Pregenerated sensors for IZUMO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064158Ensembl transcript IDs: ENSMUST00000033100.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCGGGTACAGCTCCGACTCTGGCTCCTGCCCCGGTGGTGTCTGTaGAGTCACGTGGACAGGAGTCTCGTGCTCCTCTTGGGTTATGAT | + |
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Preference number: 5 (lower is better) Translates to: LRVQLRLWLLPRWCL*SHVDRSLVLLLGYD Trigger: ATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGACACCACCGGGGCAGGAGCCAGAGTCGGAGCTGTACCCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS GCA 90 bp | TCCTGCCCCGGTGGTGTCTGTGGAGTCACGTGGACAGGAGTCTCGTaGTCCTCTTGGGTTATGATGTTCGGTGGTTGGTTTTCCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SCPGGVCGVTWTGVS*SSWVMMFGGWFSSE Trigger: TTCAGAGGAAAACCAACCACCGAACATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGACACCACCGGGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 90 bp | GGTGGTGTCTGTGGAGTCACGTGGACAGGAGTCTCGTGCTCCTCTTaGGTTATGATGTTCGGTGGTTGGTTTTCCTCTGAATGCTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GGVCGVTWTGVSCSS*VMMFGGWFSSECFG Trigger: CCCAAAGCATTCAGAGGAAAACCAACCACCGAACATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGACACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 90 bp | TGTTTTCGAAAGTCTTTAGCGCATCTGTCACAAACTGGTCACATTTaGTGCAGGGCCTCCCTGGACACAGGCAGTTGGCAAGAGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CFRKSLAHLSQTGHI*CRASLDTGSWQELP Trigger: TGGCAGCTCTTGCCAACTGCCTGTGTCCAGGGAGGCCCTGCATCAAATGTGACCAGTTTGTGACAGATGCGCTAAAGACTTTCGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 90 bp | TCTGTGGAGTCACGTGGACAGGAGTCTCGTGCTCCTCTTGGGTTATaGTGTTCGGTGGTTGGTTTTCCTCTGAATGCTTTGGGGGCAATA | + |
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Preference number: 5 (lower is better) Translates to: SVESRGQESRAPLGL*CSVVGFPLNALGAI Trigger: TATTGCCCCCAAAGCATTCAGAGGAAAACCAACCACCGAACATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 90 bp | GTAGTTGCCAGCATCCTCTGGACCCACCATCGACTTGGTCAGATATaGTTCTTTCCCCTTGGCAATCAAGGTCTCAGAACTGTTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VVASILWTHHRLGQI*FFPLGNQGLRTVLP Trigger: TGGGAGAACAGTTCTGAGACCTTGATTGCCAAGGGGAAAGAACCATATCTGACCAAGTCGATGGTGGGTCCAGAGGATGCTGGCAACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS GCA 90 bp | CAAATGTGCAACTGCTTTTCGCACTTAAGACACCAGATCAAAGTCTaGGACATCACTCCGCATTTGTTGGGACAAAGAACTTCCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: QMCNCFSHLRHQIKV*DITPHLLGQRTSFW Trigger: CCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGATGTCGCAGACTTTGATCTGGTGTCTTAAGTGCGAAAAGCAGTTGCACATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | TCTGGCTCCTGCCCCGGTGGTGTCTGTGGAGTCACGTaGACAGGAGTCTCGTGCTCCTCTTGGGTTATGATG | + |
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Preference number: 6 (lower is better) Translates to: SGSCPGGVCGVT*TGVSCSSWVMM Trigger: CATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGACACCACCGGGGCAGGAGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | TGTCACAAACTGGTCACATTTGATGCAGGGCCTCCCTaGACACAGGCAGTTGGCAAGAGCTGCCAGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CHKLVTFDAGPP*TQAVGKSCQQE Trigger: CTCTTGCTGGCAGCTCTTGCCAACTGCCTGTGTCCAGGGAGGCCCTGCATCAAATGTGACCAGTTTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | TCACATTTGATGCAGGGCCTCCCTGGACACAGGCAGTaGGCAAGAGCTGCCAGCAAGAGTGTAAAATGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SHLMQGLPGHRQ*ARAASKSVKCG Trigger: GCCGCATTTTACACTCTTGCTGGCAGCTCTTGCCAACTGCCTGTGTCCAGGGAGGCCCTGCATCAAATGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS GCA 72 bp | GGTGGTGTCTGTGGAGTCACGTGGACAGGAGTCTCGTaGTCCTCTTGGGTTATGATGTTCGGTGGTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GGVCGVTWTGVS*SSWVMMFGGWF Trigger: AAACCAACCACCGAACATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGACTCCACAGACACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | GGTAGTTGCCAGCATCCTCTGGACCCACCATCGACTTaGTCAGATATGGTTCTTTCCCCTTGGCAATCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSCQHPLDPPST*SDMVLSPWQSR Trigger: CCTTGATTGCCAAGGGGAAAGAACCATATCTGACCAAGTCGATGGTGGGTCCAGAGGATGCTGGCAACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 90 bp | GTGTTTTCGAAAGTCTTTAGCGCATCTGTCACAAACTGGTCACATTaGATGCAGGGCCTCCCTGGACACAGGCAGTTGGCAAGAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VFSKVFSASVTNWSH*MQGLPGHRQLARAA Trigger: GGCAGCTCTTGCCAACTGCCTGTGTCCAGGGAGGCCCTGCATCAAATGTGACCAGTTTGTGACAGATGCGCTAAAGACTTTCGAAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 72 bp | AAGTCTTTAGCGCATCTGTCACAAACTGGTCACATTTaGTGCAGGGCCTCCCTGGACACAGGCAGTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: KSLAHLSQTGHI*CRASLDTGSWQ Trigger: TTGCCAACTGCCTGTGTCCAGGGAGGCCCTGCATCAAATGTGACCAGTTTGTGACAGATGCGCTAAAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 72 bp | GAGGCCTTCTTCAATCCCATCTGTTGGGACAAACTCTaGTCTGACTTGGATCCTGACGCGGTGGGTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: EAFFNPICWDKL*SDLDPDAVGLT Trigger: AGTCAAACCCACCGCGTCAGGATCCAAGTCAGATCAGAGTTTGTCCCAACAGATGGGATTGAAGAAGGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 72 bp | TCACGTGGACAGGAGTCTCGTGCTCCTCTTGGGTTATaGTGTTCGGTGGTTGGTTTTCCTCTGAATGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRGQESRAPLGL*CSVVGFPLNAL Trigger: CAAAGCATTCAGAGGAAAACCAACCACCGAACATCATAACCCAAGAGGAGCACGAGACTCCTGTCCACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | CCACCATCGACTTGGTCAGATATGGTTCTTTCCCCTTaGCAATCAAGGTCTCAGAACTGTTCTCCCAAACCC | + |
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Preference number: 6 (lower is better) Translates to: PPSTWSDMVLSP*QSRSQNCSPKP Trigger: GGGTTTGGGAGAACAGTTCTGAGACCTTGATTGCCAAGGGGAAAGAACCATATCTGACCAAGTCGATGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | CCCACCATCGACTTGGTCAGATATGGTTCTTTCCCCTaGGCAATCAAGGTCTCAGAACTGTTCTCCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: PTIDLVRYGSFP*AIKVSELFSQT Trigger: GGTTTGGGAGAACAGTTCTGAGACCTTGATTGCCAAGGGGAAAGAACCATATCTGACCAAGTCGATGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 90 bp | ACTGTCTGTAATACGCTTCAGATCCTTCAGAAAACTCCAGGTTGCTaGTTCCAGTGTGTTCTCGTCCACGGCCCCCAAATAGGAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: TVCNTLQILQKTPGC*FQCVLVHGPQIGIL Trigger: GAGGATTCCTATTTGGGGGCCGTGGACGAGAACACACTGGAACAAGCAACCTGGAGTTTTCTGAAGGATCTGAAGCGTATTACAGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | AATACGCTTCAGATCCTTCAGAAAACTCCAGGTTGCTaGTTCCAGTGTGTTCTCGTCCACGGCCCCCAAATA | + |
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Preference number: 6 (lower is better) Translates to: NTLQILQKTPGC*FQCVLVHGPQI Trigger: TATTTGGGGGCCGTGGACGAGAACACACTGGAACAAGCAACCTGGAGTTTTCTGAAGGATCTGAAGCGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS GCA 72 bp | CTCGCTCTTATCTCCAGAGTAGTCAGAGTTAAAATCTaGCTGAGAGGCCTTCTTCAATCCCATCTGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LALISRVVRVKI*LRGLLQSHLLG Trigger: TCCCAACAGATGGGATTGAAGAAGGCCTCTCAGGCAGATTTTAACTCTGACTACTCTGGAGATAAGAGCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | CACCAGATCAAAGTCTGCGACATCACTCCGCATTTGTaGGGACAAAGAACTTCCTTTTGGAACTGTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: HQIKVCDITPHL*GQRTSFWNCLA Trigger: TGCTAGACAGTTCCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGATGTCGCAGACTTTGATCTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | AGACACCAGATCAAAGTCTGCGACATCACTCCGCATTaGTTGGGACAAAGAACTTCCTTTTGGAACTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: RHQIKVCDITPH*LGQRTSFWNCL Trigger: TAGACAGTTCCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGATGTCGCAGACTTTGATCTGGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS TCA 72 bp | CTTGCATTCTTCAATTTAGCGCTGACTTTCCTAAAGTaGAGTACCGAGATAATGATGCTGGCCACAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: LAFFNLALTFLK*STEIMMLATRT Trigger: GGTTCTTGTGGCCAGCATCATTATCTCGGTACTTCACTTTAGGAAAGTCAGCGCTAAATTGAAGAATGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 90 bp | AGTCTGCGACATCACTCCGCATTTGTTGGGACAAAGAACTTCCTTTaGGAACTGTCTAGCAAGATTGTTAAAGATGTCCTTTTGATGACG | + |
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Preference number: 6 (lower is better) Translates to: SLRHHSAFVGTKNFL*ELSSKIVKDVLLMT Trigger: CGTCATCAAAAGGACATCTTTAACAATCTTGCTAGACAGTTCCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGATGTCGCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | GTTCACCATCCTCATTACATTTTTGTGAATGTCGTGTaGCAGGTGGTCATTCAGGTAAGTGTTTTCGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VHHPHYIFVNVV*QVVIQVSVFES Trigger: ACTTTCGAAAACACTTACCTGAATGACCACCTGCCACACGACATTCACAAAAATGTAATGAGGATGGTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CAA 72 bp | CATCACTCCGCATTTGTTGGGACAAAGAACTTCCTTTaGGAACTGTCTAGCAAGATTGTTAAAGATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HHSAFVGTKNFL*ELSSKIVKDVL Trigger: AAGGACATCTTTAACAATCTTGCTAGACAGTTCCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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| CDS CCA 72 bp | ATCACTCCGCATTTGTTGGGACAAAGAACTTCCTTTTaGAACTGTCTAGCAAGATTGTTAAAGATGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ITPHLLGQRTSF*NCLARLLKMSF Trigger: AAAGGACATCTTTAACAATCTTGCTAGACAGTTCCAAAAGGAAGTTCTTTGTCCCAACAAATGCGGAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033100.5 |
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