RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPKB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038855

Ensembl transcript IDs: ENSMUST00000070181.7

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTaGGAATCCCCAGCAGGCCTCCCAGAACTCGGTTTATCAGACTGT +
Preference number: 1 (lower is better)
Translates to: TWSLPHVPAPVWPGP*ESPAGLPELGLSDC
Trigger: ACAGTCTGATAAACCGAGTTCTGGGAGGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 90 bp CTCCTCCCAAAAGGCACTGATGGGCAAGCGGCCTGGATCAAGGGGTaGGGCCTATACACAGAGGGTTGTCAGAAGACAGGCGCTCTCGAA +
Preference number: 1 (lower is better)
Translates to: LLPKGTDGQAAWIKG*GLYTEGCQKTGALE
Trigger: TTCGAGAGCGCCTGTCTTCTGACAACCCTCTGTGTATAGGCCCCACCCCTTGATCCAGGCCGCTTGCCCATCAGTGCCTTTTGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 90 bp GTGTGTACACGTTGGTCTACCCCATTCCCCTTGGTCCCTAATCAGTaGCTGCTGGCGTGGATCCCAGAGGAGCCTCTGTACATGCCATCC +
Preference number: 1 (lower is better)
Translates to: VCTRWSTPFPLVPNQ*LLAWIPEEPLYMPS
Trigger: GGATGGCATGTACAGAGGCTCCTCTGGGATCCACGCCAGCAGGCACTGATTAGGGACCAAGGGGAATGGGGTAGACCAACGTGTACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 90 bp TGGGGAAAGCAATTGAAGCAATCTTCAGCGTGTGTAAAGCAGAGCTaGCCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: WGKQLKQSSACVKQS*PPRHLVAQEQEGPR
Trigger: CCTGGGGCCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACACGCTGAAGATTGCTTCAATTGCTTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 90 bp TGGGAATCCCCAGCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTaGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACAG +
Preference number: 1 (lower is better)
Translates to: WESPAGLPELGLSDC*RFWEIPSELCPSPQ
Trigger: CTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGCTGGGGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 90 bp AGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTaGGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCTCTGGCAG +
Preference number: 1 (lower is better)
Translates to: RTRFIRLLEVLGNSI*ALPIPTEGRRGLWQ
Trigger: CTGCCAGAGGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTaGCCATCCCCACAGAAGGAAGGAGGGGCCTCTGGCAGGATAGAA +
Preference number: 1 (lower is better)
Translates to: GLSDCWRFWEIPSEL*PSPQKEGGASGRIE
Trigger: TTCTATCCTGCCAGAGGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 90 bp CCAACTAAGGAAGACACCCTTGGCAACAGACTAACCCTAGAAAGATaGCTCTCCACACCGCTTTCCCACTCACAACACACCCAGCACAAA +
Preference number: 1 (lower is better)
Translates to: PTKEDTLGNRLTLER*LSTPLSHSQHTQHK
Trigger: TTTGTGCTGGGTGTGTTGTGAGTGGGAAAGCGGTGTGGAGAGGCATCTTTCTAGGGTTAGTCTGTTGCCAAGGGTGTCTTCCTTAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 90 bp ACATGGAGAAACACCGGTCTAAGTCCTTCAAGCTGGGAGAGTGAGTaGTTTCAAGGGAAACTCAGGGATCATTCCAGGAAGCCAGAATCC +
Preference number: 1 (lower is better)
Translates to: TWRNTGLSPSSWESE*FQGKLRDHSRKPES
Trigger: GGATTCTGGCTTCCTGGAATGATCCCTGAGTTTCCCTTGAAATCACTCACTCTCCCAGCTTGAAGGACTTAGACCGGTGTTTCTCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 90 bp CAGAAGGAAGGAGGGGCCTCTGGCAGGATAGAAGTGAGAATGGTTTaGGGCAGAGAGTGGGTACTAGCATACAAATACAAACCCCAACTA +
Preference number: 1 (lower is better)
Translates to: QKEGGASGRIEVRMV*GREWVLAYKYKPQL
Trigger: TAGTTGGGGTTTGTATTTGTATGCTAGTACCCACTCTCTGCCTCAAACCATTCTCACTTCTATCCTGCCAGAGGCCCCTCCTTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 90 bp CATAGCTGTAGACTCTTGGAATTAATGATACCCCTTCCCAGCAAATaGCCAATGTACAGACCACGAGGTCACCTCAAGCCCTCTAGCAAC +
Preference number: 1 (lower is better)
Translates to: HSCRLLELMIPLPSK*PMYRPRGHLKPSSN
Trigger: GTTGCTAGAGGGCTTGAGGTGACCTCGTGGTCTGTACATTGGCCATTTGCTGGGAAGGGGTATCATTAATTCCAAGAGTCTACAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 90 bp AATTACATGGAGAAACACCGGTCTAAGTCCTTCAAGCTGGGAGAGTaGGTGATTTCAAGGGAAACTCAGGGATCATTCCAGGAAGCCAGA +
Preference number: 1 (lower is better)
Translates to: NYMEKHRSKSFKLGE*VISRETQGSFQEAR
Trigger: TCTGGCTTCCTGGAATGATCCCTGAGTTTCCCTTGAAATCACTCACTCTCCCAGCTTGAAGGACTTAGACCGGTGTTTCTCCATGTAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 90 bp GTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCTGAAGTaGCGAATAACAATGATCTATCTTCCCATAGCCCTTCAAGAAGCT +
Preference number: 1 (lower is better)
Translates to: VHSFQSERLLASELK*RITMIYLPIALQEA
Trigger: AGCTTCTTGAAGGGCTATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 90 bp CTGGTCCCTAGCATTTTTGTTGTTGTTGTTGTTTATAGTGTGGTTTaGTTTAGCAAACATTTCTCTGAGACAGCAGGAGGGAACTTTTGG +
Preference number: 1 (lower is better)
Translates to: LVPSIFVVVVVYSVV*FSKHFSETAGGNFW
Trigger: CCAAAAGTTCCCTCCTGCTGTCTCAGAGAAATGTTTGCTAAAGCAAACCACACTATAAACAACAACAACAACAAAAATGCTAGGGACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 90 bp TTAAACTGGTCCCTAGCATTTTTGTTGTTGTTGTTGTTTATAGTGTaGTTTGCTTTAGCAAACATTTCTCTGAGACAGCAGGAGGGAACT +
Preference number: 1 (lower is better)
Translates to: LNWSLAFLLLLLFIV*FALANISLRQQEGT
Trigger: AGTTCCCTCCTGCTGTCTCAGAGAAATGTTTGCTAAAGCAAACCACACTATAAACAACAACAACAACAAAAATGCTAGGGACCAGTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR GCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCGCTGGCTCTCAGAACTaGTGCCTAGTGATTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQAAGSQN*CLVIAP
Trigger: GGGAGCAATCACTAGGCAGCAGTTCTGAGAGCCAGC...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR GCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCTTGGTCCCTAATCAGTaGCTGCTGGCGTGGATCCCA +
Preference number: 2 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQALVPNQ*LLAWIP
Trigger: TGGGATCCACGCCAGCAGGCACTGATTAGGGACCAA...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 90 bp TACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTaGGGAATCCCCAGCAGGCCTCCCAGAACTCGGTTTATCAGACTG +
Preference number: 2 (lower is better)
Translates to: YMEPAPCPSTCVAGT*GIPSRPPRTRFIRL
Trigger: CAGTCTGATAAACCGAGTTCTGGGAGGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGTATTGTGCCCAGCTCTaGACCTTCCCACAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLYCAQL*TFPQQA
Trigger: TGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATA...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCGACTGTTGGAGGTTCTaGGAAATTCCATCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQADCWRF*EIPSEL
Trigger: GAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTC...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR GCA 90 bp TTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCCTGCTGCCTAGTGATTaGTCCCTGGAGGTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: FWEIPSELCPSPQKEGGALLPSD*SLEVGV
Trigger: CACACCAACCTCCAGGGAGCAATCACTAGGCAGCAG...GGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR GCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGGGCTCTCAGAACTGCTaGCTAGTGATTGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGGSQNC*LVIAPW
Trigger: CCAGGGAGCAATCACTAGGCAGCAGTTCTGAGAGCC...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCTTCTCTTCGAGAAGGTaGTTCTATTTAGAGAGCATG +
Preference number: 2 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQAFSSRR*FYLESM
Trigger: CATGCTCTCTAAATAGAACCACCTTCTCGAAGAGAA...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGAGTGTAACAGGATGTaGGGCCTAGCTTTGTGTAAT +
Preference number: 2 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLECNRM*GLALCN
Trigger: ATTACACAAAGCTAGGCCCCACATCCTGTTACACTC...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp GGAATGGCCCCAGAAGGCAGGCCCCAGAGCTTAGGAAGAACAGCCCAGCCTTTCGAAGTGAGAATGGTTTaGGGCAGAGAGTGGGTACTA +
Preference number: 2 (lower is better)
Translates to: GMAPEGRPQSLGRTAQPFEVRMV*GREWVL
Trigger: TAGTACCCACTCTCTGCCTCAAACCATTCTCACTTC...GAAAGGCTGGGCTGTTCTTCCTAAGCTCTGGGGCCTGCCTTCTGGGGCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGTTTATCAGACTGTTaGAGGTTCTGGGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLGLSDC*RFWEIP
Trigger: TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR GCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGATTCCATCTGAGCTCTaGCCATCCCCACAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGIPSEL*PSPQKE
Trigger: TTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAAT...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCAGGAGAGGCTCAGAGCTaGATGCCTGGTTGCTACTGC +
Preference number: 2 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPGEAQS*MPGCYC
Trigger: GCAGTAGCAACCAGGCATCCAGCTCTGAGCCTCTCC...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACGCAGAATGTCCTCTCTaGATTCACGGGCAATGCTCC +
Preference number: 2 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHAECPL*IHGQCS
Trigger: GGAGCATTGCCCGTGAATTCAGAGAGGACATTCTGC...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 90 bp TCCCATAGCCCTTCAAGAAGCTCAGAACTCGAGCAAGAGGAAGGCTaGGGCAGCCCTCTGAACAACTCTGGCAACTACCGAATTACATGG +
Preference number: 2 (lower is better)
Translates to: SHSPSRSSELEQEEG*GSPLNNSGNYRITW
Trigger: CCATGTAATTCGGTAGTTGCCAGAGTTGTTCAGAGGGCTGCCCAAGCCTTCCTCTTGCTCGAGTTCTGAGCTTCTTGAAGGGCTATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAAAGTGTCCCTGGGAGCTaGGACTTCCCACTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKSVPGS*DFPLEE
Trigger: CTCCTCCAGTGGGAAGTCCCAGCTCCCAGGGACACT...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACTCTAGCAACTACAGCTaGAGAGGCTCAGAGCTGGAT +
Preference number: 2 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHSSNYS*RGSELD
Trigger: ATCCAGCTCTGAGCCTCTCCAGCTGTAGTTGCTAGA...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCAGGAAGGAGGGGCCTCTaGCAGGATAGAAGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPGRRGL*QDRSEN
Trigger: ATTCTCACTTCTATCCTGCCAGAGGCCCCTCCTTCC...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACTTCAAGCTGGGAGAGTaGGTGATTTCAAGGGAAACT +
Preference number: 2 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHFKLGE*VISRET
Trigger: AGTTTCCCTTGAAATCACTCACTCTCCCAGCTTGAA...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCCCAGATGGAAGGGTaGCGTTCTTTAAAAATGGAG +
Preference number: 2 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPSQMEG*RSLKME
Trigger: CTCCATTTTTAAAGAACGTCACCCTTCCATCTGGGA...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCGGCAAGGTGGGGCCCTaGTTTAGCATCTCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSGKVGP*FSISRE
Trigger: TTCTCTAGAGATGCTAAATCAGGGCCCCACCTTGCC...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 90 bp GAGACAGCAGGAGGGAACTTTTGGCCAGATCATAGCTGTAGACTCTaGGAATTAATGATACCCCTTCCCAGCAAATGGCCAATGTACAGA +
Preference number: 2 (lower is better)
Translates to: ETAGGNFWPDHSCRL*ELMIPLPSKWPMYR
Trigger: TCTGTACATTGGCCATTTGCTGGGAAGGGGTATCATTAATTCCAAGAGTCTACAGCTATGATCTGGCCAAAAGTTCCCTCCTGCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGCCACTCAGTGTCCCTaGGAGCTGGGACTTCCCACT +
Preference number: 2 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVATQCP*ELGLPT
Trigger: AGTGGGAAGTCCCAGCTCCCAGGGACACTGAGTGGC...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCCTCACCCACCCAGCATaGAGGGGAAGCACATATGCC +
Preference number: 2 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVLTHPA*RGSTYA
Trigger: GGCATATGTGCTTCCCCTTCATGCTGGGTGGGTGAG...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR TCA 90 bp AAAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGAGCTGGGAGAGTGAGTaGTTTCAAGGGAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: KVIQVVHSFQSERLLASESWESE*FQGKLR
Trigger: CCTGAGTTTCCCTTGAAATCACTCACTCTCCCAGCT...CTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTaGCCGGGACCTTGGGAATCCCCAGCAGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: GTWSLPHVPAPV*PGPWESPAGLP
Trigger: TGGGAGGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GAAGAATTAGGGGAGGAGAGAGGCGACAGGCAGAGGTaGCGGGCAAAGTGGCACGGCTATGCACGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: EELGEERGDRQR*RAKWHGYARWR
Trigger: CCGCCACCGTGCATAGCCGTGCCACTTTGCCCGCCACCTCTGCCTGTCGCCTCTCTCCTCCCCTAATTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp CTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTaGGAATCCCCAGCAGGCCTCCCAGAACTCGGTTTA +
Preference number: 3 (lower is better)
Translates to: LPHVPAPVWPGP*ESPAGLPELGL
Trigger: TAAACCGAGTTCTGGGAGGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp TCCCGCCCCCACCAACTGTCACTCACCCACCCAGCATaGAGGGGAAGCACATATGCCACGTGGGCCAATAGC +
Preference number: 3 (lower is better)
Translates to: SRPHQLSLTHPA*RGSTYATWANS
Trigger: GCTATTGGCCCACGTGGCATATGTGCTTCCCCTTCATGCTGGGTGGGTGAGTGACAGTTGGTGGGGGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CAA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCAGAAGTGAGAATGGTTaGAGGCAGAGAGTGGGTACT +
Preference number: 3 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQARSENG*RQRVGT
Trigger: AGTACCCACTCTCTGCCTCAAACCATTCTCACTTCT...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 72 bp GGTCTACCCCATTCCCCTTGGTCCCTAATCAGTGCCTaGTGGCGTGGATCCCAGAGGAGCCTCTGTACATGC +
Preference number: 3 (lower is better)
Translates to: GLPHSPWSLISA*WRGSQRSLCTC
Trigger: GCATGTACAGAGGCTCCTCTGGGATCCACGCCAGCAGGCACTGATTAGGGACCAAGGGGAATGGGGTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 72 bp AACAGTCCCAAGAGGAAAGGAGTTCAGAGGAGAGCCTaGCTGTCAGGGTGCAGGGAGGGTCCTCTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: NSPKRKGVQRRA*LSGCREGPLLP
Trigger: TGGGAGGAGAGGACCCTCCCTGCACCCTGACAGGCAGGCTCTCCTCTGAACTCCTTTCCTCTTGGGACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp TCCCTAAGGCCTAGTGATTGCTCTCCCGGGTGTGGCTaGCTCTCAGAACTGCTGCCTAGTGATTGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: SLRPSDCSPGCG*LSELLPSDCSL
Trigger: CAGGGAGCAATCACTAGGCAGCAGTTCTGAGAGCCAGCCACACCCGGGAGAGCAATCACTAGGCCTTAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp CCACGAGGTCACCTCAAGCCCTCTAGCAACTACAGCTaGAGAGGCTCAGAGCTGGATGCCTGGTTGCTACTG +
Preference number: 3 (lower is better)
Translates to: PRGHLKPSSNYS*RGSELDAWLLL
Trigger: CAGTAGCAACCAGGCATCCAGCTCTGAGCCTCTCCAGCTGTAGTTGCTAGAGGGCTTGAGGTGACCTCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GGAGCTGCTCTCCATACTCCTCCTAGGCTGGCAAGGTaGGGCCCTGATTTAGCATCTCTAGAGAAGCCACTC +
Preference number: 3 (lower is better)
Translates to: GAALHTPPRLAR*GPDLASLEKPL
Trigger: GAGTGGCTTCTCTAGAGATGCTAAATCAGGGCCCCACCTTGCCAGCCTAGGAGGAGTATGGAGAGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCTCTaGCAGGATAGAAGTGAGAATGGTTTGAGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: ALPIPTEGRRGL*QDRSENGLRQR
Trigger: TCTCTGCCTCAAACCATTCTCACTTCTATCCTGCCAGAGGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 72 bp GCCTGCTGGCGTGGATCCCAGAGGAGCCTCTGTACATaGCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGAT +
Preference number: 3 (lower is better)
Translates to: ACWRGSQRSLCT*HPESLSKRGGD
Trigger: ATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGCTCCTCTGGGATCCACGCCAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GCATCTCTAGAGAAGCCACTCAGTGTCCCTGGGAGCTaGGACTTCCCACTGGAGGAGACTTTGCTCATAATC +
Preference number: 3 (lower is better)
Translates to: ASLEKPLSVPGS*DFPLEETLLII
Trigger: GATTATGAGCAAAGTCTCCTCCAGTGGGAAGTCCCAGCTCCCAGGGACACTGAGTGGCTTCTCTAGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp CCAGCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTaGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: PAGLPELGLSDC*RFWEIPSELCP
Trigger: TGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp TTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTaGGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: FIRLLEVLGNSI*ALPIPTEGRRG
Trigger: GCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp CAGGCGCTCTCGAAGCTAAATACAGCCAGCCAAAGGTaGACAGCATCTGTCTTGAGGCTATACCTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: QALSKLNTASQR*TASVLRLYLLR
Trigger: CCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTTTGGCTGGCTGTATTTAGCTTCGAGAGCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR GCA 72 bp GAAGACACCCTTGGCAACAGACTAACCCTAGAAAGATaGCTCTCCACACCGCTTTCCCACTCACAACACACC +
Preference number: 3 (lower is better)
Translates to: EDTLGNRLTLER*LSTPLSHSQHT
Trigger: GGTGTGTTGTGAGTGGGAAAGCGGTGTGGAGAGGCATCTTTCTAGGGTTAGTCTGTTGCCAAGGGTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp CTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTaGGAAATTCCATCTGAGCTCTGCCCATCCCCACAG +
Preference number: 3 (lower is better)
Translates to: LPELGLSDCWRF*EIPSELCPSPQ
Trigger: CTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp CAATTGAAGCAATCTTCAGCGTGTGTAAAGCAGAGCTaGCCACCAAGACATCTGGTGGCCCAAGAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QLKQSSACVKQS*PPRHLVAQEQE
Trigger: CTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACACGCTGAAGATTGCTTCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp TTCTGGACCCGTGCCGACTCTGAGTGTAACAGGATGTaGGGCCTAGCTTTGTGTAATTCTCTTCGAGAAGGT +
Preference number: 3 (lower is better)
Translates to: FWTRADSECNRM*GLALCNSLREG
Trigger: ACCTTCTCGAAGAGAATTACACAAAGCTAGGCCCCACATCCTGTTACACTCAGAGTCGGCACGGGTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp AGCCCTCTGAACAACTCTGGCAACTACCGAATTACATaGAGAAACACCGGTCTAAGTCCTTCAAGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: SPLNNSGNYRIT*RNTGLSPSSWE
Trigger: CTCCCAGCTTGAAGGACTTAGACCGGTGTTTCTCCATGTAATTCGGTAGTTGCCAGAGTTGTTCAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp AGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTaGGTCCCTCCTCCCGCCCCCACCAACTGTCACTCA +
Preference number: 3 (lower is better)
Translates to: SSFLNICTYTSS*VPPPAPTNCHS
Trigger: TGAGTGACAGTTGGTGGGGGCGGGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp AGACTCTTGGAATTAATGATACCCCTTCCCAGCAAATaGCCAATGTACAGACCACGAGGTCACCTCAAGCCC +
Preference number: 3 (lower is better)
Translates to: RLLELMIPLPSK*PMYRPRGHLKP
Trigger: GGGCTTGAGGTGACCTCGTGGTCTGTACATTGGCCATTTGCTGGGAAGGGGTATCATTAATTCCAAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp AACACCGGTCTAAGTCCTTCAAGCTGGGAGAGTGAGTaGTTTCAAGGGAAACTCAGGGATCATTCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: NTGLSPSSWESE*FQGKLRDHSRK
Trigger: CTTCCTGGAATGATCCCTGAGTTTCCCTTGAAATCACTCACTCTCCCAGCTTGAAGGACTTAGACCGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR TCA 72 bp GGAGGGGCCTCTGGCAGGATAGAAGTGAGAATGGTTTaGGGCAGAGAGTGGGTACTAGCATACAAATACAAA +
Preference number: 3 (lower is better)
Translates to: GGASGRIEVRMV*GREWVLAYKYK
Trigger: TTTGTATTTGTATGCTAGTACCCACTCTCTGCCTCAAACCATTCTCACTTCTATCCTGCCAGAGGCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR-3UTR CAA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATGCAGAACCCCAGAGATaGTATTTCCAACTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: EATCFRAEVANNNDLSSHAEPQR*YFQLPE
Trigger: TTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGC...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp TTTCAATCAGAGAGGCTACTTGCTTCAGAGCTGAAGTaGCGAATAACAATGATCTATCTTCCCATAGCCCTT +
Preference number: 3 (lower is better)
Translates to: FQSERLLASELK*RITMIYLPIAL
Trigger: AAGGGCTATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTCTCTGATTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CCA 72 bp GGTCTCGGCATGTTTTGTTCTTTACATACATTAAACTaGTCCCTAGCATTTTTGTTGTTGTTGTTGTTTATA +
Preference number: 3 (lower is better)
Translates to: GLGMFCSLHTLN*SLAFLLLLLFI
Trigger: TATAAACAACAACAACAACAAAAATGCTAGGGACCAGTTTAATGTATGTAAAGAACAAAACATGCCGAGACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCCTCCTCTGGCCCAGGTaGGGAGAGGATGCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQALLWPR*GEDAGR
Trigger: GCGGCCCGCATCCTCTCCCCACCTGGGCCAGAGGAG...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCCACACCCCTAGCCCCTaGCTGTGCTGCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQAHTPSP*LCCLAA
Trigger: GGCAGCCAGGCAGCACAGCCAGGGGCTAGGGGTGTG...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCGGGTGGCTGTCGAACTaGTGGTTTCCCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQAGWLSN*WFPATA
Trigger: TGCAGTGGCGGGAAACCATCAGTTCGACAGCCACCC...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GGAATGGCCCCAGAAGGCAGGCCCCAGAGCTTAGGAAGAACAGCCCAGCCTTTCGGCGGCCAGCCCAACTaGGACTGCCCACGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GMAPEGRPQSLGRTAQPFGGQPN*DCPRHC
Trigger: GCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCC...GAAAGGCTGGGCTGTTCTTCCTAAGCTCTGGGGCCTGCCTTCTGGGGCCATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCCAGTTTCCATGGGTGTaGGTGAGCCACAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQAQFPWV*VSHSGD
Trigger: GTCCCCGCTGTGGCTCACCCACACCCATGGAAACTG...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGAGCCACAGCGGGGACTaGCCGGGGTACCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLSHSGD*PGYLFP
Trigger: TGGAAAGAGGTACCCCGGCCAGTCCCCGCTGTGGCT...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGAATGGCCCCAGAAGGCAGGCCCCAGAGCTTAGGAAGAACAGCCCAGCCTTTCGACTGCCCACGCCACTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GMAPEGRPQSLGRTAQPFDCPRH*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTC...GAAAGGCTGGGCTGTTCTTCCTAAGCTCTGGGGCCTGCCTTCTGGGGCCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp TGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGGAATCCCCAGCAGGCCAATGGCAGAGCTCTGTaGCTGGATTTGCGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: CPMSQHLCGRDLGNPQQANGRAL*LDLRLE
Trigger: TTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATT...GGCCTGCTGGGGATTCCCAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGGAGGGCTCTGAGCTTTaGGCAGTCACAGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLEGSEL*AVTALS
Trigger: AGAGAGGGCTGTGACTGCCCAAAGCTCAGAGCCCTC...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGGACAGGCTCTGGGGTTaGGCCGGTCTCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGDRLWG*AGLLAQ
Trigger: CTGGGCAAGGAGACCGGCTCAACCCCAGAGCCTGTC...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGAATGGCCCCAGAAGGCAGGCCCCAGAGCTTAGGAAGAACAGCCCAGCCTTTCGGATGGCTGGGATGTTaGTGGGGCTGCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GMAPEGRPQSLGRTAQPFGWLGC*WGCRPL
Trigger: AAGAGGCCTGCAGCCCCAGCAACATCCCAGCCATCC...GAAAGGCTGGGCTGTTCTTCCTAAGCTCTGGGGCCTGCCTTCTGGGGCCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATCCTGGCTGTGCTGCCTaGCTGCCCCCAAGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADPGCAA*LPPSKP
Trigger: GGGCTTGCTTGGGGGCAGCCAGGCAGCACAGCCAGG...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACCTGTCCAGGGTCTGCTaGGGCCCTCGCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHLSRVC*GPRIPG
Trigger: CCCAGGGATGCGAGGGCCCCAGCAGACCCTGGACAG...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 72 bp CGCCAGGTGTGTACACGTTGGTCTACCCCATTCCCCTaGGTCCCTAATCAGTGCCTGCTGGCGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: RQVCTRWSTPFP*VPNQCLLAWIP
Trigger: TGGGATCCACGCCAGCAGGCACTGATTAGGGACCAAGGGGAATGGGGTAGACCAACGTGTACACACCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp TTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCAGTTGGGGTCCAGCGTaGGCTCAGGGTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: FWEIPSELCPSPQKEGGASWGPA*AQGHWR
Trigger: TCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACT...GGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTCCCGGTTCCCCTCCTaGCAGGGGACGTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADSRFPS*QGTSCC
Trigger: ACAACACGACGTCCCCTGGCAGGAGGGGAACCGGGA...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GGTAGGTACATGGAGCCTGCCCCATGTCCCAGCACCTGTGTGGCCGGGACCTTGCTTCCTCCAAGGCACTaGGCCAAACTATGGAACTCT +
Preference number: 4 (lower is better)
Translates to: GRYMEPAPCPSTCVAGTLLPPRH*AKLWNS
Trigger: AGAGTTCCATAGTTTGGCCCAGTGCCTTGGAGGAAG...CAAGGTCCCGGCCACACAGGTGCTGGGACATGGGGCAGGCTCCATGTACCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGGTCCCCATGGTAGGCTaGCACGAAGGGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGVPMVG*HEGSQH
Trigger: GTGCTGAGACCCTTCGTGCCAGCCTACCATGGGGAC...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATCGGTCCAGGCAGCGCTaGTCAGACTCACAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADRSRQR*SDSQCF
Trigger: GAAGCACTGTGAGTCTGAGCAGCGCTGCCTGGACCG...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGCCTCTGGGCCTCCTCTaGCCCAGGTGGGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQPLGLL*PRWGED
Trigger: ATCCTCTCCCCACCTGGGCCAGAGGAGGCCCAGAGG...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GATGCAGAACCCCAGAGATTGTATTTCCAACTCCCAGAAATCAGGTCCCTGTCCCCCCGTCTCTCCATCTaGGCCTCCCAGGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: DAEPQRLYFQLPEIRSLSPRLSI*ASQGRM
Trigger: CATGCGCCCCTGGGAGGCCCAGATGGAGAGACGGGG...GGACAGGGACCTGATTTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGCATC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGGGGCCCTCGCATCCCTaGGATCCTATTTCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGGPSHP*DPISSL
Trigger: AAGGGAGGAAATAGGATCCCAGGGATGCGAGGGCCC...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCTGCGCTCAGGGTCACTaGAGATGTCCTCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FWEIPSELCPSPQKEGGACAQGH*RCPPPS
Trigger: ACTCGGAGGAGGACATCTCCAGTGACCCTGAGCGCA...GGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GATGCAGAACCCCAGAGATTGTATTTCCAACTCCCAGAAATCAGGTCCCTGTCCTTCCATGGGTGTGGGTaGGCCACAGCGGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: DAEPQRLYFQLPEIRSLSFHGCG*ATAGTG
Trigger: GCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAA...GGACAGGGACCTGATTTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATGGTATGCAAAAAGGCTaGGTTGGGGTCCAGCGTGCG +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADGMQKG*VGVQRA
Trigger: CGCACGCTGGACCCCAACTCAGCCTTTTTGCATACC...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGGAGGTTGTCCAGCCCTaGGAGGTAGCCATCCTCCCG +
Preference number: 4 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQEVVQP*EVAILP
Trigger: CGGGAGGATGGCTACCTCTCAGGGCTGGACAACCTC...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATGTTGCTGCTGCTGCTaGCACCTCCGCTACCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPCCCCC*HLRYRC
Trigger: GCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACA...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATCCCAAGCAAGCCCAGTaGTGGAGAGCCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADPKQAQ*WRAFSL
Trigger: GAGAGAGAAGGCTCTCCAGCACTGGGCTTGCTTGGG...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAACGCCTCTCCCAGGGCTaGAGACGCTGCCGGGACTCA +
Preference number: 4 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKRLSQG*RRCRDS
Trigger: TGAGTCCCGGCAGCGTCTTCAGCCCTGGGAGAGGCG...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGTGCTGCTGTTGCTGCTaGTGCTGCCACCTCCGCTAC +
Preference number: 4 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQCCCCC*CCHLRY
Trigger: GTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCA...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGTGCTGGTCCAGGGTATaGAAAAAGGCTGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGCWSRV*KKAELG
Trigger: CCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCA...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAAACGCCACCTCCAAGCCCCTATGTAGGAGGCCGGGGAAGTAAAGATCTAGAATTCGGGGCGCTTGAATaGCAGAGCTCTGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ETPPPSPYVGGRGSKDLEFGALE*QSSVPG
Trigger: TCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAA...TTCTAGATCTTTACTTCCCCGGCCTCCTACATAGGGGCTTGGAGGTGGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAAACGCCACCTCCAAGCCCCTATGTAGGAGGCCGGGGAAGTAAAGATCTAGAAGCAAAAAGGCTGAGTTaGGGTCCAGCGTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ETPPPSPYVGGRGSKDLEAKRLS*GPACAQ
Trigger: CTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGC...TTCTAGATCTTTACTTCCCCGGCCTCCTACATAGGGGCTTGGAGGTGGCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGCTGCCAATGACCTCGTaGCACTTGAAGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGLPMTS*HLKKGE
Trigger: CTCTCCCTTCTTCAAGTGCCACGAGGTCATTGGCAG...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAATGCTACTATTCAGCCTaGGCCGGCCGCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKCYYSA*AGRCAS
Trigger: GCTGGCGCAGCGGCCGGCGCAGGCTGAATAGTAGCA...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAACAGCCCAACTGGGACTaGCCACGCCACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKQPNWD*PRHCCC
Trigger: GCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTG...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCTTGAGCCGGTCTCCTTaGCCAGAAACTGCCCCCGTC +
Preference number: 4 (lower is better)
Translates to: GLSDCWRFWEIPSELCPSLSRSP*PETAPV
Trigger: GACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAA...GGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATCCTAGCCCCTGGCTGTaGTGCCTGGCTGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EATCFRAEVANNNDLSSHPSPWL*CLAAPK
Trigger: CTTGGGGGCAGCCAGGCAGCACAGCCAGGGGCTAGG...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGCTCCCTGCATGTCCTaGCAGCTGGATCCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPAPCMS*QLDPGV
Trigger: TACCCCTGGATCCAGCTGGCAGGACATGCAGGGAGC...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 72 bp CCTTCAAGAAGCTCAGAACTCGAGCAAGAGGAAGGCTaGGGCAGCCCTCTGAACAACTCTGGCAACTACCGA +
Preference number: 4 (lower is better)
Translates to: PSRSSELEQEEG*GSPLNNSGNYR
Trigger: TCGGTAGTTGCCAGAGTTGTTCAGAGGGCTGCCCAAGCCTTCCTCTTGCTCGAGTTCTGAGCTTCTTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 72 bp CAGCACAAAGCACTGCCTAGCACTGTCTGGAGGCTCTaGCTAACCGGCCCCCAGTTATGGTATCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: QHKALPSTVWRL*LTGPQLWYLST
Trigger: TGTGCTAAGATACCATAACTGGGGGCCGGTTAGCAAGAGCCTCCAGACAGTGCTAGGCAGTGCTTTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCATCGAGGGGTGTGTGCTaGGTCTGCTTCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPSRGVC*VCFSFQ
Trigger: CTGGAAGGAGAAGCAGACTCAGCACACACCCCTCGA...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTTCCGGGCCTTGGTaGGTTCTTCCTCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPSSGPW*VLPPGM
Trigger: CATACCTGGAGGAAGAACTCACCAAGGCCCGGAAGA...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCACTCTGTGCCTGGATTTaGGCCTCGAACATGCCCACT +
Preference number: 4 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPLCAWI*ASNMPT
Trigger: AGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAG...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTGCTCAGACTCACAGTaGTTCTTAAGGATGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADCSDSQ*FLRMRP
Trigger: TGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAGCA...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACAAGCAAGCCCAGTGCTaGAGAGCCTTCTCTCTCACT +
Preference number: 4 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHKQAQC*RAFSLT
Trigger: AGTGAGAGAGAAGGCTCTCCAGCACTGGGCTTGCTT...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGCCTTGTCCTTCTaGTCTGGGGGCATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPEALSF*SGGISW
Trigger: CCAAGAGATGCCCCCAGACCAGAAGGACAAGGCCTC...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACTTGGTCACAGCTCGCTaGGCTTTCTCCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHLVTAR*AFSSSV
Trigger: CACTGAAGAGGAGAAAGCCCAGCGAGCTGTGACCAA...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATCCAGGGTCGCTCGAATaGCCTTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EATCFRAEVANNNDLSSHPGSLE*PSAGPG
Trigger: ACCGGGACCGGCTGAAGGCCATTCGAGCGACCCTGG...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCACACAGCCTGTCTCCATaGGGGCAGAATCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPHSLSP*GQNHVQ
Trigger: CTGGACATGATTCTGCCCTCATGGAGACAGGCTGTG...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCACATTTGCAGCTGCCTTaGAGCTCCCTGCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPHLQLP*SSLHVL
Trigger: CAGGACATGCAGGGAGCTTCAAGGCAGCTGCAAATG...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCTGCCTTGAAGCTCCCTaGATGTCCTGCCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GLSDCWRFWEIPSELCPSCLEAP*MSCQLD
Trigger: ATCCAGCTGGCAGGACATGCAGGGAGCTTCAAGGCA...GGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGACAAAGGGGGACCACTaGACCATGTTCTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGTKGDH*TMFFIF
Trigger: AAAGATAAAGAACATGGTGCAGTGGTCCCCCTTTGT...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACATCCACACCTTGGCTTaGTCCTTCTTGTCATGGATG +
Preference number: 4 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHIHTLA*SFLSWM
Trigger: CATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGAT...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCTCTGAGTCCCTAACCTaGTCGGGCTGGCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSSESLT*SGWLGL
Trigger: TAGGCCCAGCCAGCCCGACCAGGTTAGGGACTCAGA...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGACTCTGGGCTTCTGCTaGTCCAGGGTATGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQTLGFC*SRVCKK
Trigger: CTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGT...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAAGTGAGTGGGCTGCCCTaGGACATTTCCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKVSGLP*DISVRM
Trigger: CATCCTGACGGAAATGTCCCAGGGCAGCCCACTCAC...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGTTCACCTGCACATTTTaGAACTCGCGCTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQFTCTF*NSRCRI
Trigger: GATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAA...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCTTTGCGCCTCGAACATaGCCACTTTCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GLSDCWRFWEIPSELCPSFAPRT*PLSGSP
Trigger: AGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAA...GGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAAACGCCACCTCCAAGCCCCTATGTAGGAGGCCGGGGAAGTAAAGATCTAGAAAACATGCCCACTTTCTaGTTCACCTGCACATTTTGC +
Preference number: 4 (lower is better)
Translates to: ETPPPSPYVGGRGSKDLENMPTF*FTCTFC
Trigger: GCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTT...TTCTAGATCTTTACTTCCCCGGCCTCCTACATAGGGGCTTGGAGGTGGCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCCCCAGGGAGGCACTaGGGTTCTTTCAATTTTGTT +
Preference number: 4 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPSPGRH*GSFNFV
Trigger: AACAAAATTGAAAGAACCCCAGTGCCTCCCTGGGGA...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCCTTTCTCCTCTTCAGTaGGGGCCTCAGGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSLSPLQ*GPQGPP
Trigger: AGGTGGACCCTGAGGCCCCCACTGAAGAGGAGAAAG...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCACTTTCTGGTTCACCTaGACATTTTGCAACTCGCGC +
Preference number: 4 (lower is better)
Translates to: GLSDCWRFWEIPSELCPSTFWFT*TFCNSR
Trigger: GCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGT...GGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCATCTTTCTCCATGACTTaGTCACTCTGGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPSFSMT*SLWASA
Trigger: AGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAAGA...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp TCTCTCAGTAAAAGAGGAGGTGATAAGCCCAGAGGTGAAGAGGATAGCTCCAAATCTTGTCAGTTTCCATaGGTGTGGGTGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SLSKRGGDKPRGEEDSSKSCQFP*VWVSHS
Trigger: GCTGTGGCTCACCCACACCCATGGAAACTGACAAGA...TTTGGAGCTATCCTCTTCACCTCTGGGCTTATCACCTCCTCTTTTACTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCCCCCGAGGGCTTCCTTaGATCTCCTCTAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KSYKLYTLFNQRGYLLQSPRGLP*ISSSPP
Trigger: TGGAGGGCTAGAGGAGATCCAAGGAAGCCCTCGGGG...GCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCGCATGTCCTGCCAGCTaGATCCAGGGGTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSACPAS*IQGYFF
Trigger: GAAGAAGTACCCCTGGATCCAGCTGGCAGGACATGC...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 72 bp AGGAGGGGCCTCTGGCAGGATAGAAGTGAGAATGGTTaGAGGCAGAGAGTGGGTACTAGCATACAAATACAA +
Preference number: 4 (lower is better)
Translates to: RRGLWQDRSENG*RQRVGTSIQIQ
Trigger: TTGTATTTGTATGCTAGTACCCACTCTCTGCCTCAAACCATTCTCACTTCTATCCTGCCAGAGGCCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCAGCCCTCCATCCTCCTaGGCACCCATATCTGTAATG +
Preference number: 4 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSSPPSS*APISVM
Trigger: CATTACAGATATGGGTGCTCAGGAGGATGGAGGGCT...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GATGCAGAACCCCAGAGATTGTATTTCCAACTCCCAGAAATCAGGTCCCTGTCCCTTTATCTTTCTCCATaGCTTGCTCACTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DAEPQRLYFQLPEIRSLSLYLSP*LAHSGL
Trigger: AAGCCCAGAGTGAGCAAGTCATGGAGAAAGATAAAG...GGACAGGGACCTGATTTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCATGGAACTCTCAGGCTaGATTCCCATCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSMELSG*IPILSP
Trigger: TGGGGACAGGATGGGAATGCAGCCTGAGAGTTCCAT...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR TCA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATTGCCCACCAACAGAATaGATTCCTCTTCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: EATCFRAEVANNNDLSSHCPPTE*IPLPTL
Trigger: AAGGGTGGGAAGAGGAATTCATTCTGTTGGTGGGCA...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCGCAGAGCTCTGTGCCTaGATTTGCGCCTCGAACATG +
Preference number: 4 (lower is better)
Translates to: KSYKLYTLFNQRGYLLQSAELCA*ICASNM
Trigger: CATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGC...GCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCCTAACCTGGTCGGGCTaGCTGGGCCTAAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVLTWSG*LGLKEG
Trigger: CCCCTCTTTTAGGCCCAGCCAGCCCGACCAGGTTAG...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATCACTGGGCCAAACTATaGAACTCTCAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: EATCFRAEVANNNDLSSHHWAKL*NSQAAF
Trigger: GAATGCAGCCTGAGAGTTCCATAGTTTGGCCCAGTG...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
3UTR CAA 72 bp GGAGGGAACTTTTGGCCAGATCATAGCTGTAGACTCTaGGAATTAATGATACCCCTTCCCAGCAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: GGNFWPDHSCRL*ELMIPLPSKWP
Trigger: TGGCCATTTGCTGGGAAGGGGTATCATTAATTCCAAGAGTCTACAGCTATGATCTGGCCAAAAGTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp AAAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGGGATGTTGCTGGGGCTaGAGGCCTCTTTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KVIQVVHSFQSERLLASEGCCWG*RPLLRR
Trigger: CCTCCTTAAAAGAGGCCTGCAGCCCCAGCAACATCC...CTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAGGCTACTTGCTTCAGAGCTGAAGTGGCGAATAACAATGATCTATCTTCCCATTGCTCCTTCTTGTCATaGATGAAGAGGAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EATCFRAEVANNNDLSSHCSFLS*MKRREL
Trigger: CAGCTCTCTCCTCTTCATCCATGACAAGAAGGAGCA...ATGGGAAGATAGATCATTGTTATTCGCCACTTCAGCTCTGAAGCAAGTAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCAAGGATGCGGCCATTTaGAGCTGCCTTGAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVKDAAI*SCLEAP
Trigger: GGGAGCTTCAAGGCAGCTGCAAATGGCCGCATCCTT...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp AAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCAAAGCCTCGGTGACCTaGTCCCTTGTTTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSYKLYTLFNQRGYLLQSKASVT*SLVLVF
Trigger: GAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTT...GCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCATGACTTGCTCACTCTaGGCTTCTGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVMTCSL*ASAGPG
Trigger: CCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCAT...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CCA 90 bp AAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCCTTCCGGAAGGGGCGTaGTTTTCCCAAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: KSYKLYTLFNQRGYLLQSLPEGA*FSQSQS
Trigger: TGATTGACTTTGGGAAAACCACGCCCCTTCCGGAAG...GCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCTTTTGCAACTCGCGCTaGAGAATCCGCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVFCNSR*RIRSFL
Trigger: GAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAA...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR GCA 90 bp AAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCATCTGTAATGATGACTaGAGGGATGGCTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: KSYKLYTLFNQRGYLLQSICNDD*RDGWDV
Trigger: AACATCCCAGCCATCCCTGCAGTCATCATTACAGAT...GCTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp GGGCTGAAGACGCTGCCGGGACTCAGCGCGGCCCTCCCGGAGGGCTaGGGCGTCTCGCTGCCGCTGGGCCGGGGGCCGCCACTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GLKTLPGLSAALPEG*GVSLPLGRGPPLLS
Trigger: GCTCAAGAGTGGCGGCCCCCGGCCCAGCGGCAGCGAGACGCCCCAGCCCTCCGGGAGGGCCGCGCTGAGTCCCGGCAGCGTCTTCAGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp GCCTCCTCTGGCCCAGGTGGGGAGAGGATGCGGGCCGCCACCACCTaGTGCGCGTCCCCTCGCAGGCGGCCAGCCCAACTGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: ASSGPGGERMRAATT*CASPRRRPAQLGLP
Trigger: GGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGGACGCGCAGCAGGTGGTGGCGGCCCGCATCCTCTCCCCACCTGGGCCAGAGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp CCGCCACCACCTGCTGCGCGTCCCCTCGCAGGCGGCCAGCCCAACTaGGACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPPPAARPLAGGQPN*DCPRHCCCCCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGGACGCGCAGCAGGTGGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CCCCTCGCAGGCGGCCAGCCCAACTGGGACTGCCCACGCCACTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGCTGC +
Preference number: 5 (lower is better)
Translates to: PLAGGQPNWDCPRHC*CCCCCCCCHLRYRC
Trigger: GCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CGTCCCCTCGCAGGCGGCCAGCCCAACTGGGACTGCCCACGCCACTaGTGCTGCTGCTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGC +
Preference number: 5 (lower is better)
Translates to: RPLAGGQPNWDCPRH*CCCCCCCCCHLRYR
Trigger: GCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CCACCTGCTGCGCGTCCCCTCGCAGGCGGCCAGCCCAACTGGGACTaGCCACGCCACTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PPAARPLAGGQPNWD*PRHCCCCCCCCCCH
Trigger: GTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGGACGCGCAGCAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGCTaGTACTATTCAGCCTGCGCCGGCCGCTGCGCCAGCCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCHLRYR*YYSACAGRCASPQD
Trigger: GTCCTGGGGGCTGGCGCAGCGGCCGGCGCAGGCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CTCGCAGGCGGCCAGCCCAACTGGGACTGCCCACGCCACTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: LAGGQPNWDCPRHCC*CCCCCCCHLRYRCY
Trigger: GTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp TTGCAACTCGCGCTGCAGAATCCGCAGCTTCCTCTGGGCCTCCTCTaGCCCAGGTGGGGAGAGGATGCGGGCCGCCACCACCTGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LQLALQNPQLPLGLL*PRWGEDAGRHHLLR
Trigger: GCGCAGCAGGTGGTGGCGGCCCGCATCCTCTCCCCACCTGGGCCAGAGGAGGCCCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGCACCTCCGCTACCGCTGCTACTATTCAGCCTGCGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: WDCPRHCCCCCCCCC*HLRYRCYYSACAGR
Trigger: GCGGCCGGCGCAGGCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp GCAGGCGGCCAGCCCAACTGGGACTGCCCACGCCACTGCTGCTGCTaGTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGCTGCTACTAT +
Preference number: 5 (lower is better)
Translates to: AGGQPNWDCPRHCCC*CCCCCCHLRYRCYY
Trigger: ATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp AACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCCACCTCCGCTACCGCTGCTACTATTCAGCCTGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: NWDCPRHCCCCCCCC*CHLRYRCYYSACAG
Trigger: GCCGGCGCAGGCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp GGCCAGCCCAACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCCACCTCCGCTACCGCTGCTACTATTCAGCC +
Preference number: 5 (lower is better)
Translates to: GQPNWDCPRHCCCCC*CCCCHLRYRCYYSA
Trigger: GGCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp ACCTGCACATTTTGCAACTCGCGCTGCAGAATCCGCAGCTTCCTCTaGGCCTCCTCTGGCCCAGGTGGGGAGAGGATGCGGGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: TCTFCNSRCRIRSFL*ASSGPGGERMRAAT
Trigger: GGTGGCGGCCCGCATCCTCTCCCCACCTGGGCCAGAGGAGGCCCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CAGCCCAACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCCACCTCCGCTACCGCTGCTACTATTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QPNWDCPRHCCCCCC*CCCHLRYRCYYSAC
Trigger: GCAGGCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 90 bp CTCCTCCGAGTCATCGTAAGAAGAGGAGAAGCCAGTGGAGGAGGCTaGGGAGGAGGACAGCTTCCTCAGAGGCAGGGGACCCCGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLRVIVRRGEASGGG*GGGQLPQRQGTPRA
Trigger: AGCCCTCGGGGTCCCCTGCCTCTGAGGAAGCTGTCCTCCTCCTCAGCCTCCTCCACTGGCTTCTCCTCTTCTTACGATGACTCGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp AGGGCGAACGAGCCCTACCCAAACGCGGGCTTCGGGGCGCTTGAATaGCAGAGCTCTGTGCCTGGATTTGCGCCTCGAACATGCCCACTT +
Preference number: 5 (lower is better)
Translates to: RANEPYPNAGFGALE*QSSVPGFAPRTCPL
Trigger: AAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAAGCCCGCGTTTGGGTAGGGCTCGTTCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp AGCGCTCCAGTGAGGGAGCAACCCTCTTGTCAGTTTCCATGGGTGTaGGTGAGCCACAGCGGGGACTGGCCGGGGTACCTCTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SAPVREQPSCQFPWV*VSHSGDWPGYLFPF
Trigger: GAATGGAAAGAGGTACCCCGGCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCCTCACTGGAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp CCTACCCAAACGCGGGCTTCGGGGCGCTTGAATGGCAGAGCTCTGTaGCTGGATTTGCGCCTCGAACATGCCCACTTTCTGGTTCACCTG +
Preference number: 5 (lower is better)
Translates to: PTQTRASGRLNGRAL*LDLRLEHAHFLVHL
Trigger: CAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAAGCCCGCGTTTGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp TTCCAAAGCGCTCCAGTGAGGGAGCAACCCTCTTGTCAGTTTCCATaGGTGTGGGTGAGCCACAGCGGGGACTGGCCGGGGTACCTCTTT +
Preference number: 5 (lower is better)
Translates to: FQSAPVREQPSCQFP*VWVSHSGDWPGYLF
Trigger: AAAGAGGTACCCCGGCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCCTCACTGGAGCGCTTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp TCACTCTGGGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTGAGTTaGGGTCCAGCGTGCGCTCAGGGTCACTGGAGATGTCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: SLWASAGPGYAKRLS*GPACAQGHWRCPPP
Trigger: CGGAGGAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 90 bp CTTGCTCACTCTGGGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTaGGTTGGGGTCCAGCGTGCGCTCAGGGTCACTGGAGATGTCCTC +
Preference number: 5 (lower is better)
Translates to: LAHSGLLLVQGMQKG*VGVQRALRVTGDVL
Trigger: GAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp GTGTCCAGATCAGGGGAGCTTCCTCCAAGGCACTGGGCCAAACTATaGAACTCTCAGGCTGCATTCCCATCCTGTCCCCAGGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: VSRSGELPPRHWAKL*NSQAAFPSCPQGGT
Trigger: AGTGCCTCCCTGGGGACAGGATGGGAATGCAGCCTGAGAGTTCCATAGTTTGGCCCAGTGCCTTGGAGGAAGCTCCCCTGATCTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TCTGCTGGTCCAGGGTATGCAAAAAGGCTGAGTTGGGGTCCAGCGTaGGCTCAGGGTCACTGGAGATGTCCTCCTCCGAGTCATCGTAAG +
Preference number: 5 (lower is better)
Translates to: SAGPGYAKRLSWGPA*AQGHWRCPPPSHRK
Trigger: CTTACGATGACTCGGAGGAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TTTCTCCATGACTTGCTCACTCTGGGCTTCTGCTGGTCCAGGGTATaGAAAAAGGCTGAGTTGGGGTCCAGCGTGCGCTCAGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: FLHDLLTLGFCWSRV*KKAELGSSVRSGSL
Trigger: CAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp ACATCCGCCATTAACCGGTCCAGGCAGCGCTGCTCAGACTCACAGTaGTTCTTAAGGATGCGGCCATTTGCAGCTGCCTTGAAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TSAINRSRQRCSDSQ*FLRMRPFAAALKLP
Trigger: AGGGAGCTTCAAGGCAGCTGCAAATGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAGCAGCGCTGCCTGGACCGGTTAATGGCGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp ACGAAGGGTCTCAGCACATCCGCCATTAACCGGTCCAGGCAGCGCTaGTCAGACTCACAGTGCTTCTTAAGGATGCGGCCATTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TKGLSTSAINRSRQR*SDSQCFLRMRPFAA
Trigger: AGCTGCAAATGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAGCAGCGCTGCCTGGACCGGTTAATGGCGGATGTGCTGAGACCCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp GCAGAGCTCTGTGCCTGGATTTGCGCCTCGAACATGCCCACTTTCTaGTTCACCTGCACATTTTGCAACTCGCGCTGCAGAATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AELCAWICASNMPTF*FTCTFCNSRCRIRS
Trigger: GCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp AAGGTGAACAGCATCTGTCTTGAGGCTATACCTGCTCAGGGTTCCTCTGGCCACGCTCTGTGCCTGGATTaGCGCCTCGAACATGCCCAC +
Preference number: 5 (lower is better)
Translates to: KVNSICLEAIPAQGSSGHALCLD*RLEHAH
Trigger: GTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGC...GTGGCCAGAGGAACCCTGAGCAGGTATAGCCTCAAGACAGATGCTGTTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGGTTGAGCCGGTCTCCTaGCCCAGAAACTGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQVEPVS*PRNCPR
Trigger: ACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAAC...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp ATTTGCGCCTCGAACATGCCCACTTTCTGGTTCACCTGCACATTTTaGAACTCGCGCTGCAGAATCCGCAGCTTCCTCTGGGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ICASNMPTFWFTCTF*NSRCRIRSFLWASS
Trigger: AGAGGAGGCCCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TGTGCCTGGATTTGCGCCTCGAACATGCCCACTTTCTGGTTCACCTaGACATTTTGCAACTCGCGCTGCAGAATCCGCAGCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CAWICASNMPTFWFT*TFCNSRCRIRSFLW
Trigger: CCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp GCGCTTGAATGGCAGAGCTCTGTGCCTGGATTTGCGCCTCGAACATaGCCACTTTCTGGTTCACCTGCACATTTTGCAACTCGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALEWQSSVPGFAPRT*PLSGSPAHFATRAA
Trigger: TGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp TATGCAAAAAGGCTGAGTTGGGGTCCAGCGTGCGCTCAGGGTCACTaGAGATGTCCTCCTCCGAGTCATCGTAAGAAGAGGAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: YAKRLSWGPACAQGH*RCPPPSHRKKRRSQ
Trigger: CTGGCTTCTCCTCTTCTTACGATGACTCGGAGGAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp ATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTAAGGGCAGTAATCAGGGCTTCTTCCGGGCCTaGGTGAGTTCTTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IVPSSGPSHSKQIKGSNQGFFRA*VSSSSR
Trigger: CCTGGAGGAAGAACTCACCAAGGCCCGGAAGAAGCC...CTGATTACTGCCCTTAATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGCAGGGGTACTTCTTCTaGAAGGACATGACAAAGGGG +
Preference number: 5 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGQGYFF*KDMTKG
Trigger: CCCCTTTGTCATGTCCTTCAAGAAGAAGTACCCCTG...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp TGGTATCTGGGGTTTCTGTACATTGTTCTCCCCAGGACTTTGTTCTaGGTTCCTCACTTGGAGAACACGGAGCCAAGACCCTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: WYLGFLYIVLPRTLF*VPHLENTEPRPFRG
Trigger: CCCCCGAAAGGGTCTTGGCTCCGTGTTCTCCAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GAAACGCCACCTCCAAGCCCCTATGTAGGAGGCCGGGGAAGTAAAGATCTAGAAGTTCTCCCCAGGACTTaGTTCTGCGTTCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: ETPPPSPYVGGRGSKDLEVLPRT*FCVPHL
Trigger: CAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAAC...TTCTAGATCTTTACTTCCCCGGCCTCCTACATAGGGGCTTGGAGGTGGCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GTGTGTAAAGCAGAGCTGACCACCAAGACATCTGGTGGCCCAAGAGCAGGAGGGCTCTCTTCTGGTCTTTaGATGACTTCAGGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VCKAELTTKTSGGPRAGGLSSGL*MTSGVQ
Trigger: CTGGACACCTGAAGTCATCAAAAGACCAGAAGAGAG...CCCTCCTGCTCTTGGGCCACCAGATGTCTTGGTGGTCAGCTCTGCTTTACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp GGAAGGGGCGTGGTTTTCCCAAAGTCAATCATCCACACCTTGGCTTaGTCCTTCTTGTCATGGATGAAGAGGAGAGAGCTGCCAATGACC +
Preference number: 5 (lower is better)
Translates to: GRGVVFPKSIIHTLA*SFLSWMKRRELPMT
Trigger: GGTCATTGGCAGCTCTCTCCTCTTCATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGATGATTGACTTTGGGAAAACCACGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp CGAGGGGTGTGTGCTGAGTCTGCTTCTCCTTCCAGAGTTGGTATCTaGGGTTTCTGTACATTGTTCTCCCCAGGACTTTGTTCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: RGVCAESASPSRVGI*GFCTLFSPGLCSAF
Trigger: GAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCAACTCTGGAAGGAGAAGCAGACTCAGCACACACCCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 90 bp ATGTTCTTTATCTTTCTCCATGACTTGCTCACTCTGGGCTTCTGCTaGTCCAGGGTATGCAAAAAGGCTGAGTTGGGGTCCAGCGTGCGC +
Preference number: 5 (lower is better)
Translates to: MFFIFLHDLLTLGFC*SRVCKKAELGSSVR
Trigger: GCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAAGATAAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp TTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACAGAAGGAAGGAGGGGCCCTTGTTTTGGTCTTCTaGAAGTCACGGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: FWEIPSELCPSPQKEGGALVLVF*KSRFTE
Trigger: CTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAG...GGCCCCTCCTTCCTTCTGTGGGGATGGGCAGAGCTCAGATGGAATTTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GAAACGCCACCTCCAAGCCCCTATGTAGGAGGCCGGGGAAGTAAAGATCTAGAAACCTGCTCCCTTGTTTaGGTCTTCTTGAAGTCACGG +
Preference number: 5 (lower is better)
Translates to: ETPPPSPYVGGRGSKDLETCSLV*VFLKSR
Trigger: CCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGT...TTCTAGATCTTTACTTCCCCGGCCTCCTACATAGGGGCTTGGAGGTGGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATTTGGCTTGCTCCTTCTaGTCATGGATGAAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADLACSF*SWMKRR
Trigger: TCTCCTCTTCATCCATGACAAGAAGGAGCAAGCCAA...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp ACCATGTTCTTTATCTTTCTCCATGACTTGCTCACTCTGGGCTTCTaGTGGTCCAGGGTATGCAAAAAGGCTGAGTTGGGGTCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: TMFFIFLHDLLTLGF*WSRVCKKAELGSSV
Trigger: CACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAAGATAAAGAACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCATCTGAGCTCTGCCCATCCCCACTCTTGAGCTCGTaGGTGCTGTTCATGATCACC +
Preference number: 5 (lower is better)
Translates to: GLSDCWRFWEIPSELCPSPLLSS*VLFMIT
Trigger: GGTGATCATGAACAGCACCAACGAGCTCAAGAGTGG...GGATGGGCAGAGCTCAGATGGAATTTCCCAGAACCTCCAACAGTCTGATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GGTGTGAGCCTTGAGTATTGTGCCCAGCTCTGGACCTTCCCACAGCAAGCAGATGGGGTTCTTTCAATTTaGTTGTTACTTCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GVSLEYCAQLWTFPQQADGVLSI*LLLPQV
Trigger: CACCTGGGGAAGTAACAACAAAATTGAAAGAACCCC...ATCTGCTTGCTGTGGGAAGGTCCAGAGCTGGGCACAATACTCAAGGCTCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GCAGGCCTCCCAGAACTCGGTTTATCAGACTGTTGGAGGTTCTGGGAAATTCCACATCCACACCTTGGCTaGCTCCTTCTTGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: AGLPELGLSDCWRFWEIPHPHLG*LLLVMD
Trigger: ATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGATG...TGGAATTTCCCAGAACCTCCAACAGTCTGATAAACCGAGTTCTGGGAGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GATGCAGAACCCCAGAGATTGTATTTCCAACTCCCAGAAATCAGGTCCCTGTCCTGGGGTTTCTGTACATaGTTCTCCCCAGGACTTTGT +
Preference number: 5 (lower is better)
Translates to: DAEPQRLYFQLPEIRSLSWGFCT*FSPGLC
Trigger: ACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCA...GGACAGGGACCTGATTTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp AACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTGGGTCCCTCCTCCCCATTTGCAGCTGCCTaGAAGCTCCCTGCATGTCCT +
Preference number: 5 (lower is better)
Translates to: NEFLFKHLYLYIVVGPSSPFAAA*KLPACP
Trigger: AGGACATGCAGGGAGCTTCAAGGCAGCTGCAAATGG...GGAGGAGGGACCCACGACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GCCTCTGTACATGCCATCCAGAGTCTCTCAGTAAAAGAGGAGGTGATAAGCCCATCAATCATCCACACCTaGGCTTGCTCCTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ASVHAIQSLSVKEEVISPSIIHT*ACSFLS
Trigger: TGACAAGAAGGAGCAAGCCAAGGTGTGGATGATTGA...TGGGCTTATCACCTCCTCTTTTACTGAGAGACTCTGGATGGCATGTACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 90 bp ATGTTCTGGTTTCCCTTAGTGAATTCTCTGAAAGCCTCGGTGACCTaGTCCCTTGTTTTGGTCTTCTTGAAGTCACGGTTCACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: MFWFPLVNSLKASVT*SLVLVFLKSRFTEP
Trigger: TGGCTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTTCAGAGAATTCACTAAGGGAAACCAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTCCTGACACCCATCTaGCAGTCCATCACGCAGGGC +
Preference number: 5 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVVLTPI*QSITQG
Trigger: GCCCTGCGTGATGGACTGCAAGATGGGTGTCAGGAC...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GATGCAGAACCCCAGAGATTGTATTTCCAACTCCCAGAAATCAGGTCCCTGTCCGTTCTTTCAATTTTGTaGTTACTTCCCCAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: DAEPQRLYFQLPEIRSLSVLSIL*LLPQVV
Trigger: TACCACCTGGGGAAGTAACAACAAAATTGAAAGAAC...GGACAGGGACCTGATTTCTGGGAGTTGGAAATACAATCTCTGGGGTTCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp GAGCCAGGAAGTTTAAACGAGTTCCTTTTTAAACATCTGTACTTATACATCGTCGTTCACCTGCACATTTaGCAACTCGCGCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: EPGSLNEFLFKHLYLYIVVHLHI*QLALQN
Trigger: ATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAAC...GACGATGTATAAGTACAGATGTTTAAAAAGGAACTCGTTTAAACTTCCTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS-3UTR CAA 90 bp AAAGTCATACAAGTTGTACACTCTTTTCAATCAGAGAGGCTACTTGCTTCAGAGCTTCTCCTTCCAGAGTaGGTATCTGGGGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: KVIQVVHSFQSERLLASELLLPE*VSGVSV
Trigger: TACAGAAACCCCAGATACCAACTCTGGAAGGAGAAG...CTCTGAAGCAAGTAGCCTCTCTGATTGAAAAGAGTGTACAACTTGTATGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GGCCCAGGTGGGGAGAGGATGCGGGCCGCCACCACCTaGTGCGCGTCCCCTCGCAGGCGGCCAGCCCAACTG +
Preference number: 6 (lower is better)
Translates to: GPGGERMRAATT*CASPRRRPAQL
Trigger: CAGTTGGGCTGGCCGCCTGCGAGGGGACGCGCAGCAGGTGGTGGCGGCCCGCATCCTCTCCCCACCTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CCAGGTGGGGAGAGGATGCGGGCCGCCACCACCTGCTaGGCGTCCCCTCGCAGGCGGCCAGCCCAACTGGGA +
Preference number: 6 (lower is better)
Translates to: PGGERMRAATTC*ASPRRRPAQLG
Trigger: TCCCAGTTGGGCTGGCCGCCTGCGAGGGGACGCGCAGCAGGTGGTGGCGGCCCGCATCCTCTCCCCACCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GCGCGTCCCCTCGCAGGCGGCCAGCCCAACTGGGACTaGCCACGCCACTGCTGCTGCTGCTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ARPLAGGQPNWD*PRHCCCCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCCTGCGAGGGGACGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GGCGGCCAGCCCAACTGGGACTGCCCACGCCACTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCCACCTCCGC +
Preference number: 6 (lower is better)
Translates to: GGQPNWDCPRHC*CCCCCCCCHLR
Trigger: GCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CAGCCCAACTGGGACTGCCCACGCCACTGCTGCTGCTaGTGTTGCTGCTGCTGCTGCCACCTCCGCTACCGC +
Preference number: 6 (lower is better)
Translates to: QPNWDCPRHCCC*CCCCCCHLRYR
Trigger: GCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GGCCAGCCCAACTGGGACTGCCCACGCCACTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCCACCTCCGCTAC +
Preference number: 6 (lower is better)
Translates to: GQPNWDCPRHCC*CCCCCCCHLRY
Trigger: GTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GGGTCCGGACAGGCTCTGGGGTTGAGCCGGTCTCCTTaGCCAGAAACTGCCCCCGTCTCTCCATCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: GSGQALGLSRSP*PETAPVSPSGP
Trigger: AGGCCCAGATGGAGAGACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAACCCCAGAGCCTGTCCGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp GGCGTCTCGCTGCCGCTGGGCCGGGGGCCGCCACTCTaGAGCTCGTTGGTGCTGTTCATGATCACCAGGCTA +
Preference number: 6 (lower is better)
Translates to: GVSLPLGRGPPL*SSLVLFMITRL
Trigger: TAGCCTGGTGATCATGAACAGCACCAACGAGCTCAAGAGTGGCGGCCCCCGGCCCAGCGGCAGCGAGACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp TGGGTCCGGACAGGCTCTGGGGTTGAGCCGGTCTCCTaGCCCAGAAACTGCCCCCGTCTCTCCATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: WVRTGSGVEPVS*PRNCPRLSIWA
Trigger: GGCCCAGATGGAGAGACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAACCCCAGAGCCTGTCCGGACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp CGGCCAGCCCAACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCCACCTCCGCTACCGCTGCTACTATTCAGC +
Preference number: 6 (lower is better)
Translates to: RPAQLGLPTPLLLLL*LLLLPPPLPLLLFS
Trigger: GCTGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTGGGCTGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp TCTCTCATGTGGGTCCGGACAGGCTCTGGGGTTGAGCCGGTCTCCTaGCCCAGAAACTGCCCCCGTCTCTCCATCTGGGCCTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: SLMWVRTGSGVEPVS*PRNCPRLSIWASQG
Trigger: CCCCTGGGAGGCCCAGATGGAGAGACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAACCCCAGAGCCTGTCCGGACCCACATGAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp AACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCCACCTCCGCTACCGCTGCTAC +
Preference number: 6 (lower is better)
Translates to: NWDCPRHCCCCC*CCCCHLRYRCY
Trigger: GTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GCTCCAGTGAGGGAGCAACCCTCTTGTCAGTTTCCATaGGTGTGGGTGAGCCACAGCGGGGACTGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: APVREQPSCQFP*VWVSHSGDWPG
Trigger: CCCCGGCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCCTCACTGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CAACTGGGACTGCCCACGCCACTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCCACCTCCGCTACCGCTGCTA +
Preference number: 6 (lower is better)
Translates to: QLGLPTPLLLLL*LLLLPPPLPLL
Trigger: TAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCAGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp GGGTTCTCTCATGTGGGTCCGGACAGGCTCTGGGGTTaGGCCGGTCTCCTTGCCCAGAAACTGCCCCCGTCT +
Preference number: 6 (lower is better)
Translates to: GFSHVGPDRLWG*AGLLAQKLPPS
Trigger: AGACGGGGGCAGTTTCTGGGCAAGGAGACCGGCTCAACCCCAGAGCCTGTCCGGACCCACATGAGAGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp TGGGACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCCACCTCCGCTACCGCTGCTACTAT +
Preference number: 6 (lower is better)
Translates to: WDCPRHCCCCCC*CCCHLRYRCYY
Trigger: ATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GTGAGGGAGCAACCCTCTTGTCAGTTTCCATGGGTGTaGGTGAGCCACAGCGGGGACTGGCCGGGGTACCTC +
Preference number: 6 (lower is better)
Translates to: VREQPSCQFPWV*VSHSGDWPGYL
Trigger: GAGGTACCCCGGCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CTGCCGCTGGGCCGGGGGCCGCCACTCTTGAGCTCGTaGGTGCTGTTCATGATCACCAGGCTATTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LPLGRGPPLLSS*VLFMITRLLRA
Trigger: TGCCCTCAATAGCCTGGTGATCATGAACAGCACCAACGAGCTCAAGAGTGGCGGCCCCCGGCCCAGCGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp GGGAGCAACCCTCTTGTCAGTTTCCATGGGTGTGGGTaGGCCACAGCGGGGACTGGCCGGGGTACCTCTTTC +
Preference number: 6 (lower is better)
Translates to: GSNPLVSFHGCG*ATAGTGRGTSF
Trigger: GAAAGAGGTACCCCGGCCAGTCCCCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GACTGCCCACGCCACTGCTGCTGCTGCTGTTGCTGCTaGTGCTGCCACCTCCGCTACCGCTGCTACTATTCA +
Preference number: 6 (lower is better)
Translates to: DCPRHCCCCCCC*CCHLRYRCYYS
Trigger: TGAATAGTAGCAGCGGTAGCGGAGGTGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTGGCGTGGGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GAGCCCTACCCAAACGCGGGCTTCGGGGCGCTTGAATaGCAGAGCTCTGTGCCTGGATTTGCGCCTCGAACA +
Preference number: 6 (lower is better)
Translates to: EPYPNAGFGALE*QSSVPGFAPRT
Trigger: TGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAAGCCCGCGTTTGGGTAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp ATTCCTCTTCCCACCCTTCCAGGGGGTTCTCTCATGTaGGTCCGGACAGGCTCTGGGGTTGAGCCGGTCTCC +
Preference number: 6 (lower is better)
Translates to: IPLPTLPGGSLM*VRTGSGVEPVS
Trigger: GGAGACCGGCTCAACCCCAGAGCCTGTCCGGACCCACATGAGAGAACCCCCTGGAAGGGTGGGAAGAGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GCTGGAGAGCCTTCTCTCTCACTGTCCAGGGTCTGCTaGGGCCCTCGCATCCCTGGGATCCTATTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: AGEPSLSLSRVC*GPRIPGILFPP
Trigger: GGGAGGAAATAGGATCCCAGGGATGCGAGGGCCCCAGCAGACCCTGGACAGTGAGAGAGAAGGCTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp GTGGGCTGCCCTGGGACATTTCCGTCAGGATGTCGATaGGGTTGTCCAGCCCTGAGAGGTAGCCATCCTCCC +
Preference number: 6 (lower is better)
Translates to: VGCPGTFPSGCR*GCPALRGSHPP
Trigger: GGGAGGATGGCTACCTCTCAGGGCTGGACAACCTCATCGACATCCTGACGGAAATGTCCCAGGGCAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp ACGCGGGCTTCGGGGCGCTTGAATGGCAGAGCTCTGTaGCTGGATTTGCGCCTCGAACATGCCCACTTTCTG +
Preference number: 6 (lower is better)
Translates to: TRASGRLNGRAL*LDLRLEHAHFL
Trigger: CAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAAGCCCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp CTCACTGTCCAGGGTCTGCTGGGGCCCTCGCATCCCTaGGATCCTATTTCCTCCCTTCTCAGGTCCTACGGA +
Preference number: 6 (lower is better)
Translates to: LTVQGLLGPSHP*DPISSLLRSYG
Trigger: TCCGTAGGACCTGAGAAGGGAGGAAATAGGATCCCAGGGATGCGAGGGCCCCAGCAGACCCTGGACAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GGGCATCTCTTGGCAGCTAGGGTGAGCATCTCCGTCTaGCAGCTGGCTTCCCCAAGTCCCCTTCGACTGTAC +
Preference number: 6 (lower is better)
Translates to: GHLLAARVSISV*QLASPSPLRLY
Trigger: GTACAGTCGAAGGGGACTTGGGGAAGCCAGCTGCCAGACGGAGATGCTCACCCTAGCTGCCAAGAGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp CTCACTCTGGGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTGAGTaGGGGTCCAGCGTGCGCTCAGGGTCACTGGAGATGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LTLGFCWSRVCKKAE*GSSVRSGSLEMSSS
Trigger: GGAGGAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp GGGCCACTCCCTCCTTGTCCTTCGAGGGGTGTGTGCTaGGTCTGCTTCTCCTTCCAGAGTTGGTATCTGGGG +
Preference number: 6 (lower is better)
Translates to: GPLPPCPSRGVC*VCFSFQSWYLG
Trigger: CCCCAGATACCAACTCTGGAAGGAGAAGCAGACTCAGCACACACCCCTCGAAGGACAAGGAGGGAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp TCTGGGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTaGGTTGGGGTCCAGCGTGCGCTCAGGGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: SGLLLVQGMQKG*VGVQRALRVTG
Trigger: TCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp AGTGCTGGAGAGCCTTCTCTCTCACTGTCCAGGGTCTaGTGGGGCCCTCGCATCCCTGGGATCCTATTTCCT +
Preference number: 6 (lower is better)
Translates to: SAGEPSLSLSRV*WGPRIPGILFP
Trigger: AGGAAATAGGATCCCAGGGATGCGAGGGCCCCAGCAGACCCTGGACAGTGAGAGAGAAGGCTCTCCAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp TCCAAGGCACTGGGCCAAACTATGGAACTCTCAGGCTaGATTCCCATCCTGTCCCCAGGGAGGCACTGGGGT +
Preference number: 6 (lower is better)
Translates to: SKALGQTMELSG*IPILSPGRHWG
Trigger: ACCCCAGTGCCTCCCTGGGGACAGGATGGGAATGCAGCCTGAGAGTTCCATAGTTTGGCCCAGTGCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CCAGGGTATGCAAAAAGGCTGAGTTGGGGTCCAGCGTaGGCTCAGGGTCACTGGAGATGTCCTCCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: PGYAKRLSWGPA*AQGHWRCPPPS
Trigger: ACTCGGAGGAGGACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp GGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTGAGTaGGGGTCCAGCGTGCGCTCAGGGTCACTGGAGATG +
Preference number: 6 (lower is better)
Translates to: GFCWSRVCKKAE*GSSVRSGSLEM
Trigger: CATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp ACGCGGGCTTCGGGGCGCTTGAATGGCAGAGCTCTGTGCCTGGATTaGCGCCTCGAACATGCCCACTTTCTGGTTCACCTGCACATTTTG +
Preference number: 6 (lower is better)
Translates to: TRASGRLNGRALCLD*RLEHAHFLVHLHIL
Trigger: CAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGAAGCCCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GACTTGCTCACTCTGGGCTTCTGCTGGTCCAGGGTATaGAAAAAGGCTGAGTTGGGGTCCAGCGTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: DLLTLGFCWSRV*KKAELGSSVRS
Trigger: TGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CTCAGCACATCCGCCATTAACCGGTCCAGGCAGCGCTaGTCAGACTCACAGTGCTTCTTAAGGATGCGGCCA +
Preference number: 6 (lower is better)
Translates to: LSTSAINRSRQR*SDSQCFLRMRP
Trigger: TGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAGCAGCGCTGCCTGGACCGGTTAATGGCGGATGTGCTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTGAGTTaGGGTCCAGCGTGCGCTCAGGGTCACTGGAGATGT +
Preference number: 6 (lower is better)
Translates to: ASAGPGYAKRLS*GPACAQGHWRC
Trigger: ACATCTCCAGTGACCCTGAGCGCACGCTGGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp TCGGGGCGCTTGAATGGCAGAGCTCTGTGCCTGGATTaGCGCCTCGAACATGCCCACTTTCTGGTTCACCTG +
Preference number: 6 (lower is better)
Translates to: SGRLNGRALCLD*RLEHAHFLVHL
Trigger: CAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCATTCAAGCGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CTAGTTCCAAAGCGCTCCAGTGAGGGAGCAACCCTCTaGTCAGTTTCCATGGGTGTGGGTGAGCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: LVPKRSSEGATL*SVSMGVGEPQR
Trigger: CCGCTGTGGCTCACCCACACCCATGGAAACTGACAAGAGGGTTGCTCCCTCACTGGAGCGCTTTGGAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp GATTTGCGCCTCGAACATGCCCACTTTCTGGTTCACCTGCACATTTaGCAACTCGCGCTGCAGAATCCGCAGCTTCCTCTGGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: DLRLEHAHFLVHLHI*QLALQNPQLPLGLL
Trigger: GAGGAGGCCCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp ACTTTCTGGTTCACCTGCACATTTTGCAACTCGCGCTaGAGAATCCGCAGCTTCCTCTGGGCCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: TFWFTCTFCNSR*RIRSFLWASSG
Trigger: GCCAGAGGAGGCCCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp GAGCTTTGGGCAGTCACAGCCCTCTCTTCTGGTCTTTaGATGACTTCAGGTGTCCAGGAGCCCTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: ELWAVTALSSGL*MTSGVQEPCPP
Trigger: TGGTGGGCAGGGCTCCTGGACACCTGAAGTCATCAAAAGACCAGAAGAGAGGGCTGTGACTGCCCAAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CTCACAGTGCTTCTTAAGGATGCGGCCATTTGCAGCTaGCTTGAAGCTCCCTGCATGTCCTGCCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: LTVLLKDAAICS*LEAPCMSCQLD
Trigger: ATCCAGCTGGCAGGACATGCAGGGAGCTTCAAGGCAGCTGCAAATGGCCGCATCCTTAAGAAGCACTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp CTCAGACTCACAGTGCTTCTTAAGGATGCGGCCATTTaGAGCTGCCTTGAAGCTCCCTGCATGTCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LRLTVLLKDAAI*SCLEAPCMSCQ
Trigger: CTGGCAGGACATGCAGGGAGCTTCAAGGCAGCTGCAAATGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp ATTAACCGGTCCAGGCAGCGCTGCTCAGACTCACAGTaGTTCTTAAGGATGCGGCCATTTGCAGCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: INRSRQRCSDSQ*FLRMRPFAAAL
Trigger: CAAGGCAGCTGCAAATGGCCGCATCCTTAAGAAGCACTGTGAGTCTGAGCAGCGCTGCCTGGACCGGTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp CTAGACCATCTGGGGTCCTCTGAGGGCTCTGAGCTTTaGGCAGTCACAGCCCTCTCTTCTGGTCTTTTGATG +
Preference number: 6 (lower is better)
Translates to: LDHLGSSEGSEL*AVTALSSGLLM
Trigger: CATCAAAAGACCAGAAGAGAGGGCTGTGACTGCCCAAAGCTCAGAGCCCTCAGAGGACCCCAGATGGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp GCAGCTGCCTTGAAGCTCCCTGCATGTCCTGCCAGCTaGATCCAGGGGTACTTCTTCTTGAAGGACATGACA +
Preference number: 6 (lower is better)
Translates to: AAALKLPACPAS*IQGYFFLKDMT
Trigger: TGTCATGTCCTTCAAGAAGAAGTACCCCTGGATCCAGCTGGCAGGACATGCAGGGAGCTTCAAGGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp CGTCGTGTTGTAGGGTCTGGCCTTCCGGAAGGGGCGTaGTTTTCCCAAAGTCAATCATCCACACCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: RRVVGSGLPEGA*FSQSQSSTPWL
Trigger: AAGCCAAGGTGTGGATGATTGACTTTGGGAAAACCACGCCCCTTCCGGAAGGCCAGACCCTACAACACGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp GCATGTCCTGCCAGCTGGATCCAGGGGTACTTCTTCTaGAAGGACATGACAAAGGGGGACCACTGCACCATG +
Preference number: 6 (lower is better)
Translates to: ACPASWIQGYFF*KDMTKGDHCTM
Trigger: CATGGTGCAGTGGTCCCCCTTTGTCATGTCCTTCAAGAAGAAGTACCCCTGGATCCAGCTGGCAGGACATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS TCA 72 bp GTACCTCTTTCCATTCTCACGGAAGTAGATGGACTCTaGGTCCCTAACCTGGTCGGGCTGGCTGGGCCTAAA +
Preference number: 6 (lower is better)
Translates to: VPLSILTEVDGL*VPNLVGLAGPK
Trigger: TTTAGGCCCAGCCAGCCCGACCAGGTTAGGGACTCAGAGTCCATCTACTTCCGTGAGAATGGAAAGAGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp TCGAACATGCCCACTTTCTGGTTCACCTGCACATTTTaGAACTCGCGCTGCAGAATCCGCAGCTTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SNMPTFWFTCTF*NSRCRIRSFLW
Trigger: CCAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp ATTTGCGCCTCGAACATGCCCACTTTCTGGTTCACCTaGACATTTTGCAACTCGCGCTGCAGAATCCGCAGC +
Preference number: 6 (lower is better)
Translates to: ICASNMPTFWFT*TFCNSRCRIRS
Trigger: GCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp TGTGCCTGGATTTGCGCCTCGAACATGCCCACTTTCTaGTTCACCTGCACATTTTGCAACTCGCGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: CAWICASNMPTF*FTCTFCNSRCR
Trigger: TCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CTCGAACATGCCCACTTTCTGGTTCACCTGCACATTTaGCAACTCGCGCTGCAGAATCCGCAGCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LEHAHFLVHLHI*QLALQNPQLPL
Trigger: CAGAGGAAGCTGCGGATTCTGCAGCGCGAGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp TGGCAGAGCTCTGTGCCTGGATTTGCGCCTCGAACATaGCCACTTTCTGGTTCACCTGCACATTTTGCAACT +
Preference number: 6 (lower is better)
Translates to: WQSSVPGFAPRT*PLSGSPAHFAT
Trigger: AGTTGCAAAATGTGCAGGTGAACCAGAAAGTGGGCATGTTCGAGGCGCAAATCCAGGCACAGAGCTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp GGGTTTCTGTACATTGTTCTCCCCAGGACTTTGTTCTaGGTTCCTCACTTGGAGAACACGGAGCCAAGACCC +
Preference number: 6 (lower is better)
Translates to: GFLYIVLPRTLF*VPHLENTEPRP
Trigger: GGGTCTTGGCTCCGTGTTCTCCAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp ATCTTTCTCCATGACTTGCTCACTCTGGGCTTCTGCTaGTCCAGGGTATGCAAAAAGGCTGAGTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: IFLHDLLTLGFC*SRVCKKAELGS
Trigger: GGACCCCAACTCAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp AAGCTCCCTGCATGTCCTGCCAGCTGGATCCAGGGGTACTTCTTCTaGAAGGACATGACAAAGGGGGACCACTGCACCATGTTCTTTATC +
Preference number: 6 (lower is better)
Translates to: KLPACPASWIQGYFF*KDMTKGDHCTMFFI
Trigger: GATAAAGAACATGGTGCAGTGGTCCCCCTTTGTCATGTCCTTCAAGAAGAAGTACCCCTGGATCCAGCTGGCAGGACATGCAGGGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp GTGGTTTTCCCAAAGTCAATCATCCACACCTTGGCTTGCTCCTTCTaGTCATGGATGAAGAGGAGAGAGCTGCCAATGACCTCGTGGCAC +
Preference number: 6 (lower is better)
Translates to: VVFPKSIIHTLACSF*SWMKRRELPMTSWH
Trigger: GTGCCACGAGGTCATTGGCAGCTCTCTCCTCTTCATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGATGATTGACTTTGGGAAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp CAGAGTTGGTATCTGGGGTTTCTGTACATTGTTCTCCCCAGGACTTaGTTCTGCGTTCCTCACTTGGAGAACACGGAGCCAAGACCCTTT +
Preference number: 6 (lower is better)
Translates to: QSWYLGFLYIVLPRT*FCVPHLENTEPRPF
Trigger: AAAGGGTCTTGGCTCCGTGTTCTCCAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp TATCTGGGGTTTCTGTACATTGTTCTCCCCAGGACTTaGTTCTGCGTTCCTCACTTGGAGAACACGGAGCCA +
Preference number: 6 (lower is better)
Translates to: YLGFLYIVLPRT*FCVPHLENTEP
Trigger: TGGCTCCGTGTTCTCCAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp AAAGCCTCGGTGACCTGCTCCCTTGTTTTGGTCTTCTaGAAGTCACGGTTCACAGAGCCATCTTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: KASVTCSLVLVF*KSRFTEPSSFL
Trigger: CAAGAAGGAAGATGGCTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CCAAAGTCAATCATCCACACCTTGGCTTGCTCCTTCTaGTCATGGATGAAGAGGAGAGAGCTGCCAATGACC +
Preference number: 6 (lower is better)
Translates to: PKSIIHTLACSF*SWMKRRELPMT
Trigger: GGTCATTGGCAGCTCTCTCCTCTTCATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGATGATTGACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp GAGTCTGCTTCTCCTTCCAGAGTTGGTATCTGGGGTTTCTGTACATaGTTCTCCCCAGGACTTTGTTCTGCGTTCCTCACTTGGAGAACA +
Preference number: 6 (lower is better)
Translates to: ESASPSRVGIWGFCT*FSPGLCSAFLTWRT
Trigger: TGTTCTCCAAGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCAACTCTGGAAGGAGAAGCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp AATTCTCTGAAAGCCTCGGTGACCTGCTCCCTTGTTTTGGTCTTCTaGAAGTCACGGTTCACAGAGCCATCTTCCTTCTTGATGCCTTCG +
Preference number: 6 (lower is better)
Translates to: NSLKASVTCSLVLVF*KSRFTEPSSFLMPS
Trigger: CGAAGGCATCAAGAAGGAAGATGGCTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTTCAGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 90 bp CCCTTAGTGAATTCTCTGAAAGCCTCGGTGACCTGCTCCCTTGTTTaGGTCTTCTTGAAGTCACGGTTCACAGAGCCATCTTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PLVNSLKASVTCSLV*VFLKSRFTEPSSFL
Trigger: CAAGAAGGAAGATGGCTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTTCAGAGAATTCACTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp TGTGCTGAGTCTGCTTCTCCTTCCAGAGTTGGTATCTaGGGTTTCTGTACATTGTTCTCCCCAGGACTTTGT +
Preference number: 6 (lower is better)
Translates to: CAESASPSRVGI*GFCTLFSPGLC
Trigger: ACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCAACTCTGGAAGGAGAAGCAGACTCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CCA 72 bp CCATGTTCTTTATCTTTCTCCATGACTTGCTCACTCTaGGCTTCTGCTGGTCCAGGGTATGCAAAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: PCSLSFSMTCSL*ASAGPGYAKRL
Trigger: CAGCCTTTTTGCATACCCTGGACCAGCAGAAGCCCAGAGTGAGCAAGTCATGGAGAAAGATAAAGAACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp TCTCCTTCCAGAGTTGGTATCTGGGGTTTCTGTACATaGTTCTCCCCAGGACTTTGTTCTGCGTTCCTCACT +
Preference number: 6 (lower is better)
Translates to: SPSRVGIWGFCT*FSPGLCSAFLT
Trigger: AGTGAGGAACGCAGAACAAAGTCCTGGGGAGAACAATGTACAGAAACCCCAGATACCAACTCTGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp AATTCTCTGAAAGCCTCGGTGACCTGCTCCCTTGTTTaGGTCTTCTTGAAGTCACGGTTCACAGAGCCATCT +
Preference number: 6 (lower is better)
Translates to: NSLKASVTCSLV*VFLKSRFTEPS
Trigger: AGATGGCTCTGTGAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTTCAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS CAA 72 bp CGTGGTTTTCCCAAAGTCAATCATCCACACCTTGGCTaGCTCCTTCTTGTCATGGATGAAGAGGAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: RGFPKVNHPHLG*LLLVMDEEERA
Trigger: AGCTCTCTCCTCTTCATCCATGACAAGAAGGAGCAAGCCAAGGTGTGGATGATTGACTTTGGGAAAACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7
CDS GCA 72 bp TTTCCCTTAGTGAATTCTCTGAAAGCCTCGGTGACCTaGTCCCTTGTTTTGGTCTTCTTGAAGTCACGGTTC +
Preference number: 6 (lower is better)
Translates to: FPLVNSLKASVT*SLVLVFLKSRF
Trigger: GAACCGTGACTTCAAGAAGACCAAAACAAGGGAGCAGGTCACCGAGGCTTTCAGAGAATTCACTAAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070181.7