Pregenerated sensors for ITPKA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027296Ensembl transcript IDs: ENSMUST00000028758.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCCCTTAGTGGATGGCACCCGGTCCTGCAGGACCATGTGAACTaGCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATGCATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: HPLSGWHPVLQDHVN*PPSGVPVSCRHAWW Trigger: CCACCATGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCATCCACTAAGGGGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR GCA 90 bp | CCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATaGATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGC | + |
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Preference number: 1 (lower is better) Translates to: PCELPAQRGSSLLPA*MVGMQPQVHICLTS Trigger: GCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR TCA 90 bp | TACTACACCCCCTTAGTGGATGGCACCCGGTCCTGCAGGACCATGTaGACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATGCAT | + |
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Preference number: 1 (lower is better) Translates to: YYTPLVDGTRSCRTM*TARPAGFQSLAGMH Trigger: ATGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCATCCACTAAGGGGGTGTAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR TCA 90 bp | AGTACAATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTaGGAAGAGCTGGGCTGGGGGAGAAGCCCATTGTTTCTCCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: STIMDRDPLERCKAT*EELGWGRSPLFLPL Trigger: GAGGGGGAGAAACAATGGGCTTCTCCCCCAGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR CCA 90 bp | GGAAGTCTATATACCTGTGAAGTACAATTATGGATCGGGACCCTCTaGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGCTGGGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: GSLYTCEVQLWIGTL*RGAKPLEKSWAGGE Trigger: TTCTCCCCCAGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATTGTACTTCACAGGTATATAGACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTATCCTGCAGGACCATGTaGACTGCCCGCCCAGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: PPPYKLVSFSSGKQACVVSCRTM*TARPAG Trigger: CCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGA...TACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR-3UTR CCA 90 bp | AATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGTCTTGCCGGCATGCATaGTGGGGATGCAGCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: NYGSGPSGEVQSHLRRAGSCRHA*WGCSHR Trigger: CCTGTGGCTGCATCCCCACCATGCATGCCGGCAAGA...CCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR CAA 90 bp | AAGTACAATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTaGAGAAGAGCTGGGCTGGGGGAGAAGCCCATTGTTTCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KYNYGSGPSGEVQSH*RRAGLGEKPIVSPP Trigger: AGGGGGAGAAACAATGGGCTTCTCCCCCAGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATTGTACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTGAATCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTCATGCATGGTGGGGATaGAGCCACAGGTGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: EAESLSFIRKGVHCSAGVHAWWG*SHRCTS Trigger: AGATGTGCACCTGTGGCTGCATCCCCACCATGCATG...AACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGATTCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATGCAACCAGCCGGCCCACGTaGAGGGAAAAGGGCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QDHVNCPPSGVPVSCRHATSRPT*REKGSA Trigger: GGCTGAGCCCTTTTCCCTCAACGTGGGCCGGCTGGT...TGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR TCA 72 bp | CCCTTAGTGGATGGCACCCGGTCCTGCAGGACCATGTaGACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: PLVDGTRSCRTM*TARPAGFQSLA Trigger: GGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCATCCACTAAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR GCA 72 bp | CTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATaGATGGTGGGGATGCAGCCACAGGTGCACATCTGT | + |
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Preference number: 3 (lower is better) Translates to: LPAQRGSSLLPA*MVGMQPQVHIC Trigger: ACAGATGTGCACCTGTGGCTGCATCCCCACCATGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR GCA 72 bp | AGTGGATGGCACCCGGTCCTGCAGGACCATGTGAACTaGCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SGWHPVLQDHVN*PPSGVPVSCRH Trigger: ATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCATCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR CCA 72 bp | ACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTaGGCTGGGGGAGAAGCCCATTGTTTCTCCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TLWRGAKPLEKS*AGGEAHCFSPS Trigger: GGAGGGGGAGAAACAATGGGCTTCTCCCCCAGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR TCA 72 bp | ATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTaGGAAGAGCTGGGCTGGGGGAGAAGCCCATTGTTT | + |
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Preference number: 3 (lower is better) Translates to: MDRDPLERCKAT*EELGWGRSPLF Trigger: AAACAATGGGCTTCTCCCCCAGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR CCA 72 bp | TATACCTGTGAAGTACAATTATGGATCGGGACCCTCTaGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: YTCEVQLWIGTL*RGAKPLEKSWA Trigger: AGCCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATTGTACTTCACAGGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTAGACCAGGATGGGGGAGAAGCCCATaGTTTCTCCCCCTCCCTATA | + |
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Preference number: 3 (lower is better) Translates to: SLSFIRKGVHCSAGVRPGWGRSP*FLPLPI Trigger: TATAGGGAGGGGGAGAAACAATGGGCTTCTCCCCCA...TCCTGGTCTAACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | ATGGCACCCGGTCCTGCAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTGTTCCCCTCCTGGTCTaGCGGCCCTGGGCTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MAPGPAGPCELPAQRGSSVPLLV*RPWAGR Trigger: CCGGCCAGCCCAGGGCCGCCAGACCAGGAGGGGAAC...ACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | ATGGCACCCGGTCCTGCAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTCTGGTCTGGCGGCCCTaGGCTGGCCGGGGTCACATC | + |
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Preference number: 4 (lower is better) Translates to: MAPGPAGPCELPAQRGSSLVWRP*AGRGHI Trigger: GATGTGACCCCGGCCAGCCCAGGGCCGCCAGACCAG...ACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | TGCATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGCCGGCCCACGAGCCAGTTCCCCTCCTaGTCTGGCGGCCCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CMVGMQPQVHICLTSRPTSQFPS*SGGPGL Trigger: CAGCCCAGGGCCGCCAGACCAGGAGGGGAACTGGCT...CGTGGGCCGGCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | TGCATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGCCGGCCCACGGCGACGAGGAGCCGGTaGAGGAGAGGGACGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CMVGMQPQVHICLTSRPTATRSR*RRGTRW Trigger: CCACCTCGTCCCTCTCCTCCACCGGCTCCTCGTCGC...CGTGGGCCGGCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | CCGGTCCTGCAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCTGGTGCCGGCAGCTTTaGAACTCCCTGTGTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PVLQDHVNCPPSGVPVSCWCRQL*NSLCAL Trigger: CAGGGCACACAGGGAGTTTCAAAGCTGCCGGCACCA...GCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | TGCATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGCCGGCCCACGTCGCTGGTTTCCAGCTaGACGTTGCCGCGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CMVGMQPQVHICLTSRPTSLVSS*TLPRLL Trigger: CAGGAGCCGCGGCAACGTGCAGCTGGAAACCAGCGA...CGTGGGCCGGCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | AGGCAACTCCTGATGTACTACACCCCCTTAGTGGATGGCACCCGGTCCTGCAGGGTGCGACCCCGCAGCTaGGAGCCAGTTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RQLLMYYTPLVDGTRSCRVRPRS*EPVPLL Trigger: CAGGAGGGGAACTGGCTCCCAGCTGCGGGGTCGCAC...CCTGCAGGACCGGGTGCCATCCACTAAGGGGGTGTAGTACATCAGGAGTTGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | AATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGCTCCCCTGCGGCTGCTaGAGCGGCGACTGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: NYGSGPSGEVQSHLRRAGLPCGC*SGDCGA Trigger: TGCGCCGCAGTCGCCGCTGCAGCAGCCGCAGGGGAG...CCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | AATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGCACGCGGGAGCCCGTTaGGCACTTGTCCCCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: NYGSGPSGEVQSHLRRAGHAGAR*ALVPHA Trigger: GGCGTGGGGGACAAGTGCCCAACGGGCTCCCGCGTG...CCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | AGGCAACTCCTGATGTACTACACCCCCTTAGTGGATGGCACCCGGTCCTGCAGGTGTCCTTCCGCAGCTTaGGTCGTTCTCGGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RQLLMYYTPLVDGTRSCRCPSAA*VVLGLW Trigger: CCAAAGCCCGAGAACGACCCAAGCTGCGGAAGGACA...CCTGCAGGACCGGGTGCCATCCACTAAGGGGGTGTAGTACATCAGGAGTTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | AATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGTCCCAGGGCCTCCGATaGTCCAGGATCTGGCCATCG | + |
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Preference number: 4 (lower is better) Translates to: NYGSGPSGEVQSHLRRAGSQGLR*SRIWPS Trigger: CGATGGCCAGATCCTGGATCATCGGAGGCCCTGGGA...CCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCACGGCGCGCTGCGCATaGTCCTCCTCAGTAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTTARCA*SSSVGA Trigger: GGCACCTACTGAGGAGGAGCATGCGCAGCGCGCCGT...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCAGGAGAGGGACGAGGTaGAGAGGCGGCGTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTRRGTR*RGGVAA Trigger: AGCAGCCACGCCGCCTCTCCACCTCGTCCCTCTCCT...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCCCTCGCTTGTCACAGTaGGCTGAGGGATCACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTPRLSQ*AEGSPG Trigger: CCCCGGTGATCCCTCAGCTCACTGTGACAAGCGAGG...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAAGAGAGGCGGCGTGGCTaGTGCAGGTGCGACCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKERRRG*CRCDPA Trigger: TGCGGGGTCGCACCTGCAGCAGCCACGCCGCCTCTC...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | TGCATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGCCGGCCCACGACTTCTGCATCTCCTTaGATGAACTCCTCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: CMVGMQPQVHICLTSRPTTSASP*MNSSKT Trigger: TGTCTTTGAGGAGTTCATGCAAGGAGATGCAGAAGT...CGTGGGCCGGCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAAGGTGGAGAGGCGGCGTaGCTGCTGCAGGTGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKGGEAA*LLQVRP Trigger: GGGTCGCACCTGCAGCAGCCACGCCGCCTCTCCACC...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | ATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTGTAGCGTGGTTTGGTaGCGGCGCGCTGCGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: ISVIQLWETGLCGRQLLMCSVVW*RRAAHA Trigger: AGCATGCGCAGCGCGCCGTCACCAAACCACGCTACA...CATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | ATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGCGTTGCCGCGGCTCCTaGTCTCACTGTCGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ISVIQLWETGLCGRQLLMRCRGS*SHCRSA Trigger: TGCTGAGCGACAGTGAGAGCAGGAGCCGCGGCAACG...CATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | AATTATGGATCGGGACCCTCTGGAGAGGTGCAAAGCCACTTGAGAAGAGCTGGGGTCGTTCTCGGGCTTTaGTCAGCTCCTCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: NYGSGPSGEVQSHLRRAGVVLGL*SAPLPG Trigger: ACCTGGAAGAGGAGCTGACCAAAGCCCGAGAACGAC...CCCAGCTCTTCTCAAGTGGCTTTGCACCTCTCCAGAGGGTCCCGATCCATAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | CCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTATTTCCAGCTGCACGTTaGCGCGGCTCCTGCTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PPPYKLVSFSSGKQACVVFPAAR*RGSCSH Trigger: GTGAGAGCAGGAGCCGCGGCAACGTGCAGCTGGAAA...TACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCCGGATCTTCTGCCAGTaGCTTTTCTGCCCCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTRIFCQ*LFCPTS Trigger: GGACGTGGGGCAGAAAAGCCACTGGCAGAAGATCCG...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCCCATTGCATGTAGCGTaGTTTGGTGACGGCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTPLHVA*FGDGAL Trigger: CAGCGCGCCGTCACCAAACCACGCTACATGCAATGG...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTGAATCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTCTTGTCACAGTGAGCTaGGGGATCACCGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EAESLSFIRKGVHCSAGVLVTVS*GITGAG Trigger: CCCTGCCCCGGTGATCCCTCAGCTCACTGTGACAAG...AACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGATTCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | ATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGATGCACGAAGAGGAGTaGGCTGCCAATCACCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: ISVIQLWETGLCGRQLLMMHEEE*AANHLV Trigger: CACGAGGTGATTGGCAGCTCACTCCTCTTCGTGCAT...CATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACTCCTCCTCAGTAGGTaGCTCAGGGTCCACTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKLLLSR*LRVHCQ Trigger: CTGGCAGTGGACCCTGAGGCACCTACTGAGGAGGAG...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCTCTTGCCAAAATCGATaGGCCACACACCAGCACGAT | + |
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Preference number: 4 (lower is better) Translates to: IQLWETGLCGRQLLMYYTSCQNR*ATHQHD Trigger: ATCGTGCTGGTGTGTGGCTCATCGATTTTGGCAAGA...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAATGCCAGTGGCTTTTCTaGCCCACGTCCTCGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKCQWLF*PTSSLV Trigger: AACCAGCGAGGACGTGGGGCAGAAAAGCCACTGGCA...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTGAATCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTCGCTCGACTATGCCATaGAAGGCCGGCACACACCCA | + |
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Preference number: 4 (lower is better) Translates to: EAESLSFIRKGVHCSAGVRSTMP*KAGTHP Trigger: TGGGTGTGTGCCGGCCTTCCATGGCATAGTCGAGCG...AACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGATTCAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | TCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTAGACCAGGATGGCCAAGATGCCAATaGGATTGTCCAGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFIRKGVHCSAGVRPGWPRCQ*DCPAPA Trigger: TGCTGGGGCTGGACAATCTCATTGGCATCTTGGCCA...TCCTGGTCTAACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACTGCATCTCCTTGCATaGACTCCTCAAAGACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKLHLLA*TPQRHG Trigger: CCCGTGTCTTTGAGGAGTTCATGCAAGGAGATGCAG...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAAAGGGTATCCCGGATCTaGTGTAGGCGGTTCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKRVSRI*CRRFRY Trigger: GTATCTGAACCGCCTACAGCAGATCCGGGATACCCT...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTAGACCAGGACCTCCTCAGCACTTCTaGATCTCCTTGCATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFIRKGVHCSAGVRPGPPQHF*ISLHEL Trigger: GAGTTCATGCAAGGAGATGCAGAAGTGCTGAGGAGG...TCCTGGTCTAACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTGAATCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTATCCATCGGCTTTCTTaGTGCCCTCAATGCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAESLSFIRKGVHCSAGVIHRLS*CPQCES Trigger: GCTTTCGCATTGAGGGCATCAAGAAAGCCGATGGAT...AACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGATTCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 90 bp | GTGGAGGAGAGGGACGAGGTGGAGAGGCGGCGTGGCTGCTGCAGGTaGGACCCCGCAGCTGGGAGCCAGTTCCCCTCCTGGTCTGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: VEERDEVERRRGCCR*DPAAGSQFPSWSGG Trigger: GCCGCCAGACCAGGAGGGGAACTGGCTCCCAGCTGCGGGGTCGCACCTGCAGCAGCCACGCCGCCTCTCCACCTCGTCCCTCTCCTCCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | ATGGCACCCGGTCCTGCAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTGCACGCGGGAGCCCGTaGGGCACTTGTCCCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: MAPGPAGPCELPAQRGSSARGSP*GTCPPR Trigger: GCGTGGGGGACAAGTGCCCAACGGGCTCCCGCGTGC...ACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 90 bp | GCCCCACGTCCTCGCTGGTTTCCAGCTGCACGTTGCCGCGGCTCCTaGTCTCACTGTCGCTCAGCAGATCGTCCTCCGAGTCCTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: APRPRWFPAARCRGS*SHCRSADRPPSPRA Trigger: TGCTCGAGGACTCGGAGGACGATCTGCTGAGCGACAGTGAGAGCAGGAGCCGCGGCAACGTGCAGCTGGAAACCAGCGAGGACGTGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | CAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTCTCTTGCCGGCATGCACTGGTGCCGGCAGCTTaGAAACTCCCTGTGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QDHVNCPPSGVPVSCRHALVPAA*KLPVCP Trigger: AGGGCACACAGGGAGTTTCAAAGCTGCCGGCACCAG...TGCATGCCGGCAAGAGACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | ATGGCACCCGGTCCTGCAGGACCATGTGAACTGCCCGCCCAGCGGGGTTCCAGTGGGAGAGGCGTGGTCTaGCCAAAATCGATGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MAPGPAGPCELPAQRGSSGRGVV*PKSMSH Trigger: GTGGCTCATCGATTTTGGCAAGACCACGCCTCTCCC...ACTGGAACCCCGCTGGGCGGGCAGTTCACATGGTCCTGCAGGACCGGGTGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | AGGCAACTCCTGATGTACTACACCCCCTTAGTGGATGGCACCCGGTCCTGCAGGGTTTCCAGCTGCACGTaGCCGCGGCTCCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQLLMYYTPLVDGTRSCRVSSCT*PRLLLS Trigger: TGAGAGCAGGAGCCGCGGCAACGTGCAGCTGGAAAC...CCTGCAGGACCGGGTGCCATCCACTAAGGGGGTGTAGTACATCAGGAGTTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | TGCATGGTGGGGATGCAGCCACAGGTGCACATCTGTCTGACCAGCCGGCCCACGGTTCTGACACCCATCTaGCAGTCAAGCACACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CMVGMQPQVHICLTSRPTVLTPI*QSSTQG Trigger: GCCTTGTGTGCTTGACTGCAAGATGGGTGTCAGAAC...CGTGGGCCGGCTGGTCAGACAGATGTGCACCTGTGGCTGCATCCCCACCATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 90 bp | GCAGGTCCTGTAACTGCAAGTAGCTTTCACCATCCCGCTCGACTATaGCATGGAAGGCCGGCACACACCCACGCAGCACGTCAGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPVTASSFHHPARL*HGRPAHTHAARQPS Trigger: TGATGGCTGACGTGCTGCGTGGGTGTGTGCCGGCCTTCCATGGCATAGTCGAGCGGGATGGTGAAAGCTACTTGCAGTTACAGGACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | ATTCAGCTCTGGGAAACAGGCTTGTGTGGTAGGCAACTCCTGATGTACTACACCGAGCCCGTTGGGCACTaGTCCCCCACGCCGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQLWETGLCGRQLLMYYTEPVGH*SPTPLG Trigger: GCCAAGCGGCGTGGGGGACAAGTGCCCAACGGGCTC...GGTGTAGTACATCAGGAGTTGCCTACCACACAAGCCTGTTTCCCAGAGCTGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS TCA 90 bp | CCAGGATCTGGCCATCGGGGAGAGGCGTGGTCTTGCCAAAATCGATaGGCCACACACCAGCACGATGGCAATGGTCATGCACGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGSGHRGEAWSCQNR*ATHQHDGNGHARRG Trigger: TCCTCTTCGTGCATGACCATTGCCATCGTGCTGGTGTGTGGCTCATCGATTTTGGCAAGACCACGCCTCTCCCCGATGGCCAGATCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CCA 90 bp | GGACTCATGACAGGCAGATTGACCATGGTACGGATCTTCTGCCAGTaGCTTTTCTGCCCCACGTCCTCGCTGGTTTCCAGCTGCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLMTGRLTMVRIFCQ*LFCPTSSLVSSCTL Trigger: CAACGTGCAGCTGGAAACCAGCGAGGACGTGGGGCAGAAAAGCCACTGGCAGAAGATCCGTACCATGGTCAATCTGCCTGTCATGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS TCA 90 bp | GAGCCACACACCAGCACGATGGCAATGGTCATGCACGAAGAGGAGTaGGCTGCCAATCACCTCGTGCCGTCTAAAGAAATCAGAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPHTSTMAMVMHEEE*AANHLVPSKEIRDL Trigger: GAGATCTCTGATTTCTTTAGACGGCACGAGGTGATTGGCAGCTCACTCCTCTTCGTGCATGACCATTGCCATCGTGCTGGTGTGTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 90 bp | TCGTGCCGTCTAAAGAAATCAGAGATCTCCAGGGTATCCCGGATCTaGTGTAGGCGGTTCAGATACCTCCTCAGCACTTCTGCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCRLKKSEISRVSRI*CRRFRYLLSTSASP Trigger: AGGAGATGCAGAAGTGCTGAGGAGGTATCTGAACCGCCTACAGCAGATCCGGGATACCCTGGAGATCTCTGATTTCTTTAGACGGCACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAAGGTCGTTCTCGGGCTTaGGTCAGCTCCTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKGRSRA*VSSSSR Trigger: CCTGGAAGAGGAGCTGACCAAAGCCCGAGAACGACC...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGTTTTATTAGGAAGGGTGTCCACTGTAGTGCAGGAGTTAGACCAGGAATGTCCTTCCGCAGCTaGGGTCGTTCTCGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSFIRKGVHCSAGVRPGMSFRS*GRSRAL Trigger: CAAAGCCCGAGAACGACCCAAGCTGCGGAAGGACAT...TCCTGGTCTAACTCCTGCACTACAGTGGACACCCTTCCTAATAAAACTCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | CCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACAGGCTTGTGTGGTACACTTCTGCATCTCCTaGCATGAACTCCTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPPYKLVSFSSGKQACVVHFCIS*HELLKD Trigger: GTCTTTGAGGAGTTCATGCAAGGAGATGCAGAAGTG...TACCACACAAGCCTGTTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 90 bp | ACTTCTGCATCTCCTTGCATGAACTCCTCAAAGACACGGGTCACTTaGTCTCGGCTTCGTGTAGTTTTGAAATCAGTACTGCAAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSASPCMNSSKTRVT*SRLRVVLKSVLQDP Trigger: TGGATCTTGCAGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTTTGAGGAGTTCATGCAAGGAGATGCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCATTGTTTCTCCCCCTCCCTATAAATTAGTGTCATTCAGCTCTGGGAAACGGCTTCGTGTAGTTTaGAAATCAGTACTGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KPIVSPPPYKLVSFSSGKRLRVV*KSVLQD Trigger: ATCTTGCAGTACTGATTTCAAAACTACACGAAGCCG...TTTCCCAGAGCTGAATGACACTAATTTATAGGGAGGGGGAGAAACAATGGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 72 bp | GGCCCGGGGCTCCCCTGCGGCTGCTGCAGCGGCGACTaGGGCGCAGCGCGCTTCGAAGAGCAGGCGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGLPCGCCSGD*GAARFEEQAQL Trigger: GAGCTGCGCCTGCTCTTCGAAGCGCGCTGCGCCGCAGTCGCCGCTGCAGCAGCCGCAGGGGAGCCCCGGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CCA 72 bp | GAGGCGGCGTGGCTGCTGCAGGTGCGACCCCGCAGCTaGGAGCCAGTTCCCCTCCTGGTCTGGCGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EAAWLLQVRPRS*EPVPLLVWRPW Trigger: CCAGGGCCGCCAGACCAGGAGGGGAACTGGCTCCCAGCTGCGGGGTCGCACCTGCAGCAGCCACGCCGCCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CCA 72 bp | AGCTGGGAGCCAGTTCCCCTCCTGGTCTGGCGGCCCTaGGCTGGCCGGGGTCACATCCTCCTCGCTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SWEPVPLLVWRP*AGRGHILLACH Trigger: GTGACAAGCGAGGAGGATGTGACCCCGGCCAGCCCAGGGCCGCCAGACCAGGAGGGGAACTGGCTCCCAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 72 bp | CCTCGCTGGTTTCCAGCTGCACGTTGCCGCGGCTCCTaGTCTCACTGTCGCTCAGCAGATCGTCCTCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRWFPAARCRGS*SHCRSADRPPS Trigger: ACTCGGAGGACGATCTGCTGAGCGACAGTGAGAGCAGGAGCCGCGGCAACGTGCAGCTGGAAACCAGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 72 bp | TCTGCCCCACGTCCTCGCTGGTTTCCAGCTGCACGTTaGCGCGGCTCCTGCTCTCACTGTCGCTCAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SAPRPRWFPAAR*RGSCSHCRSAD Trigger: ATCTGCTGAGCGACAGTGAGAGCAGGAGCCGCGGCAACGTGCAGCTGGAAACCAGCGAGGACGTGGGGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 72 bp | CTGCGTTTCAGGATCAGGCCACTGGTGCCGGCAGCTTaGAAACTCCCTGTGTGCCCTGCTAACTGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRFRIRPLVPAA*KLPVCPANCTQ Trigger: CTGGGTGCAGTTAGCAGGGCACACAGGGAGTTTCAAAGCTGCCGGCACCAGTGGCCTGATCCTGAAACGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS TCA 72 bp | GGCCATCGGGGAGAGGCGTGGTCTTGCCAAAATCGATaGGCCACACACCAGCACGATGGCAATGGTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: GHRGEAWSCQNR*ATHQHDGNGHA Trigger: TGCATGACCATTGCCATCGTGCTGGTGTGTGGCTCATCGATTTTGGCAAGACCACGCCTCTCCCCGATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS TCA 72 bp | ACCAGCACGATGGCAATGGTCATGCACGAAGAGGAGTaGGCTGCCAATCACCTCGTGCCGTCTAAAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TSTMAMVMHEEE*AANHLVPSKEI Trigger: GATTTCTTTAGACGGCACGAGGTGATTGGCAGCTCACTCCTCTTCGTGCATGACCATTGCCATCGTGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 72 bp | GCGGTTCAGATACCTCCTCAGCACTTCTGCATCTCCTaGCATGAACTCCTCAAAGACACGGGTCACTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVQIPPQHFCIS*HELLKDTGHLL Trigger: GAGCAAGTGACCCGTGTCTTTGAGGAGTTCATGCAAGGAGATGCAGAAGTGCTGAGGAGGTATCTGAACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 72 bp | CTAAAGAAATCAGAGATCTCCAGGGTATCCCGGATCTaGTGTAGGCGGTTCAGATACCTCCTCAGCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKKSEISRVSRI*CRRFRYLLSTS Trigger: AGAAGTGCTGAGGAGGTATCTGAACCGCCTACAGCAGATCCGGGATACCCTGGAGATCTCTGATTTCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 90 bp | CTTCGTGTAGTTTTGAAATCAGTACTGCAAGATCCATCGGCTTTCTaGATGCCCTCAATGCGAAAGCCGAGTGTAGTGCTGGAGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRVVLKSVLQDPSAF*MPSMRKPSVVLELM Trigger: CATCAGCTCCAGCACTACACTCGGCTTTCGCATTGAGGGCATCAAGAAAGCCGATGGATCTTGCAGTACTGATTTCAAAACTACACGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 90 bp | AACTCCTCAAAGACACGGGTCACTTGCTCTCGGCTTCGTGTAGTTTaGAAATCAGTACTGCAAGATCCATCGGCTTTCTTGATGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NSSKTRVTCSRLRVV*KSVLQDPSAFLMPS Trigger: TGAGGGCATCAAGAAAGCCGATGGATCTTGCAGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTTTGAGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 90 bp | CACTTCTGCATCTCCTTGCATGAACTCCTCAAAGACACGGGTCACTaGCTCTCGGCTTCGTGTAGTTTTGAAATCAGTACTGCAAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: HFCISLHELLKDTGH*LSASCSFEISTARS Trigger: GGATCTTGCAGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTTTGAGGAGTTCATGCAAGGAGATGCAGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS GCA 72 bp | TCTCCTTGCATGAACTCCTCAAAGACACGGGTCACTTaGTCTCGGCTTCGTGTAGTTTTGAAATCAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCMNSSKTRVT*SRLRVVLKSVL Trigger: CAGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTTTGAGGAGTTCATGCAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 72 bp | GTTTTGAAATCAGTACTGCAAGATCCATCGGCTTTCTaGATGCCCTCAATGCGAAAGCCGAGTGTAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLKSVLQDPSAF*MPSMRKPSVVL Trigger: CAGCACTACACTCGGCTTTCGCATTGAGGGCATCAAGAAAGCCGATGGATCTTGCAGTACTGATTTCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 72 bp | AAGACACGGGTCACTTGCTCTCGGCTTCGTGTAGTTTaGAAATCAGTACTGCAAGATCCATCGGCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTRVTCSRLRVV*KSVLQDPSAFL Trigger: CAAGAAAGCCGATGGATCTTGCAGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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| CDS CAA 72 bp | ATCTCCTTGCATGAACTCCTCAAAGACACGGGTCACTaGCTCTCGGCTTCGTGTAGTTTTGAAATCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: ISLHELLKDTGH*LSASCSFEIST Trigger: AGTACTGATTTCAAAACTACACGAAGCCGAGAGCAAGTGACCCGTGTCTTTGAGGAGTTCATGCAAGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028758.8 |
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