCGGCCAGCAATGCAGTCTTaGCTTTGTCTGCGGCGCCATCGCGCAGCACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: APPRARRPAMQS*LCLRRHRAAHS Trigger: TGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGAGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | GCGCGCGTCGGCCAGCAATGCAGTCTTGACTTTGTCTaGGGCGCCATCGCGCAGCACATTCAGCGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ARVGQQCSLDFV*GAIAQHIQRGL Trigger: CAGGCCACGCTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS GCA 72 bp | CTCAGTGCCTCACTGGCCCTCCGCCCTGGCTCCTGCTaGAGTGCATTGTACAAGGTGGCCTCCAGGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSASLALRPGSC*SALYKVASRSW Trigger: CCAGGACCTGGAGGCCACCTTGTACAATGCACTGCAGCAGGAGCCAGGGCGGAGGGCCAGTGAGGCACTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
||
| CDS GCA 72 bp | CTGACGCAGCAGCTGTCTGCGCACCTTCTCTACTGCTaGCTGGAGGTCCTCACGCTGGCTGGCACTCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTQQLSAHLLYC*LEVLTLAGTQC Trigger: GCACTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS GCA 72 bp | GCTCTGACGCAGCAGCTGTCTGCGCACCTTCTCTACTaGTGCCTGGAGGTCCTCACGCTGGCTGGCACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALTQQLSAHLLY*CLEVLTLAGTQ Trigger: CTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAGAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS CCA 72 bp | CGCAGCAGCTGTCTGCGCACCTTCTCTACTGCTGCCTaGAGGTCCTCACGCTGGCTGGCACTCAGTGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSSCLRTFSTAA*RSSRWLALSAS Trigger: TGAGGCACTGAGTGCCAGCCAGCGTGAGGACCTCCAGGCAGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS CAA 72 bp | TCCTCGCGCGCGTCGGCCAGCAATGCAGTCTTGACTTaGTCTGCGGCGCCATCGCGCAGCACATTCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SSRASASNAVLT*SAAPSRSTFSV Trigger: CACGCTGAATGTGCTGCGCGATGGCGCCGCAGACAAAGTCAAGACTGCATTGCTGGCCGACGCGCGCGAGGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 |
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| CDS CAA 90 bp | TTGATCTCGTCCATCAGTCTGCGGATGTCACGTTCGCACTCCCGCTaGATGCGGTGCACCTCATCCTGGTGCGCCTGGTACGCAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: LISSISLRMSRSHSR*MRCTSSWCAWYAAR Trigger: GCGCGCTGCGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCGCAGACTGATGGACGAGATCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS TCA 72 bp | CCATCAGTCTGCGGATGTCACGTTCGCACTCCCGCTTaGTGCGGTGCACCTCATCCTGGTGCGCCTGGTACG | + |
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Preference number: 6 (lower is better) Translates to: PSVCGCHVRTPA*CGAPHPGAPGT Trigger: CGTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCGCAGACTGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS TCA 72 bp | CGCTCCCGCAGGATCTGGCTGTCAAACTCCCGGCTCTaGCGCAGCAGCTGTCTGCGCACCTTCTCTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: RSRRIWLSNSRL*RSSCLRTFSTA Trigger: AGCAGTAGAGAAGGTGCGCAGACAGCTGCTGCGTCAGAGCCGGGAGTTTGACAGCCAGATCCTGCGGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000208852.2 |
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| CDS GCA 72 bp | TTGGTCAGCTTGGCGCGCAGCTCTTCATTAGCCATCTaGACAGAGTCCGTCTCCGCCTCGGGCTTGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LVSLARSSSLAI*TESVSASGLSP Trigger: GGGGGACAAGCCCGAGGCGGAGACGGACTCTGTGCAGATGGCTAATGAAGAGCTGCGCGCCAAGCTGACCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 ENSMUST00000173836.8 ENSMUST00000174097.8 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | TCCAGAGCCTCCTTCTGTAACAGCAGCCGCTGGGTCTaGCCGGTTTGCACACCAAGCTCCTTCTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRASFCNSSRWV*PVCTPSSFSRA Trigger: GGCCCTGGAGAAGGAGCTTGGTGTGCAAACCGGGCAGACCCAGCGGCTGCTGTTACAGAAGGAGGCTCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000174629.2 |
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| CDS TCA 72 bp | CGGCGGCTTTGGCCTTGTCTGCCTGCATGCAGTTACTaGGTGCCTCTTCCGCCTGTTTGCGCGCAGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRLWPCLPACSY*VPLPPVCAQPS Trigger: TGAAGGCTGCGCGCAAACAGGCGGAAGAGGCACTCAGTAACTGCATGCAGGCAGACAAGGCCAAAGCCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000172917.8 |
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| CDS CCA 72 bp | CGCCATGTCACCAATGCCAGGAGGAAGCTCCCTCTTTaGGCTGCTGTGGTGGCGTTCTGCCTCCTTGACCTG | + |
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Preference number: 6 (lower is better) Translates to: RHVTNARRKLPL*AAVVAFCLLDL Trigger: CAGGTCAAGGAGGCAGAACGCCACCACAGCAGCCCAAAGAGGGAGCTTCCTCCTGGCATTGGTGACATGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000174629.2 |
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| CDS CAA 72 bp | TCCATCAGTCTGCGGATGTCACGTTCGCACTCCCGCTaGATGCGGTGCACCTCATCCTGGTGCGCCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SISLRMSRSHSR*MRCTSSWCAWY Trigger: GTACCAGGCGCACCAGGATGAGGTGCACCGCATCAAGCGGGAGTGCGAACGTGACATCCGCAGACTGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CAA 90 bp | ACACCAAGCTCCTTCTCCAGGGCCAGGATCACCCGCTCCTTCCCTTaGATCTCGTCCATCAGTCTGCGGATGTCACGTTCGCACTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TPSSFSRARITRSFP*ISSISLRMSRSHSR Trigger: GCGGGAGTGCGAACGTGACATCCGCAGACTGATGGACGAGATCAAAGGGAAGGAGCGGGTGATCCTGGCCCTGGAGAAGGAGCTTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 |
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| CDS CCA 72 bp | CTCTGGTTGTGGTCTCATCTAAGTCCTCTTCCGGCGTaGCTGGGGTCCGGTCTGTCCTGTCCGTGTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWLWSHLSPLPA*LGSGLSCPCCR Trigger: CCTACAACACGGACAGGACAGACCGGACCCCAGCCACGCCGGAAGAGGACTTAGATGAGACCACAACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS CAA 90 bp | GAACAGCTGGAGGGCGCTGCTGTTGTTCTCGGGGAAGGTGGTGATTaGGAGGTTAAAGGCTGGCGACCTCCGCTCTCTCTCTTCGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EQLEGAAVVLGEGGD*EVKGWRPPLSLFEF Trigger: GAACTCGAAGAGAGAGAGCGGAGGTCGCCAGCCTTTAACCTCCAAATCACCACCTTCCCCGAGAACAACAGCAGCGCCCTCCAGCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | TTCATGCGTTTGTTCTTCTCCACCAGCGGCTTCAGCTaGACCTCCGTCTCCCGAGAGCGCTTCAGCAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: FMRLFFSTSGFS*TSVSRERFSSS Trigger: CGAACTGCTGAAGCGCTCTCGGGAGACGGAGGTGCAGCTGAAGCCGCTGGTGGAGAAGAACAAACGCATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CCA 72 bp | AGGGCGCTGCTGTTGTTCTCGGGGAAGGTGGTGATTTaGAGGTTAAAGGCTGGCGACCTCCGCTCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RALLLFSGKVVI*RLKAGDLRSLS Trigger: AGAGAGAGAGCGGAGGTCGCCAGCCTTTAACCTCCAAATCACCACCTTCCCCGAGAACAACAGCAGCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS TCA 72 bp | CCTTCTCCAGGGCCAGGATCACCCGCTCCTTCCCTTTaGTCTCGTCCATCTTGCTCTTCTCCTGCTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PSPGPGSPAPSL*SRPSCSSPAGT Trigger: AGTTCCAGCAGGAGAAGAGCAAGATGGACGAGATCAAAGGGAAGGAGCGGGTGATCCTGGCCCTGGAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS GCA 72 bp | TGTTCCAGCACCTGCAGCCTCAGGAACTCTATCTCCTaGTCGTCCCTGGTCAGACTGAGGTCATTCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CSSTCSLRNSIS*SSLVRLRSFRD Trigger: GTCCCTGAATGACCTCAGTCTGACCAGGGACGAGCAGGAGATAGAGTTCCTGAGGCTGCAGGTGCTGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | TTCTCCAGCAGGTCCTGGTTTGTCCTCATGAGTACCTaGTTCTCCTCTACCCACGCAGCGTCCTGTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSSRSWFVLMST*FSSTHAASCPF Trigger: GAAGGGACAGGACGCTGCGTGGGTAGAGGAGAAGCAGGTACTCATGAGGACAAACCAGGACCTGCTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS CAA 72 bp | TCAGCTGGCAGAACCTCAGGTCAGCCTCTTCTCTGGTaGTGGTCTCATCTAAGTCCTCTTCCGGCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SAGRTSGQPLLW*WSHLSPLPAWL Trigger: CAGCCACGCCGGAAGAGGACTTAGATGAGACCACAACCAGAGAAGAGGCTGACCTGAGGTTCTGCCAGCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS CAA 72 bp | TCCTTCTCCAGGGCCAGGATCACCCGCTCCTTCCCTTaGATCTCGTCCATCTTGCTCTTCTCCTGCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SFSRARITRSFP*ISSILLFSCWN Trigger: GTTCCAGCAGGAGAAGAGCAAGATGGACGAGATCAAAGGGAAGGAGCGGGTGATCCTGGCCCTGGAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS TCA 72 bp | TCAGGAACTCTATCTCCTGCTCGTCCCTGGTCAGACTaGGGTCATTCAGGGACGTGTGTCGCTTTAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGTLSPARPWSD*GHSGTCVALAR Trigger: CCTCGCTAAAGCGACACACGTCCCTGAATGACCTCAGTCTGACCAGGGACGAGCAGGAGATAGAGTTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | CTCCTTCTCCAGGTCCATCATCTTCTGCGTGAGGGCTaGCTCTGTCCCCTCTATCTGCTTCAGCCACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLQVHHLLREG*LCPLYLLQPLF Trigger: GAAAAGTGGCTGAAGCAGATAGAGGGGACAGAGGCAGCCCTCACGCAGAAGATGATGGACCTGGAGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | CGTTCTCTCTCCAGAGAGAGGTCATCGATGACATGCTaGTGTTCCAGCACCTGCAGCCTCAGGAACTCTATC | + |
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Preference number: 6 (lower is better) Translates to: RSLSRERSSMTC*CSSTCSLRNSI Trigger: GATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGGAGAGAGAACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 |
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| CDS TCA 72 bp | AGGTCATTCAGGGACGTGTGTCGCTTTAGCGAGGCCTaGGCAGACAGCTTTTCTTTCATCTCCACGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RSFRDVCRFSEA*ADSFSFISTFS Trigger: GGAGAACGTGGAGATGAAAGAAAAGCTGTCTGCTCAGGCCTCGCTAAAGCGACACACGTCCCTGAATGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS TCA 72 bp | GCGACCTCCGCTCTCTCTCTTCGAGTTCTAGCACTCTaGATTCTAACAGCTCGTTCTGGTCCTTGGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ATSALSLRVLAL*ILTARSGPWRL Trigger: AAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAGAGAGAGAGCGGAGGTCGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | GGATGCTGTGCAGCAGCTCCTCGTTCTTTTTGTTCATaGGTTTGTTCTTCTCCACCAGCGGCTTCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GCCAAAPRSFCS*VCSSPPAASAA Trigger: TGCAGCTGAAGCCGCTGGTGGAGAAGAACAAACGCATGAACAAAAAGAACGAGGAGCTGCTGCACAGCATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CAA 72 bp | CAGTTGAAATCGCCTCACATCTCGCTCATCCATATGTaGATCCTGGCCACCCATAAGCTCCGCCATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: QLKSPHISLIHM*ILATHKLRHVT Trigger: GGTGACATGGCGGAGCTTATGGGTGGCCAGGATCAACATATGGATGAGCGAGATGTGAGGCGATTTCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000174629.2 |
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| CDS TCA 72 bp | AGTTCAGAGATATTCACACCCTTTACTCCTTCCTGGTaGCAGAACAGCTGGAGGGCGCTGCTGTTGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSEIFTPFTPSW*QNSWRALLLFS Trigger: CGAGAACAACAGCAGCGCCCTCCAGCTGTTCTGTCACCAGGAAGGAGTAAAGGGTGTGAATATCTCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | ACAACATGCTTCAGAGAGAGGTCATCGATGACATGCTaGTGTTCCAGCACCTGCAGCCTCAGGAACTCTATC | + |
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Preference number: 6 (lower is better) Translates to: TTCFRERSSMTC*CSSTCSLRNSI Trigger: GATAGAGTTCCTGAGGCTGCAGGTGCTGGAACAGCAGCATGTCATCGATGACCTCTCTCTGAAGCATGTTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174629.2 |
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| CDS CAA 90 bp | AGCAATTTTCAGTTGAAATCGCCTCACATCTCGCTCATCCATATGTaGATCCTGGCCACCCATAAGCTCCGCCATGTCACCAATGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SNFQLKSPHISLIHM*ILATHKLRHVTNAR Trigger: CCTGGCATTGGTGACATGGCGGAGCTTATGGGTGGCCAGGATCAACATATGGATGAGCGAGATGTGAGGCGATTTCAACTGAAAATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000137019.8 ENSMUST00000174629.2 |
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| CDS CAA 90 bp | ACTTCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTGGTCCTaGGCGTCTTGCATTTCGCTCTTTAGCTGGTTCTCCTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSSSSTLNSNSSFWS*ASCISLFSWFSSIS Trigger: GGAGATGGAGGAGAACCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043794.11 ENSMUST00000212047.2 |
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| CDS CAA 90 bp | TCTTCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTGGTCCTaGGCGTCTTGCATTTCGCTCTTTAGCTGGTTCTCCTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSTLNSNSSFWS*ASCISLFSWFSSIS Trigger: GGAGATGGAGGAGAACCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CCA 72 bp | TCGAGTTCTAGCACTCTGAATTCTAACAGCTCGTTCTaGTCCTTGGCGTCTTGCATTTCGCTCTTTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSTLNSNSSF*SLASCISLFSW Trigger: CCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS CCA 72 bp | AGCCACTTTTCACAGAGGGCAAGCACAGTTCCCGCTTaGATTACTGCAACCTGCTCTTCATTCCTCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SHFSQRASTVPA*ITATCSSFLKF Trigger: GAATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAAAAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CAA 72 bp | TCTAGCACTCTGAATTCTAACAGCTCGTTCTGGTCCTaGGCGTCTTGCATTTCGCTCTTTAGCTGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTLNSNSSFWS*ASCISLFSWFS Trigger: GGAGAACCAGCTAAAGAGCGAAATGCAAGACGCCAAGGACCAGAACGAGCTGTTAGAATTCAGAGTGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043794.11 ENSMUST00000121010.9 ENSMUST00000174629.2 ENSMUST00000212047.2 |
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| CDS CAA 72 bp | CAGCCACTTTTCACAGAGGGCAAGCACAGTTCCCGCTaGGATTACTGCAACCTGCTCTTCATTCCTCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: QPLFTEGKHSSR*DYCNLLFIPQI Trigger: AATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAAAAGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS CAA 90 bp | TATCTGCTTCAGCCACTTTTCACAGAGGGCAAGCACAGTTCCCGCTaGGATTACTGCAACCTGCTCTTCATTCCTCAAATTCCCATTATC | + |
|
Preference number: 6 (lower is better) Translates to: YLLQPLFTEGKHSSR*DYCNLLFIPQIPII Trigger: GATAATGGGAATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAAAAGTGGCTGAAGCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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| CDS GCA 72 bp | TTCACAGAGGGCAAGCACAGTTCCCGCTTGGATTACTaGAACCTGCTCTTCATTCCTCAAATTCCCATTATC | + |
|
Preference number: 6 (lower is better) Translates to: FTEGKHSSRLDY*NLLFIPQIPII Trigger: GATAATGGGAATTTGAGGAATGAAGAGCAGGTTGCAGTAATCCAAGCGGGAACTGTGCTTGCCCTCTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121010.9 ENSMUST00000174629.2 |
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