Pregenerated sensors for ITK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020395Ensembl transcript IDs: ENSMUST00000020664.13, ENSMUST00000101306.4, ENSMUST00000109237.9
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGACATCCTGTGGTCCTGCCGTGGGGTCTGAATGTGTCACCCTaGCCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: LRHPVVLPWGLNVSP*PIHPVELSVPHQRE Trigger: CTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGGGCAGGGTGACACATTCAGACCCCACGGCAGGACCACAGGATGTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 90 bp | CACAAGGATCATGACAGTGCTGAGTGGATGCCGCTCCTGAGAGGCTaGAATGATGACCGTTCTGTAGTCACTGCTTCAGCATCCTGCACA | + |
|
Preference number: 1 (lower is better) Translates to: HKDHDSAEWMPLLRG*NDDRSVVTASASCT Trigger: TGTGCAGGATGCTGAAGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTCAGCACTGTCATGATCCTTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 90 bp | CCAATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTaGTTGCCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCC | + |
|
Preference number: 1 (lower is better) Translates to: PISRRHPVHFGSTAQ*LPLSFLIVWARANA Trigger: GGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 90 bp | GACAGAAACCAGCAGAAGAGAATCCCATCTTCCCAAGCAGGACACTaGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTGCATGT | + |
|
Preference number: 1 (lower is better) Translates to: DRNQQKRIPSSQAGH*SKQCTRVHQSLRAC Trigger: ACATGCACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGAAGATGGGATTCTCTTCTGCTGGTTTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 90 bp | AGAACACCCTGGTTTAATCACCTCTTGCATTTCTTAGAAAAAGAATaGTGCTTTCCCGCTCTTCCATCCATAAAATGGGCACAATGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: RTPWFNHLLHFLEKE*CFPALPSIKWAQCL Trigger: GAGACATTGTGCCCATTTTATGGATGGAAGAGCGGGAAAGCATCATTCTTTTTCTAAGAAATGCAAGAGGTGATTAAACCAGGGTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATAAGAGGGGGAGGGGATaGTCCCGAGAGTGGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHKRGRG*SREWAM Trigger: CATTGCCCACTCTCGGGAGCATCCCCTCCCCCTCTT...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTCCGCTCCGCCTCATGTaGGGCAGGAAGCTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFPLRLM*GRKLWL Trigger: CAGCCACAGCTTCCTGCCTCACATGAGGCGGAGCGG...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGAGTGGATGCCGCTCCTaGGAGGCTGGAATGATGACC | + |
|
Preference number: 2 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVSGCRS*EAGMMT Trigger: GGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACT...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATCGGTGGAGCTCTCTGTaGCCCATCAAAGAGAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHRWSSL*PIKERW Trigger: CCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCG...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATCTGAATGTGTCACCCTaGCCTATCCACCCGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHLNVSP*PIHPVE Trigger: CTCCACCGGGTGGATAGGGCAGGGTGACACATTCAG...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAACAGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTGCAGCTCTTTGGTCCAGGCACCTGTaGGGGTTTCTGGACTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VKQGRWVRDNPKASFAALWSRHL*GFLDWW Trigger: CCACCAGTCCAGAAACCCCCACAGGTGCCTGGACCA...AAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTCCTGTGGTCCTGCCGTaGGGTCTGAATGTGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRPVVLP*GLNVSP Trigger: GGGTGACACATTCAGACCCCACGGCAGGACCACAGG...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGCTCCACCCTTTTCTATaGTGCTGCAGTTGTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVLHPFL*CCSCGC Trigger: GCAGCCACAACTGCAGCATCATAGAAAAGGGTGGAG...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGTGCTGCAGTTGTGGCTaGATAGGTGCTGGCACCATG | + |
|
Preference number: 2 (lower is better) Translates to: GVISISVLPSSVTGAAIQCCSCG*IGAGTM Trigger: CATGGTGCCAGCACCTATGCAGCCACAACTGCAGCA...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAAAGAGGGGGAGGGGATaGTCCCGAGAGTGGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: MGASLLNHTTDFSRFQCLKRGRG*SREWAM Trigger: CATTGCCCACTCTCGGGAGCATCCCCTCCCCCTCTT...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTCTGAATGTGTCACCCTaGCCTATCCACCCGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ETSCAFWKHRPVLASFLPLNVSP*PIHPVE Trigger: CTCCACCGGGTGGATAGGGCAGGGTGACACATTCAG...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATGTAGGAGACATCCTGTaGATTTTGGAAGCACCGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHVGDIL*ILEAPP Trigger: GGGCGGTGCTTCCAAAATGCACAGGATGTCTCCTAC...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATCCGCTCCTGAGAGGCTaGAATGATGACCGTTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHPLLRG*NDDRSV Trigger: TACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGG...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAACAGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTGCAGCTCTTCTCCACCCTTTTCTATaGTGCTGCAGTTGTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VKQGRWVRDNPKASFAALLHPFL*CCSCGC Trigger: GCAGCCACAACTGCAGCATCATAGAAAAGGGTGGAG...AAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTGTGATTCGCCAGGGATaGCCTGTGTGCAGGATATAC | + |
|
Preference number: 2 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRVIRQG*PVCRIY Trigger: GTATATCCTGCACACAGGTCATCCCTGGCGAATCAC...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGTACAGCATACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTTGCTGCAGTTGTGGCTaGATAGGTGCTGGCACCATG | + |
|
Preference number: 2 (lower is better) Translates to: LSTAYDKRLGWGGHADTACCSCG*IGAGTM Trigger: CATGGTGCCAGCACCTATGCAGCCACAACTGCAGCA...AGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATACTGCTTCAGCATCCTaGACAGAACAGGAGATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHTASAS*TEQEIQ Trigger: CTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGT...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGTGGTCCAGGCACCTGTaGGGGTTTCTGGACTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSFLIVWARANAFFLCWWSRHL*GFLDWW Trigger: CCACCAGTCCAGAAACCCCCACAGGTGCCTGGACCA...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGATGATGCTGCAGTTGTaGCTGCATAGGTGCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GVISISVLPSSVTGAAIQMMLQL*LHRCWH Trigger: GTGCCAGCACCTATGCAGCCACAACTGCAGCATCAT...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGTTGTGGTTCAGCTGTTaGCTCAGTGGCCGGCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CSHCFSILHRTGDPVTHMLWFSC*LSGRPS Trigger: GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAA...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACATACGACAAGAGGCTaGGATGGGGTGGACACGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PFCSHCFSILHRTGDPVTHTTRG*DGVDTQ Trigger: CTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATG...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGCCTGTGGTCCTGCCGTaGGGTCTGAATGTGTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: CSHCFSILHRTGDPVTHMPVVLP*GLNVSP Trigger: GGGTGACACATTCAGACCCCACGGCAGGACCACAGG...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGGCCTTCTTCCTTTGCTaGGCTCTTGAGAGCCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVAFFLC*ALESLT Trigger: TGTAAGGCTCTCAAGAGCCCAGCAAAGGAAGAAGGC...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGGGTTTCTGGACTGGTaGCAGCTTTTAATGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GVISISVLPSSVTGAAIQGFLDW*QLLMLW Trigger: CCAGAGCATTAAAAGCTGCCACCAGTCCAGAAACCC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGATACTGCTCCAGTTGTaGTTCAGCTGTTGGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVILLQL*FSCWLS Trigger: ACTGAGCCAACAGCTGAACCACAACTGGAGCAGTAT...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGCATACGACAAGAGGCTaGGATGGGGTGGACACGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLSFLIVWARANAFFLCWHTTRG*DGVDTQ Trigger: CTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATG...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAACAGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTGCAGCTCTTCCCATCAAAGAGAGGTaGCAGTGTGCTCTGAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: VKQGRWVRDNPKASFAALPIKER*QCALKP Trigger: AGGTTTCAGAGCACACTGCCACCTCTCTTTGATGGG...AAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTAAAATCCAGTGTGCCTaGCACCAGGGAATCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRKIQCA*HQGILL Trigger: AAGGAGGATTCCCTGGTGCCAGGCACACTGGATTTT...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAGTAGGAGACATCCTGTaGATTTTGGAAGCACCGCCC | + |
|
Preference number: 2 (lower is better) Translates to: MGASLLNHTTDFSRFQCLVGDIL*ILEAPP Trigger: GGGCGGTGCTTCCAAAATGCACAGGATGTCTCCTAC...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGATACTGCTCCAGTTGTaGTTCAGCTGTTGGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GVISISVLPSSVTGAAIQILLQL*FSCWLS Trigger: ACTGAGCCAACAGCTGAACCACAACTGGAGCAGTAT...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 90 bp | ATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTaGCCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ISRRHPVHFGSTAQC*PLSFLIVWARANAF Trigger: GAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTCCTACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTCCGTTCTGTAGTCACTaGTTCAGCATCCTGCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFPFCSH*FSILHR Trigger: TCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAACATCCTGTGCATTTTaGAAGCACCGCCCAGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: MGASLLNHTTDFSRFQCLTSCAF*KHRPVL Trigger: AAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGT...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGGGGTTTCTGGACTGGTaGCAGCTTTTAATGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CSHCFSILHRTGDPVTHMGFLDW*QLLMLW Trigger: CCAGAGCATTAAAAGCTGCCACCAGTCCAGAAACCC...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTACTTTCTGTAAGACATaGATAATACCTCGTGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRTFCKT*IIPRGW Trigger: CCAACCACGAGGTATTATTCATGTCTTACAGAAAGT...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTCTTCCATCCATAAAATaGGCACAATGTCTCGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFLPSIK*AQCLVG Trigger: CCCAACGAGACATTGTGCCCATTTTATGGATGGAAG...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | ATACATCCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCTTAATACAAAGGAGATaGAATCGGGTGGTCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IHPRCGEATSLIHVLKVALIQRR*NRVVFQ Trigger: TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAA...GGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTTTCTTAGAAAAAGAATaGTGCTTTCCCGCTCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ETSCAFWKHRPVLASFLPFLEKE*CFPALP Trigger: TGGAAGAGCGGGAAAGCATCATTCTTTTTCTAAGAA...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGCTTCCATCCATAAAATaGGCACAATGTCTCGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSFLIVWARANAFFLCWLPSIK*AQCLVG Trigger: CCCAACGAGACATTGTGCCCATTTTATGGATGGAAG...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAAAGTAGGAGGCAGCATTaGGAAGAGCTAAGAGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: IKVSQKRINRDDCGPVEESRRQH*EELRGY Trigger: GTAGCCTCTTAGCTCTTCTCAATGCTGCCTCCTACT...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAACCCAAAGGCTTCTTTTaGAGCTCTTTACTTCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: IKVSQKRINRDDCGPVEEPKGFF*SSLLPP Trigger: TGGTGGAAGTAAAGAGCTGCAAAAGAAGCCTTTGGG...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | CCGACCTCAGACATCCTGTGGTCCTGCCGTGGGGTCTaGATGTGTCACCCTGCCCTATCCACCCGGTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PTSDILWSCRGV*MCHPALSTRWS Trigger: GCTCCACCGGGTGGATAGGGCAGGGTGACACATTCAGACCCCACGGCAGGACCACAGGATGTCTGAGGTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | CCTGTGGTCCTGCCGTGGGGTCTGAATGTGTCACCCTaGCCTATCCACCCGGTGGAGCTCTCTGTGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PVVLPWGLNVSP*PIHPVELSVPH Trigger: ATGGGGCACAGAGAGCTCCACCGGGTGGATAGGGCAGGGTGACACATTCAGACCCCACGGCAGGACCACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | TGGGATGGGGTGGACACGCAGATACTGCTCCAGTTGTaGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: WDGVDTQILLQL*FSCWLSGRPST Trigger: GGTGGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | GCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTaGCTGCATAGGTGCTGGCACCATGGTCCAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AGPPPFSMMLQL*LHRCWHHGPGT Trigger: GGTGCCTGGACCATGGTGCCAGCACCTATGCAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | TTCCTGACCGACCTCAGACATCCTGTGGTCCTGCCGTaGGGTCTGAATGTGTCACCCTGCCCTATCCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: FLTDLRHPVVLP*GLNVSPCPIHP Trigger: CGGGTGGATAGGGCAGGGTGACACATTCAGACCCCACGGCAGGACCACAGGATGTCTGAGGTCGGTCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | CGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTaGTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RQEAGMGWTRRY*SSCGSAVGSVA Trigger: GGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | GCTCTTTACTTCCACCATCAGAGGCCCTCTCATTCCTaGCCGACCTCAGACATCCTGTGGTCCTGCCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALYFHHQRPSHS*PTSDILWSCRG Trigger: CCCACGGCAGGACCACAGGATGTCTGAGGTCGGTCAGGAATGAGAGGGCCTCTGATGGTGGAAGTAAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | GCATCCTGCACAGAACAGGAGATCCAGTCACACACATaGCTCACCGTGAAACAGGGCCGCTGGGTCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ASCTEQEIQSHT*LTVKQGRWVRD Trigger: GTCCCTGACCCAGCGGCCCTGTTTCACGGTGAGTCATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | TGTCACCCTGCCCTATCCACCCGGTGGAGCTCTCTGTaGCCCATCAAAGAGAGGTGGCAGTGTGCTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHPALSTRWSSL*PIKERWQCALK Trigger: TTTCAGAGCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGGGCAGGGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | GGTGGGGTGCCCATTAACCCAGACTTTCCTGTGTTATaGGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GGVPINPDFPVL*AQRPNLSRRQH Trigger: ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGGGTTAATGGGCACCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTGTTGTGGTTCAGCTGTaGGCTCAGTGGCCGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFVVVQL*AQWPAL Trigger: GAGGGCCGGCCACTGAGCCAACAGCTGAACCACAAC...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTACTGAGTAGGAGCAACTaGGCTGTGGGGTGGGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: MGASLLNHTTDFSRFQCLLSRSN*AVGWGA Trigger: GGCACCCCACCCCACAGCCAAGTTGCTCCTACTCAG...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | CAGAACAGGAGATCCAGTCACACACATGACTCACCGTaGAACAGGGCCGCTGGGTCAGGGACAACCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNRRSSHTHDSP*NRAAGSGTTQR Trigger: CCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCACGGTGAGTCATGTGTGTGACTGGATCTCCTGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | GGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTaGAGCTCTTTACTTCCACCATCAGAGGCCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPLGQGQPKGFF*SSLLPPSEALS Trigger: TGAGAGGGCCTCTGATGGTGGAAGTAAAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTAGCACCGCCCAGTGCTaGCCTCTTTCCTTCCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRSTAQC*PLSFLI Trigger: TATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTGCT...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGACATCCTGTGCATTTaGGAAGCACCGCCCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVISISVLPSSVTGAAIQDILCI*EAPPSA Trigger: AGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | CTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCTCTaGAACCTTATGGCATCCGGCCTCTGGCACAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCAPSKRGGSVL*NLMASGLWHKH Trigger: ATGCTTGTGCCAGAGGCCGGATGCCATAAGGTTTCAGAGCACACTGCCACCTCTCTTTGATGGGGCACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | GGAGCTTTGAGTACAGCATACGACAAGAGGCTGGGATaGGGTGGACACGCAGATACTGCTCCAGTTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GALSTAYDKRLG*GGHADTAPVVV Trigger: AACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAAAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | CATGACAGTGCTGAGTGGATGCCGCTCCTGAGAGGCTaGAATGATGACCGTTCTGTAGTCACTGCTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HDSAEWMPLLRG*NDDRSVVTASA Trigger: TGCTGAAGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTCAGCACTGTCATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | GCTTTGTCTGAACACCGCAGGAAAATCCAGTGTGCCTaGCACCAGGGAATCCTCCTTCTCACAAGAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ALSEHRRKIQCA*HQGILLLTREP Trigger: TGGCTCTCTTGTGAGAAGGAGGATTCCCTGGTGCCAGGCACACTGGATTTTCCTGCGGTGTTCAGACAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | ATAATAAAGAAGAGTGTGGCCTACGTCTGCCTCTCCTaGTTGCTAAGAGGGGGAGGGGATGCTCCCGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: IIKKSVAYVCLS*LLRGGGDAPES Trigger: ACTCTCGGGAGCATCCCCTCCCCCTCTTAGCAATCAGGAGAGGCAGACGTAGGCCACACTCTTCTTTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | CAGCAGAAGAGAATCCCATCTTCCCAAGCAGGACACTaGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQKRIPSSQAGH*SKQCTRVHQSL Trigger: AAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGAAGATGGGATTCTCTTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGTCTGGAAAAAGGACATaGTTCCTTCACTCAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLSGKRT*FLHSGF Trigger: AAATCCTGAGTGAAGGAACAATGTCCTTTTTCCAGA...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGTCTATGATGCTGCAGTaGTGGCTGCATAGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSFLIVWARANAFFLCWSMMLQ*WLHRCW Trigger: CCAGCACCTATGCAGCCACAACTGCAGCATCATAGA...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACAGTGGGCAATGGAGCTTaGAGTACAGCATACGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: PFCSHCFSILHRTGDPVTVGNGA*STAYDK Trigger: CTTGTCGTATGCTGTACTCAAAGCTCCATTGCCCAC...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | GGCAAGAGCAAACGCCTTCTTCCTTTGCTGGGCTCTTaGGAGCCTTACATGGCAACCTTAAGACTGCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GKSKRLLPLLGS*EPYMATLRLLN Trigger: GTTCAGCAGTCTTAAGGTTGCCATGTAAGGCTCTCAAGAGCCCAGCAAAGGAAGAAGGCGTTTGCTCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | AGGAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTaGTTGCCTCTTTCCTTCCTGATAGTTTGGGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRHPVHFGSTAQ*LPLSFLIVWAR Trigger: TCTTGCCCAAACTATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | AAGTCTCAAAGTCACAAGGATCATGACAGTGCTGAGTaGATGCCGCTCCTGAGAGGCTGGAATGATGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: KSQSHKDHDSAE*MPLLRGWNDDR Trigger: ACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTCAGCACTGTCATGATCCTTGTGACTTTGAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACAACCCAAAGGCTTCTTTaGCAGCTCTTTACTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PFCSHCFSILHRTGDPVTTQRLL*QLFTST Trigger: GGTGGAAGTAAAGAGCTGCAAAAGAAGCCTTTGGGT...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAATTTTTCTAGGGGCTTaGTCTGAACACCGCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MGASLLNHTTDFSRFQCLIFLGA*SEHRRK Trigger: TTTCCTGCGGTGTTCAGACAAAGCCCCTAGAAAAAT...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | GGAATCCTCCTTCTCACAAGAGAGCCAGCTCTAGGTTaGAGGGATAATTACAGGAAACAGTCTGCAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GILLLTREPALG*RDNYRKQSAGD Trigger: GTCTCCTGCAGACTGTTTCCTGTAATTATCCCTTCAACCTAGAGCTGGCTCTCTTGTGAGAAGGAGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR GCA 72 bp | CCTGTGTGCAGGATATACACATGTCACCTGTGCGAGTaGCAATCAGTAGGAGACATCCTGTGCATTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PVCRIYTCHLCE*QSVGDILCILE Trigger: TTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCACAGGTGACATGTGTATATCCTGCACACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | TGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTaGGGCAGCTATCCAGCTTTTAAAAGACCAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CHLNLRPSQFCH*GSYPAFKRPSP Trigger: TGGACTTGGTCTTTTAAAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CCA 72 bp | GTGGCCCCGGCTTATCAGCCTTTAATACAAAGGAGATaGAATCGGGTGGTCTTTCAAGGGAATTCTAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VAPAYQPLIQRR*NRVVFQGNSSC Trigger: GCAACTAGAATTCCCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTGTGCGAGTGCCAATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCTCTGGAAAAAGGACATaGTTCCTTCACTCAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SPVRVPISRRHPVHFGSTSGKRT*FLHSGF Trigger: AAATCCTGAGTGAAGGAACAATGTCCTTTTTCCAGA...GGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCACAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR TCA 72 bp | CATGGCAACCTTAAGACTGCTGAACCCGTAAAGGCTTaGAAGAACCCAAAGTCTCAAAGTCACAAGGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: HGNLKTAEPVKA*KNPKSQSHKDH Trigger: ATGATCCTTGTGACTTTGAGACTTTGGGTTCTTTCAAGCCTTTACGGGTTCAGCAGTCTTAAGGTTGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGGCTGCAGGCTTCTCCAGCTaGGAGCAGCACCTCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRCGEATSLIHVLKVAPAAGFSS*EQHLHR Trigger: GCGGTGGAGGTGCTGCTCCCAGCTGGAGAAGCCTGC...AGCCGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| 3UTR CAA 72 bp | GGCTGGGATGGGGTGGACACGCAGATACTGCTCCAGTaGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWDGVDTQILLQ*WFSCWLSGRPS Trigger: GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCGCAGGCTTCTCCAGCTaGGAGCAGCACCTCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSAGFSS*EQHLHR Trigger: GCGGTGGAGGTGCTGCTCCCAGCTGGAGAAGCCTGC...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCTTTCCAGGTAGGCCATaGCCTCACACACATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPVELSVPHQREVAVCFPGRP*PHTHPG Trigger: GCCTGGATGTGTGTGAGGGCATGGCCTACCTGGAAA...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGGCTTCTGTTGGGACTTCTTaGTCAGCTGTTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRCGEATSLIHVLKVAPASVGTS*SAVLPG Trigger: TCCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGA...AGCCGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | CATCCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGTGCCCATTTTTGTCTTaGACCCTCCACCAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HPRCGEATSLIHVLKVAPCPFLS*TLHQWI Trigger: GATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCA...CGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCATCTTAGCCCTGCTGTaGCAGGGGCTTTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSILALL*QGLFVS Trigger: GGAGACAAAAAGCCCCTGTCACAGCAGGGCTAAGAT...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGTCCGACAGGCAGCCGTaGTCCATGAACTCAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLSDRQP*SMNSNT Trigger: GGTGTTTGAGTTCATGGAGCACGGCTGCCTGTCGGA...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGGCTCAATCTCCACACACTTaGTTCTGGAGAGTTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRCGEATSLIHVLKVAPAQSPHT*FWRVQW Trigger: CCATTGAACTCTCCAGAATCAAGTGTGTGGAGATTG...AGCCGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGGCAGCCGTGCTCCATaGACTCAAACACCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQGSRAP*TQTPGR Trigger: TCTGCCTGGTGTTTGAGTTCATGGAGCACGGCTGCC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCCCAGGTCTCTGTGGATaGCACAAGCTTTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPVELSVPHQREVAVCPGLCG*HKLFPG Trigger: ACCTGGAAAAAGCTTGTGTCATCCACAGAGACCTGG...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCGAACACCTCTGGGGATaGCCACTTCACTGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPVELSVPHQREVAVCEHLWG*PLHWEF Trigger: AAATTCCCAGTGAAGTGGGCATCCCCAGAGGTGTTC...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCGAACACCTCTGGGGATaGCCACTTCACTGGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSEHLWG*PLHWEF Trigger: AAATTCCCAGTGAAGTGGGCATCCCCAGAGGTGTTC...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | TACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCCAGTTGTGGTTCAAACACCAGGCAGATaGGGGCTTGCTCCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YDKRLGWGGHADTAPVVVQTPGR*GLAPGT Trigger: TGTGCCTGGAGCAAGCCCCCATCTGCCTGGTGTTTG...AACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCAAACACCAGGCAGATaGGGGCTTGCTCCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQQTPGR*GLAPGT Trigger: TGTGCCTGGAGCAAGCCCCCATCTGCCTGGTGTTTG...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGGGGTGGCCGGTCTTCTaGTTTCTCTTTCCAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLGWPVF*FLFPAM Trigger: CATTGCTGGAAAGAGAAACCAGAAGACCGGCCACCC...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 72 bp | AGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTaGCAGCTCTTTACTTCCACCATCAGAGGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAAGSGTTQRLL*QLFTSTIRGPL Trigger: GAGAGGGCCTCTGATGGTGGAAGTAAAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCAAACGACCACACATCTaGCTTGCTGCTATAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSKRPHI*LAAIAT Trigger: AGTCGCTATAGCAGCAAGTCAGATGTGTGGTCGTTT...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | TCACCTGTGCGAGTGCCAATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCGTCAGCACCCAGCGCTaGCGACTCTCACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVPISRRHPVHFGSTVSTQR*RLSQSG Trigger: TCCAGACTGTGAGAGTCGGCAGCGCTGGGTGCTGAC...GGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCACAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACAGTCAGCACCCAGCGCTaGCGACTCTCACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFCSHCFSILHRTGDPVTVSTQR*RLSQSG Trigger: TCCAGACTGTGAGAGTCGGCAGCGCTGGGTGCTGAC...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGTCCGACAGGCAGCCGTaGTCCATGAACTCAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQSDRQP*SMNSNT Trigger: GGTGTTTGAGTTCATGGAGCACGGCTGCCTGTCGGA...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCCCACGTAGTAGCGCTTaGGGCTGTCATTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPVELSVPHQREVAVCPRSSA*GCHLFL Trigger: AAGAAACAAATGACAGCCCCAAGCGCTACTACGTGG...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGGATGCCCACTTCACTaGGAATTTGGTGCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQGCPLH*EFGARG Trigger: TCCACGGGCACCAAATTCCCAGTGAAGTGGGCATCC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGAAAGGAGAACACCTCTaGGGATGCCCACTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVKGEHL*GCPLHW Trigger: CCAGTGAAGTGGGCATCCCCAGAGGTGTTCTCCTTT...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 72 bp | CACCGCCCAGTGCTTGCCTCTTTCCTTCCTGATAGTTaGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPVLASFLPDS*GKSKRLLPLLG Trigger: GCCCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTCCTCCATTGTACTGGTaGTACTGGATGAGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRPPLYW*YWMRRG Trigger: CCCTCTCCTCATCCAGTATCACCAGTACAATGGAGG...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATCCGACTCTCACAGTCTaGAGCAAACACATACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHPTLTV*SKHIQE Trigger: CTCCTGTATGTGTTTGCTCCAGACTGTGAGAGTCGG...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGCTCCTGAGGGTCGTTaGTTTGGTAGTCGTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQAPEGR*FGSRTR Trigger: CCTTGTACGACTACCAAACCAACGACCCTCAGGAGC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTAAAGGAGAACACCTCTaGGGATGCCCACTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTAKGEHL*GCPLHW Trigger: CCAGTGAAGTGGGCATCCCCAGAGGTGTTCTCCTTT...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 72 bp | TGCGAGTGCCAATCAGTAGGAGACATCCTGTGCATTTaGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CECQSVGDILCI*EAPPSACLFPS Trigger: GGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTCCTCCATTGTACTGGTaGTACTGGATGAGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETSCAFWKHRPVLASFLPPPLYW*YWMRRG Trigger: CCCTCTCCTCATCCAGTATCACCAGTACAATGGAGG...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTACCACCTTGTCCTTGTTaGGCCAGTAGCCGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLPPCPC*ASSRDA Trigger: TGCATCTCGGCTACTGGCTCAACAAGGACAAGGTGG...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTCCTGAATGGTCTTaGTGGCCACCTTGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQLPEWS*WPPCPC Trigger: ACAAGGACAAGGTGGCCATCAAGACCATTCAGGAAG...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGGGCAGCCGTGCTCCATaGACTCAAACACCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSHCFSILHRTGDPVTHMGSRAP*TQTPGR Trigger: TCTGCCTGGTGTTTGAGTTCATGGAGCACGGCTGCC...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGTCAGCACCCAGCGCTaGCGACTCTCACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APAYQPLIQRRWNRVVFQVSTQR*RLSQSG Trigger: TCCAGACTGTGAGAGTCGGCAGCGCTGGGTGCTGAC...TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR GCA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACATTTCCAGGTAGGCCATaGCCTCACACACATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFCSHCFSILHRTGDPVTFPGRP*PHTHPG Trigger: GCCTGGATGTGTGTGAGGGCATGGCCTACCTGGAAA...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCCCTCTCTATTTGCAGATACATCCCCGCTGTGGTGAGGCCACATCACCCGACTCTCACAGTCTaGAGCAAACACATACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSICRYIPAVVRPHHPTLTV*SKHIQE Trigger: CTCCTGTATGTGTTTGCTCCAGACTGTGAGAGTCGG...GTGATGTGGCCTCACCACAGCGGGGATGTATCTGCAAATAGAGAGGGGGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTGCTGCCAGGTCTCTGTaGATGACACAAGCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRAARSL*MTQAFS Trigger: GGAAAAAGCTTGTGTCATCCACAGAGACCTGGCAGC...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAGGATGCCCACTTCACTaGGAATTTGGTGCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLGCPLH*EFGARG Trigger: TCCACGGGCACCAAATTCCCAGTGAAGTGGGCATCC...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTGGGTGGCCGGTCTTCTaGTTTCTCTTTCCAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ETSCAFWKHRPVLASFLPGWPVF*FLFPAM Trigger: CATTGCTGGAAAGAGAAACCAGAAGACCGGCCACCC...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTTCTGTTGGGACTTCTTaGTCAGCTGTTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTASVGTS*SAVLPG Trigger: TCCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGA...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTAGGAAGAGGCTTCTTTaGAGCATTCTTGGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTARKRLL*SILGWV Trigger: GACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCT...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAACAGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTGCAGCTCTTAGTCGTACAAGGCAATaGCCAGGGTTTCTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKQGRWVRDNPKASFAALSRTRQ*PGFLQV Trigger: AACCTGAAGAAACCCTGGTCATTGCCTTGTACGACT...AAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCCCTCTCTATTTGCAGATACATCCCCGCTGTGGTGAGGCCACATCACAGTCGTACAAGGCAATaGCCAGGGTTTCTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLSICRYIPAVVRPHHSRTRQ*PGFLQV Trigger: AACCTGAAGAAACCCTGGTCATTGCCTTGTACGACT...GTGATGTGGCCTCACCACAGCGGGGATGTATCTGCAAATAGAGAGGGGGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGTACAGCATACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTTGCCCATTTTTGTCTTaGACCCTCCACCAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSTAYDKRLGWGGHADTACPFLS*TLHQWI Trigger: GATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCA...AGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTCAGCTTTGTCGCGGCTaGTGCTTTTATTGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRQLCRG*CFYCTT Trigger: AGTGGTACAATAAAAGCATCAGCCGCGACAAAGCTG...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGCCACCTTGTCCTTGTTaGGCCAGTAGCCGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSFLIVWARANAFFLCWPPCPC*ASSRDA Trigger: TGCATCTCGGCTACTGGCTCAACAAGGACAAGGTGG...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGTACAGCATACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCTTCCTGAATGGTCTTaGTGGCCACCTTGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTAYDKRLGWGGHADTALPEWS*WPPCPC Trigger: ACAAGGACAAGGTGGCCATCAAGACCATTCAGGAAG...AGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTTGCACCAGTTTGGGGTaGGAGAGTTTCATCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTACTSLG*ESFIMT Trigger: AGTCATGATGAAACTCTCTCACCCCAAACTGGTGCA...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCGTGGAGCTGGTATATTaGTCATCAAGGACAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSVELVY*SSRTNL Trigger: AAGATTTGTCCTTGATGATCAATATACCAGCTCCAC...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTCCAGCAATGATTCATaGTCTGGTAGACATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVSSNDS*SGRHDR Trigger: CCTGTCATGTCTACCAGATCATGAATCATTGCTGGA...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | ATACATCCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCAGGTAACTGCTTGGTaGATATCCTTCATGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IHPRCGEATSLIHVLKVAQVTAW*ISFMPI Trigger: AATGGGCATGAAGGATATGCACCAAGCAGTTACCTG...GGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGGATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR GCA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCTTTCTACCAGGTAACTaGTTGGTGCATATCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQILLQLWFSCWLSGRPSFLPGN*LVHILH Trigger: ATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAA...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGTACAGCATACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCAAACAGTTTCTGGCTaGCAGGTCTCTGTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTAYDKRLGWGGHADTAQTVSG*QVSVDD Trigger: GTCATCCACAGAGACCTGGCAGCCAGAAACTGTTTG...AGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTCAAACAGTTTCTGGCTaGCAGGTCTCTGTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETSCAFWKHRPVLASFLPQTVSG*QVSVDD Trigger: GTCATCCACAGAGACCTGGCAGCCAGAAACTGTTTG...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTTCACTGGGAATTTGGTaGCCGTGGAGCTGGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRSLGIW*PWSWYI Trigger: AATATACCAGCTCCACGGGCACCAAATTCCCAGTGA...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGTCACTGGGAATTTGGTaGCCGTGGAGCTGGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQSLGIW*PWSWYI Trigger: AATATACCAGCTCCACGGGCACCAAATTCCCAGTGA...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACAGCTCCTGAGGGTCGTTaGTTTGGTAGTCGTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCSHCFSILHRTGDPVTAPEGR*FGSRTR Trigger: CCTTGTACGACTACCAAACCAACGACCCTCAGGAGC...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTTACCAGGTAACTGCTTaGTGCATATCCTTCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTAYQVTA*CISFMP Trigger: GGGCATGAAGGATATGCACCAAGCAGTTACCTGGTA...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTCCACGTAGTAGCGCTTaGGGCTGTCATTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTAPRSSA*GCHLFL Trigger: AAGAAACAAATGACAGCCCCAAGCGCTACTACGTGG...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGGTTAGCTCTGAGGGTTaGATCACCCACTTCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQVSSEG*ITHFPY Trigger: ATATGGGAAGTGGGTGATCCAACCCTCAGAGCTAAC...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | TCACCTGTGCGAGTGCCAATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCCCACCAAACAGTTTCTaGCTGCCAGGTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVPISRRHPVHFGSTPPNSF*LPGLCG Trigger: TCCACAGAGACCTGGCAGCCAGAAACTGTTTGGTGG...GGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCACAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGTACAGCATACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTTCTGTTGGGACTTCTTaGTCAGCTGTTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTAYDKRLGWGGHADTASVGTS*SAVLPG Trigger: TCCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGA...AGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTATGCTGTACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTACCAGGTCTCTGTGGATaGCACAAGCTTTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLPGLCG*HKLFPG Trigger: ACCTGGAAAAAGCTTGTGTCATCCACAGAGACCTGG...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCCAGTTGTGGTTGGATTTTGCCTTCACTaGAGACTTCCCACATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YDKRLGWGGHADTAPVVVGFCLH*RLPTSV Trigger: TACTGATGTGGGAAGTCTTCAGTGAAGGCAAAATCC...AACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCAGGTAACTGCTTGGTaGATATCCTTCATGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GVISISVLPSSVTGAAIQQVTAW*ISFMPI Trigger: AATGGGCATGAAGGATATGCACCAAGCAGTTACCTG...CTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGTTTCTACCAGGTAACTaGTTGGTGCATATCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLFLPGN*LVHILH Trigger: ATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAA...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTACCGACTCTCACAGTCTaGAGCAAACACATACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLPTLTV*SKHIQE Trigger: CTCCTGTATGTGTTTGCTCCAGACTGTGAGAGTCGG...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGGGTTTCAAGGTTATTTaGAGATTTTTCTACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPRCGEATSLIHVLKVAPGFKVI*RFFYQV Trigger: TACCTGGTAGAAAAATCTCCAAATAACCTTGAAACC...CGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CCA 90 bp | GAGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTTGCCTCTTTCCTTCCTAGAGCTGCACCAGTTTaGGGTGAGAGAGTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSCAFWKHRPVLASFLPRAAPV*GERVSS Trigger: TGATGAAACTCTCTCACCCCAAACTGGTGCAGCTCT...AGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAGCTGCCAGGTCTCTGTaGATGACACAAGCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLAARSL*MTQAFS Trigger: GGAAAAAGCTTGTGTCATCCACAGAGACCTGGCAGC...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGCCACCAAACAGTTTCTaGCTGCCAGGTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSHCFSILHRTGDPVTHMPPNSF*LPGLCG Trigger: TCCACAGAGACCTGGCAGCCAGAAACTGTTTGGTGG...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTGGAATTTGGTGCCCGTaGAGCTGGTATATTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: EWMPLLRGWNDDRSVVTAGIWCP*SWYIDH Trigger: ATGATCAATATACCAGCTCCACGGGCACCAAATTCC...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 72 bp | GGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGGCTCTaGAGAGCCTTACATGGCAACCTTAAGACTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQEQTPSSFAGL*RALHGNLKTAE Trigger: TTCAGCAGTCTTAAGGTTGCCATGTAAGGCTCTCAAGAGCCCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| 3UTR CAA 72 bp | AGACATCCTGTGCATTTTGGAAGCACCGCCCAGTGCTaGCCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHPVHFGSTAQC*PLSFLIVWARA Trigger: TGCTCTTGCCCAAACTATCAGGAAGGAAAGAGGCAAGCACTGGGCGGTGCTTCCAAAATGCACAGGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TCACCTGTGCGAGTGCCAATCAGTAGGAGACATCCTGTGCATTTTGGAAGCACCAGGAAGAGGCTTCTTTaGAGCATTCTTGGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVPISRRHPVHFGSTRKRLL*SILGWV Trigger: GACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCT...GGTGCTTCCAAAATGCACAGGATGTCTCCTACTGATTGGCACTCGCACAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGTGCCCATTTTTGTCTTaGACCCTCCACCAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CSHCFSILHRTGDPVTHMCPFLS*TLHQWI Trigger: GATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCA...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTATGCACCAGTTTGGGGTaGGAGAGTTTCATCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLCTSLG*ESFIMT Trigger: AGTCATGATGAAACTCTCTCACCCCAAACTGGTGCA...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGGGCTCCTGAGGGTCGTTaGTTTGGTAGTCGTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLSAFNTKEMESGGLSRAPEGR*FGSRTR Trigger: CCTTGTACGACTACCAAACCAACGACCCTCAGGAGC...CCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTCAATCTCCACACACTTaGTTCTGGAGAGTTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFQSPHT*FWRVQW Trigger: CCATTGAACTCTCCAGAATCAAGTGTGTGGAGATTG...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGCAGCTTTGTCGCGGCTaGTGCTTTTATTGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSFLIVWARANAFFLCWQLCRG*CFYCTT Trigger: AGTGGTACAATAAAAGCATCAGCCGCGACAAAGCTG...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGAAACGACCACACATCTaGCTTGCTGCTATAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSFLIVWARANAFFLCWKRPHI*LAAIAT Trigger: AGTCGCTATAGCAGCAAGTCAGATGTGTGGTCGTTT...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACAGGATTTTGCCTTCACTaGAGACTTCCCACATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFCSHCFSILHRTGDPVTGFCLH*RLPTSV Trigger: TACTGATGTGGGAAGTCTTCAGTGAAGGCAAAATCC...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTTCCAGCAATGATTCATaGTCTGGTAGACATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFSSNDS*SGRHDR Trigger: CCTGTCATGTCTACCAGATCATGAATCATTGCTGGA...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGGTTAGCTCTGAGGGTTaGATCACCCACTTCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSFLIVWARANAFFLCWVSSEG*ITHFPY Trigger: ATATGGGAAGTGGGTGATCCAACCCTCAGAGCTAAC...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAGGAATTTGGTGCCCGTaGAGCTGGTATATTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLGIWCP*SWYIDH Trigger: ATGATCAATATACCAGCTCCACGGGCACCAAATTCC...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAAGGAAGAGGCTTCTTTaGAGCATTCTTGGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APAYQPLIQRRWNRVVFQRKRLL*SILGWV Trigger: GACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCT...TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR TCA 90 bp | CCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGGCAGCTTTGTCGCGGCTaGTGCTTTTATTGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSAFNTKEMESGGLSRQLCRG*CFYCTT Trigger: AGTGGTACAATAAAAGCATCAGCCGCGACAAAGCTG...CCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CCA 90 bp | GCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAATACCAGGTAACTGCTTaGTGCATATCCTTCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APAYQPLIQRRWNRVVFQYQVTA*CISFMP Trigger: GGGCATGAAGGATATGCACCAAGCAGTTACCTGGTA...TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CCA 90 bp | CCAGACTTTCCTGTGTTATGCGCTCAGCGGCCCAACCTCAGTAGGAGGCAGCATGGTTTCAAGGTTATTTaGAGATTTTTCTACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDFPVLCAQRPNLSRRQHGFKVI*RFFYQV Trigger: TACCTGGTAGAAAAATCTCCAAATAACCTTGAAACC...ATGCTGCCTCCTACTGAGGTTGGGCCGCTGAGCGCATAACACAGGAAAGTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGGTGGAGCTGGTATATTaGTCATCAAGGACAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSHCFSILHRTGDPVTHMVELVY*SSRTNL Trigger: AAGATTTGTCCTTGATGATCAATATACCAGCTCCAC...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAATTTCTACCAGGTAACTaGTTGGTGCATATCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: APAYQPLIQRRWNRVVFQFLPGN*LVHILH Trigger: ATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAA...TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAGGTTTCAAGGTTATTTaGAGATTTTTCTACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGASLLNHTTDFSRFQCLGFKVI*RFFYQV Trigger: TACCTGGTAGAAAAATCTCCAAATAACCTTGAAACC...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAAATCTTAGCCCTGCTGTaGCAGGGGCTTTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKVSQKRINRDDCGPVEEILALL*QGLFVS Trigger: GGAGACAAAAAGCCCCTGTCACAGCAGGGCTAAGAT...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAATACCAGGTAACTGCTTaGTGCATATCCTTCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKVSQKRINRDDCGPVEEYQVTA*CISFMP Trigger: GGGCATGAAGGATATGCACCAAGCAGTTACCTGGTA...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAAAGAGCTGCACCAGTTTaGGGTGAGAGAGTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IKVSQKRINRDDCGPVEERAAPV*GERVSS Trigger: TGATGAAACTCTCTCACCCCAAACTGGTGCAGCTCT...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 90 bp | GACCCCGCTGACTTCGAAGGTAATCCGACAGGCAGCCGTGCTCCATaGACTCAAACACCAGGCAGATGGGGGCTTGCTCCAGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: DPADFEGNPTGSRAP*TQTPGRWGLAPGTP Trigger: GGGTGTGCCTGGAGCAAGCCCCCATCTGCCTGGTGTTTGAGTTCATGGAGCACGGCTGCCTGTCGGATTACCTTCGAAGTCAGCGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | CCGTATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGCAGGCAGATGGGGGCTaGCTCCAGGCACACCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PYGGQSPKPHHRLLSVPVQADGG*LQAHPI Trigger: TATGGGGTGTGCCTGGAGCAAGCCCCCATCTGCCTG...CACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCATACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCTCCACGACCTCGGAATaGCTTCGGTTTTCGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PIHPVELSVPHQREVAVCSTTSE*LRFSYG Trigger: CCCATACGAAAACCGAAGCAATTCCGAGGTCGTGGA...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 90 bp | AACTGCCCGCTGCCAATCTCCTGCACGAACGTTAGCTCTGAGGGTTaGATCACCCACTTCCCATATCTTAGCCCTGCTGTGACAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NCPLPISCTNVSSEG*ITHFPYLSPAVTGA Trigger: AGCCCCTGTCACAGCAGGGCTAAGATATGGGAAGTGGGTGATCCAACCCTCAGAGCTAACGTTCGTGCAGGAGATTGGCAGCGGGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | ACGCAGATACTGCTCCAGTTGTGGTTCAGCTGTTGGCTCAGTGGCCGGCCCTCCCTACCAGGTAACTGCTaGGTGCATATCCTTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQILLQLWFSCWLSGRPSLPGNC*VHILHA Trigger: GGCATGAAGGATATGCACCAAGCAGTTACCTGGTAG...GGAGGGCCGGCCACTGAGCCAACAGCTGAACCACAACTGGAGCAGTATCTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 90 bp | GCTCTGAGGGTTGGATCACCCACTTCCCATATCTTAGCCCTGCTGTaGCAGGGGCTTTTTGTCTCCAGGAGCAAACTGGATAGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALRVGSPTSHILALL*QGLFVSRSKLDSGV Trigger: GACTCCGCTATCCAGTTTGCTCCTGGAGACAAAAAGCCCCTGTCACAGCAGGGCTAAGATATGGGAAGTGGGTGATCCAACCCTCAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS GCA 90 bp | GATCTCGGAGCTGTCCAGCAGGTAGTACTCTTCATCACACCGCAGTaGGAGCTCCTGAGGGTCGTTGGTTTGGTAGTCGTACAAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLGAVQQVVLFITPQ*ELLRVVGLVVVQGN Trigger: ATTGCCTTGTACGACTACCAAACCAACGACCCTCAGGAGCTCGCACTGCGGTGTGATGAAGAGTACTACCTGCTGGACAGCTCCGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGTTCTGTTGGGACTTCTaGATCAGCTGTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLFCWDF*ISCSSR Trigger: CCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGAA...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTTCCACGACCTCGGAATaGCTTCGGTTTTCGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRSTTSE*LRFSYG Trigger: CCCATACGAAAACCGAAGCAATTCCGAGGTCGTGGA...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 90 bp | CATGACAGGAGGCCAGGCGGGGCTTGTATAACCGAAAGCCAGTGCTaGTATCTTCCACGACCTCGGAATTGCTTCGGTTTTCGTATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HDRRPGGACITESQC*YLPRPRNCFGFRMG Trigger: TCCCATACGAAAACCGAAGCAATTCCGAGGTCGTGGAAGATATCAGCACTGGCTTTCGGTTATACAAGCCCCGCCTGGCCTCCTGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 90 bp | GTGCGAGCTCCTGAGGGTCGTTGGTTTGGTAGTCGTACAAGGCAATaGCCAGGGTTTCTTCAGGTTCCTGAAATGACCGCCTGTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRAPEGRWFGSRTRQ*PGFLQVPEMTACCL Trigger: AAGACAACAGGCGGTCATTTCAGGAACCTGAAGAAACCCTGGTCATTGCCTTGTACGACTACCAAACCAACGACCCTCAGGAGCTCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCCAGTTGTGGTTGAGGAAGAGGCTTCTTaGAAGCATTCTTGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YDKRLGWGGHADTAPVVVEEEAS*KHSWMG Trigger: ACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCTC...AACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTGAGGAAGAGGCTTCTTaGAAGCATTCTTGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWMPLLRGWNDDRSVVTAEEEAS*KHSWMG Trigger: ACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCTC...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TACGACAAGAGGCTGGGATGGGGTGGACACGCAGATACTGCTCCAGTTGTGGTTATGCCCATTTTTGTCTaGAACCCTCCACCAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YDKRLGWGGHADTAPVVVMPIFV*NPPPVD Trigger: ATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCAT...AACCACAACTGGAGCAGTATCTGCGTGTCCACCCCATCCCAGCCTCTTGTCGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | CATCCCCGCTGTGGTGAGGCCACATCACTGATCCACGTTCTGAAGGTGGCCCCGAGGTTTCAAGGTTATTaGGAGATTTTTCTACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPRCGEATSLIHVLKVAPRFQGY*EIFLPG Trigger: ACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCT...CGGGGCCACCTTCAGAACGTGGATCAGTGATGTGGCCTCACCACAGCGGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | GTTGGCTCAGTGGCCGGCCCTCCACCCTTTTCTATGATGCTGCAGTTGTGGCTGAGAAGTTTTTCAGCTTaGTCGCGGCTGATGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VGSVAGPPPFSMMLQLWLRSFSA*SRLMLL Trigger: TAAAAGCATCAGCCGCGACAAAGCTGAAAAACTTCT...CAGCCACAACTGCAGCATCATAGAAAAGGGTGGAGGGCCGGCCACTGAGCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | CCGTTCTGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACCAAAGTCGGACACCTaGATGACCTGGTTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PFCSHCFSILHRTGDPVTPKSDT*MTWFSP Trigger: GGGAGAAAACCAGGTCATCAAGGTGTCCGACTTTGG...TGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACAGAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 90 bp | CCTCTGGGGATGCCCACTTCACTGGGAATTTGGTGCCCGTGGAGCTaGTATATTGATCATCAAGGACAAATCTTGTCATCCCAAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGMPTSLGIWCPWS*YIDHQGQILSSQSR Trigger: CCGACTTTGGGATGACAAGATTTGTCCTTGATGATCAATATACCAGCTCCACGGGCACCAAATTCCCAGTGAAGTGGGCATCCCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | CCTATCCACCCGGTGGAGCTCTCTGTGCCCCATCAAAGAGAGGTGGCAGTGTGCAGGTTTCAAGGTTATTaGGAGATTTTTCTACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PIHPVELSVPHQREVAVCRFQGY*EIFLPG Trigger: ACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCT...GCACACTGCCACCTCTCTTTGATGGGGCACAGAGAGCTCCACCGGGTGGATAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGCCAAAGTCGGACACCTaGATGACCTGGTTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSHCFSILHRTGDPVTHMPKSDT*MTWFSP Trigger: GGGAGAAAACCAGGTCATCAAGGTGTCCGACTTTGG...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 90 bp | TTCTTCTTTAAGGGTCAGCACCCAGCGCTGCCGACTCTCACAGTCTaGAGCAAACACATACAGGAGATAGTTGTCATGCACGACCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFFKGQHPALPTLTV*SKHIQEIVVMHDLK Trigger: TTTCAGGTCGTGCATGACAACTATCTCCTGTATGTGTTTGCTCCAGACTGTGAGAGTCGGCAGCGCTGGGTGCTGACCCTTAAAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAATCTCCGTCCTTCCCAGTTCTGTCACTGGGGCAGCTATCCAGCTTTTTCTGTTGGGACTTCTaGATCAGCTGTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQSPSFPVLSLGQLSSFFCWDF*ISCSSR Trigger: CCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGAA...AAAGCTGGATAGCTGCCCCAGTGACAGAACTGGGAAGGACGGAGATTGAGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTTCTGTTGGGACTTCTaGATCAGCTGTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPGLSAFNTKEMESGGLFCWDF*ISCSSR Trigger: CCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGAA...AAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | GAGTGGATGCCGCTCCTGAGAGGCTGGAATGATGACCGTTCTGTAGTCACTGCTACAATCTCCACACACTaGATTCTGGAGAGTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EWMPLLRGWNDDRSVVTATISTH*ILESSM Trigger: CATTGAACTCTCCAGAATCAAGTGTGTGGAGATTGT...AGCAGTGACTACAGAACGGTCATCATTCCAGCCTCTCAGGAGCGGCATCCACTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGGGCCAGTCTCCTAAACCACACCACAGACTTCTCTCGGTTCCAGTGTTTAATGCCCATTTTTGTCTaGAACCCTCCACCAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MGASLLNHTTDFSRFQCLMPIFV*NPPPVD Trigger: ATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCAT...TAAACACTGGAACCGAGAGAAGTCTGTGGTGTGGTTTAGGAGACTGGCCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTATGCCCATTTTTGTCTaGAACCCTCCACCAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGPGLSAFNTKEMESGGLMPIFV*NPPPVD Trigger: ATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCAT...AAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTCCTTCCTGATAGTTTGGGCAAGAGCAAACGCCTTCTTCCTTTGCTGGCTACCAGGTAACTGCTaGGTGCATATCCTTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSFLIVWARANAFFLCWLPGNC*VHILHA Trigger: GGCATGAAGGATATGCACCAAGCAGTTACCTGGTAG...CCAGCAAAGGAAGAAGGCGTTTGCTCTTGCCCAAACTATCAGGAAGGAAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GTGAAACAGGGCCGCTGGGTCAGGGACAACCCAAAGGCTTCTTTTGCAGCTCTTTTTTCGTATGGGATTTaGCCTTCACTGAAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKQGRWVRDNPKASFAALFSYGI*PSLKTS Trigger: GGAAGTCTTCAGTGAAGGCAAAATCCCATACGAAAA...AAGAGCTGCAAAAGAAGCCTTTGGGTTGTCCCTGACCCAGCGGCCCTGTTTCAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGCAGGACACTGGAGTAAGCAGTGCACACGCGTCCATCAAAGCCTTCGTTTTTCGTATGGGATTTaGCCTTCACTGAAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQAGHWSKQCTRVHQSLRFSYGI*PSLKTS Trigger: GGAAGTCTTCAGTGAAGGCAAAATCCCATACGAAAA...ACGAAGGCTTTGATGGACGCGTGTGCACTGCTTACTCCAGTGTCCTGCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCGGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAACTACCAGGTAACTGCTaGGTGCATATCCTTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: APAYQPLIQRRWNRVVFQLPGNC*VHILHA Trigger: GGCATGAAGGATATGCACCAAGCAGTTACCTGGTAG...TTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | ATTAAGGTTTCCCAAAAGAGAATAAACAGAGATGATTGTGGACCAGTTGAGGAACAGGCAGATGGGGGCTaGCTCCAGGCACACCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: IKVSQKRINRDDCGPVEEQADGG*LQAHPI Trigger: TATGGGGTGTGCCTGGAGCAAGCCCCCATCTGCCTG...TTCCTCAACTGGTCCACAATCATCTCTGTTTATTCTCTTTTGGGAAACCTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGAGAAGTTTTTCAGCTTaGTCGCGGCTGATGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSHCFSILHRTGDPVTHMRSFSA*SRLMLL Trigger: TAAAAGCATCAGCCGCGACAAAGCTGAAAAACTTCT...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGGGAATGAGGAAGAGGCTTCTTaGAAGCATTCTTGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AYQPLIQRRWNRVVFQGNEEEAS*KHSWMG Trigger: ACCCATCCAAGAATGCTTCAAAGAAGCCTCTTCCTC...ATTCCCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCACTGCTTCAGCATCCTGCACAGAACAGGAGATCCAGTCACACACATGAGGTTTCAAGGTTATTaGGAGATTTTTCTACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSHCFSILHRTGDPVTHMRFQGY*EIFLPG Trigger: ACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCT...CATGTGTGTGACTGGATCTCCTGTTCTGTGCAGGATGCTGAAGCAGTGACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS GCA 90 bp | GGTTTCAAGGTTATTTGGAGATTTTTCTACCAGGTAACTGCTTGGTaGATATCCTTCATGCCCATTTTTGTCTTGAACCCTCCACCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFKVIWRFFYQVTAW*ISFMPIFVLNPPPV Trigger: CACTGGTGGAGGGTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAAAATCTCCAAATAACCTTGAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGGGAAAGAAGTTTTTCAGCTTaGTCGCGGCTGATGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLSAFNTKEMESGGLSRERSFSA*SRLMLL Trigger: TAAAAGCATCAGCCGCGACAAAGCTGAAAAACTTCT...TTCCCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS-3UTR CAA 90 bp | GCTTATCAGCCTTTAATACAAAGGAGATGGAATCGGGTGGTCTTTCAAGGGAATACAATCTCCACACACTaGATTCTGGAGAGTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AYQPLIQRRWNRVVFQGNTISTH*ILESSM Trigger: CATTGAACTCTCCAGAATCAAGTGTGTGGAGATTGT...ATTCCCTTGAAAGACCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101306.4 |
||
| CDS GCA 90 bp | ACTCATAGGTTTCAAGGTTATTTGGAGATTTTTCTACCAGGTAACTaGTTGGTGCATATCCTTCATGCCCATTTTTGTCTTGAACCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: THRFQGYLEIFLPGN*LVHILHAHFCLEPS Trigger: GGAGGGTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCTATGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CCA 90 bp | ATAGGTTTCAAGGTTATTTGGAGATTTTTCTACCAGGTAACTGCTTaGTGCATATCCTTCATGCCCATTTTTGTCTTGAACCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IGFKVIWRFFYQVTA*CISFMPIFVLNPPP Trigger: TGGTGGAGGGTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS GCA 72 bp | GCCAGTAGCCGAGATGCACCAGCCCAAACTGCCCGCTaGCAATCTCCTGCACGAACGTTAGCTCTGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSRDAPAQTAR*QSPARTLALRV Trigger: AACCCTCAGAGCTAACGTTCGTGCAGGAGATTGGCAGCGGGCAGTTTGGGCTGGTGCATCTCGGCTACTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS GCA 72 bp | AGATGCACCAGCCCAAACTGCCCGCTGCCAATCTCCTaGACGAACGTTAGCTCTGAGGGTTGGATCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RCTSPNCPLPIS*TNVSSEGWITH Trigger: GTGGGTGATCCAACCCTCAGAGCTAACGTTCGTGCAGGAGATTGGCAGCGGGCAGTTTGGGCTGGTGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | GACTTCGAAGGTAATCCGACAGGCAGCCGTGCTCCATaGACTCAAACACCAGGCAGATGGGGGCTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DFEGNPTGSRAP*TQTPGRWGLAP Trigger: TGGAGCAAGCCCCCATCTGCCTGGTGTTTGAGTTCATGGAGCACGGCTGCCTGTCGGATTACCTTCGAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS GCA 72 bp | GCTGTCCAGCAGGTAGTACTCTTCATCACACCGCAGTaGGAGCTCCTGAGGGTCGTTGGTTTGGTAGTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVQQVVLFITPQ*ELLRVVGLVVV Trigger: TACGACTACCAAACCAACGACCCTCAGGAGCTCGCACTGCGGTGTGATGAAGAGTACTACCTGCTGGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS GCA 72 bp | GCTGCTATAGCGACTAAAGGAGAACACCTCTGGGGATaGCCACTTCACTGGGAATTTGGTGCCCGTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAIATKGEHLWG*PLHWEFGARGA Trigger: AGCTCCACGGGCACCAAATTCCCAGTGAAGTGGGCATCCCCAGAGGTGTTCTCCTTTAGTCGCTATAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | CCAGCTTCTGCGATTTCAGCCAGCTGGCTTAACAGCTaGGAGAAGGGTGGCCGGTCTTCTGGTTTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PASAISASWLNS*EKGGRSSGFSF Trigger: GAAAGAGAAACCAGAAGACCGGCCACCCTTCTCCCAGCTGTTAAGCCAGCTGGCTGAAATCGCAGAAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | CTGCCAATCTCCTGCACGAACGTTAGCTCTGAGGGTTaGATCACCCACTTCCCATATCTTAGCCCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPISCTNVSSEG*ITHFPYLSPAV Trigger: CACAGCAGGGCTAAGATATGGGAAGTGGGTGATCCAACCCTCAGAGCTAACGTTCGTGCAGGAGATTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CAA 72 bp | ATCACACCGCAGTGCGAGCTCCTGAGGGTCGTTGGTTaGGTAGTCGTACAAGGCAATGACCAGGGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITPQCELLRVVG*VVVQGNDQGFF Trigger: GAAGAAACCCTGGTCATTGCCTTGTACGACTACCAAACCAACGACCCTCAGGAGCTCGCACTGCGGTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CAA 90 bp | GTACTCTTCATCACACCGCAGTGCGAGCTCCTGAGGGTCGTTGGTTaGGTAGTCGTACAAGGCAATGACCAGGGTTTCTTCAGGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLFITPQCELLRVVG*VVVQGNDQGFFRFL Trigger: CAGGAACCTGAAGAAACCCTGGTCATTGCCTTGTACGACTACCAAACCAACGACCCTCAGGAGCTCGCACTGCGGTGTGATGAAGAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | CCTGAGGGTCGTTGGTTTGGTAGTCGTACAAGGCAATaGCCAGGGTTTCTTCAGGTTCCTGAAATGACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PEGRWFGSRTRQ*PGFLQVPEMTA Trigger: GGCGGTCATTTCAGGAACCTGAAGAAACCCTGGTCATTGCCTTGTACGACTACCAAACCAACGACCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | CTGCTTGGTGCATATCCTTCATGCCCATTTTTGTCTTaGACCCTCCACCAGTGGATCTCGGAGCTGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGAYPSCPFLS*TLHQWISELSS Trigger: GCTGGACAGCTCCGAGATCCACTGGTGGAGGGTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | AGGCCAGGCGGGGCTTGTATAACCGAAAGCCAGTGCTaGTATCTTCCACGACCTCGGAATTGCTTCGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPGGACITESQC*YLPRPRNCFGF Trigger: AAAACCGAAGCAATTCCGAGGTCGTGGAAGATATCAGCACTGGCTTTCGGTTATACAAGCCCCGCCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS GCA 72 bp | TTCCTCGTTTCTTCTTTAAGGGTCAGCACCCAGCGCTaGCGACTCTCACAGTCTGGAGCAAACACATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLVSSLRVSTQR*RLSQSGANTYR Trigger: CCTGTATGTGTTTGCTCCAGACTGTGAGAGTCGGCAGCGCTGGGTGCTGACCCTTAAAGAAGAAACGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | TGCTGTGACAGGGGCTTTTTGTCTCCAGGAGCAAACTaGATAGCGGAGTCGAGTGACCAAACCTCCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: CCDRGFLSPGAN*IAESSDQTSSI Trigger: AATGGAGGAGGTTTGGTCACTCGACTCCGCTATCCAGTTTGCTCCTGGAGACAAAAAGCCCCTGTCACAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | ACTAAAGGAGAACACCTCTGGGGATGCCCACTTCACTaGGAATTTGGTGCCCGTGGAGCTGGTATATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: TKGEHLWGCPLH*EFGARGAGILI Trigger: GATCAATATACCAGCTCCACGGGCACCAAATTCCCAGTGAAGTGGGCATCCCCAGAGGTGTTCTCCTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | TTTGTCTCCAGGAGCAAACTGGATAGCGGAGTCGAGTaGCCAAACCTCCTCCATTGTACTGGTGATACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FVSRSKLDSGVE*PNLLHCTGDTG Trigger: TCCAGTATCACCAGTACAATGGAGGAGGTTTGGTCACTCGACTCCGCTATCCAGTTTGCTCCTGGAGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | CTGTGTATGTCCCGGGTGTCCTGGAATCTCGGACCATaGAAGCTCCTTCTTTACCTGTGTCCAAAAGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LCMSRVSWNLGP*KLLLYLCPKEV Trigger: AACTTCTTTTGGACACAGGTAAAGAAGGAGCTTTCATGGTCCGAGATTCCAGGACACCCGGGACATACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CAA 72 bp | CGAAAGCCAGTGCTGATATCTTCCACGACCTCGGAATaGCTTCGGTTTTCGTATGGGATTTTGCCTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RKPVLISSTTSE*LRFSYGILPSL Trigger: CAGTGAAGGCAAAATCCCATACGAAAACCGAAGCAATTCCGAGGTCGTGGAAGATATCAGCACTGGCTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | ATGCCCACTTCACTGGGAATTTGGTGCCCGTGGAGCTaGTATATTGATCATCAAGGACAAATCTTGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: MPTSLGIWCPWS*YIDHQGQILSS Trigger: GGATGACAAGATTTGTCCTTGATGATCAATATACCAGCTCCACGGGCACCAAATTCCCAGTGAAGTGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CAA 72 bp | GGGATGCTAATGTCACTCTTGACAATCTCCACACACTaGATTCTGGAGAGTTCAATGGAGCCCTTCAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GMLMSLLTISTH*ILESSMEPFNV Trigger: CACGTTGAAGGGCTCCATTGAACTCTCCAGAATCAAGTGTGTGGAGATTGTCAAGAGTGACATTAGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CAA 90 bp | TTGTATAACCGAAAGCCAGTGCTGATATCTTCCACGACCTCGGAATaGCTTCGGTTTTCGTATGGGATTTTGCCTTCACTGAAGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYNRKPVLISSTTSE*LRFSYGILPSLKTS Trigger: GGAAGTCTTCAGTGAAGGCAAAATCCCATACGAAAACCGAAGCAATTCCGAGGTCGTGGAAGATATCAGCACTGGCTTTCGGTTATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CAA 72 bp | TCAAGGACAAATCTTGTCATCCCAAAGTCGGACACCTaGATGACCTGGTTTTCTCCCACCAAACAGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRTNLVIPKSDT*MTWFSPTKQFL Trigger: CAGAAACTGTTTGGTGGGAGAAAACCAGGTCATCAAGGTGTCCGACTTTGGGATGACAAGATTTGTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CAA 72 bp | CTTCACTGGGAATTTGGTGCCCGTGGAGCTGGTATATaGATCATCAAGGACAAATCTTGTCATCCCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHWEFGARGAGI*IIKDKSCHPKV Trigger: GACTTTGGGATGACAAGATTTGTCCTTGATGATCAATATACCAGCTCCACGGGCACCAAATTCCCAGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS TCA 72 bp | AATTGCTTCGGTTTTCGTATGGGATTTTGCCTTCACTaGAGACTTCCCACATCAGTACACCAAACGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: NCFGFRMGFCLH*RLPTSVHQTTT Trigger: TGTGGTCGTTTGGTGTACTGATGTGGGAAGTCTTCAGTGAAGGCAAAATCCCATACGAAAACCGAAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020664.13 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | ACTTTAAAATTCGAGGGAGAAGTCCTTCTCTTCTGTTaGGACTTCTTGATCAGCTGTTCTTCCAGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TLKFEGEVLLFC*DFLISCSSRRM Trigger: CATCCTCCTGGAAGAACAGCTGATCAAGAAGTCCCAACAGAAGAGAAGGACTTCTCCCTCGAATTTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CAA 90 bp | CATAGGTTTCAAGGTTATTTGGAGATTTTTCTACCAGGTAACTGCTaGGTGCATATCCTTCATGCCCATTTTTGTCTTGAACCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HRFQGYLEIFLPGNC*VHILHAHFCLEPST Trigger: GGTGGAGGGTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAAAATCTCCAAATAACCTTGAAACCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||
| CDS CCA 72 bp | AAGGTTATTTGGAGATTTTTCTACCAGGTAACTGCTTaGTGCATATCCTTCATGCCCATTTTTGTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KVIWRFFYQVTA*CISFMPIFVLN Trigger: GTTCAAGACAAAAATGGGCATGAAGGATATGCACCAAGCAGTTACCTGGTAGAAAAATCTCCAAATAACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020664.13 ENSMUST00000101306.4 ENSMUST00000109237.9 |
||