Pregenerated sensors for ITLN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038209Ensembl transcript IDs: ENSMUST00000043094.13, ENSMUST00000168184.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTATTGCTCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATaGCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LYCSLAFQLLSQCFS*LGAHNGEVRANPAE Trigger: CTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGACTTAGTAACTGGAATGCTAATGAGCAATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| 3UTR CCA 72 bp | AGCATTCCAGTTACTAAGTCAGTGTTTCTCATGCCTTaGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGC | + |
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Preference number: 3 (lower is better) Translates to: SIPVTKSVFLMP*SPQWRSQGQSR Trigger: GCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGACTTAGTAACTGGAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| 3UTR GCA 72 bp | TCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATaGCTTGGAGCCCACAATGGAGAAGTCAGGGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SLAFQLLSQCFS*LGAHNGEVRAN Trigger: ATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGACTTAGTAACTGGAATGCTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAGTTGGGCACGTGCCAGATaGCCAGGTTCTCAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VSHALEPTMEKSGPIPQSWARAR*PGSQPG Trigger: TCCAGGCTGAGAACCTGGGCATCTGGCACGTGCCCA...ACTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCGCAAAGTCTCCACACTaGACGGGGTTACCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SVFLMPWSPQWRSQGQSRAKSPH*TGLPSG Trigger: CCCAGAAGGTAACCCCGTGCAGTGTGGAGACTTTGC...GCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR TCA 90 bp | AGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGCAGTATTACATCCAGTaGCCCTCACGCCAGCACACA | + |
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Preference number: 4 (lower is better) Translates to: SVSHALEPTMEKSGPIPQQYYIQ*PSRQHT Trigger: TGTGTGCTGGCGTGAGGGTCACTGGATGTAATACTG...CTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR TCA 90 bp | GTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAGTTTGTGTGCTCCTGCTTaGTTTCCTTGCAGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSHALEPTMEKSGPIPQSLCAPA*FPCSFW Trigger: CCAGAAGCTGCAAGGAAATCAAGCAGGAGCACACAA...ACTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GTCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGTTATGTCCCAAGTGCTaGAGGAAGCCAGTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VSVSHALEPTMEKSGPIPLCPKC*RKPVKV Trigger: CACCTTCACTGGCTTCCTGCAGCACTTGGGACATAA...CGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GTCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGGCCTTTGTGTGCTCCTaGTTGATTTCCTTGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VSVSHALEPTMEKSGPIPAFVCS*LISLQL Trigger: AAGCTGCAAGGAAATCAAGCAGGAGCACACAAAGGC...CGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAGTTCTTGTGCCTTTGTGTaGTCCTGCTTGATTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSHALEPTMEKSGPIPQSSCAFV*SCLISL Trigger: CAAGGAAATCAAGCAGGAGCACACAAAGGCACAAGA...ACTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAAACAGAAGCACAGCTaGTTCAGTTATCTTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SVFLMPWSPQWRSQGQSRKQKHS*FSYLPA Trigger: AGCCGGAAGATAACTGAAGCAGCTGTGCTTCTGTTT...GCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAGTTAGGAAAAGAAAGAATTaGCCCACCTGTTGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FLMPWSPQWRSQGQSRRVRKRKN*PTCWCP Trigger: TGGACACCAACAGGTGGGGCAATTCTTTCTTTTCCT...AACTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CCA 90 bp | GCAAGGAACATGATTTATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGGTTGCCATCCCCCTCTaGGTAGTCAGCTCTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARNMIYPALLLISIPVTKVAIPL*VVSSVA Trigger: GGCAACAGAGCTGACTACCCAGAGGGGGATGGCAAC...CTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATAAATCATGTTCCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GCAAGGAACATGATTTATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGGGTAGTCAGCTCTGTTaGCTTGCTGACTGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARNMIYPALLLISIPVTKGSQLC*LADWTS Trigger: GCTGGTCCAGTCAGCAAGGCAACAGAGCTGACTACC...CTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATAAATCATGTTCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATGCTCTTCCTCCAGTTGTaGAGGGGGCTTTTGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YPALLLISIPVTKSVFLMLFLQL*RGLLLG Trigger: GCCCAACAAAAGCCCCCTGCACAACTGGAGGAAGAG...CATGAGAAACACTGACTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | GCAAGGAACATGATTTATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGCAGGTTCTCTTCAGCTaGACTGCAACCTCTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ARNMIYPALLLISIPVTKQVLFS*TATSGS Trigger: GCTACCAGAGGTTGCAGTGCAGCTGAAGAGAACCTG...CTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATAAATCATGTTCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR TCA 90 bp | GCAAGGAACATGATTTATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGCTGCTGTACCCATTGTaGGTTCCATATCCATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ARNMIYPALLLISIPVTKLLYPL*VPYPSQ Trigger: TTGGGATGGATATGGAACTCACAATGGGTACAGCAG...CTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATAAATCATGTTCCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATGAGATTATGTCCCAAGTaGTGCAGGAAGCCAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: YPALLLISIPVTKSVFLMRLCPK*CRKPVK Trigger: CTTCACTGGCTTCCTGCAGCACTTGGGACATAATCT...CATGAGAAACACTGACTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR GCA 90 bp | TATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATGATAGAGACCATCTTGTaGCTTTGTGTGCTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: YPALLLISIPVTKSVFLMIETIL*LCVLLL Trigger: AAGCAGGAGCACACAAAGGCACAAGATGGTCTCTAT...CATGAGAAACACTGACTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CCA 90 bp | TATCCTGCTTTATTGCTCATTAGCATTCCAGTTACTAAGTCAGTGTTTCTCATGTTCTCCGTATTTCACTaGGTACTTCTTGTAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: YPALLLISIPVTKSVFLMFSVFH*VLLVEA Trigger: GGCCTCTACAAGAAGTACCCAGTGAAATACGGAGAA...CATGAGAAACACTGACTTAGTAACTGGAATGCTAATGAGCAATAAAGCAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | CAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCATTGTGCAGGGGGCTTTaGTTGGGCACGTGCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: QCFSCLGAHNGEVRANPALCRGL*LGTCQM Trigger: CATCTGGCACGTGCCCAACAAAAGCCCCCTGCACAA...TGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | GTCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGGAATTGCCCCACCTGTaGGTGTCCAGGTTCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VSVSHALEPTMEKSGPIPELPHL*VSRFSS Trigger: TGAAGAGAACCTGGACACCAACAGGTGGGGCAATTC...CGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | TCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCGAGGAAAAGAAAGAATaGCCCCACCTGTTGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVFLMPWSPQWRSQGQSREEKKE*PHLLVS Trigger: GGACACCAACAGGTGGGGCAATTCTTTCTTTTCCTC...GCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | TGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGAGGGTAATGCTGGGCCATaGTCAGTCCAACACTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CFSCLGAHNGEVRANPAEGNAGP*SVQHFP Trigger: AGGAAAGTGTTGGACTGACAATGGCCCAGCATTACC...CTCTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | AGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGCAGTTTGTGTGCTCCTGCTaGATTTCCTTGCAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SVSHALEPTMEKSGPIPQFVCSC*ISLQLL Trigger: CAGAAGCTGCAAGGAAATCAAGCAGGAGCACACAAA...CTGCGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS-3UTR CAA 90 bp | GTCAGTGTTTCTCATGCCTTGGAGCCCACAATGGAGAAGTCAGGGCCAATCCCGGAAATAGAGACCATCTaGTGCCTTTGTGTGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VSVSHALEPTMEKSGPIPEIETI*CLCVLL Trigger: CAGGAGCACACAAAGGCACAAGATGGTCTCTATTTC...CGGGATTGGCCCTGACTTCTCCATTGTGGGCTCCAAGGCATGAGAAACACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS TCA 72 bp | CTCCACCGATGCAGTGATGTTCAGTATTACATCCAGTaGCCCTCACGCCAGCACACAAGGCACTGGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LHRCSDVQYYIQ*PSRQHTRHWPL Trigger: GAGCGGCCAGTGCCTTGTGTGCTGGCGTGAGGGTCACTGGATGTAATACTGAACATCACTGCATCGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS CCA 72 bp | TGGGCAGAGAGGAAAAGAAAGAATTGCCCCACCTGTTaGTGTCCAGGTTCTCTTCAGCTGCACTGCAACCTC | + |
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Preference number: 6 (lower is better) Translates to: WAERKRKNCPTC*CPGSLQLHCNL Trigger: GAGGTTGCAGTGCAGCTGAAGAGAACCTGGACACCAACAGGTGGGGCAATTCTTTCTTTTCCTCTCTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS CAA 72 bp | CTGGGCAGAGAGGAAAAGAAAGAATTGCCCCACCTGTaGGTGTCCAGGTTCTCTTCAGCTGCACTGCAACCT | + |
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Preference number: 6 (lower is better) Translates to: LGREEKKELPHL*VSRFSSAALQP Trigger: AGGTTGCAGTGCAGCTGAAGAGAACCTGGACACCAACAGGTGGGGCAATTCTTTCTTTTCCTCTCTGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS CAA 90 bp | CTGGTAGATGACACCATTCTTCGTGCGCAGGAAATAGAGACCATCTaGTGCCTTTGTGTGCTCCTGCTTGATTTCCTTGCAGCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LVDDTILRAQEIETI*CLCVLLLDFLAASG Trigger: CCCAGAAGCTGCAAGGAAATCAAGCAGGAGCACACAAAGGCACAAGATGGTCTCTATTTCCTGCGCACGAAGAATGGTGTCATCTACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043094.13 |
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| CDS TCA 72 bp | GCACTGGCCGCTCTCTCATTATTAAACACTCTGAACTaGACATATCCTGCAGTAAATTCCCTCTGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALAALSLLNTLN*TYPAVNSLWPE Trigger: CTCTGGCCAGAGGGAATTTACTGCAGGATATGTTCAGTTCAGAGTGTTTAATAATGAGAGAGCGGCCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043094.13 ENSMUST00000168184.2 |
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| CDS CCA 72 bp | ATTGTCAGTCCAACACTTTCCTTCTCCGTATTTCACTaGGTACTTCTTGTAGTCATCACTTGTGGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: IVSPTLSFSVFH*VLLVVITCGSL Trigger: GAGGCTGCCACAAGTGATGACTACAAGAAGTACCCAGTGAAATACGGAGAAGGAAAGTGTTGGACTGACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168184.2 |
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