Pregenerated sensors for ITPK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057963Ensembl transcript IDs: ENSMUST00000046518.12
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCCCTTGGGGGCTTGCCTGGTGCTCAGTGCAAGGGACTCGCTATaGACACAGCAGGAAGGAGCTGGGCCTTGCTGTTCCAGGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TPLGACLVLSARDSL*TQQEGAGPCCSRRG Trigger: GCCCCTCCTGGAACAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAAGCCCCCAAGGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 90 bp | GGTGCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTaGGCCTTGCTGTTCCAGGAGGGGCTGTCGCGTGTGAACAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GAQCKGLAMNTAGRS*ALLFQEGLSRVNRS Trigger: GCTCCTGTTCACACGCGACAGCCCCTCCTGGAACAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR GCA 90 bp | CACCCACAGGAAGCTCCTTTCCCTTCCTACAACCCAGATCCTCCATaGAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: HPQEAPFPSYNPDPP*RAPEGASTASLALE Trigger: CTCCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGGTTGTAGGAAGGGAAAGGAGCTTCCTGTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 90 bp | AACTGGGAAAACCGTTCGTCCTTCGCCTGCTTAGCTGCAACAGCCTaGCCAGATATGGGCTTCCTTCCTCGGTGCCCAGAGCCTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NWENRSSFACLAATA*PDMGFLPRCPEPGP Trigger: TGGGCCAGGCTCTGGGCACCGAGGAAGGAAGCCCATATCTGGCCAGGCTGTTGCAGCTAAGCAGGCGAAGGACGAACGGTTTTCCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR TCA 90 bp | GTCGCGTGTGAACAGGAGCAGCCCTGTGGGTGGTCTCCTCTCACCTaGAAAGAGGGACCGGATGATGACATGAGGAAGCAGAGATCCTCG | + |
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Preference number: 1 (lower is better) Translates to: VACEQEQPCGWSPLT*KEGPDDDMRKQRSS Trigger: CGAGGATCTCTGCTTCCTCATGTCATCATCCGGTCCCTCTTTTCAGGTGAGAGGAGACCACCCACAGGGCTGCTCCTGTTCACACGCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 90 bp | CAAGAGGCGGCCACGCTTCCCACCCCCTGTTTTCAGGGTCAGGCCTaGGAAGGTGACTTACAGACATCAATCAGTTCAACACTCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: QEAATLPTPCFQGQA*EGDLQTSISSTLRS Trigger: GGACCTGAGTGTTGAACTGATTGATGTCTGTAAGTCACCTTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGAAGCGTGGCCGCCTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 90 bp | ATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCTaGACTCCTAGTCAGATGGCTCCTTCCTGGATCTCAGTGAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: ICWKSQGKSWVLADS*TPSQMAPSWISVSN Trigger: ATTGCTCACTGAGATCCAGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 90 bp | AGGCCTTCAGTTCTCTGTTTCAGGAGCCACCCTGAAGAGATGAGGTaGTGGAGGCCTGAAGACTCACGGAATGATCTGTTGGAAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: RPSVLCFRSHPEEMR*WRPEDSRNDLLEVP Trigger: TGGGACTTCCAACAGATCATTCCGTGAGTCTTCAGGCCTCCACCACCTCATCTCTTCAGGGTGGCTCCTGAAACAGAGAACTGAAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCGCCACCCTGAAGAGATaGGGTGGTGGAGGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PQGSFPVGFGASGWSASCATLKR*GGGGLK Trigger: CTTCAGGCCTCCACCACCTCATCTCTTCAGGGTGGC...GCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCGAAGGAGCTGGGCCTTaGTGTTCCAGGAGGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQGSFPVGFGASGWSASCEGAGP*CSRRGC Trigger: ACAGCCCCTCCTGGAACAGCAAGGCCCAGCTCCTTC...GCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GCTCCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTCGGTGCCCAGAGCCTaGCCCACAACAGCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: APQGSFPVGFGASGWSASSVPRA*PTTAMK Trigger: CTTCATGGCTGTTGTGGGCCAGGCTCTGGGCACCGA...GCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGGGTGAGGTCTGGGTGTaGGCAGGTGTGAAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GSTGVLSCGLWGQWVVCQGEVWV*AGVKRR Trigger: CCTCCTCTTCACACCTGCCCACACCCAGACCTCACC...CTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCTGTCGAGGCTGGGCCACTTaGTGTTCTGCTCTGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QGSFPVGFGASGWSASCCRGWAT*CSALSP Trigger: GGGAGACAGAGCAGAACATCAAGTGGCCCAGCCTCG...ACAGCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GTGCAAGAGGCGGCCACGCTTCCCACCCCCTGTTTTCAGGGTCAGGCCTGGGAAGAGCTGCTGGCCCAGTaGGCATTTTCCACGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VQEAATLPTPCFQGQAWEELLAQ*AFSTLC Trigger: GCAGAGCGTGGAAAATGCCCACTGGGCCAGCAGCTC...TTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGAAGCGTGGCCGCCTCTTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGGCATTTTCCACGCTCTaGCCCTCTGGGTCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QILHAELPRGRLLLPWLWAFSTL*PSGSWA Trigger: AGCCCAGGACCCAGAGGGGCAGAGCGTGGAAAATGC...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGGTTCCCATGTGGAGCTaGTGGCCCAGTGGGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: GSTGVLSCGLWGQWVVCQVPMWS*WPSGHF Trigger: AAAATGCCCACTGGGCCAGCAGCTCCACATGGGAAC...CTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCCTTGCTGTTCCAGGAGGGGCTGTCGCGTGTGAACAGGAGCAGCCCTGTTCCCAGGGTAAATCCTaGGTCCTGGCAGACTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LGLAVPGGAVACEQEQPCSQGKS*VLADSW Trigger: CCAGGAGTCTGCCAGGACCCAGGATTTACCCTGGGA...ACAGGGCTGCTCCTGTTCACACGCGACAGCCCCTCCTGGAACAGCAAGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CAA 90 bp | CAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGGCCTaGCTGTTCCAGGAGGGGCTGTCGCGTGTGAACAGGAGCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QCKGLAMNTAGRSWA*LFQEGLSRVNRSSP Trigger: AGGGCTGCTCCTGTTCACACGCGACAGCCCCTCCTGGAACAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCGACCGGATGATGACATaGGGAAGCAGAGATCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: PQGSFPVGFGASGWSASCDRMMT*GSRDPR Trigger: ACGAGGATCTCTGCTTCCTCATGTCATCATCCGGTC...GCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTAGTAGTGTTCCCATGTaGAGCTGCTGGCCCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TQILHAELPRGRLLLPWLSSVPM*SCWPSG Trigger: CCCACTGGGCCAGCAGCTCCACATGGGAACACTACT...AAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTGGAGGAGAGCACATCTaGGACAAGAGGGAGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TQILHAELPRGRLLLPWLGGEHI*DKREGE Trigger: CTCACCCTCCCTCTTGTCCCAGATGTGCTCTCCTCC...AAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGGGACTCCTAGTCAGATaGCTCCTTCCTGGATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GSTGVLSCGLWGQWVVCQGLLVR*LLPGSQ Trigger: CTGAGATCCAGGAAGGAGCCATCTGACTAGGAGTCC...CTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGGCCTTGCTGCTCAGTGAGGACCTCTaGACAGCAGGAGTCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: AQCKGLAMNTAGRSWALLLSEDL*TAGVRR Trigger: CCGCCTGACTCCTGCTGTGCAGAGGTCCTCACTGAG...CAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCCTTGCTGTTCCAGGAGGGGCTGTCGCGTGTGAACAGGAGCAGCCCTGTCTTCGCCTGCTTAGCTaGAACAGCCTGGCCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: LGLAVPGGAVACEQEQPCLRLLS*NSLARY Trigger: ATATCTGGCCAGGCTGTTGCAGCTAAGCAGGCGAAG...ACAGGGCTGCTCCTGTTCACACGCGACAGCCCCTCCTGGAACAGCAAGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGTCCTGTAAACGTGGTTAGTCCTGGGGCTCTGCTTCCGAGGAAGCCATGGGGGCTTGCCTGGTaGTCAGTGCAAGGGACTCGC | + |
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Preference number: 2 (lower is better) Translates to: HSGPVNVVSPGALLPRKPWGLAW*SVQGTR Trigger: GCGAGTCCCTTGCACTGAGCACCAGGCAAGCCCCCA...TGGCTTCCTCGGAAGCAGAGCCCCAGGACTAACCACGTTTACAGGACCTGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | CACGGAATGATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCGGCTTCCTTCCTCGGTaGCCAGAGCCTGGCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: HGMICWKSQGKSWVLADSGFLPR*PEPGPQ Trigger: TTGTGGGCCAGGCTCTGGGCACCGAGGAAGGAAGCC...GGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGATCATTCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAGAGGCGGCCACGCTTCCCACCCCCTGTTTTCAGGGTCAGGCCTGGGAATATTCCACGAGCCAGTaGAGACTAGCAATAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VQEAATLPTPCFQGQAWEYSTSQ*RLAIAS Trigger: ACTGGCTATTGCTAGTCTTCACTGGCTCGTGGAATA...TTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGAAGCGTGGCCGCCTCTTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTGGTGCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGGGCCCACAACAGCCATaGAGACAGACATGCACACTC | + |
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Preference number: 2 (lower is better) Translates to: LPGAQCKGLAMNTAGRSWGPQQP*RQTCTL Trigger: GAGTGTGCATGTCTGTCTTCATGGCTGTTGTGGGCC...CCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTCCCATGTGGAGCTGCTaGCCCAGTGGGCATTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VNPGSWQTPGLLVRWLLPPMWSC*PSGHFP Trigger: TGGAAAATGCCCACTGGGCCAGCAGCTCCACATGGG...AGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGGACCGGATGATGACATGAGGAAGCAGAGATCCTCGTGGGCTAGACCACTAGAAGAGGAGGGGAACTaGGAAAACCGTTCGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: EGPDDDMRKQRSSWARPLEEEGN*ENRSSF Trigger: GAAGGACGAACGGTTTTCCCAGTTCCCCTCCTCTTC...TAGTGGTCTAGCCCACGAGGATCTCTGCTTCCTCATGTCATCATCCGGTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | CACGGAATGATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCACTAGCAATAGCCAGTaGGCTTCGGCTACACCCACA | + |
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Preference number: 2 (lower is better) Translates to: HGMICWKSQGKSWVLADSTSNSQ*ASATPT Trigger: TGTGGGTGTAGCCGAAGCCCACTGGCTATTGCTAGT...GGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGATCATTCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGGACCGGATGATGACATGAGGAAGCAGAGATCCTCGTGGGCTAGACCACTACAGATGGCTCCTTCCTaGATCTCAGTGAGCAATAGG | + |
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Preference number: 2 (lower is better) Translates to: EGPDDDMRKQRSSWARPLQMAPS*ISVSNR Trigger: CCTATTGCTCACTGAGATCCAGGAAGGAGCCATCTG...TAGTGGTCTAGCCCACGAGGATCTCTGCTTCCTCATGTCATCATCCGGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR GCA 90 bp | GTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTATGCACACTCACCCTTaGCATGACAAACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: VNPGSWQTPGLLVRWLLPMHTHP*HDKHTH Trigger: GTGTGTGTGTTTGTCATGGCAAGGGTGAGTGTGCAT...AGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGCCTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTACCTTGGGGGCTTGCCTaGTGCTCAGTGCAAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LVAFPGLLLLVYSILLDLPWGLA*CSVQGT Trigger: AGTCCCTTGCACTGAGCACCAGGCAAGCCCCCAAGG...TAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAGGCCACTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGGCCTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTAGCAAGGGACTCGCTATaGACACAGCAGGAAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LVAFPGLLLLVYSILLDLARDSL*TQQEGA Trigger: AGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGC...TAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAGGCCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCCTGGGAAGGTGACTTACAGACATCAATCAGTTCAACACTCAGGTCCTTTAGCTGCAACAGCCTaGCCAGATATGGGCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VRPGKVTYRHQSVQHSGPLAATA*PDMGFL Trigger: AAGGAAGCCCATATCTGGCCAGGCTGTTGCAGCTAA...AGGACCTGAGTGTTGAACTGATTGATGTCTGTAAGTCACCTTCCCAGGCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGCCTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTACACGGAATGATCTGTTaGAAGTCCCAGGGTAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LVAFPGLLLLVYSILLDLHGMIC*KSQGKS Trigger: GGATTTACCCTGGGACTTCCAACAGATCATTCCGTG...TAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAGGCCACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR GCA 72 bp | CCGAGGAAGCCAATCGGCTTCTCCTTGCCCAAAGGATaGCCCTGCATGGCCCTTAGTGGCCTTCCCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PRKPIGFSLPKG*PCMALSGLPRA Trigger: AGCCCTGGGAAGGCCACTAAGGGCCATGCAGGGGCATCCTTTGGGCAAGGAGAAGCCGATTGGCTTCCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR GCA 72 bp | GGGCTCTGCTTCCGAGGAAGCCAATCGGCTTCTCCTTaGCCAAAGGATGCCCCTGCATGGCCCTTAGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GLCFRGSQSASP*PKDAPAWPLVA Trigger: GGCCACTAAGGGCCATGCAGGGGCATCCTTTGGGCAAGGAGAAGCCGATTGGCTTCCTCGGAAGCAGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR-3UTR CAA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGTCGAGGCTGGGCCACTaGATGTTCTGCTCTGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QILHAELPRGRLLLPWLWSRLGH*MFCSVS Trigger: GGAGACAGAGCAGAACATCAAGTGGCCCAGCCTCGA...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR TCA 72 bp | GGGGCTTGCCTGGTGCTCAGTGCAAGGGACTCGCTATaGACACAGCAGGAAGGAGCTGGGCCTTGCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: GACLVLSARDSL*TQQEGAGPCCS Trigger: GGAACAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 72 bp | TGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTaGGCCTTGCTGTTCCAGGAGGGGCTGTCGCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CKGLAMNTAGRS*ALLFQEGLSRV Trigger: CACACGCGACAGCCCCTCCTGGAACAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR GCA 72 bp | GAAGCTCCTTTCCCTTCCTACAACCCAGATCCTCCATaGAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: EAPFPSYNPDPP*RAPEGASTASL Trigger: CAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGGTTGTAGGAAGGGAAAGGAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR GCA 72 bp | GTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTaGCAGCTGCTGTGGGGTCAGAGTGAGTCTGAAATG | + |
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Preference number: 3 (lower is better) Translates to: VLSCGLWGQWVV*QLLWGQSESEM Trigger: CATTTCAGACTCACTCTGACCCCACAGCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR CCA 72 bp | CAATCGGCTTCTCCTTGCCCAAAGGATGCCCCTGCATaGCCCTTAGTGGCCTTCCCAGGGCTGCTGCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: QSASPCPKDAPA*PLVAFPGLLLL Trigger: TAGAAGCAGCAGCCCTGGGAAGGCCACTAAGGGCCATGCAGGGGCATCCTTTGGGCAAGGAGAAGCCGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR TCA 72 bp | CTTCCTCGGTGCCCAGAGCCTGGCCCACAACAGCCATaGAGACAGACATGCACACTCACCCTTGCCATGACA | + |
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Preference number: 3 (lower is better) Translates to: LPRCPEPGPQQP*RQTCTLTLAMT Trigger: TGTCATGGCAAGGGTGAGTGTGCATGTCTGTCTTCATGGCTGTTGTGGGCCAGGCTCTGGGCACCGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| 3UTR TCA 72 bp | GAACAGGAGCAGCCCTGTGGGTGGTCTCCTCTCACCTaGAAAGAGGGACCGGATGATGACATGAGGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EQEQPCGWSPLT*KEGPDDDMRKQ Trigger: CTGCTTCCTCATGTCATCATCCGGTCCCTCTTTTCAGGTGAGAGGAGACCACCCACAGGGCTGCTCCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR GCA 72 bp | GAACTGGGAAAACCGTTCGTCCTTCGCCTGCTTAGCTaGAACAGCCTGGCCAGATATGGGCTTCCTTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: ELGKPFVLRLLS*NSLARYGLPSS Trigger: CGAGGAAGGAAGCCCATATCTGGCCAGGCTGTTGCAGCTAAGCAGGCGAAGGACGAACGGTTTTCCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR CCA 72 bp | CCAGGAATTCTTAGTAGTGTTCCCATGTGGAGCTGCTaGCCCAGTGGGCATTTTCCACGCTCTGCCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGILSSVPMWSC*PSGHFPRSAPL Trigger: CAGAGGGGCAGAGCGTGGAAAATGCCCACTGGGCCAGCAGCTCCACATGGGAACACTACTAAGAATTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR CCA 72 bp | GCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTaGATCTCAGTGAGCAATAGGGTCAGGGTAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ADSWTPSQMAPS*ISVSNRVRVGW Trigger: CCACCCTACCCTGACCCTATTGCTCACTGAGATCCAGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR CCA 72 bp | AAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCTaGACTCCTAGTCAGATGGCTCCTTCCTGGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KSQGKSWVLADS*TPSQMAPSWIS Trigger: TGAGATCCAGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR CCA 72 bp | TCCTGGATCTCAGTGAGCAATAGGGTCAGGGTAGGGTaGATAGTGGCCTGCTGTATTCCACGAGCCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SWISVSNRVRVG*IVACCIPRASE Trigger: TTCACTGGCTCGTGGAATACAGCAGGCCACTATCCACCCTACCCTGACCCTATTGCTCACTGAGATCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR CCA 72 bp | GCCACGCTTCCCACCCCCTGTTTTCAGGGTCAGGCCTaGGAAGGTGACTTACAGACATCAATCAGTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: ATLPTPCFQGQA*EGDLQTSISST Trigger: TGTTGAACTGATTGATGTCTGTAAGTCACCTTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGAAGCGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR TCA 72 bp | CTTCAGTTCTCTGTTTCAGGAGCCACCCTGAAGAGATaGGGTGGTGGAGGCCTGAAGACTCACGGAATGATC | + |
|
Preference number: 3 (lower is better) Translates to: LQFSVSGATLKR*GGGGLKTHGMI Trigger: GATCATTCCGTGAGTCTTCAGGCCTCCACCACCTCATCTCTTCAGGGTGGCTCCTGAAACAGAGAACTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR TCA 72 bp | TCCCACCCCCTGTTTTCAGGGTCAGGCCTGGGAAGGTaGCTTACAGACATCAATCAGTTCAACACTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SHPLFSGSGLGR*LTDINQFNTQV Trigger: GACCTGAGTGTTGAACTGATTGATGTCTGTAAGTCACCTTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTAAGGACAACCATTCAGACCTAGTGTaGAGAACACAAGCGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LPRAAASSVLYLIRPKDNHSDLV*RTQACV Trigger: TACACACGCTTGTGTTCTCAACACTAGGTCTGAATG...GTTGTCCTTAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCTGTCCTGGCCCTTCATGCTaGCACAGCAGCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSFPVGFGASGWSASCCPGPSC*HSSQGW Trigger: CCAGCCCTGGCTGCTGTGGCAGCATGAAGGGCCAGG...ACAGCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGGTGCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGGACACTCCCAGCGCCTaGCGCAGAGCCCGGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGAQCKGLAMNTAGRSWDTPSA*RRARDS Trigger: GCTGTCCCGGGCTCTGCGGCAGGCGCTGGGAGTGTC...CCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGTGTCCTGGCCCTTCATaGTGCCACAGCAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QILHAELPRGRLLLPWLWCPGPS*CHSSQG Trigger: GCCCTGGCTGCTGTGGCAGCATGAAGGGCCAGGACA...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR TCA 90 bp | CCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCCTCTGGTTTTGCAAATaGAGGGGAAGGCCAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PQGSFPVGFGASGWSASCLWFCK*RGRPGR Trigger: ACGGCCTGGCCTTCCCCTTCATTTGCAAAACCAGAG...GCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGAGGCGGCCACGCTTCCCACCCCCTGTTTTCAGGGTCAGGCCTGGGAAGTCAATTCCAAACAGTaGCACTCCCAGCGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VQEAATLPTPCFQGQAWEVNSKQ*HSQRLP Trigger: CGGCAGGCGCTGGGAGTGTCACTGTTTGGAATTGAC...TTCCCAGGCCTGACCCTGAAAACAGGGGGTGGGAAGCGTGGCCGCCTCTTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | CCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTAAGGCCAGGCCGTTCTaGTCCAGCAGCCTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSSMQSSRGGVYCFPGFKARPF*SSSLMV Trigger: CACCATGAGGCTGCTGGAGCAGAACGGCCTGGCCTT...AAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | GTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTGCTCCCCAGCCAGGCTaGCTGCCGGTTCCGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNPGSWQTPGLLVRWLLPAPQPG*LPVPPG Trigger: TCCTGGCGGAACCGGCAGGCAGCCTGGCTGGGGAGC...AGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGGTGCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGAGCCAGGGCTGGCACTaGACGTCCGCTCCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGAQCKGLAMNTAGRSWSQGWH*TSAPQP Trigger: TGGCTGGGGAGCGGACGTGCAGTGCCAGCCCTGGCT...CCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCGCTGTCATTCTGGTCTaGCTCGAGGATGACATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQGSFPVGFGASGWSASCAVILV*LEDDIG Trigger: ACCGATGTCATCCTCGAGGCAGACCAGAATGACAGC...GCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTCCTTTCCTGTGGGCTTTGGGGCCAGTGGGTGGTCTGCCAGCTGCTGTGGGGATCCAAGACGATaGTCTCAGGGTGAGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSFPVGFGASGWSASCCGDPRR*SQGEHR Trigger: TCGATGCTCACCCTGAGACCATCGTCTTGGATCCCC...ACAGCAGCTGGCAGACCACCCACTGGCCCCAAAGCCCACAGGAAAGGACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGACTGTGAGGAAGCCTTaGTGGCCAGAGAGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QILHAELPRGRLLLPWLWTVRKP*WPERPH Trigger: GTGTGGCCTCTCTGGCCACCAAGGCTTCCTCACAGT...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGGCCTTGCTGCTATCCCTCGCTTCCTaGACAGCTCCGCGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQCKGLAMNTAGRSWALLLSLAS*TAPRRP Trigger: AGGCCTTCGCGGAGCTGTGCAGGAAGCGAGGGATAG...CAGCAAGGCCCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | GTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTACGTCCAGGGGGCCCTaGTCCTCAATCGGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNPGSWQTPGLLVRWLLPTSRGP*SSIGLL Trigger: CAGCAGACCGATTGAGGAGCAGGGCCCCCTGGACGT...AGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | ACCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTGACTGGCTGTCATTCTaGTCTGCCTCGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TQILHAELPRGRLLLPWLDWLSF*SASRMT Trigger: TGTCATCCTCGAGGCAGACCAGAATGACAGCCAGTC...AAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGTACTCTTGGAACCTGTaGACCAATTCCAGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QILHAELPRGRLLLPWLWYSWNL*TNSRDW Trigger: CCAGTCCCTGGAATTGGTGCACAGGTTCCAAGAGTA...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | CCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGCATCGATGTACTCTTaGAACCTGTGCACCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSMQSSRGGVYCFPGFASMYS*NLCTNS Trigger: GGAATTGGTGCACAGGTTCCAAGAGTACATCGATGC...AAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | GTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCTAGTCAGATGGCTCCTTCCTAGTGCTGCTGGAAGCTaGGTGATACGCCAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNPGSWQTPGLLVRWLLPSAAGS*VIRQWC Trigger: GCACCACTGGCGTATCACCCAGCTTCCAGCAGCACT...AGGAAGGAGCCATCTGACTAGGAGTCCAGGAGTCTGCCAGGACCCAGGATTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | CACGGAATGATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCGCCACACAGTGCTGCTaGAAGCTGGGTGATACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGMICWKSQGKSWVLADSATQCC*KLGDTP Trigger: TGGCGTATCACCCAGCTTCCAGCAGCACTGTGTGGC...GGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGATCATTCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR TCA 90 bp | CACTCAGGTCCTGTAAACGTGGTTAGTCCTGGGGCTCTGCTTCCGAGGAAGCCATCTTGTCCAGCTCAGTaGGGACTGATGAAGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSGPVNVVSPGALLPRKPSCPAQ*GLMKTP Trigger: CGGAGTCTTCATCAGTCCTCACTGAGCTGGACAAGA...TGGCTTCCTCGGAAGCAGAGCCCCAGGACTAACCACGTTTACAGGACCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | GAGGGACCGGATGATGACATGAGGAAGCAGAGATCCTCGTGGGCTAGACCACTAGGCCTTGCAGAACTGTaGCAATGTGGTTCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGPDDDMRKQRSSWARPLGLAEL*QCGSGG Trigger: ACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCC...TAGTGGTCTAGCCCACGAGGATCTCTGCTTCCTCATGTCATCATCCGGTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | TTGCCTGGTGCTCAGTGCAAGGGACTCGCTATGAACACAGCAGGAAGGAGCTGGAGAACTGTGGCAATGTaGTTCAGGAGGTCGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGAQCKGLAMNTAGRSWRTVAM*FRRSVK Trigger: CTTTACCGACCTCCTGAACCACATTGCCACAGTTCT...CCAGCTCCTTCCTGCTGTGTTCATAGCGAGTCCCTTGCACTGAGCACCAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR GCA 90 bp | ACACTCACCCTTGCCATGACAAACACACACACACACACACACACACACACACACAGAGAGGCCACACAGTaGTGCTGGAAGCTGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLTLAMTNTHTHTHTHTHREATQ*CWKLGD Trigger: ATCACCCAGCTTCCAGCAGCACTGTGTGGCCTCTCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTCATGGCAAGGGTGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR TCA 90 bp | CACGGAATGATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCACACATTGTGGCTGTTaGAGAAGATGGACTCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGMICWKSQGKSWVLADSTHCGC*RRWTHD Trigger: ATCGTGAGTCCATCTTCTTCAACAGCCACAATGTGT...GGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGATCATTCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTGGCCTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTAAGCTCCGCGAAGGCCTaGAAATTGAGCTTCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVAFPGLLLLVYSILLDLSSAKA*KLSFLT Trigger: AGTCAAGAAGCTCAATTTCCAGGCCTTCGCGGAGCT...TAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAGGCCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | CACAGCAGCCAGGGCTGGCACTGCACGTCCGCTCCCCAGCCAGGCTaGCTGCCGGTTCCGCCAGGAGCCTGTTGTGCCTTAGCGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSQGWHCTSAPQPG*LPVPPGACCALAGP Trigger: TGGCCCCGCTAAGGCACAACAGGCTCCTGGCGGAACCGGCAGGCAGCCTGGCTGGGGAGCGGACGTGCAGTGCCAGCCCTGGCTGCTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | TGCTGGAAGCTGGGTGATACGCCAGTGGTGCAGCCAAGTCTCTGGTaGGGCAGCTTGGCGGAAGCACCAGCGCCCATGTTGCCTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CWKLGDTPVVQPSLW*GSLAEAPAPMLPAS Trigger: CGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCAGAGACTTGGCTGCACCACTGGCGTATCACCCAGCTTCCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS CCA 90 bp | GTTCCGCCAGGAGCCTGTTGTGCCTTAGCGGGGCCACTTCCTCCGTaGCAGCTCCTCCCGTGCTCTGGCCTTGCAGAACTGTGGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VPPGACCALAGPLPP*QLLPCSGLAELWQC Trigger: ACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCACAACAGGCTCCTGGCGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CAA 90 bp | CCCAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGCACCAGCGCCCATGTaGCCTGCTTCGGTCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSSMQSSRGGVYCFPGFAPAPM*PASVSV Trigger: GACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGC...AAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CAA 90 bp | CACTCAGGTCCTGTAAACGTGGTTAGTCCTGGGGCTCTGCTTCCGAGGAAGCCACTCTGGTGCGGCAGCTaGGCGGAAGCACCAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGPVNVVSPGALLPRKPLWCGS*AEAPAP Trigger: GGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCAGAG...TGGCTTCCTCGGAAGCAGAGCCCCAGGACTAACCACGTTTACAGGACCTGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | TGTTGTGCCTTAGCGGGGCCACTTCCTCCGTGGCAGCTCCTCCCGTaGTCTGGCCTTGCAGAACTGTGGCAATGTGGTTCAGGAGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCALAGPLPPWQLLP*SGLAELWQCGSGGR Trigger: CCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCACAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | TCTCTGGTGCGGCAGCTTGGCGGAAGCACCAGCGCCCATGTTGCCTaGTTCGGTCTCAGTCTTCCAGGGTGTGTCCTGGCCCTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVRQLGGSTSAHVA*FGLSLPGCVLALHA Trigger: AGCATGAAGGGCCAGGACACACCCTGGAAGACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | CAAGTCTCTGGTGCGGCAGCTTGGCGGAAGCACCAGCGCCCATGTTaGCTGCTTCGGTCTCAGTCTTCCAGGGTGTGTCCTGGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QVSGAAAWRKHQRPC*LLRSQSSRVCPGPS Trigger: TGAAGGGCCAGGACACACCCTGGAAGACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCAGAGACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS CCA 90 bp | TGCCTTAGCGGGGCCACTTCCTCCGTGGCAGCTCCTCCCGTGCTCTaGCCTTGCAGAACTGTGGCAATGTGGTTCAGGAGGTCGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSGATSSVAAPPVL*PCRTVAMWFRRSVK Trigger: CTTTACCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS GCA 90 bp | AGCGGGGCCACTTCCTCCGTGGCAGCTCCTCCCGTGCTCTGGCCTTaGAGAACTGTGGCAATGTGGTTCAGGAGGTCGGTAAAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGATSSVAAPPVLWP*RTVAMWFRRSVKNS Trigger: TGAGTTCTTTACCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CAA 90 bp | CAGATCCTCCATGCAGAGCTCCCGAGGGGGCGTCTACTGCTTCCCTGGCTTTGGAGGACAGCATTGTGGTaGATGAAGTTCTGGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QILHAELPRGRLLLPWLWRTALW*MKFWTT Trigger: TGTGGTCCAGAACTTCATCAACCACAATGCTGTCCT...CCAAAGCCAGGGAAGCAGTAGACGCCCCCTCGGGAGCTCTGCATGGAGGATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CAA 90 bp | GCTACACCCACAGGAAGCTCCTTTCCCTTCCTACAACCCAGATCCTCCATGCAGTCCCGTGCTCTGGCCTaGCAGAACTGTGGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ATPTGSSFPFLQPRSSMQSRALA*QNCGNV Trigger: CACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGA...CTGCATGGAGGATCTGGGTTGTAGGAAGGGAAAGGAGCTTCCTGTGGGTGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
||
| CDS-3UTR CAA 90 bp | ATGATCTGTTGGAAGTCCCAGGGTAAATCCTGGGTCCTGGCAGACTCCTGGACTCCCACCACAAACACCTaGTACAGGACAGCATTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MICWKSQGKSWVLADSWTPTTNT*YRTALW Trigger: CCACAATGCTGTCCTGTACAAGGTGTTTGTGGTGGG...AGTCCAGGAGTCTGCCAGGACCCAGGATTTACCCTGGGACTTCCAACAGATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS-3UTR CAA 90 bp | GCTACACCCACAGGAAGCTCCTTTCCCTTCCTACAACCCAGATCCTCCATGCAGAGCATCGATGTACTCTaGGAACCTGTGCACCAATTC | + |
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Preference number: 5 (lower is better) Translates to: ATPTGSSFPFLQPRSSMQSIDVL*EPVHQF Trigger: GAATTGGTGCACAGGTTCCAAGAGTACATCGATGCT...CTGCATGGAGGATCTGGGTTGTAGGAAGGGAAAGGAGCTTCCTGTGGGTGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS-3UTR CAA 90 bp | TTAGTGGCCTTCCCAGGGCTGCTGCTTCTAGTGTACTCTATCTTATTAGACCTATACTGTGAGGAAGCCTaGGTGGCCAGAGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: LVAFPGLLLLVYSILLDLYCEEA*VAREAT Trigger: TGTGGCCTCTCTGGCCACCAAGGCTTCCTCACAGTA...TAGGTCTAATAAGATAGAGTACACTAGAAGCAGCAGCCCTGGGAAGGCCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | GGCCCTTCATGCTGCCACAGCAGCCAGGGCTGGCACTaGACGTCCGCTCCCCAGCCAGGCTGCCTGCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: GPSCCHSSQGWH*TSAPQPGCLPV Trigger: AACCGGCAGGCAGCCTGGCTGGGGAGCGGACGTGCAGTGCCAGCCCTGGCTGCTGTGGCAGCATGAAGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | TGTCCTGGCCCTTCATGCTGCCACAGCAGCCAGGGCTaGCACTGCACGTCCGCTCCCCAGCCAGGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: CPGPSCCHSSQG*HCTSAPQPGCL Trigger: CAGGCAGCCTGGCTGGGGAGCGGACGTGCAGTGCCAGCCCTGGCTGCTGTGGCAGCATGAAGGGCCAGGACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CAA 72 bp | CCAGCCAGGCTGCCTGCCGGTTCCGCCAGGAGCCTGTaGTGCCTTAGCGGGGCCACTTCCTCCGTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PARLPAGSARSL*CLSGATSSVAA Trigger: AGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCACAACAGGCTCCTGGCGGAACCGGCAGGCAGCCTGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | CGGCAGCTTGGCGGAAGCACCAGCGCCCATGTTGCCTaGTTCGGTCTCAGTCTTCCAGGGTGTGTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RQLGGSTSAHVA*FGLSLPGCVLA Trigger: GGCCAGGACACACCCTGGAAGACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | GGAGCCTGTTGTGCCTTAGCGGGGCCACTTCCTCCGTaGCAGCTCCTCCCGTGCTCTGGCCTTGCAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: GACCALAGPLPP*QLLPCSGLAEL Trigger: CAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCACAACAGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | TCTCAGTCTTCCAGGGTGTGTCCTGGCCCTTCATGCTaGCACAGCAGCCAGGGCTGGCACTGCACGTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SQSSRVCPGPSC*HSSQGWHCTSA Trigger: AGCGGACGTGCAGTGCCAGCCCTGGCTGCTGTGGCAGCATGAAGGGCCAGGACACACCCTGGAAGACTGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | CTGGGTGATACGCCAGTGGTGCAGCCAAGTCTCTGGTaGGGCAGCTTGGCGGAAGCACCAGCGCCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGDTPVVQPSLW*GSLAEAPAPML Trigger: CAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCAGAGACTTGGCTGCACCACTGGCGTATCACCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | GGGGCCACTTCCTCCGTGGCAGCTCCTCCCGTGCTCTaGCCTTGCAGAACTGTGGCAATGTGGTTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GATSSVAAPPVL*PCRTVAMWFRR Trigger: CCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CAA 72 bp | TGGTGCGGCAGCTTGGCGGAAGCACCAGCGCCCATGTaGCCTGCTTCGGTCTCAGTCTTCCAGGGTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: WCGSLAEAPAPM*PASVSVFQGVS Trigger: GGACACACCCTGGAAGACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCTGCCGCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | TTGCCTGCTTCGGTCTCAGTCTTCCAGGGTGTGTCCTaGCCCTTCATGCTGCCACAGCAGCCAGGGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPASVSVFQGVS*PFMLPQQPGLA Trigger: TGCCAGCCCTGGCTGCTGTGGCAGCATGAAGGGCCAGGACACACCCTGGAAGACTGAGACCGAAGCAGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | TTAGCGGGGCCACTTCCTCCGTGGCAGCTCCTCCCGTaGTCTGGCCTTGCAGAACTGTGGCAATGTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LAGPLPPWQLLP*SGLAELWQCGS Trigger: TGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | TGTGAGGAAGCCTTGGTGGCCAGAGAGGCCACACAGTaGTGCTGGAAGCTGGGTGATACGCCAGTGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CEEALVAREATQ*CWKLGDTPVVQ Trigger: CTGCACCACTGGCGTATCACCCAGCTTCCAGCAGCACTGTGTGGCCTCTCTGGCCACCAAGGCTTCCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | TGGTGGCCAGAGAGGCCACACAGTGCTGCTGGAAGCTaGGTGATACGCCAGTGGTGCAGCCAAGTCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WWPERPHSAAGS*VIRQWCSQVSG Trigger: ACCAGAGACTTGGCTGCACCACTGGCGTATCACCCAGCTTCCAGCAGCACTGTGTGGCCTCTCTGGCCACCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CAA 72 bp | CACTTCCTCCGTGGCAGCTCCTCCCGTGCTCTGGCCTaGCAGAACTGTGGCAATGTGGTTCAGGAGGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: HFLRGSSSRALA*QNCGNVVQEVG Trigger: ACCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | ACTTCCTCCGTGGCAGCTCCTCCCGTGCTCTGGCCTTaGAGAACTGTGGCAATGTGGTTCAGGAGGTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: TSSVAAPPVLWP*RTVAMWFRRSV Trigger: TACCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS GCA 72 bp | ATGATGTCAATTCCAAACAGTGACACTCCCAGCGCCTaGCGCAGAGCCCGGGACAGCTCCCGGATAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: MMSIPNSDTPSA*RRARDSSRITS Trigger: TGAGGTTATCCGGGAGCTGTCCCGGGCTCTGCGGCAGGCGCTGGGAGTGTCACTGTTTGGAATTGACATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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| CDS CCA 72 bp | CCTCCCGTGCTCTGGCCTTGCAGAACTGTGGCAATGTaGTTCAGGAGGTCGGTAAAGAACTCACTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPVLWPCRTVAM*FRRSVKNSLTP Trigger: AGGAGTGAGTGAGTTCTTTACCGACCTCCTGAACCACATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046518.12 |
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