Pregenerated sensors for JADE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037315Ensembl transcript IDs: ENSMUST00000043693.7, ENSMUST00000115384.9, ENSMUST00000224892.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAGGCATCTGAGGGCTCCTTTTACTGTGACCAGGGGAGCTGCTaGCAGGAGACGAGAGTTGGTGTTCAGTTTCTGTGGAGCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: PQASEGSFYCDQGSC*QETRVGVQFLWSCL Trigger: AAGACAGCTCCACAGAAACTGAACACCAACTCTCGTCTCCTGGCAGCAGCTCCCCTGGTCACAGTAAAAGGAGCCCTCAGATGCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | GTTCCTCAGGCATCTGAGGGCTCCTTTTACTGTGACCAGGGGAGCTaGTGCCAGGAGACGAGAGTTGGTGTTCAGTTTCTGTGGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VPQASEGSFYCDQGS*CQETRVGVQFLWSC Trigger: ACAGCTCCACAGAAACTGAACACCAACTCTCGTCTCCTGGCAGCAGCTCCCCTGGTCACAGTAAAAGGAGCCCTCAGATGCCTGAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR TCA 90 bp | TCTCTTTACCCTTGGTGTTTCTTTACTCCCCTCCCCTTCTGCTTCTaGATCACTGGGCTCCAAATCAGGGCAATAGCCATCAGTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SLYPWCFFTPLPFCF*ITGLQIRAIAISFL Trigger: CAGGAAACTGATGGCTATTGCCCTGATTTGGAGCCCAGTGATTCAGAAGCAGAAGGGGAGGGGAGTAAAGAAACACCAAGGGTAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR TCA 90 bp | TTACTCTTAGGCGTTTCTGATCACCTTTGCATTGAGCTGTGGGAATaGGGGTGTGTCTTGGTTTTCCCATGGCACTCCCGAGCAGAATCA | + |
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Preference number: 1 (lower is better) Translates to: LLLGVSDHLCIELWE*GCVLVFPWHSRAES Trigger: TGATTCTGCTCGGGAGTGCCATGGGAAAACCAAGACACACCCTCATTCCCACAGCTCAATGCAAAGGTGATCAGAAACGCCTAAGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | TCTGTTCCTGCACTTTGGTGTGTGATAGTTTCAGCTTCTCTCGTCTaGTTATCATGTAGCACAGATTTCGGACCCTCTCAAGGTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SVPALWCVIVSASLV*LSCSTDFGPSQGPA Trigger: GGCAGGACCTTGAGAGGGTCCGAAATCTGTGCTACATGATAAGCAGACGAGAGAAGCTGAAACTATCACACACCAAAGTGCAGGAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR CCA 90 bp | AACTGCTCCTTAGAGCTCACATTCTTAGTTGGCTTAACACAGTACTaGAGGTCCTCAGTAGGCTTCACCCATGTATTGGTGGCCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: NCSLELTFLVGLTQY*RSSVGFTHVLVASL Trigger: CAAGGAGGCCACCAATACATGGGTGAAGCCTACTGAGGACCTCCAGTACTGTGTTAAGCCAACTAAGAATGTGAGCTCTAAGGAGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | CCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTaGAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTT | + |
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Preference number: 1 (lower is better) Translates to: PNCSQQPPTKQPQTI*NSCNVLIKTRPEML Trigger: AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR TCA 90 bp | TCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAGTCAGTATCTaGGACTGTTGCTCTCCTGGTCTCTCTCTTGAAGGTTTTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: STLHEARKTTVRVSI*DCCSPGLSLEGFTD Trigger: ATCTGTAAAACCTTCAAGAGAGAGACCAGGAGAGCAACAGTCTCAGATACTGACTCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR TCA 90 bp | GAGTCTCATCAATTGGGCCATAACCCATTTCTCCAAGGTCTTCATTaGGTTCCTGAAGCCAAAAGATATCCATGTCATCTAGGTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: ESHQLGHNPFLQGLH*VPEAKRYPCHLGHS Trigger: GCTATGACCTAGATGACATGGATATCTTTTGGCTTCAGGAACTCAATGAAGACCTTGGAGAAATGGGTTATGGCCCAATTGATGAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | AATGGCATTACATATGGAATTTGGCTAAAGCACTGTTTCCATGTTTaGTCCCCTGCCTCAGAATTCAAAAGCATGAAAGGACACAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: NGITYGIWLKHCFHV*SPASEFKSMKGHRQ Trigger: TTGCCTGTGTCCTTTCATGCTTTTGAATTCTGAGGCAGGGGAGCAAACATGGAAACAGTGCTTTAGCCAAATTCCATATGTAATGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | GGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTaGAAACAGTTACTTTTGCTTTCTAGTGGATATCTTGGATATATT | + |
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Preference number: 1 (lower is better) Translates to: GLELLVSHREWLRLV*KQLLLLSSGYLGYI Trigger: AATATATCCAAGATATCCACTAGAAAGCAAAAGTAACTGTTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR CCA 90 bp | CCCTGCCTCAGAATTCAAAAGCATGAAAGGACACAGGCAACCTGTTaGCCTTTAAGGAATTTACAACTCAGCTTCATTATACTCATTACC | + |
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Preference number: 1 (lower is better) Translates to: PCLRIQKHERTQATC*PLRNLQLSFIILIT Trigger: GGTAATGAGTATAATGAAGCTGAGTTGTAAATTCCTTAAAGGCCAACAGGTTGCCTGTGTCCTTTCATGCTTTTGAATTCTGAGGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR GCA 90 bp | CAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACAAATaGCTTGAGAAGCAGAGCATTTTCCTTGGAAGTAGTACTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: QKRSHFGKCSGHLHK*LEKQSIFLGSSTSV Trigger: TACAGAAGTACTACTTCCAAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACGGGCTCCTTTTACTGTaGCCAGGGGAGCTGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNGLLLL*PGELLP Trigger: TGGCAGCAGCTCCCCTGGTCACAGTAAAAGGAGCCC...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTCCCTTCTTCACTGTCTaGAGACCGGCACACATCACA | + |
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Preference number: 2 (lower is better) Translates to: LPGSARRLCGGGTRRPQVPFFTV*RPAHIT Trigger: TGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGG...AACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR CAA 90 bp | CTAGTTCACGAAGCTTCTGTGCCCGTAGGCTGGTTTTCTCACTTTTaGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGT | + |
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Preference number: 2 (lower is better) Translates to: LVHEASVPVGWFSHF*PGSARRLCGGGTRR Trigger: ACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGAAGCTTCGTGAACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACAGCGATACTGACTTCTaGAATCCACAGGGCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNSDTDF*NPQGTA Trigger: AGCTGTGCCCTGTGGATTCCAGAAGTCAGTATCGCT...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACCTTTTCACAGAGCACTaGATACAAGCCCCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNLFTEH*IQAPVF Trigger: GAAGACAGGGGCTTGTATTCAGTGCTCTGTGAAAAG...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACAAGGCACAGGTGACATaGAAGGCAGTGATACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNKAQVT*KAVIQL Trigger: AAGCTGTATCACTGCCTTTCATGTCACCTGTGCCTT...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACACCCTCTCAAGGTCCTaGCGCAGATGCATAAACATT | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNTLSRS*RRCINI Trigger: AATGTTTATGCATCTGCGGCAGGACCTTGAGAGGGT...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTTGGTTCATATTTTCATaGCAGTGGCGTTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: LPGSARRLCGGGTRRPQVWFIFS*QWRSRT Trigger: AGTTCTGGAACGCCACTGCCATGAAAATATGAACCA...AACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACTCTGTGCCCGTAGGCTaGTTTTCTCACTTTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNSVPVG*FSHFLP Trigger: AGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGA...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTTTGGCTTGTTTATGGGAGATTTTTGTaGCAGGCTCCATTCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LLGDSVVVVLGVPKFWLVYGRFL*QAPFSQ Trigger: CTGAGAGAATGGAGCCTGTCACAAAAATCTCCCATA...AACAAGCCAAAACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACTGGCTCCAACTTTTATaGTTGGGAAATGGCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNWLQLL*LGNGLG Trigger: TCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCA...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCGTCTGCTTATCATGTAGCACAGATTTCGGACCCTCTCAAGGTCCTGCCGTTCTCACTTTTTGCCTaGCTCTGCTCGGCGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSSAYHVAQISDPLKVLPFSLFA*LCSATL Trigger: CAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAA...CGGCAGGACCTTGAGAGGGTCCGAAATCTGTGCTACATGATAAGCAGACGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTTTGGCTTGTTGGACATCTTCACAAATaGCTTGAGAAGCAGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LLGDSVVVVLGVPKFWLVGHLHK*LEKQSI Trigger: AATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCC...AACAAGCCAAAACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGGCTGATTCTTCCCATTACCAATAGACACCTGTCCATGGAGGGCAGCCTGTCAACTTGCACAGGTTaGAAACTAAGGCCCACCGGC | + |
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Preference number: 2 (lower is better) Translates to: VRLILPITNRHLSMEGSLSTCTG*KLRPTG Trigger: GCCGGTGGGCCTTAGTTTGCAACCTGTGCAAGTTGA...CAGGCTGCCCTCCATGGACAGGTGTCTATTGGTAATGGGAAGAATCAGCCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCGTCTGCTTATCATGTAGCACAGATTTCGGACCCTCTCAAGGTCCTGCCGATACGGGGCAAAGGCTaGGTTACTCTTAGGCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LSSAYHVAQISDPLKVLPIRGKG*VTLRRF Trigger: GAAACGCCTAAGAGTAACCCAGCCTTTGCCCCGTAT...CGGCAGGACCTTGAGAGGGTCCGAAATCTGTGCTACATGATAAGCAGACGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCCTGTGGGACGCCTGAGAAGCTGTCTACCCCACAACTGCTCCTTAGAGGGCTTGTTTTGGCTATaGTTGAGGCAAAATGACTTG | + |
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Preference number: 2 (lower is better) Translates to: ALPVGRLRSCLPHNCSLEGLFWL*LRQNDL Trigger: CAAGTCATTTTGCCTCAAGCATAGCCAAAACAAGCC...CTCTAAGGAGCAGTTGTGGGGTAGACAGCTTCTCAGGCGTCCCACAGGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTTTGGCTTATATTTTCATGGCAGTaGCGTTCCAGAACTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: ALLGDSVVVVLGVPKFWLIFSWQ*RSRTSI Trigger: AATAGAAGTTCTGGAACGCCACTGCCATGAAAATAT...AAGCCAAAACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGCTGATTCTTCCCATTACCAATAGACACCTGTCCATGGAGGGCAGCCTGCGGCTAGGTGGGATATaGGAGATTTTTGTGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VRLILPITNRHLSMEGSLRLGGI*EIFVTG Trigger: GCCTGTCACAAAAATCTCCCATATCCCACCTAGCCG...CAGGCTGCCCTCCATGGACAGGTGTCTATTGGTAATGGGAAGAATCAGCCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGCTCTCGGAGTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCCAGGAGACGAGAGTTaGTGTTCAGTTTCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DGALGVGLELLVSHREWLPGDES*CSVSVE Trigger: CTCCACAGAAACTGAACACCAACTCTCGTCTCCTGG...AAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCCGAGAGCTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR CAA 90 bp | GGCTTAACACAGTACTGGAGGTCCTCAGTAGGCTTCACCCATGTATaGGTGGCCTCCTTGAAGGACCTGCTGAAATGTTCCATGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GLTQYWRSSVGFTHV*VASLKDLLKCSMLD Trigger: ATCTAGCATGGAACATTTCAGCAGGTCCTTCAAGGAGGCCACCAATACATGGGTGAAGCCTACTGAGGACCTCCAGTACTGTGTTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR CAA 90 bp | TCCTTGAAGGACCTGCTGAAATGTTCCATGCTAGATTTTCTAATGTaGCCTGGACTGGGTAAGTGGGAGCTGAGCATGGACTCCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SLKDLLKCSMLDFLM*PGLGKWELSMDSWS Trigger: TGACCAGGAGTCCATGCTCAGCTCCCACTTACCCAGTCCAGGCAACATTAGAAAATCTAGCATGGAACATTTCAGCAGGTCCTTCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACATACTAGAATCCTTTTaGTGTTTATATTTCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNILESF*CLYFPQ Trigger: CTGGGGGAAATATAAACACCAAAAGGATTCTAGTAT...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACGCAATACTCTTCCAATaGCATTACATATGGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: GPNCSQQPPTKQPQTICNAILFQ*HYIWNL Trigger: CAAATTCCATATGTAATGCCATTGGAAGAGTATTGC...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCTGTGGGACGCCTGAGAAGCTGTCTACCCCACAACTGCTCCTTAGAGAATGCTTTCTTCTTTTaGCTGAACCAAGCCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: ALPVGRLRSCLPHNCSLENAFFF*LNQAIF Trigger: GAAAATGGCTTGGTTCAGCCAAAAGAAGAAAGCATT...CTCTAAGGAGCAGTTGTGGGGTAGACAGCTTCTCAGGCGTCCCACAGGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGATACGGGGCAAAGGCTaGGTTACTCTTAGGCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LGTGTGHLQELTLEDRILIRGKG*VTLRRF Trigger: GAAACGCCTAAGAGTAACCCAGCCTTTGCCCCGTAT...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR CAA 90 bp | TACTGGAGGTCCTCAGTAGGCTTCACCCATGTATTGGTGGCCTCCTaGAAGGACCTGCTGAAATGTTCCATGCTAGATTTTCTAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: YWRSSVGFTHVLVAS*KDLLKCSMLDFLML Trigger: CAACATTAGAAAATCTAGCATGGAACATTTCAGCAGGTCCTTCAAGGAGGCCACCAATACATGGGTGAAGCCTACTGAGGACCTCCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAGGCTGATTCTTCCCATTACCAATAGACACCTGTCCATGGAGGGCAGCCTGTCTTCATTGAGTTCCTaGAGCCAAAAGATATCCATG | + |
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Preference number: 2 (lower is better) Translates to: VRLILPITNRHLSMEGSLSSLSS*SQKISM Trigger: CATGGATATCTTTTGGCTTCAGGAACTCAATGAAGA...CAGGCTGCCCTCCATGGACAGGTGTCTATTGGTAATGGGAAGAATCAGCCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGCTCTCGGAGTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTGTTACTTTCTCCTTTTaGTTAAAGGGGAAGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: DGALGVGLELLVSHREWLVTFSF*LKGKQT Trigger: AGTCTGCTTCCCCTTTAAGCAAAAGGAGAAAGTAAC...AAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCCGAGAGCTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGCTCTCGGAGTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTGAAAAGGTCACACTTTaGGAAATGTTCTGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: DGALGVGLELLVSHREWLEKVTL*EMFWTS Trigger: AGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTC...AAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCCGAGAGCTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTGCAAAGGTGTTCAGTTTCTGTaGAGCTGTCTTTGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: VGLELLVSHREWLRLVCKGVQFL*SCLCNL Trigger: AAGATTGCAAAGACAGCTCCACAGAAACTGAACACC...TTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTACTGTGTCCTGGTCTCTCTCTTaGAGGTTTTACAGATACCAG | + |
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Preference number: 2 (lower is better) Translates to: FHIHIQWFLRHLRAPFTVSWSLS*RFYRYQ Trigger: CTGGTATCTGTAAAACCTTCAAGAGAGAGACCAGGA...CACAGTAAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTACTGTGTACCTTCTGGAATCTTaGGAATGCCATAGCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: FHIHIQWFLRHLRAPFTVYLLES*ECHSKP Trigger: AGGCTTGCTATGGCATTCTCAAGATTCCAGAAGGTA...CACAGTAAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGACAGGACAAGCGATACTaGCTTCTGGAATCCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRQDKRY*LLESTG Trigger: CCCTGTGGATTCCAGAAGTCAGTATCGCTTGTCCTG...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTGCAAATCTGTCACATCCTCTTaGAAATCCATTGACAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: VGLELLVSHREWLRLVCKSVTSS*KSIDNA Trigger: TGCATTGTCAATGGATTTGCAAGAGGATGTGACAGA...TTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTGCAAACCAAAAATCTGTTCCTaGACTTTGGTGTGTGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: VGLELLVSHREWLRLVCKPKICS*TLVCDS Trigger: ACTATCACACACCAAAGTGCAGGAACAGATTTTTGG...TTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATATTTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTCCCCCTCATCTAGGATaGTCTTCATTTCCAGGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: IYFHIHIQWFLRHLRAPFPPHLG*SSFPGR Trigger: ACGGCCTGGAAATGAAGACCATCCTAGATGAGGGGG...AAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAAATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTGCAAAGGTATAAGCAAGTTCTaGAAAATGGCTCCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VGLELLVSHREWLRLVCKGISKF*KMAPTF Trigger: AAAAGTTGGAGCCATTTTTCAGAACTTGCTTATACC...TTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTATTGAGCTGTGGGAATaGGGGTGTGTCTTGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLIELWE*GCVLVF Trigger: GAAAACCAAGACACACCCTCATTCCCACAGCTCAAT...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGAGCTCTCGGAGTAGGACTGGAGCTCTTGGTTTCACATCGAGAATGGCTTCTGAGAATTACAGTCTaGCTCACACATGTTTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: DGALGVGLELLVSHREWLLRITV*LTHVYK Trigger: TTTATAAACATGTGTGAGGCAGACTGTAATTCTCAG...AAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCCGAGAGCTCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGACAAAATGTAGCAGATaGTTGGGGCATTTGGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: VGLGTGTGHLQELTLEDRTKCSR*LGHLEC Trigger: ACATTCCAAATGCCCCAAGCATCTGCTACATTTTGT...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAGATATAGCCAGGTTCTaGAGACTCTGGGCTGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSDIARF*RLWAGA Trigger: TGCTCCAGCCCAGAGTCTGCAGAACCTGGCTATATC...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAACTGAGCAAATACTCTaGGCCCAACTGTTCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRTEQIL*AQLFPA Trigger: TGCTGGGAACAGTTGGGCCCAGAGTATTTGCTCAGT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTCAGAAGCTGAGGGTATaGAGAAAGGAAATTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLQKLRV*RKEILS Trigger: GGAGAGAATTTCCTTTCTTCATACCCTCAGCTTCTG...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTCAGAATTCAAAAGCATaGAAGGACACAGGCAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLQNSKA*KDTGNL Trigger: CAGGTTGCCTGTGTCCTTTCATGCTTTTGAATTCTG...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAATCAGTTTCCTGATATaGAGCTCTTCCTGTGGGACG | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRISFLI*SSSCGT Trigger: CGTCCCACAGGAAGAGCTTCATATCAGGAAACTGAT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTCCATGTTTGCTCCCCTaGCTCAGAATTCAAAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLPCLLP*LRIQKH Trigger: ATGCTTTTGAATTCTGAGGCAGGGGAGCAAACATGG...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACTGCTTCTGAATCACTaGGCTCCAAATCAGGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSLLLNH*APNQGN Trigger: ATTGCCCTGATTTGGAGCCCAGTGATTCAGAAGCAG...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CAA 90 bp | GAGGTAATACTTCAAAGAACAAAATGTAGCAGATGCTTGGGGCATTaGGAATGTATACAATGGAAGGCTGGCTCATTTGTTTACCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: EVILQRTKCSRCLGH*ECIQWKAGSFVYPG Trigger: TCCTGGGTAAACAAATGAGCCAGCCTTCCATTGTATACATTCCAAATGCCCCAAGCATCTGCTACATTTTGTTCTTTGAAGTATTACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCATCCTGGTCTCTCTCTTaGAGGTTTTACAGATACCAG | + |
|
Preference number: 2 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSSWSLS*RFYRYQ Trigger: CTGGTATCTGTAAAACCTTCAAGAGAGAGACCAGGA...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAGGACATCTTCACAAATaGCTTGAGAAGCAGAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRGHLHK*LEKQSI Trigger: AATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCC...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTGTTACTTTCTCCTTTTaGTTAAAGGGGAAGCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLVTFSF*LKGKQT Trigger: AGTCTGCTTCCCCTTTAAGCAAAAGGAGAAAGTAAC...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGACTGTGGAGCTGTCTTTaGAATCTTCTGAGGTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRLWSCL*NLLRLI Trigger: AATCAACCTCAGAAGATTGCAAAGACAGCTCCACAG...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAGATGCTTGGGGCATTTaGAATGTATACAATGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRDAWGI*NVYNGR Trigger: CCTTCCATTGTATACATTCCAAATGCCCCAAGCATC...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAAAACTCAACCTTGCATaGAGCAAGGAAGACAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSKLNLA*SKEDNS Trigger: ACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTT...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAAATAAGCACAGAAGCTaGGGGTATGAAGAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRNKHRS*GYEERK Trigger: TTTCCTTTCTTCATACCCTCAGCTTCTGTGCTTATT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACACTCCAAGGTCTTCATTaGGTTCCTGAAGCCAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTLQGLH*VPEAKR Trigger: TCTTTTGGCTTCAGGAACTCAATGAAGACCTTGGAG...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAAAAACTCAACCTTGCATaGAGCAAGGAAGACAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKKLNLA*SKEDNS Trigger: ACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTT...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAACCATTTTATCTCCCTaGCTTGAATTTTTCAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GYCERNSTLHEARKTTVRTILSP*LEFFRQ Trigger: TTGCCTGAAAAATTCAAGTCAGGGAGATAAAATGGT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTGCAAACAGTTACTTTTaGTTTCTAGTGGATATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLANSYF*FLVDIL Trigger: CAAGATATCCACTAGAAAGCAAAAGTAACTGTTTGC...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAGAAAAGGTCACACTTTaGGAAATGTTCTGGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSEKVTL*EMFWTS Trigger: AGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTC...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTCAGCCAACTACCTTCTaGAATCTTGAGAATGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: KLRITVCLTHVYKLLLSPQPTTF*NLENAI Trigger: TATGGCATTCTCAAGATTCCAGAAGGTAGTTGGCTG...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CAA 90 bp | GTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTaGGAAGTAGTACTTCTGTACTTTTGTAAACACTATTCACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VLDIFTNALRSRAFS*EVVLLYFCKHYSQV Trigger: AACTTGTGAATAGTGTTTACAAAAGTACAGAAGTACTACTTCCAAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR TCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACAGAAGATAGGATACTGTaGAAGAAACTCAACCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTEDRIL*KKLNLA Trigger: TGCAAGGTTGAGTTTCTTTCACAGTATCCTATCTTC...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAATCTGTCACATCCTCTTaGAAATCCATTGACAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKSVTSS*KSIDNA Trigger: TGCATTGTCAATGGATTTGCAAGAGGATGTGACAGA...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CAA 90 bp | TTCTCTAGTGCATTTGTCAAAGAAAGTCCTTCTGTAATTTCTTCATaGATAAGCTGGACTTGCAAACCAAAAATCTGTTCCTGCACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: FSSAFVKESPSVISS*ISWTCKPKICSCTL Trigger: CAAAGTGCAGGAACAGATTTTTGGTTTGCAAGTCCAGCTTATCAATGAAGAAATTACAGAAGGACTTTCTTTGACAAATGCACTAGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTATACTAGAATCCTTTTaGTGTTTATATTTCCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QTICNSCNVLIKTRPEMLILESF*CLYFPQ Trigger: CTGGGGGAAATATAAACACCAAAAGGATTCTAGTAT...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR GCA 72 bp | GCCCGTAGGCTGGTTTTCTCACTTTTTGCCTGGCTCTaGTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ARRLVFSLFAWL*SATLWWWYSAS Trigger: GGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCAGCCTACGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACCGGCGTCCCCAAGTTTaGGCTTGTTTTGGCTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPNCSQQPPTKQPQTICNRRPQV*ACFGYA Trigger: AGCATAGCCAAAACAAGCCAAAACTTGGGGACGCCG...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACTGGTTTTCTCACTTTTaGCCTGGCTCTGCTCGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: GPNCSQQPPTKQPQTICNWFSHF*PGSARR Trigger: TCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCA...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTCCTGTGGGACGCCTGAGAAGCTGTCTACCCCACAACTGCTCCTTAGAGATGTTCCCAGACCAGTaGCCCTCCAGGCCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ALPVGRLRSCLPHNCSLEMFPDQ*PSRPLE Trigger: TTCCAATGGCCTGGAGGGCAACTGGTCTGGGAACAT...CTCTAAGGAGCAGTTGTGGGGTAGACAGCTTCTCAGGCGTCCCACAGGAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | TTCTGTGCCCGTAGGCTGGTTTTCTCACTTTTTGCCTaGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCG | + |
|
Preference number: 3 (lower is better) Translates to: FCARRLVFSLFA*LCSATLWWWYS Trigger: CGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | CTCCAGGGTATTGATATAGCCAGGTTCTGCAGACTCTaGGCTGGAGCAACGGATATATTTCCGGGGCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQGIDIARFCRL*AGATDIFPGPD Trigger: GTCCGGCCCCGGAAATATATCCGTTGCTCCAGCCCAGAGTCTGCAGAACCTGGCTATATCAATACCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | GGCGTTTCTGATCACCTTTGCATTGAGCTGTGGGAATaGGGGTGTGTCTTGGTTTTCCCATGGCACTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GVSDHLCIELWE*GCVLVFPWHSR Trigger: TCGGGAGTGCCATGGGAAAACCAAGACACACCCTCATTCCCACAGCTCAATGCAAAGGTGATCAGAAACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | CTTCTTCTAGTTCACGAAGCTTCTGTGCCCGTAGGCTaGTTTTCTCACTTTTTGCCTGGCTCTGCTCGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLVHEASVPVG*FSHFLPGSARR Trigger: TCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGAAGCTTCGTGAACTAGAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACATCTTCACAAATGCCTaGAGAAGCAGAGCATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPNCSQQPPTKQPQTICNIFTNA*RSRAFS Trigger: GGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGAT...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | TCCAGGCCATTGGAACTAGAAACCCTGGAGTTAGGCTaGTTCTTCCCATTACCAATAGACACCTGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SRPLELETLELG*FFPLPIDTCPW Trigger: CCATGGACAGGTGTCTATTGGTAATGGGAAGAATCAGCCTAACTCCAGGGTTTCTAGTTCCAATGGCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGCTCCTGGTCTCTCTCTaGAAGGTTTTACAGATACCA | + |
|
Preference number: 3 (lower is better) Translates to: VGLGTGTGHLQELTLEDRLLVSL*KVLQIP Trigger: TGGTATCTGTAAAACCTTCAAGAGAGAGACCAGGAG...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | TCCATGTTTGCTCCCCTGCCTCAGAATTCAAAAGCATaGAAGGACACAGGCAACCTGTTGGCCTTTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SMFAPLPQNSKA*KDTGNLLAFKE Trigger: TTCCTTAAAGGCCAACAGGTTGCCTGTGTCCTTTCATGCTTTTGAATTCTGAGGCAGGGGAGCAAACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | GGAGTAGGACTGGAGCTCTTGGTTTCACATCGAGAATaGCTTCGGCTAGTCTGCAAACAGTTACTTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVGLELLVSHRE*LRLVCKQLLLL Trigger: AAGCAAAAGTAACTGTTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTACTGTGCTCCTGGTCTCTCTCTaGAAGGTTTTACAGATACCA | + |
|
Preference number: 3 (lower is better) Translates to: FHIHIQWFLRHLRAPFTVLLVSL*KVLQIP Trigger: TGGTATCTGTAAAACCTTCAAGAGAGAGACCAGGAG...CACAGTAAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGAGCAGAGCATTTTCCTaGGAAGTAGTACTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VGLGTGTGHLQELTLEDRSRAFS*EVVLLY Trigger: GTACAGAAGTACTACTTCCAAGGAAAATGCTCTGCT...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGATTCAACTTGCACAGGTaGCAAACTAAGGCCCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: GYCERNSTLHEARKTTVRFNLHR*QTKAHR Trigger: CCGGTGGGCCTTAGTTTGCAACCTGTGCAAGTTGAA...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | CATGAAGCAAGGAAGACAACAGTAAGAGTCAGTATCTaGGACTGTTGCTCTCCTGGTCTCTCTCTTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HEARKTTVRVSI*DCCSPGLSLEG Trigger: ACCTTCAAGAGAGAGACCAGGAGAGCAACAGTCTCAGATACTGACTCTTACTGTTGTCTTCCTTGCTTCATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR GCA 72 bp | TCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTaGAACTCTTGTAATGTGCTTATAAAAACTAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: SQQPPTKQPQTI*NSCNVLIKTRP Trigger: AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGCCTCTTGCAAATCCATaGACAATGCAAGGATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGTGTGHLQELTLEDRILPLANP*TMQGFL Trigger: TAAGAATCCTTGCATTGTCAATGGATTTGCAAGAGG...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTACTGTGCCTCTTGCAAATCCATaGACAATGCAAGGATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FHIHIQWFLRHLRAPFTVPLANP*TMQGFL Trigger: TAAGAATCCTTGCATTGTCAATGGATTTGCAAGAGG...CACAGTAAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTATCTTCACAAATGCCTaGAGAAGCAGAGCATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLIFTNA*RSRAFS Trigger: GGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGAT...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAGCATGTAGATGCTGCTaGCTCCAGGGTATTGATATA | + |
|
Preference number: 3 (lower is better) Translates to: GYCERNSTLHEARKTTVRACRCC*LQGIDI Trigger: TATATCAATACCCTGGAGCAAGCAGCATCTACATGC...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | CAATTGGGCCATAACCCATTTCTCCAAGGTCTTCATTaGGTTCCTGAAGCCAAAAGATATCCATGTCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: QLGHNPFLQGLH*VPEAKRYPCHL Trigger: TAGATGACATGGATATCTTTTGGCTTCAGGAACTCAATGAAGACCTTGGAGAAATGGGTTATGGCCCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR GCA 72 bp | ACATATGGAATTTGGCTAAAGCACTGTTTCCATGTTTaGTCCCCTGCCTCAGAATTCAAAAGCATGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TYGIWLKHCFHV*SPASEFKSMKG Trigger: TCCTTTCATGCTTTTGAATTCTGAGGCAGGGGAGCAAACATGGAAACAGTGCTTTAGCCAAATTCCATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR GCA 72 bp | TTGATAAGCTGGACTTGCAAACCAAAAATCTGTTCCTaGACTTTGGTGTGTGATAGTTTCAGCTTCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LISWTCKPKICS*TLVCDSFSFSR Trigger: ACGAGAGAAGCTGAAACTATCACACACCAAAGTGCAGGAACAGATTTTTGGTTTGCAAGTCCAGCTTATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR GCA 72 bp | CTCTTGGTTTCACATCGAGAATGGCTTCGGCTAGTCTaGAAACAGTTACTTTTGCTTTCTAGTGGATATCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLVSHREWLRLV*KQLLLLSSGYL Trigger: AAGATATCCACTAGAAAGCAAAAGTAACTGTTTGCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTAAGTTTTGGCTTGTTTaGGCTATGCTTGAGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLKFWLV*AMLEAK Trigger: TTTTGCCTCAAGCATAGCCAAAACAAGCCAAAACTT...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTATTGATAAGCTGGACTaGCAAACCAAAAATCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLIDKLD*QTKNLF Trigger: GAACAGATTTTTGGTTTGCAAGTCCAGCTTATCAAT...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR TCA 72 bp | TATGTACCCTATGAGTATTCAAATAAGCACAGAAGCTaGGGGTATGAAGAAAGGAAATTCTCTCCCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: YVPYEYSNKHRS*GYEERKFSPSC Trigger: ACATGAGGGAGAGAATTTCCTTTCTTCATACCCTCAGCTTCTGTGCTTATTTGAATACTCATAGGGTACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | TTCAAAGAACAAAATGTAGCAGATGCTTGGGGCATTTaGAATGTATACAATGGAAGGCTGGCTCATTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FKEQNVADAWGI*NVYNGRLAHLF Trigger: AAACAAATGAGCCAGCCTTCCATTGTATACATTCCAAATGCCCCAAGCATCTGCTACATTTTGTTCTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CCA 72 bp | AGAATTCAAAAGCATGAAAGGACACAGGCAACCTGTTaGCCTTTAAGGAATTTACAACTCAGCTTCATTATA | + |
|
Preference number: 3 (lower is better) Translates to: RIQKHERTQATC*PLRNLQLSFII Trigger: TATAATGAAGCTGAGTTGTAAATTCCTTAAAGGCCAACAGGTTGCCTGTGTCCTTTCATGCTTTTGAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTTTGGCTTGTTAGGGAGGTCAGTTACTaGCAGGGAGCAGAAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGDSVVVVLGVPKFWLVREVSY*QGAEER Trigger: CCTTTCTTCTGCTCCCTGCCAGTAACTGACCTCCCT...AACAAGCCAAAACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | GAAGCTTCTGTGCCCGTAGGCTGGTTTTCTCACTTTTaGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EASVPVGWFSHF*PGSARRLCGGG Trigger: ACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGAAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTGGATTGGCTGGTACTTaGACTCCTTTTTCCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGSARRLCGGGTRRPQVGLAGT*TPFSHS Trigger: AGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCC...AACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | TCTGCAGATGGAGCTCTCGGAGTAGGACTGGAGCTCTaGGTTTCACATCGAGAATGGCTTCGGCTAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SADGALGVGLEL*VSHREWLRLVC Trigger: GCAGACTAGCCGAAGCCATTCTCGATGTGAAACCAAGAGCTCCAGTCCTACTCCGAGAGCTCCATCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | CAGTACTGGAGGTCCTCAGTAGGCTTCACCCATGTATaGGTGGCCTCCTTGAAGGACCTGCTGAAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QYWRSSVGFTHV*VASLKDLLKCS Trigger: GGAACATTTCAGCAGGTCCTTCAAGGAGGCCACCAATACATGGGTGAAGCCTACTGAGGACCTCCAGTACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGGGGCTCCTTTTACTGTaGCCAGGGGAGCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTGTGHLQELTLEDRILGLLLL*PGELLP Trigger: TGGCAGCAGCTCCCCTGGTCACAGTAAAAGGAGCCC...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACGGCTTGTTTTGGCTATaGTTGAGGCAAAATGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPNCSQQPPTKQPQTICNGLFWL*LRQNDL Trigger: CAAGTCATTTTGCCTCAAGCATAGCCAAAACAAGCC...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACCTTGAATTAACTTTCTaGGTGATGTTCCCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPNCSQQPPTKQPQTICNLELTF*VMFPDQ Trigger: CTGGTCTGGGAACATCACCCAGAAAGTTAATTCAAG...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCCAACTGTTCCCAGCAGCCTCCGACAAAGCAACCCCAGACAATCTGCAACCCAAAAATCTGTTCCTaGACTTTGGTGTGTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPNCSQQPPTKQPQTICNPKICS*TLVCDS Trigger: ACTATCACACACCAAAGTGCAGGAACAGATTTTTGG...GTTGCAGATTGTCTGGGGTTGCTTTGTCGGAGGCTGCTGGGAACAGTTGGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGGGTTTTCTCACTTTTTaGCTGGCTCTGCTCGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRGFLTF*LALLGD Trigger: GTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACC...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTTCTCACTTTTTGCCTaGCTCTGCTCGGCGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRFSLFA*LCSATL Trigger: CAGAGTCGCCGAGCAGAGCCAGGCAAAAAGTGAGAA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | CTTGAATTAACTTTCTGGGTGATGTTCCCAGACCAGTaGCCCTCCAGGCCATTGGAACTAGAAACCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LELTFWVMFPDQ*PSRPLELETLE Trigger: CTCCAGGGTTTCTAGTTCCAATGGCCTGGAGGGCAACTGGTCTGGGAACATCACCCAGAAAGTTAATTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGAGCGATACTGACTTCTaGAATCCACAGGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRSDTDF*NPQGTA Trigger: AGCTGTGCCCTGTGGATTCCAGAAGTCAGTATCGCT...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | GACCTGCTGAAATGTTCCATGCTAGATTTTCTAATGTaGCCTGGACTGGGTAAGTGGGAGCTGAGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLLKCSMLDFLM*PGLGKWELSMD Trigger: GTCCATGCTCAGCTCCCACTTACCCAGTCCAGGCAACATTAGAAAATCTAGCATGGAACATTTCAGCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGCCCCTGTCTTCAACTTaGACAGGTTGCAAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRPLSST*TGCKLR Trigger: CCTTAGTTTGCAACCTGTGCAAGTTGAAGACAGGGG...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGCACATTCATATCCAGTaGTTCCTCAGGCATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRHIHIQ*FLRHLR Trigger: CCTCAGATGCCTGAGGAACCACTGGATATGAATGTG...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTGGAAGGACACTCATCTaGACTCTCACTGCTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLGRTLI*TLTAAD Trigger: GTCAGCAGCAGTGAGAGTTCAGATGAGTGTCCTTCC...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTTCAACTTGCACAGGTTaGAAACTAAGGCCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLSTCTG*KLRPTG Trigger: GCCGGTGGGCCTTAGTTTGCAACCTGTGCAAGTTGA...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACATTCCTGTGGGACGCCTaGGAAGCTGTCTACCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTFLWDA*EAVYPT Trigger: TGTGGGGTAGACAGCTTCTCAGGCGTCCCACAGGAA...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTCAGCTTCTCTCGTCTaGTTATCATGTAGCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRSASLV*LSCSTD Trigger: ATCTGTGCTACATGATAAGCAGACGAGAGAAGCTGA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTCCAGGAGACGAGAGTTaGTGTTCAGTTTCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLPGDES*CSVSVE Trigger: CTCCACAGAAACTGAACACCAACTCTCGTCTCCTGG...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAAACTCTCACTGCTGCTaGCAGGTCTATGCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GYCERNSTLHEARKTTVRNSHCC*QVYAVS Trigger: TGAAACGGCATAGACCTGTCAGCAGCAGTGAGAGTT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAGGAAGGACACTCATCTaGACTCTCACTGCTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSGRTLI*TLTAAD Trigger: GTCAGCAGCAGTGAGAGTTCAGATGAGTGTCCTTCC...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTCTTCATTGAGTTCCTaGAGCCAAAAGATATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRSSLSS*SQKISM Trigger: CATGGATATCTTTTGGCTTCAGGAACTCAATGAAGA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATAGCACACCTCACTTaGATTAACTTTCTGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRIAHLT*INFLGD Trigger: ATCACCCAGAAAGTTAATTCAAGTGAGGTGTGCTAT...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTTGGGTAAGTGGGAGCTaGGCATGGACTCCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPWVSGS*AWTPGH Trigger: ATGACCAGGAGTCCATGCTCAGCTCCCACTTACCCA...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTCATCCGAGTGTGAATaGTTTCTTCTTTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRSSECE*FLLLAE Trigger: TTCAGCCAAAAGAAGAAAGCATTCACACTCGGATGA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTTGTTCCCAGACCAGTTaGCCTCCAGGCCATTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPCSQTS*PPGHWN Trigger: GTTCCAATGGCCTGGAGGGCAACTGGTCTGGGAACA...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGGGTGTTCAGTTTCTGTaGAGCTGTCTTTGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTGTGHLQELTLEDRILGVQFL*SCLCNL Trigger: AAGATTGCAAAGACAGCTCCACAGAAACTGAACACC...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | CAGGCAATACTCTTCCAATGGCATTACATATGGAATTaGGCTAAAGCACTGTTTCCATGTTTGCTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAILFQWHYIWN*AKALFPCLLPC Trigger: GCAGGGGAGCAAACATGGAAACAGTGCTTTAGCCAAATTCCATATGTAATGCCATTGGAAGAGTATTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | AGCTGGACTTGCAAACCAAAAATCTGTTCCTGCACTTaGGTGTGTGATAGTTTCAGCTTCTCTCGTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWTCKPKICSCT*VCDSFSFSRLL Trigger: AAGCAGACGAGAGAAGCTGAAACTATCACACACCAAAGTGCAGGAACAGATTTTTGGTTTGCAAGTCCAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGCTTCTTCCTATACATTaGGCTAGAAGTAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTGTGHLQELTLEDRLLPIH*ARSKGS Trigger: ACTTCCTTTACTTCTAGCTCAATGTATAGGAAGAAG...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGACTTTTCACAGAGCACTaGATACAAGCCCCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GYCERNSTLHEARKTTVRLFTEH*IQAPVF Trigger: GAAGACAGGGGCTTGTATTCAGTGCTCTGTGAAAAG...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAAAGGCACAGGTGACATaGAAGGCAGTGATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYCERNSTLHEARKTTVRKAQVT*KAVIQL Trigger: AAGCTGTATCACTGCCTTTCATGTCACCTGTGCCTT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAACTCCCCTTCTGCTTCTaGATCACTGGGCTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKLPFCF*ITGLQI Trigger: GATTTGGAGCCCAGTGATTCAGAAGCAGAAGGGGAG...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTGATATAGCCAGGTTCTaGAGACTCTGGGCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPDIARF*RLWAGA Trigger: TGCTCCAGCCCAGAGTCTGCAGAACCTGGCTATATC...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAACCCTTCTTCACTGTCTaGAGACCGGCACACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKPFFTV*RPAHIT Trigger: TGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGG...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAAATGAGGGTGTGTCTTaGTTTTCCCATGGCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSNEGVS*FSHGTP Trigger: GGGAGTGCCATGGGAAAACCAAGACACACCCTCATT...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTCAGGACAAGCGATACTaGCTTCTGGAATCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTICNSCNVLIKTRPEMLQDKRY*LLESTG Trigger: CCCTGTGGATTCCAGAAGTCAGTATCGCTTGTCCTG...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAAGGTCCTGCCGCAGATaGATAAACATTCTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSRSCRR*INILIR Trigger: TCGGATGAGAATGTTTATGCATCTGCGGCAGGACCT...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTCGGCTAGGTGGGATATaGGAGATTTTTGTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPRLGGI*EIFVTG Trigger: GCCTGTCACAAAAATCTCCCATATCCCACCTAGCCG...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTCCCCCTCATCTAGGATaGTCTTCATTTCCAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTICNSCNVLIKTRPEMLPPHLG*SSFPGR Trigger: ACGGCCTGGAAATGAAGACCATCCTAGATGAGGGGG...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AAGCAACCCCAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTTCTGTGCCCGTAGGCTaGTTTTCTCACTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPQTICNSCNVLIKTRPSVPVG*FSHFLP Trigger: AGGCAAAAAGTGAGAAAACCAGCCTACGGGCACAGA...AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | GAGGTAATACTTCAAAGAACAAAATGTAGCAGATGCTaGGGGCATTTGGAATGTATACAATGGAAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVILQRTKCSRC*GHLECIQWKAG Trigger: GCCAGCCTTCCATTGTATACATTCCAAATGCCCCAAGCATCTGCTACATTTTGTTCTTTGAAGTATTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | GACGAGAGTTGGTGTTCAGTTTCTGTGGAGCTGTCTTaGCAATCTTCTGAGGTTGATTTAGGCATTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DESWCSVSVELS*QSSEVDLGIFN Trigger: GTTAAAAATGCCTAAATCAACCTCAGAAGATTGCAAAGACAGCTCCACAGAAACTGAACACCAACTCTCGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | CTCATCAATTGGGCCATAACCCATTTCTCCAAGGTCTTCATTGAGTTCCTGAAGCTTCTTCCTATACATTaGGCTAGAAGTAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LINWAITHFSKVFIEFLKLLPIH*ARSKGS Trigger: ACTTCCTTTACTTCTAGCTCAATGTATAGGAAGAAG...CTTCAGGAACTCAATGAAGACCTTGGAGAAATGGGTTATGGCCCAATTGATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAACCCCAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTTACCTTCTGGAATCTTaGGAATGCCATAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPQTICNSCNVLIKTRPYLLES*ECHSKP Trigger: AGGCTTGCTATGGCATTCTCAAGATTCCAGAAGGTA...AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCATATGGGAGATTTTTGTaGCAGGCTCCATTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSYGRFL*QAPFSQ Trigger: CTGAGAGAATGGAGCCTGTCACAAAAATCTCCCATA...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACAATCAGTTTCCTGATATaGAGCTCTTCCTGTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTISFLI*SSSCGT Trigger: CGTCCCACAGGAAGAGCTTCATATCAGGAAACTGAT...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAAACCCTCTCAAGGTCCTaGCGCAGATGCATAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKTLSRS*RRCINI Trigger: AATGTTTATGCATCTGCGGCAGGACCTTGAGAGGGT...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACACCCATGATAGAATTCTaGAGATGGAGCTCTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTPMIEF*RWSSRS Trigger: ACTCCGAGAGCTCCATCTGCAGAATTCTATCATGGG...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACATGTCTACCCCACAACTaGTCCTTAGAGCTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTCLPHN*SLELTF Trigger: GAATGTGAGCTCTAAGGAGCAGTTGTGGGGTAGACA...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGTCTTCATTGATAAGCTaGACTTGCAAACCAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LGTGTGHLQELTLEDRILSSLIS*TCKPKI Trigger: GATTTTTGGTTTGCAAGTCCAGCTTATCAATGAAGA...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | ATATATTTTCACATTCATATCCAGTGGTTCCTCAGGCATCTGAGGGCTCCTTTTCAGAAGAAAGGCTTCTaGGGTGTTGGTAATGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IYFHIHIQWFLRHLRAPFQKKGF*GVGNVL Trigger: TAGAACATTACCAACACCCCAGAAGCCTTTCTTCTG...AAAAGGAGCCCTCAGATGCCTGAGGAACCACTGGATATGAATGTGAAAATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTATTGAGCTGTGGGAATaGGGGTGTGTCTTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTICNSCNVLIKTRPEMLIELWE*GCVLVF Trigger: GAAAACCAAGACACACCCTCATTCCCACAGCTCAAT...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTGGATTGGCTGGTACTTaGACTCCTTTTTCCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPGLAGT*TPFSHS Trigger: AGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCC...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR CCA 90 bp | GGATACTGTGAAAGAAACTCAACCTTGCATGAAGCAAGGAAGACAACAGTAAGAATAACTCCATCTCTTTaGCAACATCTTCTACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYCERNSTLHEARKTTVRITPSL*QHLLPG Trigger: TCCAGGTAGAAGATGTTGCCAAAGAGATGGAGTTAT...TCTTACTGTTGTCTTCCTTGCTTCATGCAAGGTTGAGTTTCTTTCACAGTATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | CTTCAAAGAACAAAATGTAGCAGATGCTTGGGGCATTaGGAATGTATACAATGGAAGGCTGGCTCATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQRTKCSRCLGH*ECIQWKAGSFV Trigger: AACAAATGAGCCAGCCTTCCATTGTATACATTCCAAATGCCCCAAGCATCTGCTACATTTTGTTCTTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTCTCCAAGGTCTTCATTaGGTTCCTGAAGCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTICNSCNVLIKTRPEMLLQGLH*VPEAKR Trigger: TCTTTTGGCTTCAGGAACTCAATGAAGACCTTGGAG...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTCTGTGGAGCTGTCTTTaGAATCTTCTGAGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPLWSCL*NLLRLI Trigger: AATCAACCTCAGAAGATTGCAAAGACAGCTCCACAG...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAATGGTTCATATTTTCATaGCAGTGGCGTTCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKWFIFS*QWRSRT Trigger: AGTTCTGGAACGCCACTGCCATGAAAATATGAACCA...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAATCTGTTCCTGCACTTTaGTGTGTGATAGTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKSVPAL*CVIVSA Trigger: AGCTGAAACTATCACACACCAAAGTGCAGGAACAGA...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | CGAGAATGGCTTCGGCTAGTCTGCAAACAGTTACTTTaGCTTTCTAGTGGATATCTTGGATATATTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: REWLRLVCKQLL*LSSGYLGYIFT Trigger: TGTGAAAATATATCCAAGATATCCACTAGAAAGCAAAAGTAACTGTTTGCAGACTAGCCGAAGCCATTCTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAACCCCAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTATATTTTCATGGCAGTaGCGTTCCAGAACTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: KQPQTICNSCNVLIKTRPIFSWQ*RSRTSI Trigger: AATAGAAGTTCTGGAACGCCACTGCCATGAAAATAT...AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGAGAATTACAGTCTGCCTCACACATGTTTATAAACTGTTACTTTCTCCTATGCTTGAGGCAAAATaGCTTGAACTTTACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLRITVCLTHVYKLLLSPMLEAK*LELYFI Trigger: GATGAAGTAAAGTTCAAGTCATTTTGCCTCAAGCAT...AGGAGAAAGTAACAGTTTATAAACATGTGTGAGGCAGACTGTAATTCTCAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CCA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACAAATGCTTTCTTCTTTTaGCTGAACCAAGCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTNAFFF*LNQAIF Trigger: GAAAATGGCTTGGTTCAGCCAAAAGAAGAAAGCATT...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| 3UTR CAA 72 bp | ATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTaGGAAGTAGTACTTCTGTACTTTTGTAAACACTAT | + |
|
Preference number: 4 (lower is better) Translates to: IFTNALRSRAFS*EVVLLYFCKHY Trigger: ATAGTGTTTACAAAAGTACAGAAGTACTACTTCCAAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
||
| 3UTR CAA 72 bp | TCTGCAAACAGTTACTTTTGCTTTCTAGTGGATATCTaGGATATATTTTCACATTCATATCCAGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SANSYFCFLVDI*DIFSHSYPVVP Trigger: AGGAACCACTGGATATGAATGTGAAAATATATCCAAGATATCCACTAGAAAGCAAAAGTAACTGTTTGCAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCTGGCTCTGCTCGGCGACTCTGTGGTGGTGGTACTCGGCGTCCCCAAGTTAAGGCTTCTGGGGTGTaGGTAATGTTCTATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSARRLCGGGTRRPQVKASGV*VMFYFL Trigger: CAAGAAATAGAACATTACCAACACCCCAGAAGCCTT...AACTTGGGGACGCCGAGTACCACCACCACAGAGTCGCCGAGCAGAGCCAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTTGCCCTCCAGGCCATaGGAACTAGAAACCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLGTGTGHLQELTLEDRLPSRP*ELETLE Trigger: CTCCAGGGTTTCTAGTTCCAATGGCCTGGAGGGCAA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATGTTCCCAGACCAGTaGCCCTCCAGGCCATTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGLGTGTGHLQELTLEDRMFPDQ*PSRPLE Trigger: TTCCAATGGCCTGGAGGGCAACTGGTCTGGGAACAT...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGCGGCGTCCCCAAGTTTaGGCTTGTTTTGGCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTGTGHLQELTLEDRILRRPQV*ACFGYA Trigger: AGCATAGCCAAAACAAGCCAAAACTTGGGGACGCCG...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
||
| CDS CCA 90 bp | ATCCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTTaGACTCCTTTTTCCCATTCTTCTTTCCATGTGTCAGTAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRDGVGTESGLAGT*TPFSHSSFHVSVKR Trigger: CCTCTTTACTGACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
||
| CDS CCA 90 bp | GATCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTTaGACTCCTTTTTCCCATTCTTCTTTCCATGTGTCAGTAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLRDGVGTESGLAGT*TPFSHSSFHVSVKR Trigger: CCTCTTTACTGACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| CDS TCA 90 bp | AGAAGAAAGGCTTCTGGGGTGTTGGTAATGTTCTATTTCTTGATCTaGGAGACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTTGGA | + |
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Preference number: 5 (lower is better) Translates to: RRKASGVLVMFYFLI*ETALEQSLDWLVLG Trigger: TCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGATCAAGAAATAGAACATTACCAACACCCCAGAAGCCTTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| CDS CCA 90 bp | AGATATAATCCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTaGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCATGTGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: RYNPERRRWNRVWIG*YLDSFFPFFFPCVS Trigger: ACTGACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTATATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGTTGAGGCAAAATGACTaGAACTTTACTTCATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: VGLGTGTGHLQELTLEDRLRQND*NFTSSP Trigger: GGGGGATGAAGTAAAGTTCAAGTCATTTTGCCTCAA...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTTGGATTGGCTGGTACTaGGACTCCTTTTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLWIGWY*DSFFPF Trigger: GAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCA...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| CDS-3UTR CAA 90 bp | GTAGGTCTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGGAATGCTTTCTTCTTTaGGCTGAACCAAGCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: VGLGTGTGHLQELTLEDRECFLL*AEPSHF Trigger: AAAATGGCTTGGTTCAGCCAAAAGAAGAAAGCATTC...CCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAGACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS CCA 90 bp | TACTTTTTCAGATATAATCCTGAGAGACGGCGTTGGAACAGAGTCTaGATTGGCTGGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: YFFRYNPERRRWNRV*IGWYLDSFFPFFFP Trigger: TGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTATATCTGAAAAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | TACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCACATTCAACTTGCACAGGTaGCAAACTAAGGCCCACCGG | + |
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Preference number: 5 (lower is better) Translates to: YKYTRKGHTLGNVLDIFTFNLHR*QTKAHR Trigger: CCGGTGGGCCTTAGTTTGCAACCTGTGCAAGTTGAA...TGTGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAATGGTTTTCTCACTTTTaGCCTGGCTCTGCTCGGCGA | + |
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Preference number: 5 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKWFSHF*PGSARR Trigger: TCGCCGAGCAGAGCCAGGCAAAAAGTGAGAAAACCA...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTTCTGTGGAGCTGTCTTaGCAATCTTCTGAGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLSVELS*QSSEVD Trigger: ATCAACCTCAGAAGATTGCAAAGACAGCTCCACAGA...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | AGTTCTGAAAAATGGCTCCAACTTTTATGCTTGGGAAATGGCCTTGGATTTAAAGCCAGGAGACGAGAGTaGGTGTTCAGTTTCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SSEKWLQLLCLGNGLGFKARRRE*VFSFCG Trigger: TCCACAGAAACTGAACACCAACTCTCGTCTCCTGGC...TTTAAATCCAAGGCCATTTCCCAAGCATAAAAGTTGGAGCCATTTTTCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GGGAAATGTTCTGGACATCTTCACAAATGCCTTGAGAAGCAGAGCATTTTCCTTCTAGATTTTCTAATGTaGCCTGGACTGGGTAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: GKCSGHLHKCLEKQSIFLLDFLM*PGLGKW Trigger: CCACTTACCCAGTCCAGGCAACATTAGAAAATCTAG...AAGGAAAATGCTCTGCTTCTCAAGGCATTTGTGAAGATGTCCAGAACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | AAGCAACCCCAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTTGGATTGGCTGGTACTaGGACTCCTTTTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: KQPQTICNSCNVLIKTRPWIGWY*DSFFPF Trigger: GAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCA...AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| CDS-3UTR CAA 90 bp | CTAGGAACAGGCACTGGACACCTACAAGAACTGACTTTGGAAGATAGGATACTGTTTCTTCCTCTTCTTTaGGGGGAATTAATGGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: LGTGTGHLQELTLEDRILFLPLL*GELMAY Trigger: ATAAGCCATTAATTCCCCCAAAAGAAGAGGAAGAAA...CAGTATCCTATCTTCCAAAGTCAGTTCTTGTAGGTGTCCAGTGCCTGTTCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAGCATGTAGATGCTGCTaGCTCCAGGGTATTGATATA | + |
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Preference number: 5 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSACRCC*LQGIDI Trigger: TATATCAATACCCTGGAGCAAGCAGCATCTACATGC...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTATCTGTTCCTGCACTTaGGTGTGTGATAGTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: QTICNSCNVLIKTRPEMLICSCT*VCDSFS Trigger: GCTGAAACTATCACACACCAAAGTGCAGGAACAGAT...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | GGTACAAATATACCAGAAAAGGTCACACTTTGGGAAATGTTCTGGACATCTTCAAATGGCTTATTGAAGTaGCTTTTGCGCTTTAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GTNIPEKVTLWEMFWTSSNGLLK*LLRFSF Trigger: GAAACTAAAGCGCAAAAGCAACTTCAATAAGCCATT...TGAAGATGTCCAGAACATTTCCCAAAGTGTGACCTTTTCTGGTATATTTGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | AAGCAACCCCAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTATTGATAAGCTGGACTaGCAAACCAAAAATCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: KQPQTICNSCNVLIKTRPIDKLD*QTKNLF Trigger: GAACAGATTTTTGGTTTGCAAGTCCAGCTTATCAAT...AGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTGGGGTTGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS-3UTR CAA 90 bp | CAGACAATCTGCAACTCTTGTAATGTGCTTATAAAAACTAGACCTGAAATGCTTAAGTTTTGGCTTGTTTaGGCTATGCTTGAGGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: QTICNSCNVLIKTRPEMLKFWLV*AMLEAK Trigger: TTTTGCCTCAAGCATAGCCAAAACAAGCCAAAACTT...AAGCATTTCAGGTCTAGTTTTTATAAGCACATTACAAGAGTTGCAGATTGTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115384.9 |
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| CDS CCA 72 bp | CCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTaGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PERRRWNRVWIG*YLDSFFPFFFP Trigger: TGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS CCA 72 bp | GACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTTaGACTCCTTTTTCCCATTCTTCTTTCCATGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DGVGTESGLAGT*TPFSHSSFHVS Trigger: TGACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| CDS CCA 72 bp | TCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTaGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SERRRWNRVWIG*YLDSFFPFFFP Trigger: TGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| CDS CAA 72 bp | AGACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTaGGACTCCTTTTTCCCATTCTTCTTTCCATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RRRWNRVWIGWY*DSFFPFFFPCV Trigger: GACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 ENSMUST00000224892.2 |
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| CDS CAA 72 bp | CTTGATCTGAGAGACGGCGTTGGAACAGAGTCTGGATaGGCTGGTACTTGGACTCCTTTTTCCCATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LDLRDGVGTESG*AGTWTPFSHSS Trigger: AGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| CDS CAA 90 bp | AATCCTGAGAGACGGCGTTGGAACAGAGTCTGGATTGGCTGGTACTaGGACTCCTTTTTCCCATTCTTCTTTCCATGTGTCAGTAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: NPERRRWNRVWIGWY*DSFFPFFFPCVSKE Trigger: CTCTTTACTGACACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS CCA 72 bp | AGATATAATCCTGAGAGACGGCGTTGGAACAGAGTCTaGATTGGCTGGTACTTGGACTCCTTTTTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: RYNPERRRWNRV*IGWYLDSFFPF Trigger: GAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTATATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS CAA 72 bp | ATAATCCTGAGAGACGGCGTTGGAACAGAGTCTGGATaGGCTGGTACTTGGACTCCTTTTTCCCATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IILRDGVGTESG*AGTWTPFSHSS Trigger: AGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS CAA 90 bp | GTTCTATTTCTTGATCTGAGAGACGGCGTTGGAACAGAGTCTGGATaGGCTGGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: VLFLDLRDGVGTESG*AGTWTPFSHSSFHV Trigger: CACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGATCAAGAAATAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224892.2 |
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| CDS CCA 72 bp | CTTTACTTTTTCAGATATAATCCTGAGAGACGGCGTTaGAACAGAGTCTGGATTGGCTGGTACTTGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: LYFFRYNPERRR*NRVWIGWYLDS Trigger: GGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTATATCTGAAAAAGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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| CDS CAA 90 bp | TTTTCAGATATAATCCTGAGAGACGGCGTTGGAACAGAGTCTGGATaGGCTGGTACTTGGACTCCTTTTTCCCATTCTTCTTTCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: FSDIILRDGVGTESG*AGTWTPFSHSSFHV Trigger: CACATGGAAAGAAGAATGGGAAAAAGGAGTCCAAGTACCAGCCAATCCAGACTCTGTTCCAACGCCGTCTCTCAGGATTATATCTGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043693.7 ENSMUST00000115384.9 |
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