Pregenerated sensors for IVL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049128Ensembl transcript IDs: ENSMUST00000053107.6
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGGATGGCTCTCTTCCCTTATGTGGGATGGTTGGAGAGTCTCTaGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTC | + |
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Preference number: 1 (lower is better) Translates to: VWMALFPYVGWLESL*DTGVVALVLASLHF Trigger: GAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 90 bp | GGCTCTCTTCCCTTATGTGGGATGGTTGGAGAGTCTCTGGGACACTaGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GSLPLCGMVGESLGH*CGCFSFGFTALHGS Trigger: AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 90 bp | GAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCCCTTATGTGGGATaGTTGGAGAGTCTCTGGGACACTGGTGTGGTTGCTTTAGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: EDLKEVWMALFPYVG*LESLWDTGVVALVL Trigger: CAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTTAAGGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTaGATGGCTCTCTTCCCTTATGTGGGATGGTTGGAGAGTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: IDLWVSRPAEDLKEV*MALFPYVGWLESLW Trigger: CCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR-3UTR CCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCTGGTTGGAGAGTCTCTaGGACACTGGTGTGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LWVSRPAEDLKEVWMALFWLESL*DTGVVA Trigger: AGCAACCACACCAGTGTCCCAGAGACTCTCCAACCA...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CAA 90 bp | GACCTTAAGGAAGTGTGGATGGCTCTCTTCCCTTATGTGGGATGGTaGGAGAGTCTCTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DLKEVWMALFPYVGW*ESLWDTGVVALVLA Trigger: AGCCAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTTAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR-3UTR CCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCTCTCCTTTCACTGGTTaGACTGGCTTAGTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LWVSRPAEDLKEVWMALFSPFTG*TGLVSA Trigger: AGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGA...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR-3UTR GCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCGGACACTGGTGTGGTTaGTTTAGTTTTGGCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: LWVSRPAEDLKEVWMALFGHWCG*FSFGFT Trigger: AGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCC...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTTTTCACTGGTTGGACTaGCTTAGTCAGTGCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LGHWCGCFSFGFTALHGSFHWLD*LSQCLV Trigger: TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAA...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | TGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTaGATGGCTCTCTTCCCTTATGTGGGATGGTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: WVSRPAEDLKEV*MALFPYVGWLE Trigger: CTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | AAGGAAGTGTGGATGGCTCTCTTCCCTTATGTGGGATaGTTGGAGAGTCTCTGGGACACTGGTGTGGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: KEVWMALFPYVG*LESLWDTGVVA Trigger: AGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | ACCTTAAGGAAGTGTGGATGGCTCTCTTCCCTTATGTaGGATGGTTGGAGAGTCTCTGGGACACTGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TLRKCGWLSSLM*DGWRVSGTLVW Trigger: CCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGCCATCCACACTTCCTTAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | CCCTTATGTGGGATGGTTGGAGAGTCTCTGGGACACTaGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: PLCGMVGESLGH*CGCFSFGFTAL Trigger: AAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | GCTCTCTTCCCTTATGTGGGATGGTTGGAGAGTCTCTaGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: ALFPYVGWLESL*DTGVVALVLAS Trigger: TGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAGAGACTCTCCAACCATCCCACATAAGGGAAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR CCA 72 bp | CTGCTGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTaGTTGGACTGGCTTAGTCAGTGCTTGGTACTAATT | + |
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Preference number: 3 (lower is better) Translates to: LLLLCSEHVSFH*LDWLSQCLVLI Trigger: AATTAGTACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| 3UTR-3UTR CAA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGTGGTTGCTTTAGTTTaGGCTTCACTGCACTTCATG | + |
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Preference number: 3 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMVVALV*ASLHFM Trigger: CATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCAC...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACTGCTGCTGCTTCTGCTaGCCCAGGCACAGACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDCCCFC*PRHRPC Trigger: GCAGGGTCTGTGCCTGGGGCAGCAGAAGCAGCAGCA...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCAGTTCTGGCTCAGGTaGCTCCTGCTGCTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDQFWLR*LLLLLL Trigger: AAGCAGCAGCAGCAGGAGTCACCTGAGCCAGAACTG...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACTCCTGTGTCTCTTGCTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDSCVSC*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGA...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR CCA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTATGCTCCTGTGGCTCCTaGTGCCTCTGTCCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVCSCGS*CLCPRC Trigger: GCACCTGGGACAGAGGCACCAGGAGCCACAGGAGCA...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTCCCAGGCACAGACCCTaGTCCTGTGTCTCTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSPRHRP*SCVSCC Trigger: GCAGCAAGAGACACAGGAGCAGGGTCTGTGCCTGGG...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTCTTGCTGCTGCTGCTaGTGCTTCTGCTGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQSCCCC*CFCCPR Trigger: CCTGGGGCAGCAGAAGCAGCAGCAGCAGCAGCAAGA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACGGTACTAGCATGTCTTaGTGCTGCTGCTGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDGTSMS*CCCCCF Trigger: GAAGCAGCAGCAGCAGCAGCAAGACATGCTAGTACC...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGGTTCAGGTGACTCCTaGTGCTGCTTTCCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSGSGDS*CCFPRG Trigger: GCCTCTGGGAAAGCAGCAGCAGGAGTCACCTGAACC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGGCTCAGGTGACTCCTaGTGCTGCTGCTTTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSGSGDS*CCCFPR Trigger: TCTGGGAAAGCAGCAGCAGCAGGAGTCACCTGAGCC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR CCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACACCCAGATGCAGTTCTaGATCCTGCAGCTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDTQMQF*ILQLLL Trigger: CAGGAGAAGCTGCAGGATCCAGAACTGCATCTGGGT...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTCAGTTCTGGTTCAGGTaGCTCCTGCTGCTGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSQFWFR*LLLLLS Trigger: GGAAAGCAGCAGCAGGAGTCACCTGAACCAGAACTG...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACTTTTGTGGTCCTGGCTaGTGCTGGTGCTCACACTTT | + |
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Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDFCGPG*CWCSHF Trigger: AAAGTGTGAGCACCAGCAGCAGCCAGGACCACAAAA...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTTGCTCCTGTGTCTCTTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSCSCVS*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAAGAGACACAGGAGCA...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGGTGACTCCTGCTGCTaGTTTCCCAGAGGCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSGDSCC*FPRGSS Trigger: AGAACTGCCTCTGGGAAAGCAGCAGCAGGAGTCACC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGGTGACTCCTGCTGCTaGTGCTTTCCCAGAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSGDSCC*CFPRGS Trigger: ACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTCACC...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGCAGCTGCTGCTTTTGTaGTCCTGGCTGCTGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMQLLLL*SWLLLV Trigger: CACCAGCAGCAGCCAGGACCACAAAAGCAGCAGCTG...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | TGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGCTGCTGCTCATATCCGGCTCATGTaGCTGCTGCTGCTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WCGCFSFGFTALHGSAAAHIRLM*LLLLSQ Trigger: CTGGGAAAGCAGCAGCAGTCACATGAGCCGGATATG...AGCAGCAGCAGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTCAACTCTGGGTCAGGTaGCTCCTGGTACTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSQLWVR*LLVLLL Trigger: AAGCAGCAGTACCAGGAGTCACCTGACCCAGAGTTG...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCAGGTGCAGCTCCTGCTaGTTTTCTCCTGGAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: LWVSRPAEDLKEVWMALFRCSSC*FSPGIS Trigger: ACTGATTCCAGGAGAAAAGCAGCAGGAGCTGCACCT...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCCCAGGTGCAGCTCCTaGTGCTTTTCTCCTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAPRCSS*CFSPGI Trigger: GATTCCAGGAGAAAAGCAGCAGGAGCTGCACCTGGG...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTCAGGTGACTCCTGCTaGTGCTTTCCCAGAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQSGDSC*CFPRGS Trigger: ACTGCCTCTGGGAAAGCAGCAGCAGGAGTCACCTGA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGCTGCTGCTGACTCCTGCTGCTGCTaGTTTCCCAGAGGCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: WCGCFSFGFTALHGSAAADSCCC*FPRGSS Trigger: AGAACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTC...AGCAGCAGCAGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTGCTGCTTTCCCAGGTaGAGTTCTGGTTCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMCCFPR*SSGSGG Trigger: GCCACCTGAACCAGAACTGCACCTGGGAAAGCAGCA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTGGCTCATGTGACTCCTaGTGCTTTCCCAGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAGSCDS*CFPRCS Trigger: ACTGCACCTGGGAAAGCAGCAGGAGTCACATGAGCC...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR CCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGCTGCTTTTGTGGTCCTaGCTGCTGCTGGTGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQLLLWS*LLLVLT Trigger: TGTGAGCACCAGCAGCAGCCAGGACCACAAAAGCAG...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTGAGAACACACAGTCTTaGGAGGTCCCTGAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAENTQS*EVPEPQ Trigger: CTGTGGTTCAGGGACCTCTCAAGACTGTGTGTTCTC...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | TGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGCTGCTGCTGGAGTTTTCTGCTGCTaGCCCAGATGCAGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: WCGCFSFGFTALHGSAAAGVFCC*PRCSSG Trigger: TCCAGAACTGCATCTGGGTCAGCAGCAGAAAACTCC...AGCAGCAGCAGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTTCTGCTTCTCTTTCTaGTCCCCTGCCATATCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQFCFSF*SPAISG Trigger: GCCGGATATGGCAGGGGATCAGAAAGAGAAGCAGAA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR TCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCATATCTGGCTCATGTaGCTCCTGCTGCTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAHIWLM*LLLLSQ Trigger: CTGGGAAAGCAGCAGGAGTCACATGAGCCAGATATG...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGGATGTGGAGTTGGTTaGTTTGCTTGTTCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSGCGVG*FACSCW Trigger: CCAGCAGGAACAAGCAAAGCAACCAACTCCACATCC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTGCTGCTTCTCCAGATaGAGTTCCTGTTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQCCFSR*SSCSCS Trigger: GCTGCAGGAACAGGAACTGCATCTGGAGAAGCAGCA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGGCTCTTGTGGTAGCTaGTGCTTCTCCAGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSGSCGS*CFSRCS Trigger: ACTGCATCTGGAGAAGCAGCAGCTACCACAAGAGCC...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTACTGAGGTGCTGTTCTTaGATTTGTGGCTCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVLRCCS*ICGSCC Trigger: GCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAG...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGCTGCTGCTGGCTCATGTGACTGCTaGTGCTTTCCCAGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WCGCFSFGFTALHGSAAAGSCDC*CFPSCS Trigger: ACTGCAACTGGGAAAGCAGCAGCAGTCACATGAGCC...AGCAGCAGCAGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTTCCCTGAACCACAGCTaGAACAGTCACTGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSSLNHS*NSHWQC Trigger: ACACTGCCAGTGACTGTTCCAGCTGTGGTTCAGGGA...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTCCTGCAGCTTCTCCTaGTGCTGTCTCAGATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMSCSFS*CCLRCS Trigger: GCTACATCTGAGACAGCACCAGGAGAAGCTGCAGGA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTACAGTTTCTGCTCCTCTaGAGTTTTCTGCTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVQFLLL*SFLLLT Trigger: GGTCAGCAGCAGAAAACTCCAGAGGAGCAGAAACTG...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGGCTCAGATGGCTTCTaGTGCTGCTGTTTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMGSDGF*CCCFPS Trigger: ACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCC...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTTTTTCACCTGCAGCTaGTGCTTTTGTGGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQFFTCS*CFCGPG Trigger: GCCAGGACCACAAAAGCAGCAGCTGCAGGTGAAAAA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCTGTGACTTTTTCACCTaGAGCTGCTGCTTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWVSRPAEDLKEVWMALFCDFFT*SCCFCG Trigger: ACCACAAAAGCAGCAGCTGCAGGTGAAAAAGTCACA...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTTCTTGTGGTAGCTGCTaGTTCTCCAGATGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSSCGSC*FSRCSS Trigger: GGAACTGCATCTGGAGAAGCAGCAGCTACCACAAGA...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTAGGTTCATGTAGCTTCTaGTTCTGTTTCTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVGSCSF*FCFCPR Trigger: CCTGGGACAGAAACAGAAGCAGAAGCTACATGAACC...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTCAGATGGCTTCTGGTaGTGCTGTTTTCCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMSDGFW*CCFPSC Trigger: GCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGACTCCTGGTACTGCTaGTTTCTCAGGTACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSDSWYC*FLRYSS Trigger: AGAACTGTACCTGAGAAAGCAGCAGTACCAGGAGTC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGGGTGACTCCTGGTACTaGTGCTTTCTCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQGDSWY*CFLRYS Trigger: ACTGTACCTGAGAAAGCAGCAGTACCAGGAGTCACC...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTTCATGTGACTCCTGCTaGTTTCCCAGGTGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMASCDSC*FPRCSS Trigger: AGAACTGCACCTGGGAAAGCAGCAGGAGTCACATGA...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGCGCTCTATCTGTTGCTaGTGCTGCTTTCCTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMRSICC*CCFPRC Trigger: ACACCTAGGAAAGCAGCAGCAGCAACAGATAGAGCG...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTCACGCTCTATCTGTTaGTGCTGCTGCTTTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMSRSIC*CCCFPR Trigger: CCTAGGAAAGCAGCAGCAGCAACAGATAGAGCGTGA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGAGCTGGAACAGTCACTaGCAGTGTGTGTTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMSWNSH*QCVLMG Trigger: TCCCATCAACACACACTGCCAGTGACTGTTCCAGCT...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCGCTTCTCCTCATGTTTaGGAAAGCCCTTCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWVSRPAEDLKEVWMALFASPHV*ESPSLE Trigger: TTCAAGAGAAGGGCTTTCCCAAACATGAGGAGAAGC...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCAGTTCTGGCTCAGATaGCTTCTGGTGCTGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAQFWLR*LLVLLF Trigger: AAACAGCAGCACCAGAAGCCATCTGAGCCAGAACTG...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTCAGTTCTGGTTCAGGTaGCTTCTGATGCTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSQFWFR*LLMLLL Trigger: GAGAAGCAGCATCAGAAGCCACCTGAACCAGAACTG...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| 3UTR CAA 72 bp | CTGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTaGGACTGGCTTAGTCAGTGCTTGGTACTAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCSEHVSFHW*DWLSQCLVLIA Trigger: AGCAATTAGTACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR TCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTGGTGCTCACACTTTTaGTCAGGCAGATCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQWCSHF*SGRSFT Trigger: TGTGAAGGATCTGCCTGATCAAAAGTGTGAGCACCA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGATGGTCAGGGCCAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACTACAGTTCTGGCTTATaGAGTTTCTGCTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEDGQGQIDLWVSRPAEDYSSGL*SFCFSF Trigger: GAAAGAGAAGCAGAAACTTCATAAGCCAGAACTGTA...GTCCTCAGCTGGCCTACTCACCCATAAATCTATCTGGCCCTGACCATCCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTTGGAGTTGGTTGCTTTaGTTGTTCCTGCTGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSWSWLL*LFLLDM Trigger: CATATCCAGCAGGAACAAGCAAAGCAACCAACTCCA...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGTTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTGTTCCTGCAGCTCCTaGTGTGACTTTTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKVGIELLGEDTGPYSILCSCSS*CDFFTC Trigger: GCAGGTGAAAAAGTCACAGCAGGAGCTGCAGGAACA...CAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAACCTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTATTTGTGGCTCTTGCTaGTGTTGTTGTTCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSICGSC*CCCSRH Trigger: GTGCCTGGAACAACAACAGCAGCAAGAGCCACAAAT...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCCTGGAATCAGTTTCTaGTCCTCTGGAGTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAPGISF*SSGVFC Trigger: GCAGAAAACTCCAGAGGAGCAGAAACTGATTCCAGG...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTATGCTGTTTTCCCAGTTaGAGTTCTGGTTCATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVCCFPS*SSGSCS Trigger: GCTACATGAACCAGAACTGCAACTGGGAAAACAGCA...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGGCTCACCAAGTTTCTaGTTCTCTTCCAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGHWCGCFSFGFTALHGSGSPSF*FSSRSS Trigger: AGAGGATCTGGAAGAGAAGCAGAAACTTGGTGAGCC...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTCTGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCATTGTGTAGGATGTaGAGTTGGTTGCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSVVSTSPFTGWTGLVSALCRM*SWLLCL Trigger: CAAGCAAAGCAACCAACTCCACATCCTACACAATGC...ACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACAGAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTATCCTTCACAGGGTTTaGCCGCTTCTCCTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAILHRV*PLLLMF Trigger: AAACATGAGGAGAAGCGGCCAAACCCTGTGAAGGAT...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR TCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTTTTCTCTTGCTTAAGTaGCTGACCCAGGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAFLLLK*LTQAFW Trigger: CCAAAAAGCCTGGGTCAGTCACTTAAGCAAGAGAAA...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGTTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTGCATTTGTGGCTCTTaGTGCTGTTGTTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKVGIELLGEDTGPYSILCICGS*CCCCSR Trigger: CCTGGAACAACAACAGCAGCAAGAGCCACAAATGCA...CAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAACCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTGCTGCTGCTCTGCTGGATATGATCTaGAGAACACACAGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WCGCFSFGFTALHGSAAALLDMI*RTHSLE Trigger: CTCAAGACTGTGTGTTCTCCAGATCATATCCAGCAG...AGCAGCAGCAGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTGTAGGATGTGGAGTTaGTTGCTTTGCTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMCRMWS*LLCLFL Trigger: CAGGAACAAGCAAAGCAACCAACTCCACATCCTACA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGATCTCAGTGAAGACCTaGCATTGTGTAGGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMISVKT*HCVGCG Trigger: TCCACATCCTACACAATGCCAGGTCTTCACTGAGAT...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGCTGTTCTTGCATTTGTaGCTCTTGCTGCTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQLFLHL*LLLLLL Trigger: CAACAACAGCAGCAAGAGCCACAAATGCAAGAACAG...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGATCTGTTGCTGCTGCTaGTTTCCTAGGTGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMICCCC*FPRCNS Trigger: AGAATTACACCTAGGAAAGCAGCAGCAGCAACAGAT...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR GCA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTTCTATCTGTTGCTGCTaGTGCTTTCCTAGGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLWVSRPAEDLKEVWMASICCC*CFPRCN Trigger: ATTACACCTAGGAAAGCAGCAGCAGCAACAGATAGA...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CCA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGTCTCAGGTACAGTTCTaGCTTATGAAGTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFLGKIPDHIASCIQSQVQF*LMKFLL Trigger: AAGCAGAAACTTCATAAGCCAGAACTGTACCTGAGA...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTCCTGTGTCTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCVSCCCCCCCCCC*CCCCCCCCLRCCSC Trigger: GCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCLRCCSCICGSC Trigger: GCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCCCCCCCCCCCCCC*CCCCLRCCSCICGS Trigger: AGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TCCTGTGTCTCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SCVSCCCCCCCCCCC*CCCCCCCLRCCSCI Trigger: AATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | GGTTCATGTAGCTTCTGCTTCTGTTTCTGTCCCAGGTGTAGCTCCTaGTCCTGTGGCTCCTGGTGCCTCTGTCCCAGGTGCAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSCSFCFCFCPRCSS*SCGSWCLCPRCSSC Trigger: GCAGGAGCTGCACCTGGGACAGAGGCACCAGGAGCCACAGGAGCAGGAGCTACACCTGGGACAGAAACAGAAGCAGAAGCTACATGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTaGCTCTTGCTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLSEVLFLHL*LLLLLLFQAQEPLG Trigger: CCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | CTCAGATGTAGCTCCTGTGGTACTAGCATGTCTTGCTGCTGCTGCTaGTGCTTCTGCTGCCCCAGGCACAGACCCTGCTCCTGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRCSSCGTSMSCCCC*CFCCPRHRPCSCVS Trigger: AGAGACACAGGAGCAGGGTCTGTGCCTGGGGCAGCAGAAGCAGCAGCAGCAGCAGCAAGACATGCTAGTACCACAGGAGCTACATCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGTCTCAGATGTAGCTCCTGTGGTACTAGCATGTCTTGCTGCTGCTaGTGCTGCTTCTGCTGCCCCAGGCACAGACCCTGCTCCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRCSSCGTSMSCCC*CCFCCPRHRPCSCV Trigger: GACACAGGAGCAGGGTCTGTGCCTGGGGCAGCAGAAGCAGCAGCAGCAGCAGCAAGACATGCTAGTACCACAGGAGCTACATCTGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTTTCCCAGTTGCAGTTCTGGCTCAGGTGACTCCTGCTGCTGCTaGTTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CFPSCSSGSGDSCCC*FPRGSSGSGDSCCC Trigger: GCAGCAGCAGGAGTCACCTGAACCAGAACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTCACCTGAGCCAGAACTGCAACTGGGAAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTGCTGCTTTCCCAGTTGCAGTTCTGGCTCAGGTGACTCCTGCTaGTGCTGCTTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCCFPSCSSGSGDSC*CCFPRGSSGSGDSC Trigger: GCAGGAGTCACCTGAACCAGAACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTCACCTGAGCCAGAACTGCAACTGGGAAAGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | GACTGCTGCTGCTTTCCCAGTTGCAGTTCTGGCTCAGGTGACTCCTaGTGCTGCTGCTTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCCCFPSCSSGSGDS*CCCFPRGSSGSGDS Trigger: GGAGTCACCTGAACCAGAACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTCACCTGAGCCAGAACTGCAACTGGGAAAGCAGCAGCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTTGCTaGTGTTGTTGTTCCAGGCACAGGAGCCCCTGGGGCTCTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCLRCCSCICGSC*CCCSRHRSPWGSCG Trigger: ACCACAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTTaGTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTGGGGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCLRCCSCICGS*CCCCSRHRSPWGSC Trigger: ACAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTaGATTTGTGGCTCTTGCTGCTGTTGTTGTTCCAGGCACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCLRCCS*ICGSCCCCCSRHRS Trigger: GCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TGCTCCTGTGGCTCCTGGTGCCTCTGTCCCAGGTGCAGCTCCTGCTaGTTTTCTCCTGGAATCAGTTTCTGCTCCTCTGGAGTTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCGSWCLCPRCSSC*FSPGISFCSSGVFC Trigger: GCAGAAAACTCCAGAGGAGCAGAAACTGATTCCAGGAGAAAAGCAGCAGGAGCTGCACCTGGGACAGAGGCACCAGGAGCCACAGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | TCCTGCTCCTGTGGCTCCTGGTGCCTCTGTCCCAGGTGCAGCTCCTaGTGCTTTTCTCCTGGAATCAGTTTCTGCTCCTCTGGAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSCGSWCLCPRCSS*CFSPGISFCSSGVF Trigger: GAAAACTCCAGAGGAGCAGAAACTGATTCCAGGAGAAAAGCAGCAGGAGCTGCACCTGGGACAGAGGCACCAGGAGCCACAGGAGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | ATTTGTGGCTCTTGCTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTaGGGCTCTTGTGGTAGCTGCTGCTTCTCCAGATGCAGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICGSCCCCCSRHRSP*GSCGSCCFSRCSSC Trigger: ACAGGAACTGCATCTGGAGAAGCAGCAGCTACCACAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS TCA 90 bp | ACACTCCTGGTGCTGCTGTTTTCCCAGGGACAACTCTGGGTCAGGTaGCTCCTGGTACTGCTGCTTTCTCAGGTACAGTTCTGGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: TLLVLLFSQGQLWVR*LLVLLLSQVQFWLM Trigger: CATAAGCCAGAACTGTACCTGAGAAAGCAGCAGTACCAGGAGTCACCTGACCCAGAGTTGTCCCTGGGAAAACAGCAGCACCAGGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | TCCTGCTGCTGCTTTCCCAGAGGCAGTTCTGGCTCAGATGGCTTCTaGTGCTGCTGTTTTCCCAGTTGCAGTTCTGGTTCATGTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCCCFPRGSSGSDGF*CCCFPSCSSGSCSF Trigger: GAAGCTACATGAACCAGAACTGCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCCAGAACTGCCTCTGGGAAAGCAGCAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTGCTCCTGTGTCTCTaGCTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IDLWVSRPAEDLKEVWMALLLCL*LLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAAGAGACACAGGAGCAG...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 90 bp | GGCAGTTCTGGCTCAGATGGCTTCTGGTGCTGCTGTTTTCCCAGTTaGAGTTCTGGTTCATGTAGCTTCTGCTTCTGTTTCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSGSDGFWCCCFPS*SSGSCSFCFCFCPR Trigger: CCTGGGACAGAAACAGAAGCAGAAGCTACATGAACCAGAACTGCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCCAGAACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | TGGTTCAGGTGGCTTCTGATGCTGCTTCTCTTCCAATTGCAGTTCTaGTTCCTGACACTCCTGGTGCTGCTGTTTTCCCAGGGACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: WFRWLLMLLLFQLQF*FLTLLVLLFSQGQL Trigger: GAGTTGTCCCTGGGAAAACAGCAGCACCAGGAGTGTCAGGAACCAGAACTGCAATTGGAAGAGAAGCAGCATCAGAAGCCACCTGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTCTCTTGCTGCTGTTGTaGTTCCAGGCACAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGHWCGCFSFGFTALHGSLLLLL*FQAQEP Trigger: GGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAG...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS TCA 90 bp | TTTTCTCCTGGAATCAGTTTCTGCTCCTCTGGAGTTTTCTGCTGCTaGCCCAGATGCAGTTCTGGATCCTGCAGCTTCTCCTGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSPGISFCSSGVFCC*PRCSSGSCSFSWCC Trigger: ACAGCACCAGGAGAAGCTGCAGGATCCAGAACTGCATCTGGGTCAGCAGCAGAAAACTCCAGAGGAGCAGAAACTGATTCCAGGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS TCA 90 bp | AAGTTTCTGCTTCTCTTCCAGATCCTCTGCCATATCTGGCTCATGTaGCTCCTGCTGCTTTCCCAGGTGCAGTTCTGGTTCAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KFLLLFQILCHIWLM*LLLLSQVQFWFRWL Trigger: AAGCCACCTGAACCAGAACTGCACCTGGGAAAGCAGCAGGAGTCACATGAGCCAGATATGGCAGAGGATCTGGAAGAGAAGCAGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | CTGCTGGTGCTCACACTTTTGATCAGGCAGATCCTTCACAGGGTTTaGCCGCTTCTCCTCATGTTTGGGAAAGCCCTTCTCTTGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLTLLIRQILHRV*PLLLMFGKALLLNL Trigger: GAGATTCAAGAGAAGGGCTTTCCCAAACATGAGGAGAAGCGGCCAAACCCTGTGAAGGATCTGCCTGATCAAAAGTGTGAGCACCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCGGGAAAGCCCTTCTCTaGAATCTCAGTGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWVSRPAEDLKEVWMALFGKALL*NLSEDL Trigger: CAGGTCTTCACTGAGATTCAAGAGAAGGGCTTTCCC...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | CAGATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGTGGCTCTTGCTGCTGTaGTTGTTCCAGGCACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QIDLWVSRPAEDLKEVWMWLLLL*LFQAQE Trigger: CTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCA...CATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS TCA 90 bp | ACAGGGTTTGGCCGCTTCTCCTCATGTTTGGGAAAGCCCTTCTCTTaGATCTCAGTGAAGACCTGGCATTGTGTAGGATGTGGAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGFGRFSSCLGKPFS*ISVKTWHCVGCGVG Trigger: ACCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAAGAGAAGGGCTTTCCCAAACATGAGGAGAAGCGGCCAAACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | AGGATGTGGAGTTGGTTGCTTTGCTTGTTCCTGCTGGATATGATCTaGAGAACACACAGTCTTGAGAGGTCCCTGAACCACAGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RMWSWLLCLFLLDMI*RTHSLERSLNHSWN Trigger: GTTCCAGCTGTGGTTCAGGGACCTCTCAAGACTGTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGAGCACGTCTCCTTTCACTGGTTGGACTGGCTTAGTCAGTGCTTGGTAAGTGAAGACCTGGCATaGTGTAGGATGTGGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSEHVSFHWLDWLSQCLVSEDLA*CRMWSW Trigger: CCAACTCCACATCCTACACAATGCCAGGTCTTCACT...TACCAAGCACTGACTAAGCCAGTCCAACCAGTGAAAGGAGACGTGCTCACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | TTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTCTCTTCCTGCTTCTCTTCCAATaGCAGTTCTGGTTCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LWVSRPAEDLKEVWMALFLLLFQ*QFWFLT Trigger: TGTCAGGAACCAGAACTGCAATTGGAAGAGAAGCAG...GAAGAGAGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | TTTAAGGTTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGGATCCTTCACAGGGTTaGGCCGCTTCTCCTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FKVGIELLGEDTGPYSILDPSQG*AASPHV Trigger: AACATGAGGAGAAGCGGCCAAACCCTGTGAAGGATC...CAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAACCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | CTGGGACACTGGTGTGGTTGCTTTAGTTTTGGCTTCACTGCACTTCATGGTTCTCTGGTGCTCACACTTTaGATCAGGCAGATCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGHWCGCFSFGFTALHGSLVLTL*IRQILH Trigger: GTGAAGGATCTGCCTGATCAAAAGTGTGAGCACCAG...AGAACCATGAAGTGCAGTGAAGCCAAAACTAAAGCAACCACACCAGTGTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTGTGCTGTTCTTGCATTaGTGGCTCTTGCTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IDLWVSRPAEDLKEVWMAVLFLH*WLLLLL Trigger: CAACAGCAGCAAGAGCCACAAATGCAAGAACAGCAC...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | GCCCTTCTCTTGAATCTCAGTGAAGACCTGGCATTGTGTAGGATGTaGAGTTGGTTGCTTTGCTTGTTCCTGCTGGATATGATCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLLNLSEDLALCRM*SWLLCLFLLDMIWR Trigger: TCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAAGAGAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 90 bp | CTCTTGAATCTCAGTGAAGACCTGGCATTGTGTAGGATGTGGAGTTaGTTGCTTTGCTTGTTCCTGCTGGATATGATCTGGAGAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLNLSEDLALCRMWS*LLCLFLLDMIWRTH Trigger: GTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATGGGTGAGTAGGCCAGCTGAGGACCTTAAGGAAGTGTGGATGGCTAGTTGGTTGCTTTGCTaGTTCCTGCTGGATATGATC | + |
|
Preference number: 5 (lower is better) Translates to: IDLWVSRPAEDLKEVWMASWLLC*FLLDMI Trigger: GATCATATCCAGCAGGAACAAGCAAAGCAACCAACT...AGCCATCCACACTTCCTTAAGGTCCTCAGCTGGCCTACTCACCCATAAATCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS-3UTR CAA 90 bp | TTGGGATTGAGCTTCTTGGGGAAGATACCGGACCATATAGCATCCTGTATCCAGCAGGCTTTTTGGTCCTaGATAACCTTCACGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGLSFLGKIPDHIASCIQQAFWS*ITFTLY Trigger: ATAGAGCGTGAAGGTTATCAAGGACCAAAAAGCCTG...CTGGATACAGGATGCTATATGGTCCGGTATCTTCCCCAAGAAGCTCAATCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TGCCCCAGGCACAGACCCTGCTCCTGTGTCTCTTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CPRHRPCSCVSC*CCCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGAGCAGGGTCTGTGCCTGGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TCCTGTGTCTCTTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCVSCCCCCCCC*CCCCCCCCCCL Trigger: CAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TGCTCCTGTGTCTCTTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSCVSCCCCCCC*CCCCCCCCCCC Trigger: ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACACAGGAGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TCCAGGCACAGGAGCCCCTGGGGCTCTTGTGGTAGCTaGTGCTTCTCCAGATGCAGTTCCTGTTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRHRSPWGSCGS*CFSRCSSCSCS Trigger: GCTGCAGGAACAGGAACTGCATCTGGAGAAGCAGCAGCTACCACAAGAGCCCCAGGGGCTCCTGTGCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | GGTACTAGCATGTCTTGCTGCTGCTGCTGCTGCTTCTaGTGCCCCAGGCACAGACCCTGCTCCTGTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GTSMSCCCCCCF*CPRHRPCSCVS Trigger: AGAGACACAGGAGCAGGGTCTGTGCCTGGGGCAGCAGAAGCAGCAGCAGCAGCAGCAAGACATGCTAGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | AGCTTCTGCTTCTGTTTCTGTCCCAGGTGTAGCTCCTaGTCCTGTGGCTCCTGGTGCCTCTGTCCCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFCFCFCPRCSS*SCGSWCLCPRC Trigger: GCACCTGGGACAGAGGCACCAGGAGCCACAGGAGCAGGAGCTACACCTGGGACAGAAACAGAAGCAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CAA 90 bp | CTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTaGCTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTGGGGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLSEVLFLHLWL*LLLLFQAQEPLGLL Trigger: CAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS TCA 72 bp | GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTaGGGTGCTGTTCTTGCATTTGTGGCTCTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAAAAAAAV*GAVLAFVALAA Trigger: AGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CCA 72 bp | TCTTGCTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTaGGGCTCTTGTGGTAGCTGCTGCTTCTCCAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SCCCCCSRHRSP*GSCGSCCFSRC Trigger: GCATCTGGAGAAGCAGCAGCTACCACAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CAA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTGAGGTGCTGTTCTaGCATTTGTGGCTCTTGCTGCTGTTGTTGTTCCAGGCACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLLLSEVLF*HLWLLLLLLFQAQE Trigger: CTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTTGCTaGTGTTGTTGTTCCAGGCACAGGAGCCCCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLRCCSCICGSC*CCCSRHRSPWG Trigger: GCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TGTGGCTCCTGGTGCCTCTGTCCCAGGTGCAGCTCCTaGTGCTTTTCTCCTGGAATCAGTTTCTGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CGSWCLCPRCSS*CFSPGISFCSS Trigger: AGAGGAGCAGAAACTGATTCCAGGAGAAAAGCAGCAGGAGCTGCACCTGGGACAGAGGCACCAGGAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCCTGCTaGTGCTTTCCCAGAGGCAGTTCTGGCTCAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPRGSSGSGDSC*CFPRGSSGSDG Trigger: GCCATCTGAGCCAGAACTGCCTCTGGGAAAGCAGCAGCAGGAGTCACCTGAACCAGAACTGCCTCTGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | AGTTGCAGTTCTGGCTCAGGTGACTCCTGCTGCTGCTaGTTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSSGSGDSCCC*FPRGSSGSGDS Trigger: GGAGTCACCTGAACCAGAACTGCCTCTGGGAAAGCAGCAGCAGCAGGAGTCACCTGAGCCAGAACTGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS CAA 72 bp | GAGGTGCTGTTCTTGCATTTGTGGCTCTTGCTGCTGTaGTTGTTCCAGGCACAGGAGCCCCTGGGGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EVLFLHLWLLLL*LFQAQEPLGLL Trigger: CAAGAGCCCCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
||
| CDS GCA 72 bp | TGCTGTCTGAGGTGCTGTTCTTGCATTTGTGGCTCTTaGTGCTGTTGTTGTTCCAGGCACAGGAGCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CCLRCCSCICGS*CCCCSRHRSPW Trigger: CCAGGGGCTCCTGTGCCTGGAACAACAACAGCAGCAAGAGCCACAAATGCAAGAACAGCACCTCAGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS GCA 72 bp | TGCTTTCCCAGAGGCAGTTCTGGTTCAGGTGACTCCTaGTGCTGCTTTCCCAGAGGCAGTTCTGGCTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: CFPRGSSGSGDS*CCFPRGSSGSD Trigger: ATCTGAGCCAGAACTGCCTCTGGGAAAGCAGCAGCAGGAGTCACCTGAACCAGAACTGCCTCTGGGAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | CTGCTGCTGCTTTCCCAGAGGCAGTTCTGGCTCAGATaGCTTCTGGTGCTGCTGTTTTCCCAGTTGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLLSQRQFWLR*LLVLLFSQLQF Trigger: GAACTGCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCCAGAACTGCCTCTGGGAAAGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | TTTTGTGGTCCTGGCTGCTGCTGGTGCTCACACTTTTaGTCAGGCAGATCCTTCACAGGGTTTGGCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FCGPGCCWCSHF*SGRSFTGFGRF Trigger: GAAGCGGCCAAACCCTGTGAAGGATCTGCCTGATCAAAAGTGTGAGCACCAGCAGCAGCCAGGACCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | CTTCTCTTTCTGATCCCCTGCCATATCCGGCTCATGTaGCTGCTGCTGCTTTCCCAGTTGCAGTTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLFLIPCHIRLM*LLLLSQLQFWL Trigger: GAGCCAGAACTGCAACTGGGAAAGCAGCAGCAGTCACATGAGCCGGATATGGCAGGGGATCAGAAAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | GTGCTGCTGTTTTCCCAGGGACAACTCTGGGTCAGGTaGCTCCTGGTACTGCTGCTTTCTCAGGTACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VLLFSQGQLWVR*LLVLLLSQVQF Trigger: GAACTGTACCTGAGAAAGCAGCAGTACCAGGAGTCACCTGACCCAGAGTTGTCCCTGGGAAAACAGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS GCA 72 bp | AGATCCTCTGCCATATCTGGCTCATGTGACTCCTGCTaGTTTCCCAGGTGCAGTTCTGGTTCAGGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSSAISGSCDSC*FPRCSSGSGGF Trigger: GAAGCCACCTGAACCAGAACTGCACCTGGGAAAGCAGCAGGAGTCACATGAGCCAGATATGGCAGAGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 72 bp | CTTTTGTGGTCCTGGCTGCTGCTGGTGCTCACACTTTaGATCAGGCAGATCCTTCACAGGGTTTGGCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLWSWLLLVLTL*IRQILHRVWPL Trigger: AAGCGGCCAAACCCTGTGAAGGATCTGCCTGATCAAAAGTGTGAGCACCAGCAGCAGCCAGGACCACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | GGAATCAGTTTCTGCTCCTCTGGAGTTTTCTGCTGCTaGCCCAGATGCAGTTCTGGATCCTGCAGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GISFCSSGVFCC*PRCSSGSCSFS Trigger: GGAGAAGCTGCAGGATCCAGAACTGCATCTGGGTCAGCAGCAGAAAACTCCAGAGGAGCAGAAACTGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | CTCCTGCTGCTTTCCCAGGTGCAGTTCTGGTTCAGGTaGCTTCTGATGCTGCTTCTCTTCCAATTGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLLSQVQFWFR*LLMLLLFQLQF Trigger: GAACTGCAATTGGAAGAGAAGCAGCATCAGAAGCCACCTGAACCAGAACTGCACCTGGGAAAGCAGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 90 bp | GTGCAGTTCTGGTTCAGGTGGCTTCTGATGCTGCTTCTCTTCCAATaGCAGTTCTGGTTCCTGACACTCCTGGTGCTGCTGTTTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VQFWFRWLLMLLLFQ*QFWFLTLLVLLFSQ Trigger: CTGGGAAAACAGCAGCACCAGGAGTGTCAGGAACCAGAACTGCAATTGGAAGAGAAGCAGCATCAGAAGCCACCTGAACCAGAACTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 90 bp | CACAGGGTTTGGCCGCTTCTCCTCATGTTTGGGAAAGCCCTTCTCTaGAATCTCAGTGAAGACCTGGCATTGTGTAGGATGTGGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HRVWPLLLMFGKALL*NLSEDLALCRMWSW Trigger: CCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAAGAGAAGGGCTTTCCCAAACATGAGGAGAAGCGGCCAAACCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | GTTCCTGCTGGATATGATCTGGAGAACACACAGTCTTaGGAGGTCCCTGAACCACAGCTGGAACAGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: VPAGYDLENTQS*EVPEPQLEQSL Trigger: CAGTGACTGTTCCAGCTGTGGTTCAGGGACCTCTCAAGACTGTGTGTTCTCCAGATCATATCCAGCAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS TCA 72 bp | TGCTTTCCCAGGTGCAGTTCTGGTTCAGGTGGCTTCTaGTGCTGCTTCTCTTCCAATTGCAGTTCTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CFPRCSSGSGGF*CCFSSNCSSGS Trigger: GGAACCAGAACTGCAATTGGAAGAGAAGCAGCATCAGAAGCCACCTGAACCAGAACTGCACCTGGGAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS GCA 72 bp | TTTCCCAGAGGCAGTTCTGGCTCAGATGGCTTCTGGTaGTGCTGTTTTCCCAGTTGCAGTTCTGGTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: FPRGSSGSDGFW*CCFPSCSSGSC Trigger: ACATGAACCAGAACTGCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCCAGAACTGCCTCTGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | AGAACACACAGTCTTGAGAGGTCCCTGAACCACAGCTaGAACAGTCACTGGCAGTGTGTGTTGATGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: RTHSLERSLNHS*NSHWQCVLMGH Trigger: ATGTCCCATCAACACACACTGCCAGTGACTGTTCCAGCTGTGGTTCAGGGACCTCTCAAGACTGTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | CTCACACTTTTGATCAGGCAGATCCTTCACAGGGTTTaGCCGCTTCTCCTCATGTTTGGGAAAGCCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LTLLIRQILHRV*PLLLMFGKALL Trigger: GAGAAGGGCTTTCCCAAACATGAGGAGAAGCGGCCAAACCCTGTGAAGGATCTGCCTGATCAAAAGTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | TGGCTTCTGATGCTGCTTCTCTTCCAATTGCAGTTCTaGTTCCTGACACTCCTGGTGCTGCTGTTTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WLLMLLLFQLQF*FLTLLVLLFSQ Trigger: CTGGGAAAACAGCAGCACCAGGAGTGTCAGGAACCAGAACTGCAATTGGAAGAGAAGCAGCATCAGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 72 bp | GCTCACACTTTTGATCAGGCAGATCCTTCACAGGGTTaGGCCGCTTCTCCTCATGTTTGGGAAAGCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AHTFDQADPSQG*AASPHVWESPS Trigger: AGAAGGGCTTTCCCAAACATGAGGAGAAGCGGCCAAACCCTGTGAAGGATCTGCCTGATCAAAAGTGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS GCA 72 bp | GGCTCAGATGGCTTCTGGTGCTGCTGTTTTCCCAGTTaGAGTTCTGGTTCATGTAGCTTCTGCTTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSDGFWCCCFPS*SSGSCSFCFCF Trigger: GAAACAGAAGCAGAAGCTACATGAACCAGAACTGCAACTGGGAAAACAGCAGCACCAGAAGCCATCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CCA 72 bp | AGTTGGTTGCTTTGCTTGTTCCTGCTGGATATGATCTaGAGAACACACAGTCTTGAGAGGTCCCTGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: SWLLCLFLLDMI*RTHSLERSLNH Trigger: GTGGTTCAGGGACCTCTCAAGACTGTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 90 bp | AGTGAAGACCTGGCATTGTGTAGGATGTGGAGTTGGTTGCTTTGCTaGTTCCTGCTGGATATGATCTGGAGAACACACAGTCTTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SEDLALCRMWSWLLC*FLLDMIWRTHSLER Trigger: CCTCTCAAGACTGTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAGGTCTTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 72 bp | CTGGCATTGTGTAGGATGTGGAGTTGGTTGCTTTGCTaGTTCCTGCTGGATATGATCTGGAGAACACACAGT | + |
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Preference number: 6 (lower is better) Translates to: LALCRMWSWLLC*FLLDMIWRTHS Trigger: ACTGTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 90 bp | TTGAATCTCAGTGAAGACCTGGCATTGTGTAGGATGTGGAGTTGGTaGCTTTGCTTGTTCCTGCTGGATATGATCTGGAGAACACACAGT | + |
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Preference number: 6 (lower is better) Translates to: LNLSEDLALCRMWSW*LCLFLLDMIWRTHS Trigger: ACTGTGTGTTCTCCAGATCATATCCAGCAGGAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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| CDS CAA 72 bp | AAAGCCCTTCTCTTGAATCTCAGTGAAGACCTGGCATaGTGTAGGATGTGGAGTTGGTTGCTTTGCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KALLLNLSEDLA*CRMWSWLLCLF Trigger: GAACAAGCAAAGCAACCAACTCCACATCCTACACAATGCCAGGTCTTCACTGAGATTCAAGAGAAGGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053107.6 |
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