Pregenerated sensors for ITM2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026223Ensembl transcript IDs: ENSMUST00000027425.16, ENSMUST00000185569.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCCAGGGCCTGCAGCTCACAGCCGGTGACTTCTATACCCACCTaGCCCTGTGTTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LPRACSSQPVTSIPT*PCVPRRQARAARLF Trigger: GAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCTGGGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR TCA 90 bp | GGCATGGGTTCTATCCACTGCCCAGGGCCTGCAGCTCACAGCCGGTaGCTTCTATACCCACCTGCCCCTGTGTTCCCAGGCGCCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GMGSIHCPGPAAHSR*LLYPPAPVFPGARP Trigger: TGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCTGGGCAGTGGATAGAACCCATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR CCA 90 bp | TTGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGCTaGTGGGCTGAAGGCACTGACAGGAGTCCTGGGAAGACCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LCLADSSHPLTPGSC*WAEGTDRSPGKTPG Trigger: TCCTGGGGTCTTCCCAGGACTCCTGTCAGTGCCTTCAGCCCACCAGCAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CCA 90 bp | GTGTTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTTaGTTCCACTCAGAGGACAATTGTGCTTGGCAGACTCATCCCACC | + |
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Preference number: 1 (lower is better) Translates to: VFPGARPGRPGSSFL*FHSEDNCAWQTHPT Trigger: GGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 90 bp | CCCAGATGTGTAGGAAGGCATGGGTTCTATCCACTGCCCAGGGCCTaGAGCTCACAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PRCVGRHGFYPLPRA*SSQPVTSIPTCPCV Trigger: AACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCTGGGCAGTGGATAGAACCCATGCCTTCCTACACATCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR GCA 90 bp | GCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTaGTTGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AARLFISLVPLRGQL*LADSSHPLTPGSCW Trigger: CCAGCAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 90 bp | CTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTTGTaGTCTGATGGGTCCAACCCAGGACACATTTCCCTATCCTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: LTGVLGRPQDSHLLL*SDGSNPGHISLSLV Trigger: GACTAAGGATAGGGAAATGTGTCCTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 90 bp | TGTGTTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTaGGTTCCACTCAGAGGACAATTGTGCTTGGCAGACTCATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CVPRRQARAARLFIS*VPLRGQLCLADSSH Trigger: GTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAAGCCACCTTCTCTTGTaGTCTGATGGGTCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: FPGARPGRPGSSFLWFHSSHLLL*SDGSNP Trigger: TGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCT...TGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCTGCAGCTCACAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCGAGGACAATTGTGCTTaGCAGACTCATCCCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: RACSSQPVTSIPTCPCVPEDNCA*QTHPTL Trigger: GAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTC...GGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCACACGCCCCTGGACAGAGGGGAAAGATCCAGAACGGAAGAGGAGGCAGGGCTTCCCCAAGTGTaGGGGCTGTTTGTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KHHTPLDRGERSRTEEEAGLPQV*GLFVSL Trigger: GAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCC...TGCCTCCTCTTCCGTTCTGGATCTTTCCCCTCTGTCCAGGGGCGTGTGATGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGACACATTTCCCTATCCTTAGTCCACACCCAGGCCTAAGAACCAGGAGGGGGCTTCCCCAAGTGTaGGGGCTGTTTGTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PRTHFPILSPHPGLRTRRGLPQV*GLFVSL Trigger: GAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCC...CCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAGGATAGGGAAATGTGTCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCACACGCCCCTGGACAGAGGGGAAAGATCCAGAACGGAAGAGGAGGCAACTCCAGGCTCCTGCTaGTGGGCTGAAGGCACTGAC | + |
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Preference number: 2 (lower is better) Translates to: KHHTPLDRGERSRTEEEATPGSC*WAEGTD Trigger: GTCAGTGCCTTCAGCCCACCAGCAGGAGCCTGGAGT...TGCCTCCTCTTCCGTTCTGGATCTTTCCCCTCTGTCCAGGGGCGTGTGATGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR CAA 90 bp | AGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATaGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RAARLFISLVPLRGQ*CLADSSHPLTPGSC Trigger: GCAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTCTCCCACCTCCCACCTaGAAGATCAGCAGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RPGRPGSSFLWFHSEDNCLPPPT*KISRGR Trigger: TCTGCCTCTGCTGATCTTTCAGGTGGGAGGTGGGAG...ACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR TCA 90 bp | AACATCACACGCCCCTGGACAGAGGGGAAAGATCCAGAACGGAAGAGGAGGCAGCCTTCTCTTGTGCTCTaGTGGGTCCAACCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: NITRPWTEGKDPERKRRQPSLVL*WVQPRT Trigger: TGTCCTGGGTTGGACCCATCAGAGCACAAGAGAAGG...CTGCCTCCTCTTCCGTTCTGGATCTTTCCCCTCTGTCCAGGGGCGTGTGATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAGACCCCAGGATAGCCACCTTCTCTTGTGCTCTGATGGGTCCAACCCAGTTTAGTCCTTCCCCTTaGCCCAGCCACTGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: WEDPRIATFSCALMGPTQFSPSP*PSHWGD Trigger: ATCTCCCCAGTGGCTGGGCCAAGGGGAAGGACTAAA...CTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 90 bp | GCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTGCTaGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ARLFISLVPLRGQLC*ADSSHPLTPGSCWW Trigger: CCACCAGCAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTTCAGGGCTTCCCCAAGTGTGGGGGCTGTTTGTGAGCCTCATGCCAAACTCCCACCTCCCACCTaGAAGATCAGCAGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KSFRASPSVGAVCEPHAKLPPPT*KISRGR Trigger: TCTGCCTCTGCTGATCTTTCAGGTGGGAGGTGGGAG...TTTGGCATGAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCCTGAAAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCAGGCGCCAGGCCAGGGCTCTTCATTTCTTTaGTTCCACTCAGAGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: TAGDFYTHLPLCSQAPGQGSSFL*FHSEDN Trigger: ATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCC...CTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 90 bp | GCACTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTaGTGCTCTGATGGGTCCAACCCAGGACACATTTCCCTATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: ALTGVLGRPQDSHLL*CSDGSNPGHISLSL Trigger: TAAGGATAGGGAAATGTGTCCTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTCCCTATCCTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACAGGGGAATTTAGTCCTTCCCCTTaGCCCAGCCACTGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: HFPILSPHPGLRTRRTGEFSPSP*PSHWGD Trigger: ATCTCCCCAGTGGCTGGGCCAAGGGGAAGGACTAAA...TTCCCCTGTCCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAGGATAGGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTGCTTGGCAAGCCACCTTCTCTTGTaGTCTGATGGGTCCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: AARLFISLVPLRGQLCLASHLLL*SDGSNP Trigger: TGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCT...TGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 72 bp | GCCTGCAGCTCACAGCCGGTGACTTCTATACCCACCTaGCCCTGTGTTCCCAGGCGCCAGGCCAGGGCGGCC | + |
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Preference number: 3 (lower is better) Translates to: ACSSQPVTSIPT*PCVPRRQARAA Trigger: GGCCGCCCTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCAGGCGCCAGGCCAGGAGAGGACAATTGTGCTaGGCAGACTCATCCCACCCT | + |
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Preference number: 3 (lower is better) Translates to: QPVTSIPTCPCVPRRQARRGQLC*ADSSHP Trigger: AGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCT...CCTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 72 bp | GTAGGAAGGCATGGGTTCTATCCACTGCCCAGGGCCTaGAGCTCACAGCCGGTGACTTCTATACCCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: VGRHGFYPLPRA*SSQPVTSIPTC Trigger: GCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCTGGGCAGTGGATAGAACCCATGCCTTCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| 3UTR CCA 72 bp | GGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTTaGTTCCACTCAGAGGACAATTGTGCTTGGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: GARPGRPGSSFL*FHSEDNCAWQT Trigger: AGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGCCTGCAGCTCACAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCCGGCTCTTCATTTCTTaGGTTCCACTCAGAGGACAA | + |
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Preference number: 3 (lower is better) Translates to: RACSSQPVTSIPTCPCVPRLFIS*VPLRGQ Trigger: TTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCG...GGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 72 bp | GTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTTGTaGTCTGATGGGTCCAACCCAGGACACATTTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: VLGRPQDSHLLL*SDGSNPGHISL Trigger: TAGGGAAATGTGTCCTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR GCA 72 bp | CTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTaGTTGGCAGACTCATCCCACCCTCTAACTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LFISLVPLRGQL*LADSSHPLTPG Trigger: GCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | CAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCAGGCGCCAGGCCAGGCCCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QPVTSIPTCPCVPRRQARPRWKS*MMSAGS Trigger: GGACCCTGCAGACATCATCCATGACTTCCAGCGGGG...CCTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAAGGCGAGTCCGGATCTaGGAGGACAGGGAGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FPGARPGRPGSSFLWFHSRRVRI*EDRESS Trigger: CGAAGACTCCCTGTCCTCCCAGATCCGGACTCGCCT...TGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR GCA 90 bp | CAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCAGGCGCCAGGCCAGGGTCATGGATGATGTCTaGAGGGTCCCCACCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: QPVTSIPTCPCVPRRQARVMDDV*RVPTTK Trigger: TTTGGTGGTGGGGACCCTGCAGACATCATCCATGAC...CCTGGCCTGGCGCCTGGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCTGCAGCTCACAGCCGGTGACTTCTATACCCACCTGCCCCTGTGTTCCCAGTGGCGGATGGCGTTaGAGTTCTTGCCCCCACGTT | + |
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Preference number: 4 (lower is better) Translates to: RACSSQPVTSIPTCPCVPSGGWR*SSCPHV Trigger: AACGTGGGGGCAAGAACTGCAACGCCATCCGCCACT...GGGAACACAGGGGCAGGTGGGTATAGAAGTCACCGGCTGTGAGCTGCAGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCCAGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTGATGATGTACGTCTGTaGGAGGTAGGTCCCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CSQAPGQGGPALHFFGSTDDVRL*EVGPSP Trigger: CGGAGAGGGACCTACCTCCCACAGACGTACATCATC...AGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCTGGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| 3UTR CAA 72 bp | AGGCGCCAGGCCAGGGCGGCCCGGCTCTTCATTTCTTaGGTTCCACTCAGAGGACAATTGTGCTTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RRQARAARLFIS*VPLRGQLCLAD Trigger: GTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCTGGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGGCTTCCCCAAGTGTGGGGGCTGTTTGTGAGCCTCATGCCAAATCCCACAGGCGAGTCCGGATCTaGGAGGACAGGGAGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FRASPSVGAVCEPHAKSHRRVRI*EDRESS Trigger: CGAAGACTCCCTGTCCTCCCAGATCCGGACTCGCCT...GTGGGATTTGGCATGAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | GAGGCACCAAAGCCTCTCCCAGACTCAGGGCTGAGGGCAGCCAGCACGAACATCCAAACACAAGGCCCATaGGCAATACAACCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EAPKPLPDSGLRAASTNIQTQGP*AIQPCP Trigger: TGGGCATGGTTGTATTGCTCATGGGCCTTGTGTTTG...GATGTTCGTGCTGGCTGCCCTCAGCCCTGAGTCTGGGAGAGGCTTTGGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR GCA 90 bp | GGTGGGCTGAAGGCACTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTGTCATGGATGATGTCTaGAGGGTCCCCACCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: GGLKALTGVLGRPQDSHLVMDDV*RVPTTK Trigger: TTTGGTGGTGGGGACCCTGCAGACATCATCCATGAC...AAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAGTGCCTTCAGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | GGTGGGCTGAAGGCACTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTACCACCATCTCCTCCTaGATGATGTACGTCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLKALTGVLGRPQDSHLTTISS*MMYVCG Trigger: CCCACAGACGTACATCATCCAGGAGGAGATGGTGGT...AAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAGTGCCTTCAGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | GCACTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTTGTGCTCTCCATCTCCTCCTGGATaGTGTACGTCTGTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ALTGVLGRPQDSHLLLCSPSPPG*CTSVGG Trigger: ACCTCCCACAGACGTACATCATCCAGGAGGAGATGG...AGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAGACCCCAGGATAGCCACCTTCTCTTGTGCTCTGATGGGTCCAACCCAGACACCACCCCACAGATaGGCGTCTCCACCACAAATG | + |
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Preference number: 4 (lower is better) Translates to: WEDPRIATFSCALMGPTQTPPHR*ASPPQM Trigger: CATTTGTGGTGGAGACGCTCATCTGTGGGGTGGTGT...CTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR GCA 90 bp | GCACTGACAGGAGTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTTGTGCTCTTCCTTGTCGCGGACATaGTCTGTCACCACCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALTGVLGRPQDSHLLLCSSLSRT*SVTTIS Trigger: GGAGATGGTGGTGACAGAGCATGTCCGCGACAAGGA...AGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGACTCCTGTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGACAATTGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGTCTCGAAGTGGCGGATaGCGTTGCAGTTCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QRTIVLGRLIPPSNSRLLSRSGG*RCSSCP Trigger: GGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGA...CAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 72 bp | GGAGTCCTGGGAAGACCCCAGGATAGCCACCTTCTCTaGTGCTCTGATGGGTCCAACCCAGGACACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVLGRPQDSHLL*CSDGSNPGHIS Trigger: GGAAATGTGTCCTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCAGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | TCCACTCAGAGGACAATTGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGGCTGGAAGTCATGGATaGTGTCTGCAGGGTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: STQRTIVLGRLIPPSNSRAGSHG*CLQGPH Trigger: GTGGGGACCCTGCAGACATCATCCATGACTTCCAGC...CCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | CTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACAGGGGAAGTGTGCTATGCACCATCTCCTCCTGGATaGTGTACGTCTGTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPHPGLRTRRTGEVCYAPSPPG*CTSVGG Trigger: ACCTCCCACAGACGTACATCATCCAGGAGGAGATGG...TGCATAGCACACTTCCCCTGTCCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAGACCCCAGGATAGCCACCTTCTCTTGTGCTCTGATGGGTCCAACCCAGGCAGTGAGACCCCGCTaGAAGTCATGGATGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: WEDPRIATFSCALMGPTQAVRPR*KSWMMS Trigger: AGACATCATCCATGACTTCCAGCGGGGTCTCACTGC...CTGGGTTGGACCCATCAGAGCACAAGAGAAGGTGGCTATCCTGGGGTCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR CCA 90 bp | GCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTGCTTGGCATCTCGAAGTGGCGGATaGCGTTGCAGTTCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AARLFISLVPLRGQLCLASRSGG*RCSSCP Trigger: GGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGA...TGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | AAGTCTTTCAGGGCTTCCCCAAGTGTGGGGGCTGTTTGTGAGCCTCATGCCAAAACACCACCCCACAGATaGGCGTCTCCACCACAAATG | + |
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Preference number: 4 (lower is better) Translates to: KSFRASPSVGAVCEPHAKTPPHR*ASPPQM Trigger: CATTTGTGGTGGAGACGCTCATCTGTGGGGTGGTGT...TTTGGCATGAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCCTGAAAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTCAGGGCTTCCCCAAGTGTGGGGGCTGTTTGTGAGCCTCATGCCAAATCCTTGTCGCGGACATaGTCTGTCACCACCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: KSFRASPSVGAVCEPHAKSLSRT*SVTTIS Trigger: GGAGATGGTGGTGACAGAGCATGTCCGCGACAAGGA...TTTGGCATGAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCCTGAAAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | CCAGACTCAGGGCTGAGGGCAGCCAGCACGAACATCAGTAAAAACATGCAGGAAATACAACCATGCCCATaGACAGGTAGCACACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PDSGLRAASTNISKNMQEIQPCP*TGSTRR Trigger: GCGGCGTGTGCTACCTGTCCATGGGCATGGTTGTAT...TTCCTGCATGTTTTTACTGATGTTCGTGCTGGCTGCCCTCAGCCCTGAGTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR CCA 90 bp | CCCAGGACACATTTCCCTATCCTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACCACCATCTCCTCCTaGATGATGTACGTCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PRTHFPILSPHPGLRTRRTTISS*MMYVCG Trigger: CCCACAGACGTACATCATCCAGGAGGAGATGGTGGT...CCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAGGATAGGGAAATGTGTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | CTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACAGGGGAAGTGTGCTATGCACAAACACAAGGCCCATaGGCAATACAACCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSPHPGLRTRRTGEVCYAQTQGP*AIQPCP Trigger: TGGGCATGGTTGTATTGCTCATGGGCCTTGTGTTTG...TGCATAGCACACTTCCCCTGTCCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | TCCACTCAGAGGACAATTGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGTTATCTCGGGCCAGCTaGGCAAGGAAGAAGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: STQRTIVLGRLIPPSNSRLSRAS*ARKKYL Trigger: CAGGTACTTCTTCCTTGCTCAGCTGGCCCGAGATAA...CCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | TCTATGGAAAAGTGCCCAAGGTACAAGCTAAGCAAAGGGAGGAGGAGGGCCAGAATACAACCATGCCCATaGACAGGTAGCACACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SMEKCPRYKLSKGRRRARIQPCP*TGSTRR Trigger: GCGGCGTGTGCTACCTGTCCATGGGCATGGTTGTAT...TCTGGCCCTCCTCCTCCCTTTGCTTAGCTTGTACCTTGGGCACTTTTCCATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | CTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACAGGGGAAGTGTGCTATGCAGATGATGTACGTCTGTaGGAGGTAGGTCCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPHPGLRTRRTGEVCYADDVRL*EVGPSL Trigger: AAGAGAGGGACCTACCTCCCACAGACGTACATCATC...TGCATAGCACACTTCCCCTGTCCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR CCA 90 bp | TCTATGGAAAAGTGCCCAAGGTACAAGCTAAGCAAAGGGAGGAGGAGGGCCAGACTCCGCTGGAAGTCATaGATGATGTCTGCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMEKCPRYKLSKGRRRARLRWKS*MMSAGS Trigger: GGACCCTGCAGACATCATCCATGACTTCCAGCGGAG...TCTGGCCCTCCTCCTCCCTTTGCTTAGCTTGTACCTTGGGCACTTTTCCATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS-3UTR TCA 90 bp | CTCCCGCTTCCATCATTCACAGTAGCCCAGATGTGTAGGAAGGCATGGGTTCTATTATCTCGGGCCAGCTaGGCAAGGAAGAAGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSFTVAQMCRKAWVLLSRAS*ARKKYL Trigger: CAGGTACTTCTTCCTTGCTCAGCTGGCCCGAGATAA...TAGAACCCATGCCTTCCTACACATCTGGGCTACTGTGAATGATGGAAGCGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS-3UTR CCA 90 bp | CAGAGGACAATTGTGCTTGGCAGACTCATCCCACCCTCTAACTCCAGGCTCCTGAATGTATTCTCGAAGTaGCGGATGGCGTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRTIVLGRLIPPSNSRLLNVFSK*RMALQF Trigger: GAACTGCAACGCCATCCGCCACTTCGAGAATACATT...CAGGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CCA 90 bp | CATTTCCCTATCCTTAGTCCACACCCAGGCCTAAGAACCAGGAGGACAGGGGAAAATGTATTCTCGAAGTaGCGGATGGCGTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFPILSPHPGLRTRRTGENVFSK*RMALQF Trigger: GAACTGCAACGCCATCCGCCACTTCGAGAATACATT...TTCCCCTGTCCTCCTGGTTCTTAGGCCTGGGTGTGGACTAAGGATAGGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 72 bp | TTCATTTCTTTGGTTCCACTCAGAGGACAATTGTGCTaGGCAGACTCATCCCACCCTCTAACTCCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FISLVPLRGQLC*ADSSHPLTPGS Trigger: GGAGCCTGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| 3UTR CAA 72 bp | CGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATaGTGCTTGGCAGACTCATCCCACCCTCTAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLFISLVPLRGQ*CLADSSHPLTP Trigger: TGGAGTTAGAGGGTGGGATGAGTCTGCCAAGCACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS GCA 90 bp | TTCCTCCCTCGCCGGCGTCAGCAGGATCTCCGCGGCCGGGGCAGATaGCGAGGCCGGACCAGACGCCGCTGCTTTGTCCGCTTTATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLPRRRQQDLRGRGR*RGRTRRRCFVRFIS Trigger: GCTGATAAAGCGGACAAAGCAGCGGCGTCTGGTCCGGCCTCGGCATCTGCCCCGGCCGCGGAGATCCTGCTGACGCCGGCGAGGGAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGGCTTCCCCAAGTGTGGGGGCTGTTTGTGAGCCTCATGCCAAATCCCACAAGTGGCGGATGGCGTaGCAGTTCTTGCCCCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: FRASPSVGAVCEPHAKSHKWRMA*QFLPPR Trigger: ACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTT...GTGGGATTTGGCATGAGGCTCACAAACAGCCCCCACACTTGGGGAAGCCCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 90 bp | CCTCCTTGTCGCGGACATGCTCTGTCACCACCATCTCCTCCTGGATaGTGTACGTCTGTGGGAGGTAGGTCCCTCTCCGCTGGAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPCRGHALSPPSPPG*CTSVGGRSLSAGSH Trigger: ATGACTTCCAGCGGAGAGGGACCTACCTCCCACAGACGTACATCATCCAGGAGGAGATGGTGGTGACAGAGCATGTCCGCGACAAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS GCA 90 bp | CTGTGGGAGGTAGGTCCCTCTCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCCCCACCACCAAACTGGGGCACAGGGACATTAATACG | + |
|
Preference number: 5 (lower is better) Translates to: LWEVGPSPLEVMDDV*RVPTTKLGHRDINT Trigger: CGTATTAATGTCCCTGTGCCCCAGTTTGGTGGTGGGGACCCTGCAGACATCATCCATGACTTCCAGCGGAGAGGGACCTACCTCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS-3UTR CAA 90 bp | AGGCCAGGGCGGCCCGGCTCTTCATTTCTTTGGTTCCACTCAGAGGACAATTGTAAGTGGCGGATGGCGTaGCAGTTCTTGCCCCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: RPGRPGSSFLWFHSEDNCKWRMA*QFLPPR Trigger: ACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTT...ACAATTGTCCTCTGAGTGGAACCAAAGAAATGAAGAGCCGGGCCGCCCTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CCA 90 bp | ACCACCCCACAGATGAGCGTCTCCACCACAAATGTATTCTCGAAGTaGCGGATGGCGTTGCAGTTCTTGCCCCCACGTTTGTTGATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTPQMSVSTTNVFSK*RMALQFLPPRLLIR Trigger: GCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATTTGTGGTGGAGACGCTCATCTGTGGGGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 90 bp | GGAAGAAGTACCTGTAGATGTAGACCGAGGCAAACACAAGGCCCATaGGCAATACAACCATGCCCATGGACAGGTAGCACACGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSTCRCRPRQTQGP*AIQPCPWTGSTRRP Trigger: TGGGCGGCGTGTGCTACCTGTCCATGGGCATGGTTGTATTGCTCATGGGCCTTGTGTTTGCCTCGGTCTACATCTACAGGTACTTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS GCA 72 bp | CGCCGGCGTCAGCAGGATCTCCGCGGCCGGGGCAGATaGCGAGGCCGGACCAGACGCCGCTGCTTTGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRQQDLRGRGR*RGRTRRRCFVR Trigger: GCGGACAAAGCAGCGGCGTCTGGTCCGGCCTCGGCATCTGCCCCGGCCGCGGAGATCCTGCTGACGCCGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CAA 72 bp | TGGCGGATGGCGTTGCAGTTCTTGCCCCCACGTTTGTaGATCCGCCTCCGGGTAGACCGGCGCCGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WRMALQFLPPRL*IRLRVDRRRSR Trigger: CCGGCTGCGGCGCCGGTCTACCCGGAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CAA 72 bp | AAGTGGCGGATGGCGTTGCAGTTCTTGCCCCCACGTTaGTTGATCCGCCTCCGGGTAGACCGGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KWRMALQFLPPR*LIRLRVDRRRS Trigger: GCTGCGGCGCCGGTCTACCCGGAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 72 bp | GTGGGAGGTAGGTCCCTCTCCGCTGGAAGTCATGGATaGTGTCTGCAGGGTCCCCACCACCAAACTGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGGRSLSAGSHG*CLQGPHHQTGA Trigger: TGCCCCAGTTTGGTGGTGGGGACCCTGCAGACATCATCCATGACTTCCAGCGGAGAGGGACCTACCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS GCA 72 bp | GTAGGTCCCTCTCCGCTGGAAGTCATGGATGATGTCTaGAGGGTCCCCACCACCAAACTGGGGCACAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGPSPLEVMDDV*RVPTTKLGHRD Trigger: GTCCCTGTGCCCCAGTTTGGTGGTGGGGACCCTGCAGACATCATCCATGACTTCCAGCGGAGAGGGACCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS CAA 90 bp | TCCACCACAAATGTATTCTCGAAGTGGCGGATGGCGTTGCAGTTCTaGCCCCCACGTTTGTTGATCCGCCTCCGGGTAGACCGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: STTNVFSKWRMALQF*PPRLLIRLRVDRRR Trigger: GCGGCGCCGGTCTACCCGGAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATTTGTGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 72 bp | GCCGGTAGGTGTCCTTCCCGTTGCACAGGTGGTAGATaGAGGAACCCAGAGCCTCCTTGTCGCGGACATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRCPSRCTGGR*RNPEPPCRGHA Trigger: AGCATGTCCGCGACAAGGAGGCTCTGGGTTCCTTCATCTACCACCTGTGCAACGGGAAGGACACCTACCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 72 bp | CGCGGACATGCTCTGTCACCACCATCTCCTCCTGGATaGTGTACGTCTGTGGGAGGTAGGTCCCTCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGHALSPPSPPG*CTSVGGRSLSA Trigger: AGCGGAGAGGGACCTACCTCCCACAGACGTACATCATCCAGGAGGAGATGGTGGTGACAGAGCATGTCCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS CAA 72 bp | GGACCAGACGCCGCTGCTTTGTCCGCTTTATCAGCCTaGATGCCCGCTACCGCGGGCTGGAAACTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPDAAALSALSA*MPATAGWKLIF Trigger: GAAGATCAGTTTCCAGCCCGCGGTAGCGGGCATCAAGGCTGATAAAGCGGACAAAGCAGCGGCGTCTGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 72 bp | CGCGGACATGCTCTGTCACCACCATCTCCTCCTGGATaGTGTACGTCTGTGGGAGGTAGGTCCCTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGHALSPPSPPG*CTSVGGRSLSS Trigger: TGAAGAGAGGGACCTACCTCCCACAGACGTACATCATCCAGGAGGAGATGGTGGTGACAGAGCATGTCCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS CAA 90 bp | ATGAGCGTCTCCACCACAAATGTATTCTCGAAGTGGCGGATGGCGTaGCAGTTCTTGCCCCCACGTTTGTTGATCCGCCTCCGGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: MSVSTTNVFSKWRMA*QFLPPRLLIRLRVD Trigger: GTCTACCCGGAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATTTGTGGTGGAGACGCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CCA 72 bp | TGTCACCACCATCTCCTCCTGGATGATGTACGTCTGTaGGAGGTAGGTCCCTCTCCGCTGGAAGTCATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CHHHLLLDDVRL*EVGPSPLEVMD Trigger: ATCCATGACTTCCAGCGGAGAGGGACCTACCTCCCACAGACGTACATCATCCAGGAGGAGATGGTGGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185569.2 |
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| CDS CAA 72 bp | AATGTATTCTCGAAGTGGCGGATGGCGTTGCAGTTCTaGCCCCCACGTTTGTTGATCCGCCTCCGGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NVFSKWRMALQF*PPRLLIRLRVD Trigger: GTCTACCCGGAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CCA 72 bp | TGTCACCACCATCTCCTCCTGGATGATGTACGTCTGTaGGAGGTAGGTCCCTCTCTTCACGTTCATGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CHHHLLLDDVRL*EVGPSLHVHEE Trigger: CTCCTCATGAACGTGAAGAGAGGGACCTACCTCCCACAGACGTACATCATCCAGGAGGAGATGGTGGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027425.16 |
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| CDS CCA 72 bp | CAGATGAGCGTCTCCACCACAAATGTATTCTCGAAGTaGCGGATGGCGTTGCAGTTCTTGCCCCCACGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QMSVSTTNVFSK*RMALQFLPPRL Trigger: CAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATTTGTGGTGGAGACGCTCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS CAA 72 bp | TCCACCACAAATGTATTCTCGAAGTGGCGGATGGCGTaGCAGTTCTTGCCCCCACGTTTGTTGATCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: STTNVFSKWRMA*QFLPPRLLIRL Trigger: GAGGCGGATCAACAAACGTGGGGGCAAGAACTGCAACGCCATCCGCCACTTCGAGAATACATTTGTGGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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| CDS TCA 72 bp | ACCTGTAGATGTAGACCGAGGCAAACACAAGGCCCATaGGCAATACAACCATGCCCATGGACAGGTAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TCRCRPRQTQGP*AIQPCPWTGST Trigger: TGTGCTACCTGTCCATGGGCATGGTTGTATTGCTCATGGGCCTTGTGTTTGCCTCGGTCTACATCTACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027425.16 ENSMUST00000185569.2 |
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