Pregenerated sensors for IZUMO4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055862Ensembl transcript IDs: ENSMUST00000095426.5, ENSMUST00000218184.2, ENSMUST00000218330.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTaGGGCAGGCAGCAGCTAGCTTCTCCAGAGGCAACAGTGCAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: LSRPSLGSMGVGGVT*GRQQLASPEATVQL Trigger: CAACTGCACTGTTGCCTCTGGAGAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGTTGAGTCCTGGCCTCTaGCGAGGCTGGGGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPVPAQPGIHGSGRGNLRLSPGL*RGWGLA Trigger: TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAA...CCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCATTGAGTCCTGGCCTCTaGCGAGGCTGGGGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VPAQPGIHGSGRGNLRQALSPGL*RGWGLA Trigger: TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAA...TGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAAGTGCAGTTGAGTCCTaGCCTCTGCCGAGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VPAQPGIHGSGRGNLRQASAVES*PLPRLG Trigger: CCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACT...TGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR CAA 90 bp | CCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTaGAGGCAGGCAGCAGCTAGCTTCTCCAGAGGCAACAGTGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PVPAQPGIHGSGRGN*RQAAASFSRGNSAV Trigger: AACTGCACTGTTGCCTCTGGAGAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR TCA 72 bp | CCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTaGGGCAGGCAGCAGCTAGCTTCTCCAGAGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PSLGSMGVGGVT*GRQQLASPEAT Trigger: TGTTGCCTCTGGAGAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR CCA 72 bp | CCAGACACTTTATGTTTTGTGACAGGAAGGCTGGGGTaGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PDTLCFVTGRLG*FCTSKLRPQGR Trigger: TCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| 3UTR GCA 72 bp | ACTTTATGTTTTGTGACAGGAAGGCTGGGGTGGTTCTaGACATCCAAGTTGAGGCCGCAGGGAAGAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: TLCFVTGRLGWF*TSKLRPQGRNT Trigger: TGTGTTTCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCACAAAACATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| 3UTR TCA 72 bp | TCAGAGACTTTTTCCAAGGTCAGGTTGACCAGATGCTaGGGTTCCAGACACTTTATGTTTTGTGACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SETFSKVRLTRC*GSRHFMFCDRK Trigger: CTTCCTGTCACAAAACATAAAGTGTCTGGAACCTCAGCATCTGGTCAACCTGACCTTGGAAAAAGTCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCAGGGCCATGGCCTaGCCCAGCCTGCCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGSRAMA*PSLPCP Trigger: TGGGCAAGGCAGGCTGGGCCAGGCCATGGCCCTGCT...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | CCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAAAATTGGGGTCGCACTaGAGGCAGCCCCGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAQPGIHGSGRGNLRQAAKLGSH*RQPRAS Trigger: GCTGGCCCGGGGCTGCCTGCAGTGCGACCCCAATTT...TGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCTGGATGAGGCGCACTTaGTCCCGGAAGATGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGWMRRT*SRKMAR Trigger: GCGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCA...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCCAGCGCCGCTGTCATaGCCAGAAACAACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVPAQPGIHGSGRGNLRPAPLS*PETTAG Trigger: CCCTGCTGTTGTTTCTGGGCATGACAGCGGCGCTGG...CCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR CAA 72 bp | AGGCAGCAGCTAGCTTCTCCAGAGGCAACAGTGCAGTaGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQQLASPEATVQ*SPGLCRGWGLA Trigger: TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGAGAAGCTAGCTGCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCAAATTGGGGTCGCACTaGAGGCAGCCCCGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFKLGSH*RQPRAS Trigger: GCTGGCCCGGGGCTGCCTGCAGTGCGACCCCAATTT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGGGGAGTCCGTGCAGTTaGTGCAGGAGATGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVPAQPGIHGSGRGNLRGSPCS*CRRWSR Trigger: ACGAGACCATCTCCTGCAGCAACTGCACGGACTCCC...CCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCACTTCTCCGCGAAATTaGGGTCGCACTGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGTSPRN*GRTAGS Trigger: GCTGCCTGCAGTGCGACCCCAATTTCGCGGAGAAGT...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAACTTCTCCGCGAAATTaGGGTCGCACTGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEATVQLSPGLCRGWGLATSPRN*GRTAGS Trigger: GCTGCCTGCAGTGCGACCCCAATTTCGCGGAGAAGT...TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCTGGCCCGCAGCTCATTaGGGAAATACCCTGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAAWPAAH*GNTLGS Trigger: ACTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCA...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCAGCTGGTCCATCCTCTaGTACACGGCTTCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAASWSIL*YTASAT Trigger: AGTAGCAGAAGCCGTGTACCAGAGGATGGACCAGCT...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCATTCCCCTGGTACAGCTaGTCCATCCTCTGGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: PAQPGIHGSGRGNLRQAAFPWYS*SILWYT Trigger: CGTGTACCAGAGGATGGACCAGCTGTACCAGGGGAA...TGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCTGGCCCGCAGCTCATTaGGGAAATACCCTGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGWPAAH*GNTLGS Trigger: ACTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCA...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCTCTATGATGGCGTTCTaGATGAGGCGCACTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAASMMAF*MRRTCS Trigger: GGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGA...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| 3UTR CAA 72 bp | GCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTaGAGGCAGGCAGCAGCTAGCTTCTCCAGAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQPGIHGSGRGN*RQAAASFSRGN Trigger: GTTGCCTCTGGAGAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCACGGCTTCTGCTACTTaGTATAGCTTCTTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAATASAT*YSFFRV Trigger: CACCCGGAAGAAGCTATATCAAGTAGCAGAAGCCGT...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCCCAGCGCCGCTGTCATaGCCAGAAACAACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFPAPLS*PETTAG Trigger: CCCTGCTGTTGTTTCTGGGCATGACAGCGGCGCTGG...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAAGTCCGTGCAGTTGCTaGAGGAGATGGTCTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PEATVQLSPGLCRGWGLASPCSC*RRWSRT Trigger: AGTACGAGACCATCTCCTGCAGCAACTGCACGGACT...TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGAGTCCGTGCAGTTGCTaGAGGAGATGGTCTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPVPAQPGIHGSGRGNLRSPCSC*RRWSRT Trigger: AGTACGAGACCATCTCCTGCAGCAACTGCACGGACT...CCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCAGGAATGGCCAGATaGAGCTCCTTCATCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAQPGIHGSGRGNLRQAAAGMAR*SSFIVF Trigger: GAACACGATGAAGGAGCTCCATCTGGCCATTCCTGC...TGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCTGGTCCATCCTCTaGTACACGGCTTCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGSWSIL*YTASAT Trigger: AGTAGCAGAAGCCGTGTACCAGAGGATGGACCAGCT...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR TCA 90 bp | GCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCACTTTTCCAAGGTCAGGTTaGCCAGATGCTGAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATVQLSPGLCRGWGLAATFPRSG*PDAEVP Trigger: TGGAACCTCAGCATCTGGTCAACCTGACCTTGGAAA...AGTGGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCATTTCCAAGGTCAGGTTaGCCAGATGCTGAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEATVQLSPGLCRGWGLAFPRSG*PDAEVP Trigger: TGGAACCTCAGCATCTGGTCAACCTGACCTTGGAAA...TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCGGGAGTCCGTGCAGTTaGTGCAGGAGATGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFGSPCS*CRRWSR Trigger: ACGAGACCATCTCCTGCAGCAACTGCACGGACTCCC...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCTCCTTCATCGTGTTCTaGATCCAATCGGAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGNSAVESWPLPRLGAGSFIVF*IQSESS Trigger: GCTGCTCTCCGATTGGATCCAGAACACGATGAAGGA...GCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCACTTCCTTCATCGTGTTCTaGATCCAATCGGAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATVQLSPGLCRGWGLAATSFIVF*IQSESS Trigger: GCTGCTCTCCGATTGGATCCAGAACACGATGAAGGA...AGTGGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAAAGTACATCTTCCCCTaGTACAGCTGGTCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAQPGIHGSGRGNLRQAKYIFP*YSWSIL Trigger: GAGGATGGACCAGCTGTACCAGGGGAAGATGTACTT...TGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCAGTTGCTGCAGGAGATaGTCTCGTACTGGTAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAASCCRR*SRTGRY Trigger: GTATCTACCAGTACGAGACCATCTCCTGCAGCAACT...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAACACTTTATGTTTTGTaGCAGGAAGGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEATVQLSPGLCRGWGLATLYVL*QEGWGG Trigger: ACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGT...TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAATTGGGGAAATACCCTaGGAAGTACATCTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPAQPGIHGSGRGNLRQAIGEIP*EVHLPL Trigger: CAGGGGAAGATGTACTTCCCAGGGTATTTCCCCAAT...TGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAACAGGAAGGCTGGGGTaGTTCTCATCTTTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEATVQLSPGLCRGWGLATGRLG*FSSFHP Trigger: AGGATGAAAAGATGAGAACCACCCCAGCCTTCCTGT...TGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAACAGGAAGGCTGGGGTaGTTCTCATCTTTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAQPGIHGSGRGNLRQAATGRLG*FSSFHP Trigger: AGGATGAAAAGATGAGAACCACCCCAGCCTTCCTGT...TGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCTGTGCCAGGTGTTTTTaGAGTAGTAGCCAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EATVQLSPGLCRGWGLAACARCF*SSSQSK Trigger: TTTGCTTTGGCTACTACTGCAAAAACACCTGGCACA...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095426.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCTCTATGATGGCGTTCTaGATGAGGCGCACTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFSMMAF*MRRTCS Trigger: GGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGA...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGTTCCCCTGGTACAGCTaGTCCATCCTCTGGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: FCDRKAGVVLHIQVEAAGFPWYS*SILWYT Trigger: CGTGTACCAGAGGATGGACCAGCTGTACCAGGGGAA...CCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCAAGTACATCTTCCCCTaGTACAGCTGGTCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFKYIFP*YSWSIL Trigger: GAGGATGGACCAGCTGTACCAGGGGAAGATGTACTT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | GTGACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGATCTATGATGGCGTTCTaGATGAGGCGCACTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGRLGWFCTSKLRPQGRSMMAF*MRRTCS Trigger: GGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGA...TCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCACACTTTATGTTTTGTaGCAGGAAGGCTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFTLYVL*QEGWGG Trigger: ACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGACCACACAGGCAGGTGTaGCTCATCTTTTCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGRLGWFCTSKLRPQGRPHRQV*LIFSSC Trigger: ACAGGATGAAAAGATGAGTCACACCTGCCTGTGTGG...TCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGAAAAGTCCGTGCAGTTGCTaGAGGAGATGGTCTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: DRKAGVVLHIQVEAAGKKSPCSC*RRWSRT Trigger: AGTACGAGACCATCTCCTGCAGCAACTGCACGGACT...TTTCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCATTGGGGAAATACCCTaGGAAGTACATCTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFIGEIP*EVHLPL Trigger: CAGGGGAAGATGTACTTCCCAGGGTATTTCCCCAAT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCAGTTGCTGCAGGAGATaGTCTCGTACTGGTAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PGIHGSGRGNLRQAAASFSCCRR*SRTGRY Trigger: GTATCTACCAGTACGAGACCATCTCCTGCAGCAACT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGTTCCAGACACTTTATGTTTTGTGACAGGAAGGCTGGGGTGGTTCTGCGGGAGTCCGTGCAGTTaGTGCAGGAGATGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AEVPDTLCFVTGRLGWFCGSPCS*CRRWSR Trigger: ACGAGACCATCTCCTGCAGCAACTGCACGGACTCCC...GCAGAACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGTCTGGAACCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGTACATCTTCCCCTaGTACAGCTGGTCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCDRKAGVVLHIQVEAAGKYIFP*YSWSIL Trigger: GAGGATGGACCAGCTGTACCAGGGGAAGATGTACTT...CCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCAGACACTTTATGTTTTGTGACAGGAAGGCTGGGGTGGTTCTGCACATGGCCCGCAGCTCATTaGGGAAATACCCTGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPDTLCFVTGRLGWFCTWPAAH*GNTLGS Trigger: ACTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCA...TGTGCAGAACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGTCTGGAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | GATGCTGAGGTTCCAGACACTTTATGTTTTGTGACAGGAAGGCTGGGGTGGTTCATTGGGGAAATACCCTaGGAAGTACATCTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DAEVPDTLCFVTGRLGWFIGEIP*EVHLPL Trigger: CAGGGGAAGATGTACTTCCCAGGGTATTTCCCCAAT...GAACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGTCTGGAACCTCAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCAGACACTTTATGTTTTGTGACAGGAAGGCTGGGGTGGTTCTGCACAAGTTGCTGCAGGAGATaGTCTCGTACTGGTAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EVPDTLCFVTGRLGWFCTSCCRR*SRTGRY Trigger: GTATCTACCAGTACGAGACCATCTCCTGCAGCAACT...TGTGCAGAACCACCCCAGCCTTCCTGTCACAAAACATAAAGTGTCTGGAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCTGGATGAGGCGCACTaGCTCCCGGAAGATGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPVPAQPGIHGSGRGNLRLDEAH*LPEDGP Trigger: CGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCAG...CCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGACAGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCAACAGTGCAGTTGAGTCCTGGCCTCTGCCGAGGCTGGGGGCTGGCAGCCATGGCCCGCAGCTCATaGGGGAAATACCCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EATVQLSPGLCRGWGLAAMARSS*GKYPGK Trigger: CTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCAT...GGCTGCCAGCCCCCAGCCTCGGCAGAGGCCAGGACTCAACTGCACTGTTGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CAA 90 bp | CCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCATGGGAGTCCGTGCAGTaGCTGCAGGAGATGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAQPGIHGSGRGNLRQAAWESVQ*LQEMVS Trigger: CGAGACCATCTCCTGCAGCAACTGCACGGACTCCCA...TGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCGGCCCAGCCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAAACTTCTCCGCGAAATaGGGGTCGCACTGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPAQPGIHGSGRGNLRQANFSAK*GSHCRQ Trigger: CTGCCTGCAGTGCGACCCCAATTTCGCGGAGAAGTT...TGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGGCTGGGCCGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCTGGGAGTCCGTGCAGTaGCTGCAGGAGATGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGIHGSGRGNLRQAAASFWESVQ*LQEMVS Trigger: CGAGACCATCTCCTGCAGCAACTGCACGGACTCCCA...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGATCCATGGGAGTGGGAGGGGTAACTTGAGGCAGGCAGCAGCTAGCTTCAACTTCTCCGCGAAATaGGGGTCGCACTGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGIHGSGRGNLRQAAASFNFSAK*GSHCRQ Trigger: CTGCCTGCAGTGCGACCCCAATTTCGCGGAGAAGTT...GAAGCTAGCTGCTGCCTGCCTCAAGTTACCCCTCCCACTCCCATGGATCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS GCA 90 bp | CAGTCAATGCGGCTCTCTATGATGGCGTTCTGGATGAGGCGCACTTaGTCCCGGAAGATGGCCCGCAGCTCATTGGGGAAATACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSMRLSMMAFWMRRT*SRKMARSSLGKYPG Trigger: CCCAGGGTATTTCCCCAATGAGCTGCGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGAGAGCCGCATTGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGAAGAAACACATGGGAGTCCGTGCAGTaGCTGCAGGAGATGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLGWFCTSKLRPQGRNTWESVQ*LQEMVS Trigger: CGAGACCATCTCCTGCAGCAACTGCACGGACTCCCA...TGTGTTTCTTCCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTGACAGGAAGGCTGGGGTGGTTCTGCACATCCAAGTTGAGGCCGCAGGGATGGCCCGCAGCTCATaGGGGAAATACCCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FCDRKAGVVLHIQVEAAGMARSS*GKYPGK Trigger: CTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCAT...CCCTGCGGCCTCAACTTGGATGTGCAGAACCACCCCAGCCTTCCTGTCACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218330.2 |
||
| CDS CCA 90 bp | GTGATCTCAGCAGGAATGGCCAGATGGAGCTCCTTCATCGTGTTCTaGATCCAATCGGAGAGCAGCATCCCCGACACAGGAATGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VISAGMARWSSFIVF*IQSESSIPDTGMSP Trigger: GGGTGACATTCCTGTGTCGGGGATGCTGCTCTCCGATTGGATCCAGAACACGATGAAGGAGCTCCATCTGGCCATTCCTGCTGAGATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 90 bp | AGAGCAGCATCCCCGACACAGGAATGTCACCCACCCACCACGACTTaGGGTTCACGTGGTGACGATAGAAGGAGAACTTCTCCGCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RAASPTQECHPPTTT*GSRGDDRRRTSPRN Trigger: ATTTCGCGGAGAAGTTCTCCTTCTATCGTCACCACGTGAACCTCAAGTCGTGGTGGGTGGGTGACATTCCTGTGTCGGGGATGCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 90 bp | CCCTGGTACAGCTGGTCCATCCTCTGGTACACGGCTTCTGCTACTTaGTATAGCTTCTTCCGGGTGATCTCAGCAGGAATGGCCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PWYSWSILWYTASAT*YSFFRVISAGMARW Trigger: CCATCTGGCCATTCCTGCTGAGATCACCCGGAAGAAGCTATATCAAGTAGCAGAAGCCGTGTACCAGAGGATGGACCAGCTGTACCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 90 bp | CTGACTCCCACTGTGCCGATGACTTGCAGTAGTAGCCAAAGCAAATaGCGTGGGAGTCCGTGCAGTTGCTGCAGGAGATGGTCTCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LTPTVPMTCSSSQSK*RGSPCSCCRRWSRT Trigger: AGTACGAGACCATCTCCTGCAGCAACTGCACGGACTCCCACGTCATTTGCTTTGGCTACTACTGCAAGTCATCGGCACAGTGGGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS TCA 90 bp | TCCTCTGGTACACGGCTTCTGCTACTTGATATAGCTTCTTCCGGGTaGTCTCAGCAGGAATGGCCAGATGGAGCTCCTTCATCGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGTRLLLLDIASSG*SQQEWPDGAPSSCS Trigger: AGAACACGATGAAGGAGCTCCATCTGGCCATTCCTGCTGAGATCACCCGGAAGAAGCTATATCAAGTAGCAGAAGCCGTGTACCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 90 bp | CATCCTGTTTGTGCCAGGTGTTTTTGCAGTAGTAGCCAAAGCAAATaGCGTGGGAGTCCGTGCAGTTGCTGCAGGAGATGGTCTCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: HPVCARCFCSSSQSK*RGSPCSCCRRWSRT Trigger: AGTACGAGACCATCTCCTGCAGCAACTGCACGGACTCCCACGTCATTTGCTTTGGCTACTACTGCAAAAACACCTGGCACAAACAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095426.5 |
||
| CDS GCA 90 bp | TGTGACAGGAAGGCTGGGGTGGTTCTCATCTTTTCATCCTGTTTGTaGCAGGTGTTTATGTATTTCAGAAGGCCCTGTACAGCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CDRKAGVVLIFSSCL*QVFMYFRRPCTADS Trigger: GGAGTCAGCTGTACAGGGCCTTCTGAAATACATAAACACCTGGCACAAACAGGATGAAAAGATGAGAACCACCCCAGCCTTCCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218184.2 |
||
| CDS CCA 72 bp | CGTGGTGACGATAGAAGGAGAACTTCTCCGCGAAATTaGGGTCGCACTGCAGGCAGCCCCGGGCCAGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGDDRRRTSPRN*GRTAGSPGPAP Trigger: CGGCGCTGGCCCGGGGCTGCCTGCAGTGCGACCCCAATTTCGCGGAGAAGTTCTCCTTCTATCGTCACCACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS CAA 72 bp | GCGGCTCTCTATGATGGCGTTCTGGATGAGGCGCACTaGCTCCCGGAAGATGGCCCGCAGCTCATTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AALYDGVLDEAH*LPEDGPQLIGE Trigger: TTCCCCAATGAGCTGCGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGAGAGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS GCA 72 bp | CGGCTCTCTATGATGGCGTTCTGGATGAGGCGCACTTaGTCCCGGAAGATGGCCCGCAGCTCATTGGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RLSMMAFWMRRT*SRKMARSSLGK Trigger: TTTCCCCAATGAGCTGCGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGAGAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS CCA 72 bp | GGCGCACTTGCTCCCGGAAGATGGCCCGCAGCTCATTaGGGAAATACCCTGGGAAGTACATCTTCCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GALAPGRWPAAH*GNTLGSTSSPG Trigger: ACCAGGGGAAGATGTACTTCCCAGGGTATTTCCCCAATGAGCTGCGGGCCATCTTCCGGGAGCAAGTGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS CAA 90 bp | ACAGTCAATGCGGCTCTCTATGATGGCGTTCTGGATGAGGCGCACTaGCTCCCGGAAGATGGCCCGCAGCTCATTGGGGAAATACCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVNAALYDGVLDEAH*LPEDGPQLIGEIPW Trigger: CCAGGGTATTTCCCCAATGAGCTGCGGGCCATCTTCCGGGAGCAAGTGCGCCTCATCCAGAACGCCATCATAGAGAGCCGCATTGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS TCA 72 bp | TCCCCGACACAGGAATGTCACCCACCCACCACGACTTaGGGTTCACGTGGTGACGATAGAAGGAGAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPTQECHPPTTT*GSRGDDRRRTS Trigger: AGAAGTTCTCCTTCTATCGTCACCACGTGAACCTCAAGTCGTGGTGGGTGGGTGACATTCCTGTGTCGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 72 bp | ACTGTGCCGATGACTTGCAGTAGTAGCCAAAGCAAATaGCGTGGGAGTCCGTGCAGTTGCTGCAGGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: TVPMTCSSSQSK*RGSPCSCCRRW Trigger: CCATCTCCTGCAGCAACTGCACGGACTCCCACGTCATTTGCTTTGGCTACTACTGCAAGTCATCGGCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS CCA 72 bp | AGCTTCTTCCGGGTGATCTCAGCAGGAATGGCCAGATaGAGCTCCTTCATCGTGTTCTGGATCCAATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFFRVISAGMAR*SSFIVFWIQSE Trigger: CTCCGATTGGATCCAGAACACGATGAAGGAGCTCCATCTGGCCATTCCTGCTGAGATCACCCGGAAGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS TCA 72 bp | TGTGCCAGGTGTTTTTGCAGTAGTAGCCAAAGCAAATaGCGTGGGAGTCCGTGCAGTTGCTGCAGGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CARCFCSSSQSK*RGSPCSCCRRW Trigger: CCATCTCCTGCAGCAACTGCACGGACTCCCACGTCATTTGCTTTGGCTACTACTGCAAAAACACCTGGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095426.5 |
||
| CDS CCA 72 bp | TCATTGGGGAAATACCCTGGGAAGTACATCTTCCCCTaGTACAGCTGGTCCATCCTCTGGTACACGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGKYPGKYIFP*YSWSILWYTAS Trigger: AGAAGCCGTGTACCAGAGGATGGACCAGCTGTACCAGGGGAAGATGTACTTCCCAGGGTATTTCCCCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 ENSMUST00000218330.2 |
||
| CDS CAA 72 bp | AGGAAGGCTGGGGTGGTTCTCATCTTTTCATCCTGTTaGTGCCAGGTGTTTATGTATTTCAGAAGGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKAGVVLIFSSC*CQVFMYFRRPC Trigger: ACAGGGCCTTCTGAAATACATAAACACCTGGCACAAACAGGATGAAAAGATGAGAACCACCCCAGCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218184.2 |
||
| CDS TCA 72 bp | GGGTCAGACACTCAGAGACTTTTTCCAAGGTCAGGTTaGCCAGATGCTGAGGTTCCAGACACTTTATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GSDTQRLFPRSG*PDAEVPDTLCF Trigger: AAAACATAAAGTGTCTGGAACCTCAGCATCTGGTCAACCTGACCTTGGAAAAAGTCTCTGAGTGTCTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095426.5 ENSMUST00000218184.2 |
||
| CDS GCA 72 bp | AAGGCTGGGGTGGTTCTCATCTTTTCATCCTGTTTGTaGCAGGTGTTTATGTATTTCAGAAGGCCCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: KAGVVLIFSSCL*QVFMYFRRPCT Trigger: TGTACAGGGCCTTCTGAAATACATAAACACCTGGCACAAACAGGATGAAAAGATGAGAACCACCCCAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218184.2 |
||