Pregenerated sensors for ITPRIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000117975Ensembl transcript IDs: ENSMUST00000095998.7
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTCCTGCCCGGGTGCTCAGCAGACAAGGAGCCACTGATGTTCTaGCCATGGCCTTCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PVLPGCSADKEPLMF*PWPSRDLSLEAKGK Trigger: CTTCCCCTTCGCTTCCAGGGAAAGATCACGGGAAGGCCATGGGCAGAACATCAGTGGCTCCTTGTCTGCTGAGCACCCGGGCAGGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | AGGCAGCATGAACCCCTAAGAGCCCTGCTGCTTCCAAAGCAGCCCTaGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTCAGCAGACAA | + |
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Preference number: 1 (lower is better) Translates to: RQHEPLRALLLPKQP*CGTVSCPARVLSRQ Trigger: TTGTCTGCTGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCAGCAGGGCTCTTAGGGGTTCATGCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | TCCCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTGGGTCTTaGCTTCTGGAGGCTGGTTCTTGGTTGCCGGGCACTCCTGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: SLEAKGKLKEAQVGS*LLEAGSWLPGTPGN Trigger: GTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | CTGCCCGGGTGCTCAGCAGACAAGGAGCCACTGATGTTCTGCCCATaGCCTTCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LPGCSADKEPLMFCP*PSRDLSLEAKGKLK Trigger: CTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGAAGGCCATGGGCAGAACATCAGTGGCTCCTTGTCTGCTGAGCACCCGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 90 bp | GCCCATGGCCTTCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTaGAGGAGGCTCAGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: AHGLPVIFPWKRRGS*RRLRLGLGFWRLVL Trigger: AAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGAAGGCCATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 90 bp | AGGAGGCTCAGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTTGGTTaGCGGGCACTCCTGGAAACACAGCCGGATATGAGTGAGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RRLRLGLGFWRLVLG*RALLETQPDMSEPG Trigger: TCCTGGCTCACTCATATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 90 bp | CGCATGCTCAGTTTAACCCCCACCGCCGGTACTCAAGTATCCTATTaGCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCCACCACCACT | + |
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Preference number: 1 (lower is better) Translates to: RMLSLTPTAGTQVSY*LWLLCTQQILSTTT Trigger: AGTGGTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGTTAAACTGAGCATGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | TCCAGCCTCAGGCTCTGGTCTTGTCTGGGGCTCACAACGCTCCTTTaGGTAACCAGGCTATGCTTGAACGACTCATATAGATCCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SSLRLWSCLGLTTLL*VTRLCLNDSYRSPV Trigger: CACTGGGGATCTATATGAGTCGTTCAAGCATAGCCTGGTTACCCAAAGGAGCGTTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 90 bp | ACCATCCTGGTAGCTCCTCTTTGCTATGGAACACAGAACGGACTATaGTACAGAAAGGACTGCATTCTGGTCAGTGCTTGCGCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TILVAPLCYGTQNGL*YRKDCILVSACALS Trigger: AGAGAGAGCGCAAGCACTGACCAGAATGCAGTCCTTTCTGTAGCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | CTGTGGCTTATAAGCTCACCTTTCCCTATGACCAGGACCCCAAGATaGGTTAGAGATATCCTAACCCTTGTCCCAGGGATCTCTAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LWLISSPFPMTRTPR*VRDILTLVPGISSF Trigger: AAAGCTAGAGATCCCTGGGACAAGGGTTAGGATATCTCTAACCCATCTTGGGGTCCTGGTCATAGGGAAAGGTGAGCTTATAAGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 90 bp | TCTGGAAGGCTAGCAGGCGCTACCTCTTTCTTACTGTTTCTTCTTTaGCCCACTGTAAAAGTTCCTAAGGAGATGTGGCGAAGAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: SGRLAGATSFLLFLL*PTVKVPKEMWRRNP Trigger: GGGATTTCTTCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTAAGAAAGAGGTAGCGCCTGCTAGCCTTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCAAAGCAGCCCTGGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTCAGGCTTCCTGGGAAACTaGGCCTCGGCTCCCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: CFQSSPGVGQSPVLPGCSGFLGN*ASAPSR Trigger: TCTAGAGGGAGCCGAGGCTCAGTTTCCCAGGAAGCC...TGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTGGGCAGATGGCTGGGGCCTaGAACGCCTGGGGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SRDLSLEAKGKLKEAQVGQMAGA*NAWGAV Trigger: CACTGCACCCCAGGCGTTCCAGGCCCCAGCCATCTG...CCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAACTGGAGGCACTGGGTaGGGCCCTCTTGGCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: PHRRYSSILLPLASVHPATGGTG*GPLGIR Trigger: CCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGT...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCACCATCCTGGTAGCTCCTCTTTGCTATGGAACACAGAACGGACTATGCGGTCGACGCACGGGATaGCTCTCCCTCCTCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: PSTILVAPLCYGTQNGLCGRRTG*LSLLNP Trigger: GGGGTTGAGGAGGGAGAGCCATCCCGTGCGTCGACC...GCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TTACTGTGCACGATGCGGTTCCAAGGCTGTGAATTCCCACATCTGTCCCCATTCGGGGCCTGGAACGCCTaGGGTGCAGTGCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLCTMRFQGCEFPHLSPFGAWNA*GAVLGL Trigger: GAGACCCAGCACTGCACCCCAGGCGTTCCAGGCCCC...GAATGGGGACAGATGTGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGTCCGAGGACCAGAGCTGGGTTTTCATAGTGCCTGTGGCTTATAAGCTCGAGGAGAGGGGCTTCTaGGCCAGCACCCAGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SGSEDQSWVFIVPVAYKLEERGF*ASTQCG Trigger: ACCACACTGGGTGCTGGCCCAGAAGCCCCTCTCCTC...GAGCTTATAAGCCACAGGCACTATGAAAACCCAGCTCTGGTCCTCGGACCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CAA 90 bp | GCGCATGCTCAGTTTAACCCCCACCGCCGGTACTCAAGTATCCTATaGCCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCCACCACCAC | + |
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Preference number: 2 (lower is better) Translates to: AHAQFNPHRRYSSIL*PLASVHPADPLHHH Trigger: GTGGTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGTTAAACTGAGCATGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGGCTCACCTTTCCCTATaGCCAGGACCCCAAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: VQKRLEALGEALLALGTGAHLSL*PGPQDG Trigger: CCCATCTTGGGGTCCTGGTCATAGGGAAAGGTGAGC...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTGGGAGATTCATCTGCAGATaGCTGGGGCCTGGAACGCCT | + |
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Preference number: 2 (lower is better) Translates to: SRDLSLEAKGKLKEAQVGRFICR*LGPGTP Trigger: AGGCGTTCCAGGCCCCAGCCATCTGCAGATGAATCT...CCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCCACCACGCGGTTCCAAGGCTGTaGATTCCCACATCTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSILLPLASVHPADPLHHAVPRL*IPTSVP Trigger: GGGGACAGATGTGGGAATTCACAGCCTTGGAACCGC...GTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGGTCCTTCTGCCATACTaGTGGCTGGTAAGACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VQKRLEALGEALLALGTGVLLPY*WLVRPA Trigger: TGCTGGTCTTACCAGCCAGCAGTATGGCAGAAGGAC...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCCACCACAGCAGGGGATGCACCTaGGTAAGATGTGTGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSILLPLASVHPADPLHHSRGCT*VRCVPE Trigger: CTCAGGCACACATCTTACTCAGGTGCATCCCCTGCT...GTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCACCATCCTGGTAGCTCCTCTTTGCTATGGAACACAGAACGGACTATGCTCACTCTGTAGGGCCTaGCTTCCTGGGAAACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSTILVAPLCYGTQNGLCSLCRA*LPGKLS Trigger: GCTCAGTTTCCCAGGAAGCCAGGCCCTACAGAGTGA...GCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTGGGCCCAAACCCAAACAATaGTTTTACCAACAAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SRDLSLEAKGKLKEAQVGPKPKQ*FYQQAP Trigger: GGGGGCTTGTTGGTAAAACCATTGTTTGGGTTTGGG...CCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGCTGGTAGCTCCTCTTTaGTATGGAACACAGAACGGA | + |
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Preference number: 2 (lower is better) Translates to: VQKRLEALGEALLALGTGLVAPL*YGTQNG Trigger: TCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAG...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCCTCAGGCTCTGGTCTTGTCTGGGGCTCACAACGCTCCTTTGGGTAACCAGCTCCTCTTTGCTATaGAACACAGAACGGACTATG | + |
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Preference number: 2 (lower is better) Translates to: SSLRLWSCLGLTTLLWVTSSSLL*NTERTM Trigger: CATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCT...GGTTACCCAAAGGAGCGTTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGTCCGAGGACCAGAGCTGGGTTTTCATAGTGCCTGTGGCTTATAAGCTCCCAACTCAGCCACTGTaGGACCTCTATTACTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGSEDQSWVFIVPVAYKLPTQPL*DLYYCA Trigger: TGCACAGTAATAGAGGTCCCACAGTGGCTGAGTTGG...GAGCTTATAAGCCACAGGCACTATGAAAACCCAGCTCTGGTCCTCGGACCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGAACGACTCATATAGATCCCCAGTGAGCCCAGCCTCTACCACCTTCTTTGTGTGCAGAAAAGACTaGAGGCACTGGGTGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: CLNDSYRSPVSPASTTFFVCRKD*RHWVRP Trigger: GGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCACAC...AAAGAAGGTGGTAGAGGCTGGGCTCACTGGGGATCTATATGAGTCGTTCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTTACTGTTTCTTCTTTGGCCCACTGTAAAAGTTCCTAAGGAGATGTGGCGAACGCCTGGGGTGCAGTaGTGGGTCTCAGATCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLLFLLWPTVKVPKEMWRTPGVQ*WVSDPQ Trigger: CTGGGGATCTGAGACCCAGCACTGCACCCCAGGCGT...TCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAACAGACAGTCAAGGTCAAGTGGAAAAGAAGCTGCTGGGTCCTGGAGTCCAACACAGAACGGACTATaGTACAGAAAGGACTGCATT | + |
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Preference number: 2 (lower is better) Translates to: PNRQSRSSGKEAAGSWSPTQNGL*YRKDCI Trigger: AATGCAGTCCTTTCTGTAGCATAGTCCGTTCTGTGT...TGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | CCTAAGAGCCCTGCTGCTTCCAAAGCAGCCCTGGTGTaGGACAGTCTCCTGTCCTGCCCGGGTGCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: PKSPAASKAALV*DSLLSCPGAQQ Trigger: CTGCTGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCAGCAGGGCTCTTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | GAACCCCTAAGAGCCCTGCTGCTTCCAAAGCAGCCCTaGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: EPLRALLLPKQP*CGTVSCPARVL Trigger: GAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCAGCAGGGCTCTTAGGGGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 72 bp | AGCCCTGGTGTGGGACAGTCTCCTGTCCTGCCCGGGTaGTCAGCAGACAAGGAGCCACTGATGTTCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SPGVGQSPVLPG*SADKEPLMFCP Trigger: TGGGCAGAACATCAGTGGCTCCTTGTCTGCTGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | GCCTCGGCTCCCTCTAGATCTACTGTGTTTCCTGTGTaGGGTCACAGGGCCCAGGAAGGTCGACGCACGGGA | + |
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Preference number: 3 (lower is better) Translates to: ASAPSRSTVFPV*GHRAQEGRRTG Trigger: TCCCGTGCGTCGACCTTCCTGGGCCCTGTGACCTCACACAGGAAACACAGTAGATCTAGAGGGAGCCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | CTGTCCTGCCCGGGTGCTCAGCAGACAAGGAGCCACTaGTGTTCTGCCCATGGCCTTCCCGTGATCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSCPGAQQTRSH*CSAHGLPVIFP Trigger: GGGAAAGATCACGGGAAGGCCATGGGCAGAACATCAGTGGCTCCTTGTCTGCTGAGCACCCGGGCAGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 72 bp | CCCGGGTGCTCAGCAGACAAGGAGCCACTGATGTTCTaGCCATGGCCTTCCCGTGATCTTTCCCTGGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: PGCSADKEPLMF*PWPSRDLSLEA Trigger: CGCTTCCAGGGAAAGATCACGGGAAGGCCATGGGCAGAACATCAGTGGCTCCTTGTCTGCTGAGCACCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | TGCACATTGAGTAGGCTCCATGACTGGGTGCTAGGGTaGCAATTGGAGCTGCGGAGGGGCAGGACCGCGCAT | + |
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Preference number: 3 (lower is better) Translates to: CTLSRLHDWVLG*QLELRRGRTAH Trigger: ATGCGCGGTCCTGCCCCTCCGCAGCTCCAATTGTCACCCTAGCACCCAGTCATGGAGCCTACTCAATGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | AGAAGCTGCTGGGTCCTGGAGTCCAGCCTCAGGCTCTaGTCTTGTCTGGGGCTCACAACGCTCCTTTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: RSCWVLESSLRL*SCLGLTTLLWV Trigger: TACCCAAAGGAGCGTTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGACTCCAGGACCCAGCAGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | ACCCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTaGCTTCTGTGCACCCAGCAGATCCTCTCCACCACC | + |
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Preference number: 3 (lower is better) Translates to: TPTAGTQVSYCL*LLCTQQILSTT Trigger: GGTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | GAAGGAGGCTCAGGTTGGGTCTTGGCTTCTGGAGGCTaGTTCTTGGTTGCCGGGCACTCCTGGAAACACAGC | + |
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Preference number: 3 (lower is better) Translates to: EGGSGWVLASGG*FLVAGHSWKHS Trigger: GCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | CCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTaGGTCTTGGCTTCTGGAGGCTGGTTCTTGGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: PGSEGEAEGGSG*VLASGGWFLVA Trigger: GGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | CTTCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTaGAGGAGGCTCAGGTTGGGTCTTGGCTTCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LPVIFPWKRRGS*RRLRLGLGFWR Trigger: CCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | ACATCTGTCCCCATTCAAGATTCATCTGCAGATGGCTaGGGCCTGGAACGCCTGGGGTGCAGTGCTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: TSVPIQDSSADG*GLERLGCSAGS Trigger: AGACCCAGCACTGCACCCCAGGCGTTCCAGGCCCCAGCCATCTGCAGATGAATCTTGAATGGGGACAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | GCTCAGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTTaGTTGCCGGGCACTCCTGGAAACACAGCCGGATAT | + |
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Preference number: 3 (lower is better) Translates to: AQVGSWLLEAGS*LPGTPGNTAGY Trigger: ATATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | ACCATGGCGTGTGCAGAAAAGACTGGAGGCACTGGGTaGGGCCCTCTTGGCATTAGGAACTGGGAGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: TMACAEKTGGTG*GPLGIRNWEML Trigger: GAGCATCTCCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCACACGCCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR TCA 72 bp | CAAGGAGCCACTGATGTTCTGCCCATGGCCTTCCCGTaGTCTTTCCCTGGAAGCGAAGGGGAAGCTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QGATDVLPMAFP*SFPGSEGEAEG Trigger: TCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGAAGGCCATGGGCAGAACATCAGTGGCTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR GCA 72 bp | AGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTTGGTTaGCGGGCACTCCTGGAAACACAGCCGGATATGAGT | + |
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Preference number: 3 (lower is better) Translates to: RLGLGFWRLVLG*RALLETQPDMS Trigger: ACTCATATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| 3UTR CCA 72 bp | GTCGAACTTTGTCCCTGTGTCCTTCTGCCATACTGCTaGCTGGTAAGACCAGCAACGGAGAGAGGAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VELCPCVLLPYC*LVRPATERGEG Trigger: CCCCTCTCCTCTCTCCGTTGCTGGTCTTACCAGCCAGCAGTATGGCAGAAGGACACAGGGACAAAGTTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR GCA 72 bp | AGTTTAACCCCCACCGCCGGTACTCAAGTATCCTATTaGCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLTPTAGTQVSY*LWLLCTQQILS Trigger: GGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGTTAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR TCA 72 bp | TTCCTTCACTCTGTAGGGCCTGGCTTCCTGGGAAACTaGGCCTCGGCTCCCTCTAGATCTACTGTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLHSVGPGFLGN*ASAPSRSTVFP Trigger: AGGAAACACAGTAGATCTAGAGGGAGCCGAGGCTCAGTTTCCCAGGAAGCCAGGCCCTACAGAGTGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR GCA 72 bp | ACTCAGCCACTGTGGGACCTCTATTACTGTGCACGATaGGGTTCCAAGGCTGTGAATTCCCACATCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TQPLWDLYYCAR*GSKAVNSHICP Trigger: GGGACAGATGTGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAATAGAGGTCCCACAGTGGCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | CACCACTTAACCCTGGTGGCAAAATCGTCTATCTTCTaGAGAGCTTTGAGACCACAGGAGGCACGTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HHLTLVAKSSIF*RALRPQEARVG Trigger: CCCCACACGTGCCTCCTGTGGTCTCAAAGCTCTCCAGAAGATAGACGATTTTGCCACCAGGGTTAAGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | TGGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAGTaGAAAAGAAGCTGCTGGGTCCTGGAGTCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WRRNPKQTVKVK*KRSCWVLESSL Trigger: GAGGCTGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR GCA 72 bp | TTAGCCAACTCAGCCACTGTGGGACCTCTATTACTGTaGACGATGCGGTTCCAAGGCTGTGAATTCCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LANSATVGPLLL*TMRFQGCEFPH Trigger: ATGTGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAATAGAGGTCCCACAGTGGCTGAGTTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | GATCCCCAGCACCATCCTGGTAGCTCCTCTTTGCTATaGAACACAGAACGGACTATGCTACAGAAAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: DPQHHPGSSSLL*NTERTMLQKGL Trigger: CAGTCCTTTCTGTAGCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR GCA 72 bp | TCTCAGATCCCCAGCACCATCCTGGTAGCTCCTCTTTaGTATGGAACACAGAACGGACTATGCTACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQIPSTILVAPL*YGTQNGLCYRK Trigger: CTTTCTGTAGCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGGGATCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | CACAGAACGGACTATGCTACAGAAAGGACTGCATTCTaGTCAGTGCTTGCGCTCTCTCTAACTCAGTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: HRTDYATERTAF*SVLALSLTQYP Trigger: AGGGTACTGAGTTAGAGAGAGCGCAAGCACTGACCAGAATGCAGTCCTTTCTGTAGCATAGTCCGTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | ATAAGCTCACCTTTCCCTATGACCAGGACCCCAAGATaGGTTAGAGATATCCTAACCCTTGTCCCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: ISSPFPMTRTPR*VRDILTLVPGI Trigger: GATCCCTGGGACAAGGGTTAGGATATCTCTAACCCATCTTGGGGTCCTGGTCATAGGGAAAGGTGAGCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCTAAGGAGATGTGGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAGTAAAGTGGGTCGAACTTaGTCCCTGTGTCCTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KFLRRCGEEIPNRQSRSSKVGRT*SLCPSA Trigger: GGCAGAAGGACACAGGGACAAAGTTCGACCCACTTT...ACTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCACATCTCCTTAGGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCTAAGGAGATGTGGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAGTGCTCACAACGCTCCTTaGGGTAACCAGGCTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KFLRRCGEEIPNRQSRSSAHNAP*GNQAML Trigger: AAGCATAGCCTGGTTACCCAAAGGAGCGTTGTGAGC...ACTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCACATCTCCTTAGGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR TCA 72 bp | ACCTCTATTACTGTGCACGATGCGGTTCCAAGGCTGTaGATTCCCACATCTGTCCCCATTCAAGATTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TSITVHDAVPRL*IPTSVPIQDSS Trigger: AGATGAATCTTGAATGGGGACAGATGTGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAATAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR GCA 72 bp | TATGGAACACAGAACGGACTATGCTACAGAAAGGACTaGATTCTGGTCAGTGCTTGCGCTCTCTCTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: YGTQNGLCYRKD*ILVSACALSNS Trigger: TGAGTTAGAGAGAGCGCAAGCACTGACCAGAATGCAGTCCTTTCTGTAGCATAGTCCGTTCTGTGTTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | CTAGCAGGCGCTACCTCTTTCTTACTGTTTCTTCTTTaGCCCACTGTAAAAGTTCCTAAGGAGATGTGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGATSFLLFLL*PTVKVPKEMWR Trigger: TCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTAAGAAAGAGGTAGCGCCTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CCA 72 bp | CTTCTTTGGCCCACTGTAAAAGTTCCTAAGGAGATGTaGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLWPTVKVPKEM*RRNPKQTVKVK Trigger: CTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCAAAGCAGCCCTGGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTCACCAGGGTGGCCCTATTaGGCAGGGGAAGGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFQSSPGVGQSPVLPGCSPGWPY*AGEGPA Trigger: TGCAGGGCCTTCCCCTGCCCAATAGGGCCACCCTGG...TGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCTCAGGCTCTGGTCTTGTCTGGGGCTCACAACGCTCCTTTGGGTAACCGGAGCCAGTGAGCGCTaGAGGCTGGGCCTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLWSCLGLTTLLWVTGASER*RLGLPH Trigger: GTGGGGGAGGCCCAGCCTCCAGCGCTCACTGGCTCC...GGTTACCCAAAGGAGCGTTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | TACTGCTGGCTGGTAAGACCAGCAACGGAGAGAGGAGAGGGGCTTCTGGGCCAGAAGGACAGGAGCCAGTaGGCGCTGGAGGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YCWLVRPATERGEGLLGQKDRSQ*ALEAGP Trigger: AGGCCCAGCCTCCAGCGCTCACTGGCTCCTGTCCTT...CTGGCCCAGAAGCCCCTCTCCTCTCTCCGTTGCTGGTCTTACCAGCCAGCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGGCAGGGGAAGGCCCTaGAGCAGCGTGCCCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHRRYSSILLPLASVHPAGRGRP*SSVPPS Trigger: ACTAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCC...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGGTGAGCGCTGGAGGCTaGGCCTCCCCCACAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQKRLEALGEALLALGTGVSAGG*ASPTGL Trigger: GAGCCCTGTGGGGGAGGCCCAGCCTCCAGCGCTCAC...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TCGGGGTCCGAGGACCAGAGCTGGGTTTTCATAGTGCCTGTGGCTTATAAGCTCAGGTCCCAGGCGGTGTaGGCCTCTAGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSEDQSWVFIVPVAYKLRSQAV*ASSCCC Trigger: GCAGCAGCAGCTAGAGGCCCACACCGCCTGGGACCT...GAGCTTATAAGCCACAGGCACTATGAAAACCCAGCTCTGGTCCTCGGACCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CAA 72 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTaGGCATTAGGAACTGGGAGATGCTCGGGGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQKRLEALGEAL*ALGTGRCSGSE Trigger: CTCGGACCCCGAGCATCTCCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CAA 72 bp | GGCTCAGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTaGGTTGCCGGGCACTCCTGGAAACACAGCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSGWVLASGGWF*VAGHSWKHSRI Trigger: TATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCAAAGCAGCCCTGGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTCACCTGCATCTTGCGTATaGTCTCTTCCTCGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFQSSPGVGQSPVLPGCSPASCV*SLPRSR Trigger: CCGAGAACGAGGAAGAGATCATACGCAAGATGCAGG...TGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | TCGGGGTCCGAGGACCAGAGCTGGGTTTTCATAGTGCCTGTGGCTTATAAGCTCTGGGCCTCTAGCTGCTaGTGCTCCTCCTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSEDQSWVFIVPVAYKLWASSC*CSSSTC Trigger: GCAGGTGGAGGAGGAGCAGCAGCAGCTAGAGGCCCA...GAGCTTATAAGCCACAGGCACTATGAAAACCCAGCTCTGGTCCTCGGACCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGGGGCGTTGAAAGGCTaGAGCACCAGAACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHRRYSSILLPLASVHPAGALKG*STRTLG Trigger: ACCCAGAGTTCTGGTGCTCCAGCCTTTCAACGCCCC...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | CTACTGTGTTTCCTGTGTGAGGTCACAGGGCCCAGGAAGGTCGACGCACGGGATTGCAAACAGCTCAGGTaGCAGGCACCCTCCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCFLCEVTGPRKVDARDCKQLR*QAPSGK Trigger: TTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCA...ATCCCGTGCGTCGACCTTCCTGGGCCCTGTGACCTCACACAGGAAACACAGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | TCCCGTGATCTTTCCCTGGAAGCGAAGGGGAAGCTGAAGGAGGCTCAGGTTGGGCGCAGCTTCTCCTGGTaGTCCTGCATCTTGCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SRDLSLEAKGKLKEAQVGRSFSW*SCILRM Trigger: CATACGCAAGATGCAGGAGCACCAGGAGAAGCTGCG...CCCAACCTGAGCCTCCTTCAGCTTCCCCTTCGCTTCCAGGGAAAGATCACGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGGACCTCTATTACTGTGCACGATGCGGTTCCAAGGCTGTGAATTCCCATTGTGGGCGATGCGGTaGCACGCTCTGGTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVGPLLLCTMRFQGCEFPLWAMR*HALVRA Trigger: GGCCCTCACCAGAGCGTGGCACCGCATCGCCCACAA...TGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAATAGAGGTCCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCATCAGACGGGTCTGCTTaGAGAGCAAGAAGGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PHRRYSSILLPLASVHPASDGSA*RARRRR Trigger: TCGCCTCCTTCTTGCTCTCCAAGCAGACCCGTCTGA...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CAA 72 bp | CAGGTTGGGTCTTGGCTTCTGGAGGCTGGTTCTTGGTaGCCGGGCACTCCTGGAAACACAGCCGGATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVGSWLLEAGSW*PGTPGNTAGYE Trigger: CTCATATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGCTGGTGAGGGCCATCTaGAACCACTTCATGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQKRLEALGEALLALGTGLVRAI*NHFMTC Trigger: GCAGGTCATGAAGTGGTTTCAGATGGCCCTCACCAG...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCATTTTCCCGTTGTAGGTaGTCCTCAGGGCTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRRYSSILLPLASVHPAFSRCR*SSGLPA Trigger: TGCTGGAAGCCCTGAGGAGCACCTACAACGGGAAAA...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGCCGGTACTCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGGGAACAGCAGAGGGTaGTTAATGATGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PHRRYSSILLPLASVHPAGNSRG*LMMAVT Trigger: GGTGACAGCCATCATTAACCACCCTCTGCTGTTCCC...TGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TCAAGTATCCTATTGCCTCTGGCTTCTGTGCACCCAGCAGATCCTCTCCACCACTCTGCGCACAACCTCTaGGAGACCCAGAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSILLPLASVHPADPLHHSAHNL*ETQSLR Trigger: CCTGAGGCTCTGGGTCTCCCAGAGGTTGTGCGCAGA...GTGGTGGAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAAAGACTGGAGGCACTGGGTGAGGCCCTCTTGGCATTAGGAACTGGGAAGAAGGAGGCGATCTaGAAACAGCTCAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQKRLEALGEALLALGTGKKEAI*KQLRWQ Trigger: CTGCCACCTGAGCTGTTTGCAGATCGCCTCCTTCTT...CCCAGTTCCTAATGCCAAGAGGGCCTCACCCAGTGCCTCCAGTCTTTTCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | CTCAAAGTGGGTCGAACTTTGTCCCTGTGTCCTTCTGCCATACTGCTGGCTGGTCGGGACAGCAGGAGATaGAGCAGGGCAGTCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVGRTLSLCPSAILLAGRDSRR*SRAVFR Trigger: CCTAAAGACTGCCCTGCTGCATCTCCTGCTGTCCCG...ACCAGCCAGCAGTATGGCAGAAGGACACAGGGACAAAGTTCGACCCACTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CAA 72 bp | CAGTTTAACCCCCACCGCCGGTACTCAAGTATCCTATaGCCTCTGGCTTCTGTGCACCCAGCAGATCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QFNPHRRYSSIL*PLASVHPADPL Trigger: GAGAGGATCTGCTGGGTGCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGTTAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TTACTGTGCACGATGCGGTTCCAAGGCTGTGAATTCCCACATCTGTCCCCATTCGGAGCACCAGAACTCTaGGTGGAAGCTGTAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCTMRFQGCEFPHLSPFGAPEL*VEAVGL Trigger: GAGCCCTACAGCTTCCACCCAGAGTTCTGGTGCTCC...GAATGGGGACAGATGTGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGACAGTCAAGGTCAAGTGGAAAAGAAGCTGCTGGGTCCTGGAGTCCAGTCGCAACACCTCGATaGTCAGGAAGAGGACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRQSRSSGKEAAGSWSPVATPR*SGRGPC Trigger: GCATGGTCCTCTTCCTGATCATCGAGGTGTTGCGAC...TGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | TTCTTACTGTTTCTTCTTTGGCCCACTGTAAAAGTTCCTAAGGAGATGTGGCGAGCCTCTAGCTGCTGCTaGTCCTCCTCCACCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLLWPTVKVPKEMWRASSCC*SSSTCR Trigger: GCGGCAGGTGGAGGAGGAGCAGCAGCAGCTAGAGGC...TCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | TTCTTACTGTTTCTTCTTTGGCCCACTGTAAAAGTTCCTAAGGAGATGTGGCGATCCTCCAGGCGTAGCTaGTCCAGGCGCAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLLWPTVKVPKEMWRSSRRS*SRRSFS Trigger: GGAGAAGCTGCGCCTGGAGCAGCTACGCCTGGAGGA...TCGCCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGACAGTCAAGGTCAAGTGGAAAAGAAGCTGCTGGGTCCTGGAGTCCATTCTCCTGGTGCTCCTaGATCTTGCGTATGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNRQSRSSGKEAAGSWSPFSWCS*ILRMIS Trigger: AGAGATCATACGCAAGATGCAGGAGCACCAGGAGAA...TGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| 3UTR CAA 72 bp | GTCTCAGATCCCCAGCACCATCCTGGTAGCTCCTCTTaGCTATGGAACACAGAACGGACTATGCTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDPQHHPGSSS*LWNTERTMLQK Trigger: TTTCTGTAGCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGGGATCTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGACAGTCAAGGTCAAGTGGAAAAGAAGCTGCTGGGTCCTGGAGTCCAGATGAAGTACAGGTCTaGGTCATTACACTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNRQSRSSGKEAAGSWSPDEVQV*VITLDH Trigger: GTGATCCAGTGTAATGACTCAGACCTGTACTTCATC...TGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGCACCATCCTGGTAGCTCCTCTTTGCTATGGAACACAGAACGGACTATGCTGGGAAGTTGTAAGATaGAGTACAGGTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSTILVAPLCYGTQNGLCWEVVR*STGLSH Trigger: ATGACTCAGACCTGTACTTCATCTTACAACTTCCCA...GCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTGAACGACTCATATAGATCCCCAGTGAGCCCAGCCTCTACCACCTTCTTTCGAACTGAAGGGACATaGAGGGAATACTCGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLNDSYRSPVSPASTTFFRTEGT*REYSLM Trigger: CATTAGCGAGTATTCCCTCCATGTCCCTTCAGTTCG...AAAGAAGGTGGTAGAGGCTGGGCTCACTGGGGATCTATATGAGTCGTTCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CCA 90 bp | AAGTTCCTAAGGAGATGTGGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAGTAAGGGTATAAACAAGTaGCACCGTAGTGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFLRRCGEEIPNRQSRSSKGINK*HRSGLS Trigger: GGAGAGGCCACTACGGTGCCACTTGTTTATACCCTT...ACTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCACATCTCCTTAGGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR TCA 90 bp | AAGTTCCTAAGGAGATGTGGCGAAGAAATCCCAAACAGACAGTCAAGGTCAAGTCCTTGTGGTTGCCCATaGAGAAGTGATAGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLRRCGEEIPNRQSRSSPCGCP*RSDRVS Trigger: AGAAACTCTATCACTTCTTCATGGGCAACCACAAGG...ACTTGACCTTGACTGTCTGTTTGGGATTTCTTCGCCACATCTCCTTAGGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 90 bp | AGTGTGGTCCAGAGGTCCCAGGCGGTGTGGGCCTCTAGCTGCTGCTaGTCCTCCTCCACCTGCCGCAGAGCCTCCTTCTCGGCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVVQRSQAVWASSCC*SSSTCRRASFSASR Trigger: TCTGGAGGCCGAGAAGGAGGCTCTGCGGCAGGTGGAGGAGGAGCAGCAGCAGCTAGAGGCCCACACCGCCTGGGACCTCTGGACCACACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | TGCTCCGGATACAGTGCTCGTAGAAGTGGTCCAGGGTGGCCCTATTaGGCAGGGGAAGGCCCTGCAGCAGCGTGCCCCCTAGTCCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: CSGYSARRSGPGWPY*AGEGPAAACPLVPT Trigger: TGTCGGGACTAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCCCAATAGGGCCACCCTGGACCACTTCTACGAGCACTGTATCCGGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | TCCAGCCTCAGGCTCTGGTCTTGTCTGGGGCTCACAACGCTCCTTTGGGTAACCTCCAGGGTGGCCCTATaGGGCAGGGGAAGGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRLWSCLGLTTLLWVTSRVAL*GRGRPC Trigger: GCAGGGCCTTCCCCTGCCCAATAGGGCCACCCTGGA...GGTTACCCAAAGGAGCGTTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | TGCTTCCAAAGCAGCCCTGGTGTGGGACAGTCTCCTGTCCTGCCCGGGTGCTCACCCTCCGGCAAAGCCTaGCCTGTCATCCGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CFQSSPGVGQSPVLPGCSPSGKA*PVIRRN Trigger: GTTCCTCCGGATGACAGGCAAGGCTTTGCCGGAGGG...TGAGCACCCGGGCAGGACAGGAGACTGTCCCACACCAGGGCTGCTTTGGAAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 90 bp | GGACCCGTCAGACGGGTCTGCTTGGAGAGCAAGAAGGAGGCGATCTaGAAACAGCTCAGGTGGCAGGCACCCTCCGGCAAAGCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPVRRVCLESKKEAI*KQLRWQAPSGKALP Trigger: AGGCAAGGCTTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCAGATCGCCTCCTTCTTGCTCTCCAAGCAGACCCGTCTGACGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 90 bp | TCCTCTCCAGGAAGCAGAAGAGGTCCTGCAGGCGTACATCCAGCTTaGTGGCCTTCCAGTCAGAGGCCTGCCGGGACAGCAGGAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPGSRRGPAGVHPA*WPSSQRPAGTAGDA Trigger: TGCATCTCCTGCTGTCCCGGCAGGCCTCTGACTGGAAGGCCAGCAAGCTGGATGTACGCCTGCAGGACCTCTTCTGCTTCCTGGAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 90 bp | AGCTCGTCCTCGTCTCCACCCAGGCACTCCGGGAAGGTGCCCTCCTaGTGGTTCTGTCGCAACACCTCGATGATCAGGAAGAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSPPRHSGKVPS*WFCRNTSMIRKRTM Trigger: CATGGTCCTCTTCCTGATCATCGAGGTGTTGCGACAGAACCATCAGGAGGGCACCTTCCCGGAGTGCCTGGGTGGAGACGAGGACGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 90 bp | CAGCGTCACCTTGATCTGGCCATAGCCCTGACGTTCCAGGGGCGTTaGAAGGCTGGAGCACCAGAACTCTGGGTGGAAGCTGTAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRHLDLAIALTFQGR*KAGAPELWVEAVGL Trigger: GAGCCCTACAGCTTCCACCCAGAGTTCTGGTGCTCCAGCCTTTCAACGCCCCTGGAACGTCAGGGCTATGGCCAGATCAAGGTGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | GTCTGCTTGGAGAGCAAGAAGGAGGCGATCTGCAAACAGCTCAGGTaGCAGGCACCCTCCGGCAAAGCCTTGCCTGTCATCCGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCLESKKEAICKQLR*QAPSGKALPVIRRN Trigger: GTTCCTCCGGATGACAGGCAAGGCTTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCAGATCGCCTCCTTCTTGCTCTCCAAGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | GGAGATGCAGCAGGGCAGTCTTTAGGTGGTAGTCACTCAGCCCACTaGGACCCGTCAGACGGGTCTGCTTGGAGAGCAAGAAGGAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GDAAGQSLGGSHSAH*DPSDGSAWRARRRR Trigger: TCGCCTCCTTCTTGCTCTCCAAGCAGACCCGTCTGACGGGTCCCAGTGGGCTGAGTGACTACCACCTAAAGACTGCCCTGCTGCATCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 90 bp | GCTGCTCCAGGCGCAGCTTCTCCTGGTGCTCCTGCATCTTGCGTATaGTCTCTTCCTCGTTCTCGGGAATCGTGGCATTCTCCCGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAPGAASPGAPASCV*SLPRSRESWHSPVG Trigger: TCCCACGGGAGAATGCCACGATTCCCGAGAACGAGGAAGAGATCATACGCAAGATGCAGGAGCACCAGGAGAAGCTGCGCCTGGAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 90 bp | CGATCTGCAAACAGCTCAGGTGGCAGGCACCCTCCGGCAAAGCCTTaGCTGTCATCCGGAGGAACTCTCGCTCATAGACAGCAAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSANSSGGRHPPAKP*LSSGGTLAHRQQRT Trigger: TGTCCTTTGCTGTCTATGAGCGAGAGTTCCTCCGGATGACAGGCAAGGCTTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCAGATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | TCGTTCTCGGGAATCGTGGCATTCTCCCGTGGGAACAGCAGAGGGTaGTTAATGATGGCTGTCACCACGACCAGACAGACCCGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFSGIVAFSRGNSRG*LMMAVTTTRQTRKS Trigger: ACTCTTCCGGGTCTGTCTGGTCGTGGTGACAGCCATCATTAACCACCCTCTGCTGTTCCCACGGGAGAATGCCACGATTCCCGAGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 90 bp | GTGGCCTCTCCACTTGCCAGTTCTCATACATGCTGCCCACGCCGATaGAGTCCTCCAATTCCATGTCGGTTTTCCCGTTGTAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VASPLASSHTCCPRR*SPPIPCRFSRCRCS Trigger: GGAGCACCTACAACGGGAAAACCGACATGGAATTGGAGGACTTCATCGGCGTGGGCAGCATGTATGAGAACTGGCAAGTGGAGAGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | GCGTATGATCTCTTCCTCGTTCTCGGGAATCGTGGCATTCTCCCGTaGGAACAGCAGAGGGTGGTTAATGATGGCTGTCACCACGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYDLFLVLGNRGILP*EQQRVVNDGCHHDQ Trigger: CTGGTCGTGGTGACAGCCATCATTAACCACCCTCTGCTGTTCCCACGGGAGAATGCCACGATTCCCGAGAACGAGGAAGAGATCATACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | GAGACGACAGCTTTTGGTGGTGGGCTGGCACGAACTGAAGGGACATaGAGGGAATACTCGCTAATGAGCGCCGGGGCGTTCTTAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ETTAFGGGLARTEGT*REYSLMSAGAFLSI Trigger: AATGCTTAAGAACGCCCCGGCGCTCATTAGCGAGTATTCCCTCCATGTCCCTTCAGTTCGTGCCAGCCCACCACCAAAAGCTGTCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | CCCAGCACCATCCTGGTAGCTCCTCTTTGCTATGGAACACAGAACGGACTATGCAGGCGTACATCCAGCTaGCTGGCCTTCCAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSTILVAPLCYGTQNGLCRRTSS*LAFQSE Trigger: CTCTGACTGGAAGGCCAGCAAGCTGGATGTACGCCT...GCATAGTCCGTTCTGTGTTCCATAGCAAAGAGGAGCTACCAGGATGGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | TGCTTGAACGACTCATATAGATCCCCAGTGAGCCCAGCCTCTACCACCTTCTTTAAGGGCCGGAAGAGATaGAGAGGCTCGGCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLNDSYRSPVSPASTTFFKGRKR*RGSALR Trigger: GCGCAGAGCCGAGCCTCTCAATCTCTTCCGGCCCTT...AAAGAAGGTGGTAGAGGCTGGGCTCACTGGGGATCTATATGAGTCGTTCAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | CTCAAAGTGGGTCGAACTTTGTCCCTGTGTCCTTCTGCCATACTGCTGGCTGGTAGGTCAAACTCATACTaGTGGGCGATGCGGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKVGRTLSLCPSAILLAGRSNSY*WAMRCH Trigger: GTGGCACCGCATCGCCCACAAGTATGAGTTTGACCT...ACCAGCCAGCAGTATGGCAGAAGGACACAGGGACAAAGTTCGACCCACTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 90 bp | TGGAGGCTGGGCCTCCCCCACAGGGCTCCTTGGGAAGTTGTAAGATaGAGTACAGGTCTGAGTCATTACACTGGATCACAGGAGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRLGLPHRAPWEVVR*STGLSHYTGSQESR Trigger: TCTTGACTCCTGTGATCCAGTGTAATGACTCAGACCTGTACTTCATCTTACAACTTCCCAAGGAGCCCTGTGGGGGAGGCCCAGCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | ACTGTGGGACCTCTATTACTGTGCACGATGCGGTTCCAAGGCTGTGAATTCCCACCCCCACAGGGCTCCTaGGGAAGTTGTAAGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVGPLLLCTMRFQGCEFPPPQGS*GSCKMK Trigger: CTTCATCTTACAACTTCCCAAGGAGCCCTGTGGGGG...TGGGAATTCACAGCCTTGGAACCGCATCGTGCACAGTAATAGAGGTCCCACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS-3UTR CAA 90 bp | CCAAACAGACAGTCAAGGTCAAGTGGAAAAGAAGCTGCTGGGTCCTGGAGTCCAAGAGCCTCAGGCACCTaGTGGTTGCCCATGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNRQSRSSGKEAAGSWSPRASGT*WLPMKK Trigger: CTTCTTCATGGGCAACCACAAGGTGCCTGAGGCTCT...TGGACTCCAGGACCCAGCAGCTTCTTTTCCACTTGACCTTGACTGTCTGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 90 bp | GGTATGAAGGGTATAAACAAGTGGCACCGTAGTGGCCTCTCCACTTaGCAGTTCTCATACATGCTGCCCACGCCGATGAAGTCCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: GMKGINKWHRSGLST*QFSYMLPTPMKSSN Trigger: ATTGGAGGACTTCATCGGCGTGGGCAGCATGTATGAGAACTGGCAAGTGGAGAGGCCACTACGGTGCCACTTGTTTATACCCTTCATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 90 bp | GAAAGGCATGGACTTCCCCGAGCGGAACTTGATTTTGAGAGACCCTaGGGTGTCCAGCTCTCCAAAGGCAAGGTCAAACTCATACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERHGLPRAELDFERP*GVQLSKGKVKLILV Trigger: CACAAGTATGAGTTTGACCTTGCCTTTGGAGAGCTGGACACCCCAGGGTCTCTCAAAATCAAGTTCCGCTCGGGGAAGTCCATGCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | TGGTCCAGGGTGGCCCTATTGGGCAGGGGAAGGCCCTaGAGCAGCGTGCCCCCTAGTCCCGACAGCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSRVALLGRGRP*SSVPPSPDSSS Trigger: GGACGAGCTGTCGGGACTAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCCCAATAGGGCCACCCTGGACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | TGGCCCTATTGGGCAGGGGAAGGCCCTGCAGCAGCGTaGCCCCTAGTCCCGACAGCTCGTCCTCGTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WPYWAGEGPAAA*PLVPTARPRLH Trigger: GTGGAGACGAGGACGAGCTGTCGGGACTAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCCCAATAGGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | TACAGTGCTCGTAGAAGTGGTCCAGGGTGGCCCTATTaGGCAGGGGAAGGCCCTGCAGCAGCGTGCCCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: YSARRSGPGWPY*AGEGPAAACPL Trigger: TAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCCCAATAGGGCCACCCTGGACCACTTCTACGAGCACTGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CAA 90 bp | CTCCTCTCCAGGAAGCAGAAGAGGTCCTGCAGGCGTACATCCAGCTaGCTGGCCTTCCAGTCAGAGGCCTGCCGGGACAGCAGGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSRKQKRSCRRTSS*LAFQSEACRDSRRC Trigger: GCATCTCCTGCTGTCCCGGCAGGCCTCTGACTGGAAGGCCAGCAAGCTGGATGTACGCCTGCAGGACCTCTTCTGCTTCCTGGAGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 72 bp | CACAGCCTAGAGGGTTCCCGTCAGCCAGCGTCACCTTaGTCTGGCCATAGCCCTGACGTTCCAGGGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSLEGSRQPASP*SGHSPDVPGAL Trigger: CAACGCCCCTGGAACGTCAGGGCTATGGCCAGATCAAGGTGACGCTGGCTGACGGGAACCCTCTAGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CAA 72 bp | AGGAAGCAGAAGAGGTCCTGCAGGCGTACATCCAGCTaGCTGGCCTTCCAGTCAGAGGCCTGCCGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKQKRSCRRTSS*LAFQSEACRDS Trigger: GCTGTCCCGGCAGGCCTCTGACTGGAAGGCCAGCAAGCTGGATGTACGCCTGCAGGACCTCTTCTGCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 72 bp | TCGTCTCCACCCAGGCACTCCGGGAAGGTGCCCTCCTaGTGGTTCTGTCGCAACACCTCGATGATCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPPRHSGKVPS*WFCRNTSMIRK Trigger: CTTCCTGATCATCGAGGTGTTGCGACAGAACCATCAGGAGGGCACCTTCCCGGAGTGCCTGGGTGGAGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | CGCACCCGGCACTGCTGGGCCACGCCCCTCTATTCTTaGCGTAGAGGAGACACAACATATCCTCCTCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTRHCWATPLYS*RRGDTTYPPQA Trigger: AGCTTGAGGAGGATATGTTGTGTCTCCTCTACGGCAAGAATAGAGGGGCGTGGCCCAGCAGTGCCGGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | AACAGCTCAGGTGGCAGGCACCCTCCGGCAAAGCCTTaGCTGTCATCCGGAGGAACTCTCGCTCATAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: NSSGGRHPPAKP*LSSGGTLAHRQ Trigger: CTGTCTATGAGCGAGAGTTCCTCCGGATGACAGGCAAGGCTTTGCCGGAGGGTGCCTGCCACCTGAGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | AGACGGGTCTGCTTGGAGAGCAAGAAGGAGGCGATCTaGAAACAGCTCAGGTGGCAGGCACCCTCCGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRVCLESKKEAI*KQLRWQAPSGK Trigger: TTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCAGATCGCCTCCTTCTTGCTCTCCAAGCAGACCCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | TCCAGCAGGCTCCTCTCCAGGAAGCAGAAGAGGTCCTaGAGGCGTACATCCAGCTTGCTGGCCTTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRLLSRKQKRS*RRTSSLLAFQS Trigger: TGACTGGAAGGCCAGCAAGCTGGATGTACGCCTGCAGGACCTCTTCTGCTTCCTGGAGAGGAGCCTGCTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | GAGAGCAAGAAGGAGGCGATCTGCAAACAGCTCAGGTaGCAGGCACCCTCCGGCAAAGCCTTGCCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ESKKEAICKQLR*QAPSGKALPVI Trigger: GATGACAGGCAAGGCTTTGCCGGAGGGTGCCTGCCACCTGAGCTGTTTGCAGATCGCCTCCTTCTTGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | GCAGGGCAGTCTTTAGGTGGTAGTCACTCAGCCCACTaGGACCCGTCAGACGGGTCTGCTTGGAGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGQSLGGSHSAH*DPSDGSAWRAR Trigger: TCTTGCTCTCCAAGCAGACCCGTCTGACGGGTCCCAGTGGGCTGAGTGACTACCACCTAAAGACTGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | GCTTTTGGTGGTGGGCTGGCACGAACTGAAGGGACATaGAGGGAATACTCGCTAATGAGCGCCGGGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AFGGGLARTEGT*REYSLMSAGAF Trigger: GAACGCCCCGGCGCTCATTAGCGAGTATTCCCTCCATGTCCCTTCAGTTCGTGCCAGCCCACCACCAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CAA 72 bp | GTGTCCAGCTCTCCAAAGGCAAGGTCAAACTCATACTaGTGGGCGATGCGGTGCCACGCTCTGGTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSSPKARSNSY*WAMRCHALVRA Trigger: GGCCCTCACCAGAGCGTGGCACCGCATCGCCCACAAGTATGAGTTTGACCTTGCCTTTGGAGAGCTGGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | TCCAGCTCTCCAAAGGCAAGGTCAAACTCATACTTGTaGGCGATGCGGTGCCACGCTCTGGTGAGGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSPKARSNSYL*AMRCHALVRAI Trigger: GATGGCCCTCACCAGAGCGTGGCACCGCATCGCCCACAAGTATGAGTTTGACCTTGCCTTTGGAGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 72 bp | CGAGACGACAGCTTTTGGTGGTGGGCTGGCACGAACTaGAGGGACATGGAGGGAATACTCGCTAATGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RDDSFWWWAGTN*RDMEGILANER Trigger: GCGCTCATTAGCGAGTATTCCCTCCATGTCCCTTCAGTTCGTGCCAGCCCACCACCAAAAGCTGTCGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | GGAATCGTGGCATTCTCCCGTGGGAACAGCAGAGGGTaGTTAATGATGGCTGTCACCACGACCAGACAGACC | + |
|
Preference number: 6 (lower is better) Translates to: GIVAFSRGNSRG*LMMAVTTTRQT Trigger: GGTCTGTCTGGTCGTGGTGACAGCCATCATTAACCACCCTCTGCTGTTCCCACGGGAGAATGCCACGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 72 bp | AGGTGCCCTCCTGATGGTTCTGTCGCAACACCTCGATaGTCAGGAAGAGGACCATGCAGAGTGTGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RCPPDGSVATPR*SGRGPCRVWSR Trigger: TCTGGACCACACTCTGCATGGTCCTCTTCCTGATCATCGAGGTGTTGCGACAGAACCATCAGGAGGGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | CTCTTCCTCGTTCTCGGGAATCGTGGCATTCTCCCGTaGGAACAGCAGAGGGTGGTTAATGATGGCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFLVLGNRGILP*EQQRVVNDGCH Trigger: GTGACAGCCATCATTAACCACCCTCTGCTGTTCCCACGGGAGAATGCCACGATTCCCGAGAACGAGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CCA 72 bp | GGACTTCCCCGAGCGGAACTTGATTTTGAGAGACCCTaGGGTGTCCAGCTCTCCAAAGGCAAGGTCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GLPRAELDFERP*GVQLSKGKVKL Trigger: GAGTTTGACCTTGCCTTTGGAGAGCTGGACACCCCAGGGTCTCTCAAAATCAAGTTCCGCTCGGGGAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CAA 72 bp | ATGAAAGGCATGGACTTCCCCGAGCGGAACTTGATTTaGAGAGACCCTGGGGTGTCCAGCTCTCCAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MKGMDFPERNLI*RDPGVSSSPKA Trigger: TGCCTTTGGAGAGCTGGACACCCCAGGGTCTCTCAAAATCAAGTTCCGCTCGGGGAAGTCCATGCCTTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS CAA 90 bp | GGAGTCAAGATGAAAGGCATGGACTTCCCCGAGCGGAACTTGATTTaGAGAGACCCTGGGGTGTCCAGCTCTCCAAAGGCAAGGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GVKMKGMDFPERNLI*RDPGVSSSPKARSN Trigger: GTTTGACCTTGCCTTTGGAGAGCTGGACACCCCAGGGTCTCTCAAAATCAAGTTCCGCTCGGGGAAGTCCATGCCTTTCATCTTGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS TCA 72 bp | GGCCTCCCCCACAGGGCTCCTTGGGAAGTTGTAAGATaGAGTACAGGTCTGAGTCATTACACTGGATCACAG | + |
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Preference number: 6 (lower is better) Translates to: GLPHRAPWEVVR*STGLSHYTGSQ Trigger: CTGTGATCCAGTGTAATGACTCAGACCTGTACTTCATCTTACAACTTCCCAAGGAGCCCTGTGGGGGAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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| CDS GCA 72 bp | AGTCCTCCAATTCCATGTCGGTTTTCCCGTTGTAGGTaGTCCTCAGGGCTTCCAGCAGATCATCCACGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SPPIPCRFSRCR*SSGLPADHPRN Trigger: GTTTCGTGGATGATCTGCTGGAAGCCCTGAGGAGCACCTACAACGGGAAAACCGACATGGAATTGGAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095998.7 |
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