Pregenerated sensors for IZUMO1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031933Ensembl transcript IDs: ENSMUST00000034409.14, ENSMUST00000069408.10, ENSMUST00000117620.8, ENSMUST00000121116.8, ENSMUST00000148155.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGTGCTCTTCTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTaGTTGCTTCCTGTGTCTCAGAAGCTAAGAAAGGCAGGAGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: GGALLGRRTQWRGKG*LLPVSQKLRKAGGC Trigger: GCAACCTCCTGCCTTTCTTAGCTTCTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAGAAGAGCACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR GCA 90 bp | TCCTCAGGGAGACTAAATACTCTTTGTCCTTGGAGGAGCACTCTCTaGCCTTGGAGGAGCACTCTCTGTCCTTGGAGGTGCTCTTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SSGRLNTLCPWRSTL*PWRSTLCPWRCSSG Trigger: CCCAGAAGAGCACCTCCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 90 bp | GGGAGACTAAATACTCTTTGTCCTTGGAGGAGCACTCTCTGCCCTTaGAGGAGCACTCTCTGTCCTTGGAGGTGCTCTTCTGGGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GRLNTLCPWRSTLCP*RSTLCPWRCSSGKE Trigger: CTCCTTCCCAGAAGAGCACCTCCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 90 bp | GGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATaGCTGTGGACAGAAGAAGCGCCGGAGTCCTATAGTAGTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: GHVAWLSALSLSQKR*LWTEEAPESYSSAH Trigger: ATGGGCACTACTATAGGACTCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| 3UTR CCA 90 bp | AAAGCTGGAACTGCTTCCTCAGGGAGACTAAATACTCTTTGTCCTTaGAGGAGCACTCTCTGCCCTTGGAGGAGCACTCTCTGTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: KAGTASSGRLNTLCP*RSTLCPWRSTLCPW Trigger: CCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCTGAGGAAGCAGTTCCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR TCA 90 bp | CAGCACAATTCTGGAAGTTTCCTGATAACAGTTACCTCAGTCCTTTaGGTACAGCAAAGCTTAAGGCATGTTTACATTTGTAGCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: QHNSGSFLITVTSVL*VQQSLRHVYICSSF Trigger: GAAAGAGCTACAAATGTAAACATGCCTTAAGCTTTGCTGTACTCAAAGGACTGAGGTAACTGTTATCAGGAAACTTCCAGAATTGTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| 3UTR CCA 90 bp | AGAAGCAATTGTGTTCTTCAGAAAGGAGATCTTTTTAGAACAGTGTaGGATAAAGCTGGAACTGCTTCCTCAGGGAGACTAAATACTCTT | + |
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Preference number: 1 (lower is better) Translates to: RSNCVLQKGDLFRTV*DKAGTASSGRLNTL Trigger: AAGAGTATTTAGTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTCCTTTCTGAAGAACACAATTGCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CAA 90 bp | TCCTTGGAGGAGCACTCTCTGCCCTTGGAGGAGCACTCTCTGTCCTaGGAGGTGCTCTTCTGGGAAGGAGGACTCAGTGGAGAGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLEEHSLPLEEHSLS*EVLFWEGGLSGEAK Trigger: CTTTGCCTCTCCACTGAGTCCTCCTTCCCAGAAGAGCACCTCCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CAA 90 bp | GGTGCTCTTCTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTaGCTTCCTGTGTCTCAGAAGCTAAGAAAGGCAGGAGGTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GALLGRRTQWRGKGW*LPVSQKLRKAGGCR Trigger: CCTGCAACCTCCTGCCTTTCTTAGCTTCTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAGAAGAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGACTAAATACTCTTTGTCCTTGGAGGAGCACTCTCTGCCCTTGGAGGAGGGAAGGAGGACTCAGTaGAGAGGCAAAGGCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: RETKYSLSLEEHSLPLEEGRRTQ*RGKGWL Trigger: CAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCC...CTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR-3UTR TCA 90 bp | GGTCTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCTCACTTAGGCTGTTGTaGAGTGCCATCATCCATAGG | + |
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Preference number: 2 (lower is better) Translates to: GLGSMTEVNTVPVGVRIGSLRLL*SAIIHR Trigger: CCTATGGATGATGGCACTTCACAACAGCCTAAGTGA...GCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| 3UTR-3UTR GCA 90 bp | TCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGCATGAGAAATTCAGGTaGCAGCCTGCCCCCAACATG | + |
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Preference number: 2 (lower is better) Translates to: SLGCQHCLCHKRDGCGQKHEKFR*QPAPNM Trigger: CATGTTGGGGGCAGGCTGGCACCTGAATTTCTCATG...CTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| 3UTR-3UTR CCA 90 bp | GATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGACTAAGCACTCTCTGCCCTTaGAGGAGCACTCTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DLFRTVWDKAGTASSGRLSTLCP*RSTLCP Trigger: AGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCT...TAGTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CAA 90 bp | TTTATTGAAGGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATaGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGAAGCGCCG | + |
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Preference number: 2 (lower is better) Translates to: FIEGTMIGHVAWLSA*SLSQKRWLWTEEAP Trigger: CGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACCTTCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAAGCAATTGTGTTCTTCAGAAAGGAGATCTTTTTAGAACAGTGTGGGATTGGAGAGGCAAAGGCTaGTTGCTTCCTGTGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ARSNCVLQKGDLFRTVWDWRGKG*LLPVSQ Trigger: CTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCA...ATCCCACACTGTTCTAAAAAGATCTCCTTTCTGAAGAACACAATTGCTTCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCTTCAGAAAGGAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGAATACTCTTTGTCCTTaGAGGAGCACTCTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VFFRKEIFLEQCGIKLELNTLCP*RSTLCP Trigger: AGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATT...CAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTCCTTTCTGAAGAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 72 bp | CGTAGACTGCTGGGTACCAGCTGCCATCCAGACCAGTaGAGATGGAGCCAAGCATGGAGGGGACCCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RRLLGTSCHPDQ*RWSQAWRGPWE Trigger: CTCCCAGGGTCCCCTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAGTCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| 3UTR GCA 72 bp | AGACTAAATACTCTTTGTCCTTGGAGGAGCACTCTCTaGCCTTGGAGGAGCACTCTCTGTCCTTGGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: RLNTLCPWRSTL*PWRSTLCPWRC Trigger: GCACCTCCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 72 bp | ACTGCTTCCTCAGGGAGACTAAATACTCTTTGTCCTTaGAGGAGCACTCTCTGCCCTTGGAGGAGCACTCTC | + |
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Preference number: 3 (lower is better) Translates to: TASSGRLNTLCP*RSTLCPWRSTL Trigger: GAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCTGAGGAAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 72 bp | CTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTaGACAGAAGAAGCGCCGGAGTCCTATAGTAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: LSALSLSQKRWL*TEEAPESYSSA Trigger: GGCACTACTATAGGACTCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| 3UTR CCA 72 bp | GCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATaGCTGTGGACAGAAGAAGCGCCGGAGTCCTATAGT | + |
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Preference number: 3 (lower is better) Translates to: AWLSALSLSQKR*LWTEEAPESYS Trigger: ACTATAGGACTCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| 3UTR TCA 72 bp | GGCCCTAAGATAACACAGAGGTCACTTAGGCTGTTGTaGAGTGCCATCATCCATAGGGTTGGCTTCTATGGC | + |
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Preference number: 3 (lower is better) Translates to: GPKITQRSLRLL*SAIIHRVGFYG Trigger: GCCATAGAAGCCAACCCTATGGATGATGGCACTTCACAACAGCCTAAGTGACCTCTGTGTTATCTTAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| 3UTR GCA 72 bp | GAGGCTCAACTCTGTCTCAGCCTGTTCCAGCCTATATaGAACCAAATGGTGTTCTCTGAGTCCCAGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: EAQLCLSLFQPI*NQMVFSESQCH Trigger: ATGACACTGGGACTCAGAGAACACCATTTGGTTGCATATAGGCTGGAACAGGCTGAGACAGAGTTGAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR-3UTR CAA 90 bp | GTTCTTCAGAAAGGAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTGAGCACTCTCTGTCCTaGGAGGTGCTCTTCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VLQKGDLFRTVWDKAGTAEHSLS*EVLFWE Trigger: TTCCCAGAAGAGCACCTCCAAGGACAGAGAGTGCTC...AGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTCCTTTCTGAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR GCA 72 bp | ACCAAATGGTGTTCTCTGAGTCCCAGTGTCATTATCTaGAATCCAGGGTTGCTGAAGGATCAAATAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TKWCSLSPSVII*NPGLLKDQIEL Trigger: CAGCTCTATTTGATCCTTCAGCAACCCTGGATTGCAGATAATGACACTGGGACTCAGAGAACACCATTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CCA 72 bp | TCTGTCTCAGCCTGTTCCAGCCTATATGCAACCAAATaGTGTTCTCTGAGTCCCAGTGTCATTATCTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: SVSACSSLYATK*CSLSPSVIICN Trigger: ATTGCAGATAATGACACTGGGACTCAGAGAACACCATTTGGTTGCATATAGGCTGGAACAGGCTGAGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR TCA 72 bp | TCTGGAAGTTTCCTGATAACAGTTACCTCAGTCCTTTaGGTACAGCAAAGCTTAAGGCATGTTTACATTTGT | + |
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Preference number: 3 (lower is better) Translates to: SGSFLITVTSVL*VQQSLRHVYIC Trigger: ACAAATGTAAACATGCCTTAAGCTTTGCTGTACTCAAAGGACTGAGGTAACTGTTATCAGGAAACTTCCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGTACCAGCTGCCATCCAGACCAGTGGAGATGGAGCCAAGCATGGAGGGGCTTCCCAACTTGTaGAACGTGTGCAGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TAGYQLPSRPVEMEPSMEGLPNL*NVCSRH Trigger: ATGCCTGCTGCACACGTTCCACAAGTTGGGAAGCCC...CTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR CCA 90 bp | GGTCTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCTTTGGGACCACCGGCTaGATCCAAGGCCCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GLGSMTEVNTVPVGVRIGFGTTG*IQGPRL Trigger: CAACCTGGGGCCTTGGATCCAGCCGGTGGTCCCAAA...GCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CCA 90 bp | CTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCCTGTCCTCACAATCCTCCTaGCACAGCGGCACGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGSMTEVNTVPVGVRIGLSSQSS*HSGTPQ Trigger: TTGGGGCGTGCCGCTGTGCCAGGAGGATTGTGAGGA...CAGGCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGTACCAGCTGCCATCCAGACCAGTGGAGATGGAGCCAAGCATGGAGTTGGGGGAACACTCATaGAAGCAGATGGCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: TAGYQLPSRPVEMEPSMELGEHS*KQMAWM Trigger: CATCCAGGCCATCTGCTTCCATGAGTGTTCCCCCAA...CTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTTGCTTCCTGTGTCTCAGTTGATAGAAGACCCTTaGCCTCACTCCAGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGRRTQWRGKGWLLPVSQLIEDP*PHSSPS Trigger: GCTGGGACTGGAGTGAGGTCAAGGGTCTTCTATCAA...CTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS-3UTR CCA 90 bp | GGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCCTGGCCGTAGAGTTCGTCTTCTaGGCCAGGTTCTTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: GSMTEVNTVPVGVRIGLAVEFVF*ARFLLV Trigger: CACAAGCAAGAACCTGGCCCAGAAGACGAACTCTAC...GGCCAGGCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR GCA 90 bp | AGGATGGAGATGGCCATGGCCCAGAAGGATCAGGAAATGTGGGTTGGAGAGGGATCTGGGCCAGGTTCTTaGTTGTGGCGCTTGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: RMEMAMAQKDQEMWVGEGSGPGS*LWRLEF Trigger: GAATTCCAAGCGCCACAAGCAAGAACCTGGCCCAGA...TCCCTCTCCAACCCACATTTCCTGATCCTTCTGGGCCATGGCCATCTCCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR CCA 90 bp | TTCTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTTGCTTCCTGTGTCTCTTGGGGGAACACTCATaGAAGCAGATGGCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: FWEGGLSGEAKAGCFLCLLGEHS*KQMAWM Trigger: CATCCAGGCCATCTGCTTCCATGAGTGTTCCCCCAA...GAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS-3UTR CCA 90 bp | GGTCTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCTTGGGGGAACACTCATaGAAGCAGATGGCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: GLGSMTEVNTVPVGVRIGLGEHS*KQMAWM Trigger: CATCCAGGCCATCTGCTTCCATGAGTGTTCCCCCAA...GCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CCA 90 bp | CATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACATCCTCACAATCCTCCTaGCACAGCGGCACGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HVAWLSALSLSQKRWLWTSSQSS*HSGTPQ Trigger: TTGGGGCGTGCCGCTGTGCCAGGAGGATTGTGAGGA...TGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTTGCTTCCTGTGTCTCAGAAGTAGAGTTCGTCTTCTaGGCCAGGTTCTTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: GKEDSVERQRLVASCVSEVEFVF*ARFLLV Trigger: CACAAGCAAGAACCTGGCCCAGAAGACGAACTCTAC...TTCTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS-3UTR CCA 90 bp | GAAGGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAATTTGGGACCACCGGCTaGATCCAAGGCCCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EGTMIGHVAWLSALSLSQFGTTG*IQGPRL Trigger: CAACCTGGGGCCTTGGATCCAGCCGGTGGTCCCAAA...TTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
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| CDS-3UTR CCA 90 bp | GGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGTCCTCACAATCCTCCTaGCACAGCGGCACGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GTMIGHVAWLSALSLSQKSSQSS*HSGTPQ Trigger: TTGGGGCGTGCCGCTGTGCCAGGAGGATTGTGAGGA...CTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGAAGCGCCGGAGCACAGAGAGAAGGCTaGGAGGGTGTAAGAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSIVSVTKEMAVDRRSAGAQREG*EGVREL Trigger: CAGCTCTCTTACACCCTCCCAGCCTTCTCTCTGTGC...TCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR CCA 90 bp | GGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGTGCCATCCAGACCAGTaGAGATGGAGCCAAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: GHVAWLSALSLSQKRWLWCHPDQ*RWSQAW Trigger: CCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCA...CCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
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| 3UTR CAA 72 bp | AAATACTCTTTGTCCTTGGAGGAGCACTCTCTGCCCTaGGAGGAGCACTCTCTGTCCTTGGAGGTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KYSLSLEEHSLP*EEHSLSLEVLF Trigger: GAAGAGCACCTCCAAGGACAGAGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| 3UTR CAA 72 bp | AGCTGGAACTGCTTCCTCAGGGAGACTAAATACTCTTaGTCCTTGGAGGAGCACTCTCTGCCCTTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SWNCFLRETKYS*SLEEHSLPLEE Trigger: CTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCTGAGGAAGCAGTTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS-3UTR TCA 90 bp | ATGAATAGCCTGAGGATGGAGATGGCCATGGCCCAGAAGGATCAGGAAATGTGGGCTCGGGACTGGCCTTaGATGTGTTGTTCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: MNSLRMEMAMAQKDQEMWARDWP*MCCSRS Trigger: AGATCTGGAACAACACATTCAAGGCCAGTCCCGAGC...CCACATTTCCTGATCCTTCTGGGCCATGGCCATCTCCATCCTCAGGCTATTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR TCA 90 bp | CTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCCTGCCTCTTCTGCAGTCTTaGCAAGTACTTTGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGSMTEVNTVPVGVRIGLPLLQS*QVLWMV Trigger: CACCATCCAAAGTACTTGTCAAGACTGCAGAAGAGG...CAGGCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR GCA 90 bp | AGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGGCTCAAACCACTTCTaGAGACACCGCCCACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RTCRLAVSIVSVTKEMAVGSNHF*RHRPLF Trigger: GAACAGTGGGCGGTGTCTGCAGAAGTGGTTTGAGCC...CACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS-3UTR CCA 90 bp | ACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATTTGGGACCACCGGCTaGATCCAAGGCCCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TMIGHVAWLSALSLSQKRFGTTG*IQGPRL Trigger: CAACCTGGGGCCTTGGATCCAGCCGGTGGTCCCAAA...TCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | GAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGACTCCTCACAATCCTCCTaGCACAGCGGCACGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIFLEQCGIKLELLPQGDSSQSS*HSGTPQ Trigger: TTGGGGCGTGCCGCTGTGCCAGGAGGATTGTGAGGA...GTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCCTGGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSMTEVNTVPVGVRIGLVSSPQ*IMLKLK Trigger: CTTTAACTTCAGCATGATGCACTGTGGACTGCTGAC...CAGGCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| CDS-3UTR CCA 90 bp | GACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGATTGGGGGAACACTCATaGAAGCAGATGGCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DMSLGCQHCLCHKRDGCGLGEHS*KQMAWM Trigger: CATCCAGGCCATCTGCTTCCATGAGTGTTCCCCCAA...TCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGAAGCGCCGACAGGTCATCCGGGGTaGGGAAGTGATACGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSALSLSQKRWLWTEEAPTGHPG*GSDTKK Trigger: CTTTTTCGTATCACTTCCCCACCCCGGATGACCTGT...CGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS-3UTR CCA 90 bp | ACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGACCAGACCAGTGGAGATaGAGCCAAGCATGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMIGHVAWLSALSLSQKRPDQWR*SQAWRG Trigger: TCCCCTCCATGCTTGGCTCCATCTCCACTGGTCTGG...TCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
||
| 3UTR CAA 72 bp | AACTGCTTCCTCAGGGAGACTAAATACTCTTTGTCCTaGGAGGAGCACTCTCTGCCCTTGGAGGAGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCFLRETKYSLS*EEHSLPLEEHS Trigger: AGAGTGCTCCTCCAAGGGCAGAGAGTGCTCCTCCAAGGACAAAGAGTATTTAGTCTCCCTGAGGAAGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR GCA 90 bp | ACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGTCCTCCCAAGGCCTaGACTCCTGGTAGAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TMIGHVAWLSALSLSQKRCPPKA*TPGRVR Trigger: ACGAACTCTACCAGGAGTGCAGGCCTTGGGAGGACA...TCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGGGAGCATGACTGAGGTAAACACAGTGCCAGTGGGTGTCAGGATTGGCAGCCATGGAGCCAGTTaGATTTACAAGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLGSMTEVNTVPVGVRIGSHGAS*IYKSKM Trigger: CATCTTTGACTTGTAAATCCAACTGGCTCCATGGCT...GCCAATCCTGACACCCACTGGCACTGTGTTTACCTCAGTCATGCTCCCTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGAAATTCATGCAGACGCTaGGCAGTTTGTCCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMIGHVAWLSALSLSQKRNSCRR*AVCPLP Trigger: TGGCAGGGGACAAACTGCTCAGCGTCTGCATGAATT...TCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGACAATTCATGCAGACGCTaGGCAGTTTGTCCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIFLEQCGIKLELLPQGDNSCRR*AVCPLP Trigger: TGGCAGGGGACAAACTGCTCAGCGTCTGCATGAATT...GTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR TCA 90 bp | ATTGAAGGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCAAATTCATGCAGACGCTaGGCAGTTTGTCCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IEGTMIGHVAWLSALSLSNSCRR*AVCPLP Trigger: TGGCAGGGGACAAACTGCTCAGCGTCTGCATGAATT...TGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACCTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATCTGGGCCAGGTTCTTaGTTGTGGCGCTTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TMIGHVAWLSALSLSQKRSGPGS*LWRLEF Trigger: GAATTCCAAGCGCCACAAGCAAGAACCTGGCCCAGA...TCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAGTAGAGTTCGTCTTCTaGGCCAGGTTCTTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGTMIGHVAWLSALSLSQVEFVF*ARFLLV Trigger: CACAAGCAAGAACCTGGCCCAGAAGACGAACTCTAC...TTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGGTAGAGTTCGTCTTCTaGGCCAGGTTCTTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IGHVAWLSALSLSQKRWLVEFVF*ARFLLV Trigger: CACAAGCAAGAACCTGGCCCAGAAGACGAACTCTAC...CAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCAGAAAGGAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTTTGGGACCACCGGCTaGATCCAAGGCCCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLQKGDLFRTVWDKAGTAFGTTG*IQGPRL Trigger: CAACCTGGGGCCTTGGATCCAGCCGGTGGTCCCAAA...AGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTCCTTTCTGAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| 3UTR CAA 72 bp | GGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATaGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTMIGHVAWLSA*SLSQKRWLWTE Trigger: TTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR GCA 90 bp | GATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGACTATCTGGGCCAGGTTCTTaGTTGTGGCGCTTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: DLFRTVWDKAGTASSGRLSGPGS*LWRLEF Trigger: GAATTCCAAGCGCCACAAGCAAGAACCTGGCCCAGA...TAGTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR CCA 90 bp | ATGAATAGCCTGAGGATGGAGATGGCCATGGCCCAGAAGGATCAGGAAATGTGGAGCCATGGAGCCAGTTaGATTTACAAGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNSLRMEMAMAQKDQEMWSHGAS*IYKSKM Trigger: CATCTTTGACTTGTAAATCCAACTGGCTCCATGGCT...CCACATTTCCTGATCCTTCTGGGCCATGGCCATCTCCATCCTCAGGCTATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS-3UTR CCA 90 bp | GGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGAGCCATGGAGCCAGTTaGATTTACAAGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHVAWLSALSLSQKRWLWSHGAS*IYKSKM Trigger: CATCTTTGACTTGTAAATCCAACTGGCTCCATGGCT...CCACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCACAATTCTGGAAGTTTCCTGATAACAGTTACCTCAGTCCTTTGAGTAATTCATGCAGACGCTaGGCAGTTTGTCCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STAQFWKFPDNSYLSPLSNSCRR*AVCPLP Trigger: TGGCAGGGGACAAACTGCTCAGCGTCTGCATGAATT...ACTCAAAGGACTGAGGTAACTGTTATCAGGAAACTTCCAGAATTGTGCTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| CDS-3UTR GCA 90 bp | GGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTMIGHVAWLSALSLSQKVSSPQ*IMLKLK Trigger: CTTTAACTTCAGCATGATGCACTGTGGACTGCTGAC...CTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGACGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EIFLEQCGIKLELLPQGDVSSPQ*IMLKLK Trigger: CTTTAACTTCAGCATGATGCACTGTGGACTGCTGAC...GTCTCCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR GCA 90 bp | TACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YHDRTCRLAVSIVSVTKEVSSPQ*IMLKLK Trigger: CTTTAACTTCAGCATGATGCACTGTGGACTGCTGAC...CTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCATAAAGATGTGTTCTGTGGACTCAGAAACAGTGCTCACAATAAAGGTTCTGGGCCAGGTTCTTaGTTGTGGCGCTTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFHKDVFCGLRNSAHNKGSGPGS*LWRLEF Trigger: GAATTCCAAGCGCCACAAGCAAGAACCTGGCCCAGA...ACCTTTATTGTGAGCACTGTTTCTGAGTCCACAGAACACATCTTTATGAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGATCTTTTTAGAACAGTGTGGGATAAAGCTGGAACTGCTTCCTCAGGGAGCCATGGAGCCAGTTaGATTTACAAGTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KGDLFRTVWDKAGTASSGSHGAS*IYKSKM Trigger: CATCTTTGACTTGTAAATCCAACTGGCTCCATGGCT...CCCTGAGGAAGCAGTTCCAGCTTTATCCCACACTGTTCTAAAAAGATCTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS-3UTR GCA 90 bp | GTACAGCAAAGCTTAAGGCATGTTTACATTTGTAGCTCTTTCATAAAGATGTGTGTACTTTGGATGGTGTaGCATTTTCCTCACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQQSLRHVYICSSFIKMCVLWMV*HFPHSS Trigger: ACTGGAGTGAGGAAAATGGCACACCATCCAAAGTAC...ACACATCTTTATGAAAGAGCTACAAATGTAAACATGCCTTAAGCTTTGCTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| 3UTR CAA 72 bp | TTCTGGAAGTTTCCTGATAACAGTTACCTCAGTCCTTaGAGTACAGCAAAGCTTAAGGCATGTTTACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWKFPDNSYLSP*STAKLKACLHL Trigger: CAAATGTAAACATGCCTTAAGCTTTGCTGTACTCAAAGGACTGAGGTAACTGTTATCAGGAAACTTCCAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
||
| CDS GCA 90 bp | CAGTCCTCACAATCCTCCTGGCACAGCGGCACGCCCCAAACCCGCTaGTCTTCCTGCCCGTTTGGGACCACCGGCTGGATCCAAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSQSSWHSGTPQTR*SSCPFGTTGWIQGP Trigger: GGGGCCTTGGATCCAGCCGGTGGTCCCAAACGGGCAGGAAGAGCAGCGGGTTTGGGGCGTGCCGCTGTGCCAGGAGGATTGTGAGGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
||
| CDS CCA 90 bp | CACCGTAGACTGCTGGGTACCAGCTGCCATCCAGACCAGTGGAGATaGAGCCAAGCATGGAGGGGACCCCTCACTCCAGTCCCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HRRLLGTSCHPDQWR*SQAWRGPLTPVPAM Trigger: CATGGCTGGGACTGGAGTGAGGGGTCCCCTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAGTCTACGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGTAAAGGCAGGAGAAATGAGGCACCGTAGACTGCTGGGTACCAGCTGCGCTCTTCCTGCCCGTTaGGGACCACCGGCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: PFVKAGEMRHRRLLGTSCALPAR*GPPAGS Trigger: GGATCCAGCCGGTGGTCCCAAACGGGCAGGAAGAGC...GCAGCTGGTACCCAGCAGTCTACGGTGCCTCATTTCTCCTGCCTTTACAAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS TCA 90 bp | ACTTCTGCAGACACCGCCCACTGTTCCTGCGCTCGGGACTGGCCTTaGATGTGTTGTTCCAGATCTTCTCACACAGGTCATCCGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSADTAHCSCARDWP*MCCSRSSHTGHPGW Trigger: CCACCCCGGATGACCTGTGTGAGAAGATCTGGAACAACACATTCAAGGCCAGTCCCGAGCGCAGGAACAGTGGGCGGTGTCTGCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS GCA 90 bp | GCCTGGATGAAGTGCTTGCGACAGGCCGGGGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAGAGCAAGGGCTCCTCAAGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWMKCLRQAGVSSPQ*IMLKLKSKGSSRWA Trigger: AGCCCACCTTGAGGAGCCCTTGCTCTTTAACTTCAGCATGATGCACTGTGGACTGCTGACCCCGGCCTGTCGCAAGCACTTCATCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
||
| CDS CCA 90 bp | CAGTCCCAGCCATGGAGCCAGTTGGATTTACAAGTCAAAGATGAGTaGCAGGCTCGCCACCAGTCCTCACAATCCTCCTGGCACAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSQPWSQLDLQVKDE*QARHQSSQSSWHSG Trigger: GCCGCTGTGCCAGGAGGATTGTGAGGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 |
||
| CDS CCA 90 bp | GATGGAGCCAAGCATGGAGGGGACCCCTCACTCCAGTCCCAGCCATaGAGCCAGTTGGATTTACAAGTCAAAGATGAGTGGCAGGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: DGAKHGGDPSLQSQP*SQLDLQVKDEWQAR Trigger: GCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGGGTCCCCTCCATGCTTGGCTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
||
| CDS GCA 90 bp | CCCAACTTGTGGAACGTGTGCAGCAGGCATTGTCCTCCCAAGGCCTaGACTCCTGGTAGAGTTCGTCTTCTGGGCCAGGTTCTTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PNLWNVCSRHCPPKA*TPGRVRLLGQVLAC Trigger: ACAAGCAAGAACCTGGCCCAGAAGACGAACTCTACCAGGAGTGCAGGCCTTGGGAGGACAATGCCTGCTGCACACGTTCCACAAGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTTGCTTCCTGTGTCTCAATCCAAGGCCCCAGGTaGGGGGAACACTCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKEDSVERQRLVASCVSIQGPR*GEHSWK Trigger: CTTCCATGAGTGTTCCCCCAACCTGGGGCCTTGGAT...TGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
||
| CDS TCA 90 bp | ACTCCAGTCCCAGCCATGGAGCCAGTTGGATTTACAAGTCAAAGATaGGTGGCAGGCTCGCCACCAGTCCTCACAATCCTCCTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPVPAMEPVGFTSQR*VAGSPPVLTILLAQ Trigger: CTGTGCCAGGAGGATTGTGAGGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 |
||
| CDS CCA 90 bp | CCACAGTGCATCATGCTGAAGTTAAAGAGCAAGGGCTCCTCAAGGTaGGCTTCCCAACTTGTGGAACGTGTGCAGCAGGCATTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQCIMLKLKSKGSSR*ASQLVERVQQALSS Trigger: GGAGGACAATGCCTGCTGCACACGTTCCACAAGTTGGGAAGCCCACCTTGAGGAGCCCTTGCTCTTTAACTTCAGCATGATGCACTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
||
| CDS CCA 90 bp | GGCAGTGTTTCTTCTCCTCACTCCAGTCCCAGCCATGGAGCCAGTTaGATTTACAAGTCAAAGATGAGTGGCAGGCTCGCCACCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSVSSPHSSPSHGAS*IYKSKMSGRLATSP Trigger: AGGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGAGAAGAAACACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS-3UTR CAA 90 bp | AGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGATCCAAGGCCCCAGGTaGGGGGAACACTCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RTCRLAVSIVSVTKEMAVIQGPR*GEHSWK Trigger: CTTCCATGAGTGTTCCCCCAACCTGGGGCCTTGGAT...CACAGCCATCTCTTTTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGAAGCGCCGGACGCTCGGGACTGGCCTaGAATGTGTTGTTCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VSIVSVTKEMAVDRRSAGRSGLA*NVLFQI Trigger: GATCTGGAACAACACATTCAAGGCCAGTCCCGAGCG...TCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS-3UTR CAA 90 bp | GAAGGTACCATGATAGGACATGTCGCTTGGCTGTCAGCATTGTCTCTGTCACAAATCCAAGGCCCCAGGTaGGGGGAACACTCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGTMIGHVAWLSALSLSQIQGPR*GEHSWK Trigger: CTTCCATGAGTGTTCCCCCAACCTGGGGCCTTGGAT...TTGTGACAGAGACAATGCTGACAGCCAAGCGACATGTCCTATCATGGTACCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
||
| CDS-3UTR CAA 90 bp | AGATGGCCATGGCCCAGAAGGATCAGGAAATGTGGGTTGGAGAGGGAAGCAGGGCAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWPWPRRIRKCGLEREAGQPWSQ*DLQVKD Trigger: ATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTG...CCCTGCTTCCCTCTCCAACCCACATTTCCTGATCCTTCTGGGCCATGGCCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAGGAGGACTCAGTGGAGAGGCAAAGGCTGGTTGCTTCCTGTGTCTCAGCAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGRRTQWRGKGWLLPVSQQPWSQ*DLQVKD Trigger: ATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTG...CTGAGACACAGGAAGCAACCAGCCTTTGCCTCTCCACTGAGTCCTCCTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS CCA 90 bp | AGTACTTTGGATGGTGTGCCATTTTCCTCACTCCAGTCCCAGCCATaGAGCCAGTTGGATTTACAAGTCAAAGATGAGTGGCAGGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: STLDGVPFSSLQSQP*SQLDLQVKDEWQAR Trigger: GCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGAAAATGGCACACCATCCAAAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CAA 90 bp | TTCTGTGGACTCAGAAACAGTGCTCACAATAAAGGTCTAGGGAGCATGACTGAGATCCAAGGCCCCAGGTaGGGGGAACACTCATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FCGLRNSAHNKGLGSMTEIQGPR*GEHSWK Trigger: CTTCCATGAGTGTTCCCCCAACCTGGGGCCTTGGAT...CTCAGTCATGCTCCCTAGACCTTTATTGTGAGCACTGTTTCTGAGTCCACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS-3UTR CAA 90 bp | CAGCATTGTCTCTGTCACAAAAGAGATGGCTGTGGACAGAAGAAGCGCCGGAGTCAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QHCLCHKRDGCGQKKRRSQPWSQ*DLQVKD Trigger: ATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTG...ACTCCGGCGCTTCTTCTGTCCACAGCCATCTCTTTTGTGACAGAGACAATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034409.14 ENSMUST00000121116.8 |
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| CDS-3UTR CAA 90 bp | TGTAGCTCTTTCATAAAGATGTGTTCTGTGGACTCAGAAACAGTGCTCACAATACAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: CSSFIKMCSVDSETVLTIQPWSQ*DLQVKD Trigger: ATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTG...TATTGTGAGCACTGTTTCTGAGTCCACAGAACACATCTTTATGAAAGAGCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS GCA 72 bp | TGGCACAGCGGCACGCCCCAAACCCGCTGCTCTTCCTaGCCGTTTGGGACCACCGGCTGGATCCAAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WHSGTPQTRCSS*PFGTTGWIQGP Trigger: GGGGCCTTGGATCCAGCCGGTGGTCCCAAACGGGCAGGAAGAGCAGCGGGTTTGGGGCGTGCCGCTGTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS GCA 72 bp | CAATCCTCCTGGCACAGCGGCACGCCCCAAACCCGCTaGTCTTCCTGCCCGTTTGGGACCACCGGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: QSSWHSGTPQTR*SSCPFGTTGWI Trigger: GATCCAGCCGGTGGTCCCAAACGGGCAGGAAGAGCAGCGGGTTTGGGGCGTGCCGCTGTGCCAGGAGGATTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CCA 72 bp | CTGCTGGGTACCAGCTGCCATCCAGACCAGTGGAGATaGAGCCAAGCATGGAGGGGACCCCTCACTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LLGTSCHPDQWR*SQAWRGPLTPV Trigger: GACTGGAGTGAGGGGTCCCCTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
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| CDS CAA 90 bp | TGTGGGGCTAAGGCAGAGCCGGCAAAGTGGAGGGCCACTTCCACGTaGGGGTTGCTAAGGGTGGGCTCAAACCACTTCTGCAGACACCGC | + |
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Preference number: 6 (lower is better) Translates to: CGAKAEPAKWRATST*GLLRVGSNHFCRHR Trigger: GCGGTGTCTGCAGAAGTGGTTTGAGCCCACCCTTAGCAACCCCAACGTGGAAGTGGCCCTCCACTTTGCCGGCTCTGCCTTAGCCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS TCA 72 bp | GGTTGGGGGAACACTCATGGAAGCAGATGGCCTGGATaGAGTGCTTGCGACAGGCCGGGGTCAGCAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GWGNTHGSRWPG*SACDRPGSAVH Trigger: GTGGACTGCTGACCCCGGCCTGTCGCAAGCACTTCATCCAGGCCATCTGCTTCCATGAGTGTTCCCCCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CCA 72 bp | CGTAGACTGCTGGGTACCAGCTGCCATCCAGACCAGTaGAGATGGAGCCAAGCATGGAGGGGACCCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: RRLLGTSCHPDQ*RWSQAWRGPLT Trigger: AGTGAGGGGTCCCCTCCATGCTTGGCTCCATCTCCACTGGTCTGGATGGCAGCTGGTACCCAGCAGTCTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121116.8 |
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| CDS GCA 72 bp | GCTCCTCAAGGTGGGCTTCCCAACTTGTGGAACGTGTaGAGCAGGCATTGTCCTCCCAAGGCCTGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: APQGGLPNLWNV*SRHCPPKACTP Trigger: AGGAGTGCAGGCCTTGGGAGGACAATGCCTGCTGCACACGTTCCACAAGTTGGGAAGCCCACCTTGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CCA 72 bp | AGAGCAAGGGCTCCTCAAGGTGGGCTTCCCAACTTGTaGAACGTGTGCAGCAGGCATTGTCCTCCCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RARAPQGGLPNL*NVCSRHCPPKA Trigger: GGCCTTGGGAGGACAATGCCTGCTGCACACGTTCCACAAGTTGGGAAGCCCACCTTGAGGAGCCCTTGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CAA 72 bp | GAGCCGGCAAAGTGGAGGGCCACTTCCACGTTGGGGTaGCTAAGGGTGGGCTCAAACCACTTCTGCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: EPAKWRATSTLG*LRVGSNHFCRH Trigger: GTGTCTGCAGAAGTGGTTTGAGCCCACCCTTAGCAACCCCAACGTGGAAGTGGCCCTCCACTTTGCCGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS CAA 72 bp | AAGGCAGAGCCGGCAAAGTGGAGGGCCACTTCCACGTaGGGGTTGCTAAGGGTGGGCTCAAACCACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KAEPAKWRATST*GLLRVGSNHFC Trigger: GCAGAAGTGGTTTGAGCCCACCCTTAGCAACCCCAACGTGGAAGTGGCCCTCCACTTTGCCGGCTCTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS GCA 72 bp | TGGAACGTGTGCAGCAGGCATTGTCCTCCCAAGGCCTaGACTCCTGGTAGAGTTCGTCTTCTGGGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: WNVCSRHCPPKA*TPGRVRLLGQV Trigger: AACCTGGCCCAGAAGACGAACTCTACCAGGAGTGCAGGCCTTGGGAGGACAATGCCTGCTGCACACGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CAA 72 bp | CCACTGTTCCTGCGCTCGGGACTGGCCTTGAATGTGTaGTTCCAGATCTTCTCACACAGGTCATCCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLFLRSGLALNV*FQIFSHRSSGV Trigger: CACCCCGGATGACCTGTGTGAGAAGATCTGGAACAACACATTCAAGGCCAGTCCCGAGCGCAGGAACAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS CAA 90 bp | GGGCAGTGTTTCTTCTCCTCACTCCAGTCCCAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGATGAGTGGCAGGCTCGCCACCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GQCFFSSLQSQPWSQ*DLQVKDEWQARHQS Trigger: GGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGAGAAGAAACACTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS TCA 72 bp | GACACCGCCCACTGTTCCTGCGCTCGGGACTGGCCTTaGATGTGTTGTTCCAGATCTTCTCACACAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: DTAHCSCARDWP*MCCSRSSHTGH Trigger: ATGACCTGTGTGAGAAGATCTGGAACAACACATTCAAGGCCAGTCCCGAGCGCAGGAACAGTGGGCGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS GCA 72 bp | AAGTGCTTGCGACAGGCCGGGGTCAGCAGTCCACAGTaGATCATGCTGAAGTTAAAGAGCAAGGGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KCLRQAGVSSPQ*IMLKLKSKGSS Trigger: TGAGGAGCCCTTGCTCTTTAACTTCAGCATGATGCACTGTGGACTGCTGACCCCGGCCTGTCGCAAGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CAA 90 bp | GATAGAAGACCCTTGACCTCACTCCAGTCCCAGCCATGGAGCCAGTaGGATTTACAAGTCAAAGATGAGTGGCAGGCTCGCCACCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: DRRPLTSLQSQPWSQ*DLQVKDEWQARHQS Trigger: GGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGTCAAGGGTCTTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS TCA 72 bp | CCAGCCATGGAGCCAGTTGGATTTACAAGTCAAAGATaGGTGGCAGGCTCGCCACCAGTCCTCACAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: PAMEPVGFTSQR*VAGSPPVLTIL Trigger: GAGGATTGTGAGGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 |
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| CDS CCA 72 bp | CCATGGAGCCAGTTGGATTTACAAGTCAAAGATGAGTaGCAGGCTCGCCACCAGTCCTCACAATCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PWSQLDLQVKDE*QARHQSSQSSW Trigger: CCAGGAGGATTGTGAGGACTGGTGGCGAGCCTGCCACTCATCTTTGACTTGTAAATCCAACTGGCTCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 |
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| CDS CCA 72 bp | ATCATGCTGAAGTTAAAGAGCAAGGGCTCCTCAAGGTaGGCTTCCCAACTTGTGGAACGTGTGCAGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IMLKLKSKGSSR*ASQLVERVQQA Trigger: TGCCTGCTGCACACGTTCCACAAGTTGGGAAGCCCACCTTGAGGAGCCCTTGCTCTTTAACTTCAGCATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034409.14 ENSMUST00000069408.10 ENSMUST00000117620.8 ENSMUST00000121116.8 ENSMUST00000148155.2 |
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| CDS CCA 72 bp | TGTTGTTCCAGATCTTCTCACACAGGTCATCCGGGGTaGGGAAGTGATACGAAAAAGGGAGGCAGGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CCSRSSHTGHPG*GSDTKKGGRAH Trigger: ATGAGCCCTGCCTCCCTTTTTCGTATCACTTCCCCACCCCGGATGACCTGTGTGAGAAGATCTGGAACAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034409.14 |
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| CDS CAA 72 bp | CACCTCCTATCCTCTTCTGCAGTCTTGACAAGTACTTaGGATGGTGTGCCATTTTCCTCACTCCAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HLLSSSAVLTST*DGVPFSSLQSQ Trigger: CTGGGACTGGAGTGAGGAAAATGGCACACCATCCAAAGTACTTGTCAAGACTGCAGAAGAGGATAGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117620.8 |
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| CDS CAA 72 bp | AGTTCTATAAACGGTAGTCTCATTGATAGAAGACCCTaGACCTCACTCCAGTCCCAGCCATGGAGCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSINGSLIDRRP*TSLQSQPWSQL Trigger: CAACTGGCTCCATGGCTGGGACTGGAGTGAGGTCAAGGGTCTTCTATCAATGAGACTACCGTTTATAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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| CDS CAA 90 bp | GGCAGTGGTAGTTCTATAAACGGTAGTCTCATTGATAGAAGACCCTaGACCTCACTCCAGTCCCAGCCATGGAGCCAGTTGGATTTACAA | + |
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Preference number: 6 (lower is better) Translates to: GSGSSINGSLIDRRP*TSLQSQPWSQLDLQ Trigger: TTGTAAATCCAACTGGCTCCATGGCTGGGACTGGAGTGAGGTCAAGGGTCTTCTATCAATGAGACTACCGTTTATAGAACTACCACTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069408.10 |
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