Pregenerated sensors for IVD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027332Ensembl transcript IDs: ENSMUST00000028807.6
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCAGCAGAGCTTCCTTAGACAGGTCAGAGGGCTGCCACATCTCTaGTTCCAAAGAAAGGCCTCTCGGTGCTGGGACCAGGGGGCGATG | + |
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Preference number: 1 (lower is better) Translates to: EQQSFLRQVRGLPHL*FQRKASRCWDQGAM Trigger: CATCGCCCCCTGGTCCCAGCACCGAGAGGCCTTTCTTTGGAAGCAGAGATGTGGCAGCCCTCTGACCTGTCTAAGGAAGCTCTGCTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 90 bp | CCACAGGACCTGTGTCTGCTGGCCAGTCAGCTGCAGAAGGTCACATaGGCAGGCCCAGTGCTAGCCTGTGACAGAGTGATGCAGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: PQDLCLLASQLQKVT*AGPVLACDRVMQTD Trigger: GTCTGTCTGCATCACTCTGTCACAGGCTAGCACTGGGCCTGCTCATGTGACCTTCTGCAGCTGACTGGCCAGCAGACACAGGTCCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 90 bp | GAAGGGCAGCTGAGCAGCAGAGCTTCCTTAGACAGGTCAGAGGGCTaGCACATCTCTGCTTCCAAAGAAAGGCCTCTCGGTGCTGGGACC | + |
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Preference number: 1 (lower is better) Translates to: EGQLSSRASLDRSEG*HISASKERPLGAGT Trigger: GGTCCCAGCACCGAGAGGCCTTTCTTTGGAAGCAGAGATGTGGCAGCCCTCTGACCTGTCTAAGGAAGCTCTGCTGCTCAGCTGCCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 90 bp | ATGCCTCTGTTACCCTTGAACAGAAAGGGCACCCTGCCAGAGGCTTaGCCAAGAAAAGGAGTCGGGTACCTGTCAGATGCTACCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MPLLPLNRKGTLPEA*PRKGVGYLSDATWR Trigger: CCTCCAGGTAGCATCTGACAGGTACCCGACTCCTTTTCTTGGGCAAGCCTCTGGCAGGGTGCCCTTTCTGTTCAAGGGTAACAGAGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | CTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCTaGCTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATT | + |
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Preference number: 1 (lower is better) Translates to: LSIPHMGSWTPTQVV*LGDNLAGVQVLCLI Trigger: AATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | CTTATGGAGGTCAGAGGGCAACTCTCCATCCCCCATATGGGTTCTTaGACTCCAACCCAGGTTGTCTGGCTTGGTGACAATCTTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LMEVRGQLSIPHMGS*TPTQVVWLGDNLAG Trigger: GCCTGCAAGATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCTGACCTCCATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 90 bp | CCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCTGGCTTGGTaGCAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCAT | + |
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Preference number: 1 (lower is better) Translates to: PPYGFLDSNPGCLAW*QSCRRAGPLPHFDH Trigger: ATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | CAGCTGGTCAGTGTATCTACTGCATTCATGAACCCCCTCTTAAGATaGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: QLVSVSTAFMNPLLR*DGCGVAKVLTPPVS Trigger: TGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCTTAAGAGGGGGTTCATGAATGCAGTAGATACACTGACCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | TCTGATAACTTATGGAGGTCAGAGGGCAACTCTCCATCCCCCATATaGGTTCTTGGACTCCAACCCAGGTTGTCTGGCTTGGTGACAATC | + |
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Preference number: 1 (lower is better) Translates to: SDNLWRSEGNSPSPI*VLGLQPRLSGLVTI Trigger: GATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCTGACCTCCATAAGTTATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | AACTTCTGGGGCACACTCTCGTTGGTAGGGTTCCTATGGCATGACTaGGTGACATGTTGCCTTCTGATAACTTATGGAGGTCAGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: NFWGTLSLVGFLWHD*VTCCLLITYGGQRA Trigger: TGCCCTCTGACCTCCATAAGTTATCAGAAGGCAACATGTCACCCAGTCATGCCATAGGAACCCTACCAACGAGAGTGTGCCCCAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | CCTGTCTCAGACCTCAGCACTCCACCTAGGCTAAGACTGTTGGGCTaGGAGCCAGGAAAAACAGTCTTTATTTTTGGGAACTCACATGAA | + |
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Preference number: 1 (lower is better) Translates to: PVSDLSTPPRLRLLG*EPGKTVFIFGNSHE Trigger: TTCATGTGAGTTCCCAAAAATAAAGACTGTTTTTCCTGGCTCCCAGCCCAACAGTCTTAGCCTAGGTGGAGTGCTGAGGTCTGAGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 90 bp | AATTTCACACACAACAAGAAGAAAAGTCACCAGGAGATCTGGGTCTaGGACTTCCTATTCTGGCCTCCTATCCCATTCCCAAAGGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: NFTHNKKKSHQEIWV*DFLFWPPIPFPKGK Trigger: TTTGCCCTTTGGGAATGGGATAGGAGGCCAGAATAGGAAGTCTCAGACCCAGATCTCCTGGTGACTTTTCTTCTTGTTGTGTGTGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 90 bp | TGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTACCTTaGAGTATATTTAATACAAAATGGCAACAGACATTGTGCAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: CFSCRTRLWAQKGLP*SIFNTKWQQTLCSC Trigger: ACAACTGCACAATGTCTGTTGCCATTTTGTATTAAATATACTGCAAGGTAAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 90 bp | CTTTGGGCGCAGAAGGGTTTACCTTGCAGTATATTTAATACAAAATaGCAACAGACATTGTGCAGTTGTAATAAAATTAGCCACAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LWAQKGLPCSIFNTK*QQTLCSCNKISHRV Trigger: CACCCTGTGGCTAATTTTATTACAACTGCACAATGTCTGTTGCCATTTTGTATTAAATATACTGCAAGGTAAACCCTTCTGCGCCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR TCA 90 bp | AGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAACACGGGGCAGAGGGCTaGCAGAGAAGGGCAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RTIASGLFLLQNTALGAEHGAEG*QRRAAE Trigger: CTCAGCTGCCCTTCTCTGTCAGCCCTCTGCCCCGTG...TTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CAA 90 bp | GGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTaGTCTGGCTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GNSPSPIWVLGLQPR*SGLVTILQACRSSA Trigger: GGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATCTACTGAGAAAGGCCTCTCGGTaGTGGGACCAGGGGGCGATG | + |
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Preference number: 2 (lower is better) Translates to: AQGVACNPSTQEIGADLLRKASR*WDQGAM Trigger: CATCGCCCCCTGGTCCCAGCACCGAGAGGCCTTTCT...CAGTAGATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCGTGGCTTGTTTCTCCTaGAGAACACGGCTTTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLVACFS*RTRLWA Trigger: CGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCAC...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGAGACTTCCTATTCTGGCCTCCTATCCCATTCCCAAAGGGCAAACTGAAGGGAGCCAGGCAACCTaGGCTGGGCCACAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: GLRLPILASYPIPKGQTEGSQAT*AGPQDL Trigger: CAGGTCCTGTGGCCCAGCCCAGGTTGCCTGGCTCCC...TTCAGTTTGCCCTTTGGGAATGGGATAGGAGGCCAGAATAGGAAGTCTCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGACAGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCAGGACCTGTGTCTGCTaGCCAGTCAGCTGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ADRTIASGLFLLQNTALGRTCVC*PVSCRR Trigger: CCTTCTGCAGCTGACTGGCCAGCAGACACAGGTCCT...GCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCTGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTCTGCAGAAGGTCACATaGGCAGGCCCAGTGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: IASGLFLLQNTALGAEGFLQKVT*AGPVLA Trigger: GGCTAGCACTGGGCCTGCTCATGTGACCTTCTGCAG...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATCTACTGCACAGGACCTGTGTCTaGTGGCCAGTCAGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AQGVACNPSTQEIGADLLHRTCV*WPVSCR Trigger: TCTGCAGCTGACTGGCCAGCAGACACAGGTCCTGTG...CAGTAGATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTCAGAGGCAACAAGGCTaGAGGGGAGCCAGGCAACCT | + |
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Preference number: 2 (lower is better) Translates to: IASGLFLLQNTALGAEGFQRQQG*RGARQP Trigger: AGGTTGCCTGGCTCCCCTCCAGCCTTGTTGCCTCTG...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | AGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAATGCTGGCCAGTCAGCTaGAGAAGGTCACATGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RTIASGLFLLQNTALGAECWPVS*RRSHEQ Trigger: CTGCTCATGTGACCTTCTGCAGCTGACTGGCCAGCA...TTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | AGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGCTGCCACATCTCTaGTTCCAAAGAAAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RTIASGLFLLQNTALGAEGLPHL*FQRKAS Trigger: AGAGGCCTTTCTTTGGAAGCAGAGATGTGGCAGCCC...TTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | AGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGACAGGTCAGAGGGCTaGCACATCTCTGCTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RTIASGLFLLQNTALGAEDRSEG*HISASK Trigger: TTTGGAAGCAGAGATGTGGCAGCCCTCTGACCTGTC...TTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | GAAAAAGCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATACCCTGCCAGAGGCTTaGCCAAGAAAAGGAGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: EKAQGVACNPSTQEIGADTLPEA*PRKGVG Trigger: CCCGACTCCTTTTCTTGGGCAAGCCTCTGGCAGGGT...ATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CAA 90 bp | TGGCTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTaGATCATCTTCTGTGGGTTGTTCCAGGGATCTTCCTCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: WLGDNLAGVQVLCLI*IIFCGLFQGSSSAG Trigger: ACCAGCTGAGGAAGATCCCTGGAACAACCCACAGAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR TCA 90 bp | GACATGTTGCCTTCTGATAACTTATGGAGGTCAGAGGGCAACTCTCCATCCCCCCAGGAGATCTGGGTCTaGGACTTCCTATTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DMLPSDNLWRSEGNSPSPQEIWV*DFLFWP Trigger: AGGCCAGAATAGGAAGTCTCAGACCCAGATCTCCTG...GGGGGATGGAGAGTTGCCCTCTGACCTCCATAAGTTATCAGAAGGCAACATGTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCATCTTCCAACCTTGCAGAGTTTaGGCTGGGTGTGGTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LGDNLAGVQVLCLILIIFQPCRV*AGCGGC Trigger: GCAACCACCACACCCAGCTCAAACTCTGCAAGGTTG...GAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTTGTCCTTCCTGGGTCTaGCATAGGCATTCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: IASGLFLLQNTALGAEGFCPSWV*HRHSGA Trigger: AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACA...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CAA 90 bp | GCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCATCTTCTGTGGGTaGTTCCAGGGATCTTCCTCAGCTGGTCAGTGTATCTACTGCATT | + |
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Preference number: 2 (lower is better) Translates to: AGVQVLCLILIIFCG*FQGSSSAGQCIYCI Trigger: AATGCAGTAGATACACTGACCAGCTGAGGAAGATCCCTGGAACAACCCACAGAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CAA 90 bp | ACTCCACCTGTCTCAGACCTCAGCACTCCACCTAGGCTAAGACTGTaGGGCTGGGAGCCAGGAAAAACAGTCTTTATTTTTGGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: TPPVSDLSTPPRLRL*GWEPGKTVFIFGNS Trigger: TGAGTTCCCAAAAATAAAGACTGTTTTTCCTGGCTCCCAGCCCAACAGTCTTAGCCTAGGTGGAGTGCTGAGGTCTGAGACAGGTGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTTCTTCTGTGTTGTCTTaGCTGGACTGTGGACTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IASGLFLLQNTALGAEGFSSVLS*LDCGLC Trigger: ACAGAGTCCACAGTCCAGGCAAGACAACACAGAAGA...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTTTATTTTTGGGAACTCACATGAATGTGGTAATCCACGGCCTGGGCGCTAGATGTAGAAAGCAATaGCACAGACACTGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: QSLFLGTHMNVVIHGLGARCRKQ*HRHCHP Trigger: AGGGTGGCAGTGTCTGTGCCATTGCTTTCTACATCT...AGCGCCCAGGCCGTGGATTACCACATTCATGTGAGTTCCCAAAAATAAAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCATCTTCCTTTTCCTCAAGAAATaGGACCACAAGTATCTGACA | + |
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Preference number: 2 (lower is better) Translates to: LGDNLAGVQVLCLILIIFLFLKK*DHKYLT Trigger: TGTCAGATACTTGTGGTCTCATTTCTTGAGGAAAAG...GAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCAGGCTGTCAGATGCTACCTaGAGGGTCAGGTCATCACAT | + |
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Preference number: 2 (lower is better) Translates to: KTQICQLWWFMYIILAVRLSDAT*RVRSSH Trigger: ATGTGATGACCTGACCCTCCAGGTAGCATCTGACAG...CCTGACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CAA 90 bp | AACAAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTaGGCAGTCAGGAGGCAGAGGCAGGAGGATTCTGAGTTACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NKTQICQLWWFMYII*AVRRQRQEDSELQL Trigger: TAACTGTAACTCAGAATCCTCCTGCCTCTGCCTCCTGACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 72 bp | GCCAGGCAACCTGGGCTGGGCCACAGGACCTGTGTCTaGTGGCCAGTCAGCTGCAGAAGGTCACATGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ARQPGLGHRTCV*WPVSCRRSHEQ Trigger: CTGCTCATGTGACCTTCTGCAGCTGACTGGCCAGCAGACACAGGTCCTGTGGCCCAGCCCAGGTTGCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGTACACGAGGGAGCCGATCTTCTGTGTTGTCTTGCCTGGACTGTGGACTCACCCTGCCAGAGGCTaGCCCAAGAAAAGGAGTCGG | + |
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Preference number: 3 (lower is better) Translates to: LRYTREPIFCVVLPGLWTHPARG*PKKRSR Trigger: CCGACTCCTTTTCTTGGGCAAGCCTCTGGCAGGGTG...AGTCCACAGTCCAGGCAAGACAACACAGAAGATCGGCTCCCTCGTGTACCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 72 bp | CTGTGTCTGCTGGCCAGTCAGCTGCAGAAGGTCACATaGGCAGGCCCAGTGCTAGCCTGTGACAGAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: LCLLASQLQKVT*AGPVLACDRVM Trigger: CATCACTCTGTCACAGGCTAGCACTGGGCCTGCTCATGTGACCTTCTGCAGCTGACTGGCCAGCAGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 72 bp | CATGAATGTGGTAATCCACGGCCTGGGCGCTATTTGTaGCGGCCCAAGGTTGGGAGGCCCAAGGTTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: HECGNPRPGRYL*RPKVGRPKVGM Trigger: CATCCCAACCTTGGGCCTCCCAACCTTGGGCCGTCACAAATAGCGCCCAGGCCGTGGATTACCACATTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR TCA 72 bp | GGGTTCTTGGACTCCAACCCAGGTTGTCTGGCTTGGTaGCAATCTTGCAGGCGTGCAGGTCCTCTGCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: GFLDSNPGCLAW*QSCRRAGPLPH Trigger: ATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 72 bp | AGCTTCCTTAGACAGGTCAGAGGGCTGCCACATCTCTaGTTCCAAAGAAAGGCCTCTCGGTGCTGGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: SFLRQVRGLPHL*FQRKASRCWDQ Trigger: CTGGTCCCAGCACCGAGAGGCCTTTCTTTGGAAGCAGAGATGTGGCAGCCCTCTGACCTGTCTAAGGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR GCA 72 bp | CTGAGCAGCAGAGCTTCCTTAGACAGGTCAGAGGGCTaGCACATCTCTGCTTCCAAAGAAAGGCCTCTCGGT | + |
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Preference number: 3 (lower is better) Translates to: LSSRASLDRSEG*HISASKERPLG Trigger: ACCGAGAGGCCTTTCTTTGGAAGCAGAGATGTGGCAGCCCTCTGACCTGTCTAAGGAAGCTCTGCTGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR CCA 72 bp | GTACACGAGGGAGCCGATCTTCTGTGTTGTCTTGCCTaGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATA | + |
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Preference number: 3 (lower is better) Translates to: VHEGADLLCCLA*TVDSVLPGSAI Trigger: TATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCAAGACAACACAGAAGATCGGCTCCCTCGTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCATGCCTCTGTTACCCTaGAACAGAAAGGGCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGQLSIPHMGSWTPTQVVMPLLP*NRKGTL Trigger: CAGGGTGCCCTTTCTGTTCAAGGGTAACAGAGGCAT...GACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR GCA 72 bp | TTACCCTTGAACAGAAAGGGCACCCTGCCAGAGGCTTaGCCAAGAAAAGGAGTCGGGTACCTGTCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLNRKGTLPEA*PRKGVGYLSDA Trigger: AGCATCTGACAGGTACCCGACTCCTTTTCTTGGGCAAGCCTCTGGCAGGGTGCCCTTTCTGTTCAAGGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CCA 72 bp | GTCAGAGGGCAACTCTCCATCCCCCATATGGGTTCTTaGACTCCAACCCAGGTTGTCTGGCTTGGTGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: VRGQLSIPHMGS*TPTQVVWLGDN Trigger: ATTGTCACCAAGCCAGACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTTTATTTTTGGGAACTCACATGAATGTGGTAATCCACGGCCTGGGCGCTGGCAGAGGAGGATCTTaGAGTCCAAGGCCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSLFLGTHMNVVIHGLGAGRGGS*SPRPAW Trigger: CCAGGCTGGCCTTGGACTCAAAGATCCTCCTCTGCC...AGCGCCCAGGCCGTGGATTACCACATTCATGTGAGTTCCCAAAAATAAAGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR GCA 72 bp | ACTGAAGGGCAGGCCGCTTCAAGGACATTCTCTGGATaGAGACAGGACCATAGCAAGTGGCTTGTTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TEGQAASRTFSG*RQDHSKWLVSP Trigger: AGGAGAAACAAGCCACTTGCTATGGTCCTGTCTGCATCCAGAGAATGTCCTTGAAGCGGCCTGCCCTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR GCA 72 bp | AGCCAAAGTCATTTTAGCAGTCATTTTAGGCTTTCCTaGCCGGAACGGCTGGAGAATCCGACTTCACACGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQSHFSSHFRLS*PERLENPTSHG Trigger: CCCGTGTGAAGTCGGATTCTCCAGCCGTTCCGGGCAGGAAAGCCTAAAATGACTGCTAAAATGACTTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR GCA 72 bp | TGGCTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTaGCTCATTTTGATCATCTTCTGTGGGTTGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WLGDNLAGVQVL*LILIIFCGLFQ Trigger: CTGGAACAACCCACAGAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CCA 72 bp | CCAAGAAAAGGAGTCGGGTACCTGTCAGATGCTACCTaGAGGGTCAGGTCATCACATTCAGATGTAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRKGVGYLSDAT*RVRSSHSDVES Trigger: GCTTTCTACATCTGAATGTGATGACCTGACCCTCCAGGTAGCATCTGACAGGTACCCGACTCCTTTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CCA 72 bp | GACCTCAGCACTCCACCTAGGCTAAGACTGTTGGGCTaGGAGCCAGGAAAAACAGTCTTTATTTTTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DLSTPPRLRLLG*EPGKTVFIFGN Trigger: GTTCCCAAAAATAAAGACTGTTTTTCCTGGCTCCCAGCCCAACAGTCTTAGCCTAGGTGGAGTGCTGAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR TCA 72 bp | CACAACAAGAAGAAAAGTCACCAGGAGATCTGGGTCTaGGACTTCCTATTCTGGCCTCCTATCCCATTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HNKKKSHQEIWV*DFLFWPPIPFP Trigger: TGGGAATGGGATAGGAGGCCAGAATAGGAAGTCTCAGACCCAGATCTCCTGGTGACTTTTCTTCTTGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CCA 72 bp | AAGAACAAAACAACCTTGCAGAGTTTGAGCTGGGTGTaGTGGTTGCACGTGCCTTTAATCTCAGAACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KNKTTLQSLSWV*WLHVPLISELG Trigger: CCCTAGTTCTGAGATTAAAGGCACGTGCAACCACCACACCCAGCTCAAACTCTGCAAGGTTGTTTTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCAGGATCTTCTGTGTTGTCTaGCCTGGACTGTGGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KTQICQLWWFMYIILAVRIFCVV*PGLWTL Trigger: CAGAGTCCACAGTCCAGGCAAGACAACACAGAAGAT...CCTGACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR TCA 72 bp | TTTGCCTTTTCCTCAAGAAATGAGACCACAAGTATCTaGCAACTGAAAGGGGTAATGCCTCTGTTACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FAFSSRNETTSI*QLKGVMPLLPL Trigger: CAAGGGTAACAGAGGCATTACCCCTTTCAGTTGTCAGATACTTGTGGTCTCATTTCTTGAGGAAAAGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CCA 72 bp | AAAAACAATCACATTCTTCCTTTCAGTTGCTATAGCTaGATACAAACAGATTGGGTAATTATAGCTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: KNNHILPFSCYS*IQTDWVIIAHG Trigger: ACCATGAGCTATAATTACCCAATCTGTTTGTATCCAGCTATAGCAACTGAAAGGAAGAATGTGATTGTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCGTAGCTGAGCCCCACTaGTCCCGAAGCCCGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLVAEPH*SRSPGY Trigger: ATATCCCGGGCTTCGGGAGCAGTGGGGCTCAGCTAC...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCTGGTCCAGGACAGCCTaGATGATCCCAAGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQLSIPHMGSWTPTQVVWSRTA*MIPRGP Trigger: TGGGCCCCTTGGGATCATGCAGGCTGTCCTGGACCA...GACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | CTCAGGTACACGAGGGAGCCGATCTTCTGTGTTGTCTaGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRYTREPIFCVV*PGLWTLSFLGL Trigger: CAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCAAGACAACACAGAAGATCGGCTCCCTCGTGTACCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCTTCGAACAATCTGGTTaGCGCAGAGGTTGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLFEQSG*RRGWSE Trigger: CTCACTCCAACCTCTGCGTCAACCAGATTGTTCGAA...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | GCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATCTACTGCACAGTCCTTGGGAATaGTGTGGCCCTCGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGVACNPSTQEIGADLLHSPWE*CGPRHR Trigger: CCTGTGACGAGGGCCACATCATTCCCAAGGACTGTG...CAGTAGATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCTCGGCCATCTTTCCCTaGATCAGCTGGAATTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGQLSIPHMGSWTPTQVVSAIFP*ISWNWP Trigger: CGGCCAATTCCAGCTGATGCAGGGAAAGATGGCCGA...GACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | TGCAGACAGACTCAGGTACACGAGGGAGCCGATCTTCTGTGTTGTCTTGCCTGGTGTGGCACACTCGGCTaGATACAGAATCACACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRQTQVHEGADLLCCLAWCGTLG*IQNHTG Trigger: GCCGGTGTGATTCTGTATGCAGCCGAGTGTGCCACA...CCAGGCAAGACAACACAGAAGATCGGCTCCCTCGTGTACCTGAGTCTGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCTGCATCAGCTGGAATTaGCCGATCTTCTGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLCISWN*PIFWPK Trigger: CTTTGGCCAGAAGATCGGCCAATTCCAGCTGATGCA...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | GCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATCTACTGCCAGGGCTACCTGTGTaGCACACTCGGCTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: AQGVACNPSTQEIGADLLPGLPV*HTRLHT Trigger: TGTATGCAGCCGAGTGTGCCACACAGGTAGCCCTGG...CAGTAGATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | GTTACCCTTGAACAGAAAGGGCACCCTGCCAGAGGCTaGCCCAAGAAAAGGAGTCGGGTACCTGTCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLEQKGHPARG*PKKRSRVPVRC Trigger: GCATCTGACAGGTACCCGACTCCTTTTCTTGGGCAAGCCTCTGGCAGGGTGCCCTTTCTGTTCAAGGGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCCCATGGGGAAGTCATTaGTGTAGCCATTTCCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLPWGSH*CSHFHL Trigger: TAGGTGGAAATGGCTACATCAATGACTTCCCCATGG...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCATTCTGGAGCTCCTCGTCACAGGCTTTaGCGACATTGTAGACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CLDCGLCPSWVCHRHSGAPRHRL*RHCRRT Trigger: AGTACGTCTACAATGTCGCCAAAGCCTGTGACGAGG...AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCATTCTGGAGCTCTGCTTTTAGCTTCATaGAGACAACGTCAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLDCGLCPSWVCHRHSGALLLAS*RQRQSQ Trigger: CTGGCTCTGACGTTGTCTCCATGAAGCTAAAAGCAG...AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | CATTCTCTGGATGCAGACAGGACCATAGCAAGTGGCTaGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSLDADRTIASG*FLLQNTALGAE Trigger: TTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCTGTCTGCATCCAGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | GAAAAAGCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATTTTCCACCTAGACACTaGATGCCGTCCAGGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: EKAQGVACNPSTQEIGADFPPRH*MPSRAT Trigger: GGTAGCCCTGGACGGCATTCAGTGTCTAGGTGGAAA...ATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGCTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | CTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCATCTTCCACCTAGACACTGAATaGCGTCCAGGGCTACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGDNLAGVQVLCLILIIFHLDTE*RPGLPV Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTCTAGGTG...GAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTCATGCAAGTAGGGAATaGTGTGGTCCAGGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IASGLFLLQNTALGAEGFHASRE*CGPGQP Trigger: AGGCTGTCCTGGACCACACCATTCCCTACTTGCATG...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGGACCATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCCGATCTCATACAGTTTaGCATCTCGTAGAAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADRTIASGLFLLQNTALGRSHTV*HLVESG Trigger: GCCGCTTTCTACGAGATGCCAAACTGTATGAGATCG...GCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTATGGTCCTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | GACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTaGATCATCTTCTGTGGGTTGTTCCAGGGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNLAGVQVLCLI*IIFCGLFQGSS Trigger: GGAAGATCCCTGGAACAACCCACAGAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | AAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCAGGAGTGAGCACCGTAGCTaGGCCCCACTGCTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTQICQLWWFMYIILAVRSEHRS*APLLPK Trigger: CTTCGGGAGCAGTGGGGCTCAGCTACGGTGCTCACT...CCTGACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | GGTCTGAGACTTCCTATTCTGGCCTCCTATCCCATTCCCAAAGGGCAAACTGAACATCAGGGCCATTGGTaGTCCAGAACTTGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLRLPILASYPIPKGQTEHQGHW*SRTCCH Trigger: ATGGCAACAAGTTCTGGATCACCAATGGCCCTGATG...TTCAGTTTGCCCTTTGGGAATGGGATAGGAGGCCAGAATAGGAAGTCTCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | CAGGTCCTCTGCCTCATTTTGATCATCTTCTGTGGGTaGTTCCAGGGATCTTCCTCAGCTGGTCAGTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QVLCLILIIFCG*FQGSSSAGQCI Trigger: GATACACTGACCAGCTGAGGAAGATCCCTGGAACAACCCACAGAAGATGATCAAAATGAGGCAGAGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCACTCTCTCAGGTTCTTaGAGTCATTGGTTTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQLSIPHMGSWTPTQVVTLSGS*SHWFDQ Trigger: TTGATCAAACCAATGACTTCAAGAACCTGAGAGAGT...GACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGACTTCCTATTCTGGCCTCCTATCCCATTCCCAAAGGGCAAACTGAACCATTTCGAACAATCTaGTTGACGCAGAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRLPILASYPIPKGQTEPFRTI*LTQRLE Trigger: CTCCAACCTCTGCGTCAACCAGATTGTTCGAAATGG...TTCAGTTTGCCCTTTGGGAATGGGATAGGAGGCCAGAATAGGAAGTCTCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | CAGTCTTTATTTTTGGGAACTCACATGAATGTGGTAATCCACGGCCTGGGCGCTTTTCCCTGCATCAGCTaGAATTGGCCGATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLFLGTHMNVVIHGLGAFPCIS*NWPIFW Trigger: CCAGAAGATCGGCCAATTCCAGCTGATGCAGGGAAA...AGCGCCCAGGCCGTGGATTACCACATTCATGTGAGTTCCCAAAAATAAAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| 3UTR CAA 72 bp | GTCTCAGACCTCAGCACTCCACCTAGGCTAAGACTGTaGGGCTGGGAGCCAGGAAAAACAGTCTTTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSDLSTPPRLRL*GWEPGKTVFIF Trigger: AAAAATAAAGACTGTTTTTCCTGGCTCCCAGCCCAACAGTCTTAGCCTAGGTGGAGTGCTGAGGTCTGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTGGGGCCAGGTTCTCTTaGAGAAACTTAGATATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IASGLFLLQNTALGAEGFGARFS*RNLDIV Trigger: TACTATATCTAAGTTTCTTCAAGAGAACCTGGCCCC...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | ATAGCAAGTGGCTTGTTTCTCCTGCAGAACACGGCTTTGGGCGCAGAAGGGTTTCGGTCAAATCTGTCTTaGCATACACGACTAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: IASGLFLLQNTALGAEGFRSNLS*HTRLGY Trigger: ATATCCTAGTCGTGTATGCCAAGACAGATTTGACCG...AAACCCTTCTGCGCCCAAAGCCGTGTTCTGCAGGAGAAACAAGCCACTTGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCCCAGCTCGCAGGTGTTaGAGCCCCTCATACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTQICQLWWFMYIILAVPARRC*SPSYPA Trigger: AGCTGGGTATGAGGGGCTCCAACACCTGCGAGCTGG...GACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | AAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCAGGCGTCAGAGCCAGCATTaGGTTCACTCATGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTQICQLWWFMYIILAVRRQSQH*VHSWPR Trigger: CCTTGGCCATGAGTGAACCCAATGCTGGCTCTGACG...CCTGACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGGCACACTAGTTTAAGATTCCCTTTTATAAAGCCACTAAAGTCATTAACTGTCGACTTGCCATaGGGCGGGTGTACATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTSLRFPFIKPLKSLTVDLP*GGCTCR Trigger: CCGACATGTACACCCGCCTCATGGCAAGTCGACAGT...TAATGACTTTAGTGGCTTTATAAAAGGGAATCTTAAACTAGTGTGCCTGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR GCA 90 bp | AACAAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCGACGTACTGTCGACTTaGCATGAGGCGGGTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTQICQLWWFMYIILAVDVLST*HEAGVH Trigger: ATGTACACCCGCCTCATGGCAAGTCGACAGTACGTC...GACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGGCACACTAGTTTAAGATTCCCTTTTATAAAGCCACTAAAGTCATTAGATGCCCCGAGAAGCTaGCACAGCGGTCAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTSLRFPFIKPLKSLDAPRS*HSGQIC Trigger: ACAGATTTGACCGCTGTGCCAGCTTCTCGGGGCATC...TAATGACTTTAGTGGCTTTATAAAAGGGAATCTTAAACTAGTGTGCCTGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTCAGATATGCCAGCTGTGGTGGTTCATGTATATAATTTTGGCAGTCTTGAAGTCATTGGTTTaGTCAATCTCTTGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTQICQLWWFMYIILAVLKSLV*SISWAL Trigger: CAAGGCCCAAGAGATTGATCAAACCAATGACTTCAA...GACTGCCAAAATTATATACATGAACCACCACAGCTGGCATATCTGAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS TCA 90 bp | AGGCAATATCGAGTGGGCCCGCCGCGGGACAGCGAGGGGCGACGGTaGTGGCCGCAGTCTCCAACTGGAAACTCGCCGTCCCAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RQYRVGPPRDSEGRR*WPQSPTGNSPSQQP Trigger: CGGCTGCTGGGACGGCGAGTTTCCAGTTGGAGACTGCGGCCATCACCGTCGCCCCTCGCTGTCCCGCGGCGGGCCCACTCGATATTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | TGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCATTCTGGAGCTACCAGCTCGCAGGTGTaGGAGCCCCTCATACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLDCGLCPSWVCHRHSGATSSQV*EPLIPS Trigger: GCTGGGTATGAGGGGCTCCAACACCTGCGAGCTGGT...AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS GCA 90 bp | CTGGTTGACGCAGAGGTTGGAGTGAGCACCGTAGCTGAGCCCCACTaGTCCCGAAGCCCGGGATATCTCTTCCATTACCAACACATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVDAEVGVSTVAEPH*SRSPGYLFHYQHMF Trigger: GAACATGTGTTGGTAATGGAAGAGATATCCCGGGCTTCGGGAGCAGTGGGGCTCAGCTACGGTGCTCACTCCAACCTCTGCGTCAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS GCA 90 bp | GCCCTCGTCACAGGCTTTGGCGACATTGTAGACGTACTGTCGACTTaGCATGAGGCGGGTGTACATGTCGGCCATCTTTCCCTGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVTGFGDIVDVLST*HEAGVHVGHLSLHQ Trigger: CTGATGCAGGGAAAGATGGCCGACATGTACACCCGCCTCATGGCAAGTCGACAGTACGTCTACAATGTCGCCAAAGCCTGTGACGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CCA 90 bp | AGCCATTTCCACCTAGACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCGGCTGCATACAGAATCACACCGGCACAGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHFHLDTECRPGLPV*HTRLHTESHRHSPW Trigger: CCAAGGACTGTGCCGGTGTGATTCTGTATGCAGCCGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTCTAGGTGGAAATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | CTGTGTTGTCTTGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCGGTTTGATCAATCTCTaGGGCCTTGGGGGCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCCLAWTVDSVLPGSAIGGLINL*GLGGQV Trigger: AACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACC...GCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCAAGACAACACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 90 bp | CGTCACAGGCTTTGGCGACATTGTAGACGTACTGTCGACTTGCCATaGGGCGGGTGTACATGTCGGCCATCTTTCCCTGCATCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHRLWRHCRRTVDLP*GGCTCRPSFPASAG Trigger: TCCAGCTGATGCAGGGAAAGATGGCCGACATGTACACCCGCCTCATGGCAAGTCGACAGTACGTCTACAATGTCGCCAAAGCCTGTGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | TGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCATTCTGGAGCTCTGCATCAGCTGGAATaGGCCGATCTTCTGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLDCGLCPSWVCHRHSGALHQLE*ADLLAK Trigger: TTTGGCCAGAAGATCGGCCAATTCCAGCTGATGCAG...AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | AGATGGGACGGGTGTGGGGTTGCTAAGGTGCTGACTCCACCTGTCTCAGACCTCCCGATCTCATACAGTTaGGCATCTCGTAGAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RWDGCGVAKVLTPPVSDLPISYS*ASRRKR Trigger: CCGCTTTCTACGAGATGCCAAACTGTATGAGATCGG...GAGGTCTGAGACAGGTGGAGTCAGCACCTTAGCAACCCCACACCCGTCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 90 bp | GTACGCCCAGGCTCCCCAGCTGTTTCCAGAACTCTCTCAGGTTCTTaGAGTCATTGGTTTGATCAATCTCTTGGGCCTTGGGGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRPGSPAVSRTLSGS*SHWFDQSLGPWGPG Trigger: ACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACCAATGACTTCAAGAACCTGAGAGAGTTCTGGAAACAGCTGGGGAGCCTGGGCGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | TGCCTGGACTGTGGACTCTGTCCTTCCTGGGTCTGCCATAGGCATTCTGGAGCTTCACCACTGATGAGCTaGGGAAGGTATTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLDCGLCPSWVCHRHSGASPLMS*GRYFSF Trigger: GAAAGAGAAATACCTTCCCAAGCTCATCAGTGGTGA...AGCTCCAGAATGCCTATGGCAGACCCAGGAAGGACAGAGTCCACAGTCCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | GAAAAAGCACAGGGTGTTGCCTGTAATCCCAGCACTCAAGAGATAGGGGCAGATACGTCAGAGCCAGCATaGGGTTCACTCATGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKAQGVACNPSTQEIGADTSEPA*GSLMAK Trigger: CTTGGCCATGAGTGAACCCAATGCTGGCTCTGACGT...ATCTGCCCCTATCTCTTGAGTGCTGGGATTACAGGCAACACCCTGTGCTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | AGAGGGCAACTCTCCATCCCCCATATGGGTTCTTGGACTCCAACCCAGGTTGTCGGGGGCCAGGTTCTCTaGAAGAAACTTAGATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGQLSIPHMGSWTPTQVVGGQVL*KKLRYS Trigger: ACTATATCTAAGTTTCTTCAAGAGAACCTGGCCCCC...GACAACCTGGGTTGGAGTCCAAGAACCCATATGGGGGATGGAGAGTTGCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS-3UTR CAA 90 bp | CTTGGTGACAATCTTGCAGGCGTGCAGGTCCTCTGCCTCATTTTGATCATCTTCTTAGCGGCAGGAACCTaGCAGTCTTCAAAGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGDNLAGVQVLCLILIIFLAAGT*QSSKTS Trigger: GCTGGTCTTTGAAGACTGCAAGGTTCCTGCCGCTAA...GAAGATGATCAAAATGAGGCAGAGGACCTGCACGCCTGCAAGATTGTCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 90 bp | CTGTCTTGGCATACACGACTAGGATATCAGCATCAGGGCCATTGGTaGTCCAGAACTTGTTGCCATTCAGAACATAGTGATCTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSWHTRLGYQHQGHW*SRTCCHSEHSDLLS Trigger: AGAAAGGAGATCACTATGTTCTGAATGGCAACAAGTTCTGGATCACCAATGGCCCTGATGCTGATATCCTAGTCGTGTATGCCAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | CGAGTGGGCCCGCCGCGGGACAGCGAGGGGCGACGGTaGTGGCCGCAGTCTCCAACTGGAAACTCGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVGPPRDSEGRR*WPQSPTGNSPS Trigger: GGACGGCGAGTTTCCAGTTGGAGACTGCGGCCATCACCGTCGCCCCTCGCTGTCCCGCGGCGGGCCCACTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS GCA 72 bp | GCAGAGGTTGGAGTGAGCACCGTAGCTGAGCCCCACTaGTCCCGAAGCCCGGGATATCTCTTCCATTACCAA | + |
|
Preference number: 6 (lower is better) Translates to: AEVGVSTVAEPH*SRSPGYLFHYQ Trigger: TTGGTAATGGAAGAGATATCCCGGGCTTCGGGAGCAGTGGGGCTCAGCTACGGTGCTCACTCCAACCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CCA 72 bp | CACCTAGACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCGGCTGCATACAGAATCACACCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLDTECRPGLPV*HTRLHTESHRH Trigger: GTGCCGGTGTGATTCTGTATGCAGCCGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTCTAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | CACTCGGCTGCATACAGAATCACACCGGCACAGTCCTaGGGAATGATGTGGCCCTCGTCACAGGCTTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HSAAYRITPAQS*GMMWPSSQALA Trigger: CGCCAAAGCCTGTGACGAGGGCCACATCATTCCCAAGGACTGTGCCGGTGTGATTCTGTATGCAGCCGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS GCA 72 bp | AATGCCGTCCAGGGCTACCTGTGTGGCACACTCGGCTaGATACAGAATCACACCGGCACAGTCCTTGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: NAVQGYLCGTLG*IQNHTGTVLGN Trigger: ATTCCCAAGGACTGTGCCGGTGTGATTCTGTATGCAGCCGAGTGTGCCACACAGGTAGCCCTGGACGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CCA 72 bp | TACATGTCGGCCATCTTTCCCTGCATCAGCTGGAATTaGCCGATCTTCTGGCCAAAGGCCTCCCTCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: YMSAIFPCISWN*PIFWPKASLTC Trigger: GCATGTGAGGGAGGCCTTTGGCCAGAAGATCGGCCAATTCCAGCTGATGCAGGGAAAGATGGCCGACATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | TTACTCTCCTGGCTCAGGACGTTAGCGGCAGGAACCTaGCAGTCTTCAAAGACCAGCTCGCAGGTGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSWLRTLAAGT*QSSKTSSQVLE Trigger: CTCCAACACCTGCGAGCTGGTCTTTGAAGACTGCAAGGTTCCTGCCGCTAACGTCCTGAGCCAGGAGAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | GTACATGTCGGCCATCTTTCCCTGCATCAGCTGGAATaGGCCGATCTTCTGGCCAAAGGCCTCCCTCACATG | + |
|
Preference number: 6 (lower is better) Translates to: VHVGHLSLHQLE*ADLLAKGLPHM Trigger: CATGTGAGGGAGGCCTTTGGCCAGAAGATCGGCCAATTCCAGCTGATGCAGGGAAAGATGGCCGACATGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | CTTTGGCGACATTGTAGACGTACTGTCGACTTGCCATaGGGCGGGTGTACATGTCGGCCATCTTTCCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LWRHCRRTVDLP*GGCTCRPSFPA Trigger: TGCAGGGAAAGATGGCCGACATGTACACCCGCCTCATGGCAAGTCGACAGTACGTCTACAATGTCGCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | CTGCATACAGAATCACACCGGCACAGTCCTTGGGAATaGTGTGGCCCTCGTCACAGGCTTTGGCGACATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LHTESHRHSPWE*CGPRHRLWRHC Trigger: ACAATGTCGCCAAAGCCTGTGACGAGGGCCACATCATTCCCAAGGACTGTGCCGGTGTGATTCTGTATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS GCA 72 bp | ACAGGCTTTGGCGACATTGTAGACGTACTGTCGACTTaGCATGAGGCGGGTGTACATGTCGGCCATCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGFGDIVDVLST*HEAGVHVGHLS Trigger: GGAAAGATGGCCGACATGTACACCCGCCTCATGGCAAGTCGACAGTACGTCTACAATGTCGCCAAAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CCA 72 bp | TGCCCCGAGAAGCTGGCACAGCGGTCAAATCTGTCTTaGCATACACGACTAGGATATCAGCATCAGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPEKLAQRSNLS*HTRLGYQHQGH Trigger: ATGGCCCTGATGCTGATATCCTAGTCGTGTATGCCAAGACAGATTTGACCGCTGTGCCAGCTTCTCGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | ATGCCCCGAGAAGCTGGCACAGCGGTCAAATCTGTCTaGGCATACACGACTAGGATATCAGCATCAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MPREAGTAVKSV*AYTTRISASGP Trigger: TGGCCCTGATGCTGATATCCTAGTCGTGTATGCCAAGACAGATTTGACCGCTGTGCCAGCTTCTCGGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | CTCACTTCACTGGTCCCAGCTCCGATCTCATACAGTTaGGCATCTCGTAGAAAGCGGCCCATGGGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LTSLVPAPISYS*ASRRKRPMGKS Trigger: TGACTTCCCCATGGGCCGCTTTCTACGAGATGCCAAACTGTATGAGATCGGAGCTGGGACCAGTGAAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | AAGGCTGTGATGCCCCGAGAAGCTGGCACAGCGGTCAAATCTGTCTaGGCATACACGACTAGGATATCAGCATCAGGGCCATTGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: KAVMPREAGTAVKSV*AYTTRISASGPLVI Trigger: GATCACCAATGGCCCTGATGCTGATATCCTAGTCGTGTATGCCAAGACAGATTTGACCGCTGTGCCAGCTTCTCGGGGCATCACAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | TTAGCGGCAGGAACCTTGCAGTCTTCAAAGACCAGCTCGCAGGTGTaGGAGCCCCTCATACCCAGCTTGTCAAGCTTCTTGGAGGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: LAAGTLQSSKTSSQV*EPLIPSLSSFLEVL Trigger: TAGTACCTCCAAGAAGCTTGACAAGCTGGGTATGAGGGGCTCCAACACCTGCGAGCTGGTCTTTGAAGACTGCAAGGTTCCTGCCGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | TATGACGAAGCTGCTTCTGCTCCTCGTTTAGCCCGTTaGTATCATCGTCCACAGGCAATATCGAGTGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: YDEAASAPRLAR*YHRPQAISSGP Trigger: GGGCCCACTCGATATTGCCTGTGGACGATGATATCAACGGGCTAAACGAGGAGCAGAAGCAGCTTCGTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CCA 72 bp | TCACTTCACTGGTCCCAGCTCCGATCTCATACAGTTTaGCATCTCGTAGAAAGCGGCCCATGGGGAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLHWSQLRSHTV*HLVESGPWGSH Trigger: ATGACTTCCCCATGGGCCGCTTTCTACGAGATGCCAAACTGTATGAGATCGGAGCTGGGACCAGTGAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | ACCAGCTCGCAGGTGTTGGAGCCCCTCATACCCAGCTaGTCAAGCTTCTTGGAGGTACTAAAACCAGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: TSSQVLEPLIPS*SSFLEVLKPGI Trigger: TATGCCTGGTTTTAGTACCTCCAAGAAGCTTGACAAGCTGGGTATGAGGGGCTCCAACACCTGCGAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | AGCTCGCAGGTGTTGGAGCCCCTCATACCCAGCTTGTCAAGCTTCTaGGAGGTACTAAAACCAGGCATACCCTTCTCCACAATGAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSQVLEPLIPSLSSF*EVLKPGIPFSTMKA Trigger: AGCCTTCATTGTGGAGAAGGGTATGCCTGGTTTTAGTACCTCCAAGAAGCTTGACAAGCTGGGTATGAGGGGCTCCAACACCTGCGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | TCTTCAAAGACCAGCTCGCAGGTGTTGGAGCCCCTCATACCCAGCTaGTCAAGCTTCTTGGAGGTACTAAAACCAGGCATACCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSKTSSQVLEPLIPS*SSFLEVLKPGIPFS Trigger: GGAGAAGGGTATGCCTGGTTTTAGTACCTCCAAGAAGCTTGACAAGCTGGGTATGAGGGGCTCCAACACCTGCGAGCTGGTCTTTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | TGGCATCTCGTAGAAAGCGGCCCATGGGGAAGTCATTaGTGTAGCCATTTCCACCTAGACACTGAATGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WHLVESGPWGSH*CSHFHLDTECR Trigger: ACGGCATTCAGTGTCTAGGTGGAAATGGCTACATCAATGACTTCCCCATGGGCCGCTTTCTACGAGATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | GCTTTTAGCTTCATGGAGACAACGTCAGAGCCAGCATaGGGTTCACTCATGGCCAAGGCTCCGATGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: AFSFMETTSEPA*GSLMAKAPMNS Trigger: TGAGTTCATCGGAGCCTTGGCCATGAGTGAACCCAATGCTGGCTCTGACGTTGTCTCCATGAAGCTAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | GTGTTGGAGCCCCTCATACCCAGCTTGTCAAGCTTCTaGGAGGTACTAAAACCAGGCATACCCTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VLEPLIPSLSSF*EVLKPGIPFST Trigger: TGTGGAGAAGGGTATGCCTGGTTTTAGTACCTCCAAGAAGCTTGACAAGCTGGGTATGAGGGGCTCCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | CCCCAGCTGTTTCCAGAACTCTCTCAGGTTCTTGAAGTCATTGGTTaGATCAATCTCTTGGGCCTTGGGGGCCAGGTTCTCTTGAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQLFPELSQVLEVIG*INLLGLGGQVLLKK Trigger: TTTCTTCAAGAGAACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACCAATGACTTCAAGAACCTGAGAGAGTTCTGGAAACAGCTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | TTCTTTTCTGCTTTTAGCTTCATGGAGACAACGTCAGAGCCAGCATaGGGTTCACTCATGGCCAAGGCTCCGATGAACTCACCACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FFSAFSFMETTSEPA*GSLMAKAPMNSPLM Trigger: CATCAGTGGTGAGTTCATCGGAGCCTTGGCCATGAGTGAACCCAATGCTGGCTCTGACGTTGTCTCCATGAAGCTAAAAGCAGAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 90 bp | GTCATTGGTTTGATCAATCTCTTGGGCCTTGGGGGCCAGGTTCTCTaGAAGAAACTTAGATATAGTATGACGAAGCTGCTTCTGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VIGLINLLGLGGQVL*KKLRYSMTKLLLLL Trigger: GAGGAGCAGAAGCAGCTTCGTCATACTATATCTAAGTTTCTTCAAGAGAACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACCAATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS CAA 72 bp | TCTCAGGTTCTTGAAGTCATTGGTTTGATCAATCTCTaGGGCCTTGGGGGCCAGGTTCTCTTGAAGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SQVLEVIGLINL*GLGGQVLLKKL Trigger: AAGTTTCTTCAAGAGAACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACCAATGACTTCAAGAACCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
||
| CDS CAA 90 bp | CCAGAACTCTCTCAGGTTCTTGAAGTCATTGGTTTGATCAATCTCTaGGGCCTTGGGGGCCAGGTTCTCTTGAAGAAACTTAGATATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PELSQVLEVIGLINL*GLGGQVLLKKLRYS Trigger: ACTATATCTAAGTTTCTTCAAGAGAACCTGGCCCCCAAGGCCCAAGAGATTGATCAAACCAATGACTTCAAGAACCTGAGAGAGTTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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| CDS TCA 72 bp | CATACACGACTAGGATATCAGCATCAGGGCCATTGGTaGTCCAGAACTTGTTGCCATTCAGAACATAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HTRLGYQHQGHW*SRTCCHSEHSD Trigger: ATCACTATGTTCTGAATGGCAACAAGTTCTGGATCACCAATGGCCCTGATGCTGATATCCTAGTCGTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028807.6 |
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