RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITIH5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025780

Ensembl transcript IDs: ENSMUST00000026886.8

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTATCCTATCATCGCTCTGAGTGCAACCCAGGAGAGCCAGCCACCTaGCTCCAGAGCTGTCTCTCCAGTTGGGATTTATGTAATAGCAAG +
Preference number: 1 (lower is better)
Translates to: LSYHRSECNPGEPAT*LQSCLSSWDLCNSK
Trigger: CTTGCTATTACATAAATCCCAACTGGAGAGACAGCTCTGGAGCCAGGTGGCTGGCTCTCCTGGGTTGCACTCAGAGCGATGATAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 90 bp AGACAATATCTAGAACAACACACTCGTATTATCCTATCATCGCTCTaGGTGCAACCCAGGAGAGCCAGCCACCTGGCTCCAGAGCTGTCT +
Preference number: 1 (lower is better)
Translates to: RQYLEQHTRIILSSL*VQPRRASHLAPELS
Trigger: AGACAGCTCTGGAGCCAGGTGGCTGGCTCTCCTGGGTTGCACTCAGAGCGATGATAGGATAATACGAGTGTGTTGTTCTAGATATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 90 bp CCATTGGCTGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTaGCTTTGGGGCCCAGAAGTGGTATCTCTATACTTCATCTTGCCA +
Preference number: 1 (lower is better)
Translates to: PLAAVSGFQISTSSG*LWGPEVVSLYFILP
Trigger: TGGCAAGATGAAGTATAGAGATACCACTTCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCAGCCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 90 bp CATGAACACTCTAAACCAGTGTGTAAGAGCTCTGTTCTCAGGACTTaGCCCCTTCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCA +
Preference number: 1 (lower is better)
Translates to: HEHSKPVCKSSVLRT*PLLKDSTWRDRYRA
Trigger: TGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGGTCAAGTCCTGAGAACAGAGCTCTTACACACTGGTTTAGAGTGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 90 bp ATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATGGAAAGGTGGAATaGGAGAAGATACAGCAACACATGGATGGATGGATAGGAGGTAGT +
Preference number: 1 (lower is better)
Translates to: IPSLQLEVVDHGKVE*EKIQQHMDGWIGGS
Trigger: ACTACCTCCTATCCATCCATCCATGTGTTGCTGTATCTTCTCCCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 90 bp CATCTTGCCAAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATaGAAAGGTGGAATGGGAGAAGATACAGCAACACATGGATGGATG +
Preference number: 1 (lower is better)
Translates to: HLAKHPQPPARSGRS*KGGMGEDTATHGWM
Trigger: CATCCATCCATGTGTTGCTGTATCTTCTCCCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGATGTTTGGCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 90 bp GCTCTTGAGGCTGCTGGGTCAGACAGGAACATGTGGATGTCATTGTaGTGCTCAAACACTTCCCACAGGAAGGAAAACAATTTTCTTGAT +
Preference number: 1 (lower is better)
Translates to: ALEAAGSDRNMWMSL*CSNTSHRKENNFLD
Trigger: ATCAAGAAAATTGTTTTCCTTCCTGTGGGAAGTGTTTGAGCAGCACAATGACATCCACATGTTCCTGTCTGACCCAGCAGCCTCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 90 bp GGGCAGTTTAACCAAAATGCACTTATTACTTACAGTTTCAGAGACTaGGATGATCTGGATCAAGGCACAGATCTGGTGTGTGGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: GQFNQNALITYSFRD*DDLDQGTDLVCGSW
Trigger: CCAGGAGCCACACACCAGATCTGTGCCTTGATCCAGATCATCTCAGTCTCTGAAACTGTAAGTAATAAGTGCATTTTGGTTAAACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 90 bp TATTGGAATAAATTGGAAAACACCCACCAGCAAGGCCAAGTGACCTaGAAAGGCAATCAGGACAAGATCAGTATCTGGGATATTGACTGG +
Preference number: 1 (lower is better)
Translates to: YWNKLENTHQQGQVT*KGNQDKISIWDIDW
Trigger: CCAGTCAATATCCCAGATACTGATCTTGTCCTGATTGCCTTTGCAGGTCACTTGGCCTTGCTGGTGGGTGTTTTCCAATTTATTCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 90 bp ACCAAAATGCACTTATTACTTACAGTTTCAGAGACTGAGATGATCTaGATCAAGGCACAGATCTGGTGTGTGGCTCCTGGCTTCTACACA +
Preference number: 1 (lower is better)
Translates to: TKMHLLLTVSETEMI*IKAQIWCVAPGFYT
Trigger: TGTGTAGAAGCCAGGAGCCACACACCAGATCTGTGCCTTGATCCAGATCATCTCAGTCTCTGAAACTGTAAGTAATAAGTGCATTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 90 bp TGGTTTATTGGAATAAATTGGAAAACACCCACCAGCAAGGCCAAGTaGCCTGCAAAGGCAATCAGGACAAGATCAGTATCTGGGATATTG +
Preference number: 1 (lower is better)
Translates to: WFIGINWKTPTSKAK*PAKAIRTRSVSGIL
Trigger: CAATATCCCAGATACTGATCTTGTCCTGATTGCCTTTGCAGGTCACTTGGCCTTGCTGGTGGGTGTTTTCCAATTTATTCCAATAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 90 bp CACGTCCTTAGGCTTGTAGGACTCTTTCAGATCTTACAACAGCATTaGTTTTGTATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCAT +
Preference number: 1 (lower is better)
Translates to: HVLRLVGLFQILQQH*FCIFWVARIKVETH
Trigger: ATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATACAAAAGCAATGCTGTTGTAAGATCTGAAAGAGTCCTACAAGCCTAAGGACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 90 bp GTAGGACTCTTTCAGATCTTACAACAGCATTGCTTTTGTATATTCTaGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTC +
Preference number: 1 (lower is better)
Translates to: VGLFQILQQHCFCIF*VARIKVETHVVETL
Trigger: GAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATACAAAAGCAATGCTGTTGTAAGATCTGAAAGAGTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 90 bp CCCTTGGTTTATTCATTCACAAACTCATGCATATCTCTAATGTACTaGATCGCACCCCCTCCATTTTCCATGATATTCTCTTATGGTTTC +
Preference number: 1 (lower is better)
Translates to: PLVYSFTNSCISLMY*IAPPPFSMIFSYGF
Trigger: GAAACCATAAGAGAATATCATGGAAAATGGAGGGGGTGCGATCCAGTACATTAGAGATATGCATGAGTTTGTGAATGAATAAACCAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 90 bp GTGTTTCTTTATAAGTATGTGACTCTGCATTCAATTAGAATTGCTTaGTATAAATTGGGGGTTATTTCTTTGAGCAAGGGCAACTTAGCA +
Preference number: 1 (lower is better)
Translates to: VFLYKYVTLHSIRIA*YKLGVISLSKGNLA
Trigger: TGCTAAGTTGCCCTTGCTCAAAGAAATAACCCCCAATTTATAGCAAGCAATTCTAATTGAATGCAGAGTCACATACTTATAAAGAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTAAGGTCCCAGGGACATaGCCTGGGGCCGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: MSTCSCTCGGQKITLVSIKVPGT*PGAGPG
Trigger: ACCAGGGCCGGCCCCAGGGCATGTCCCTGGGACCTT...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTACCGCTGCTAGCCCATaGTGCAGCAGCCCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: PRSGISILHLAKHPQPPATAASP*CSSPVC
Trigger: GCACACAGGGCTGCTGCACCATGGGCTAGCAGCGGT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATGCTGCTAGCCCATGGTaGAGCAGCCCTGTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDAASPW*SSPVCR
Trigger: CCTGCACACAGGGCTGCTGCACCATGGGCTAGCAGC...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATGGAGAGCCAGCCACCTaGCTCCAGAGCTGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDGEPAT*LQSCLS
Trigger: GGAGAGACAGCTCTGGAGCCAGGTGGCTGGCTCTCC...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 90 bp CCTGAAAAGATGGAAACATCTGGCAGCCATAAGGGTTGCTCATCTTaGCACTCCTGGCCTGAGAACGGACAGATGAGTCTGGGAACATGG +
Preference number: 2 (lower is better)
Translates to: PEKMETSGSHKGCSS*HSWPENGQMSLGTW
Trigger: CCATGTTCCCAGACTCATCTGTCCGTTCTCAGGCCAGGAGTGCAAAGATGAGCAACCCTTATGGCTGCCAGATGTTTCCATCTTTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTTCTGGAGAAGGCAGCTaGAAAGAGATCTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSASGEGS*KEIFLP
Trigger: AGGAAGGAAGATCTCTTTTCAGCTGCCTTCTCCAGA...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGACAGTATCTGGGATATTaGCTGGGCAAGTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRQYLGY*LGKFPQ
Trigger: CTGTGGAAACTTGCCCAGTCAATATCCCAGATACTG...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTGGGTCCACTTCCCTCTaGGAATGTACAGTTGATTCT +
Preference number: 2 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAGSTSL*ECTVDS
Trigger: AGAATCAACTGTACATTCTCAGAGGGAAGTGGACCC...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp CCCCTTCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTATCTCCCCATCCTGGATaGGTCCTGTCTTCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: PLLKDSTWRDRYRADLGLSPHPG*VLSSSA
Trigger: AGCTGAAGAAGACAGGACCCATCCAGGATGGGGAGA...TAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTAGGAAGGGAAGTATTTaGATTTCAGCTTCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSARKGSI*ISASCP
Trigger: AGGGCAGGAAGCTGAAATGCAAATACTTCCCTTCCT...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp TCAGCTGCCTCTGTTTCCCCATTTGAAATGACAGTCCTCTTCTTTGCAGGTATTCACTCAAGCCCCAACTaGCTCTTGAGGCTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SAASVSPFEMTVLFFAGIHSSPN*LLRLLG
Trigger: ACCCAGCAGCCTCAAGAGCCAGTTGGGGCTTGAGTG...AATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 90 bp GGCTGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTaGGGGCCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACAT +
Preference number: 2 (lower is better)
Translates to: GCSLWFPDFHILRVT*GPRSGISILHLAKH
Trigger: ATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGATTTCCCCATTTGAAATaGCAGTCCTCTTCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRFPHLK*QSSSLQ
Trigger: CTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAA...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTAGATCCGTGTTCTGCTaGATCTATCACCCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: PRSGISILHLAKHPQPPARSVFC*IYHPCS
Trigger: AGAGCAAGGGTGATAGATGCAGCAGAACACGGATCT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp AGAATGCCAGGTCTAACATGTGAATCCTTCAGGTTCAACTGTACTCCTGCTCTATATCATCGCTCTGAGTaGAACCCAGGAGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: RMPGLTCESFRFNCTPALYHRSE*NPGEPA
Trigger: GGCTGGCTCTCCTGGGTTGCACTCAGAGCGATGATA...TAGAGCAGGAGTACAGTTGAACCTGAAGGATTCACATGTTAGACCTGGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp CTCATGATCCCTCTCCCCATCCTGGATGGGTCCTGTCTTCTTCAGCTAACCGCTAGAAAACAAATGTCATaGCAACCCCTCTTCCTCATA +
Preference number: 2 (lower is better)
Translates to: LMIPLPILDGSCLLQLTARKQMS*QPLFLI
Trigger: TATGAGGAAGAGGGGTTGCCATGACATTTGTTTTCT...AGCGGTTAGCTGAAGAAGACAGGACCCATCCAGGATGGGGAGAGGGATCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTGTTGGGAGCACCATCTaGAGAAGGCAGCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: MSTCSCTCGGQKITLVSIVGSTI*RRQLKR
Trigger: TCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAAC...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTTCCCTCTCCCCATCCTaGATGGGTCCTGTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLSLSPS*MGPVFF
Trigger: GAAGAAGACAGGACCCATCCAGGATGGGGAGAGGGA...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTACTGAGAACGGACAGATaGGTCTGGGAACATGGGGAG +
Preference number: 2 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLLRTDR*VWEHGE
Trigger: CTCCCCATGTTCCCAGACTCATCTGTCCGTTCTCAG...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTTCAGAATCAGAGATCTaGCTGTCTCTGCCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: MSTCSCTCGGQKITLVSISESEI*LSLPPE
Trigger: TTCAGGAGGCAGAGACAGGCAGATCTCTGATTCTGA...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATaGAAAGGTGGAATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PRSGISILHLAKHPQPPARSGRS*KGGMGE
Trigger: TTCTCCCATTCCACCTTTCCATGATCTACCACTTCT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 90 bp CATTGTGCTGCTCAAACACTTCCCACAGGAAGGAAAACAATTTTCTaGATGCTGCTTTCTCTCCAAGTGCTAAGTGGCCTTCCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: HCAAQTLPTGRKTIF*MLLSLQVLSGLPVS
Trigger: TGAGACAGGAAGGCCACTTAGCACTTGGAGAGAAAGCAGCATCAAGAAAATTGTTTTCCTTCCTGTGGGAAGTGTTTGAGCAGCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp GAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAACCGCTCACTCTAGGCTaGATCTGTCTGTCATGCACT +
Preference number: 2 (lower is better)
Translates to: EMWESLLRVSFPWFIHSQPLTLG*ICLSCT
Trigger: AGTGCATGACAGACAGATGCAGCCTAGAGTGAGCGG...TTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp CCAAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATGGAAAGGTGGAATGGGACAGTCCTCTTCTTTaGAGGTATTGGAATTTTCTA +
Preference number: 2 (lower is better)
Translates to: PNIPSLQLEVVDHGKVEWDSPLL*RYWNFL
Trigger: TAGAAAATTCCAATACCTGCAAAGAAGAGGACTGTC...CCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGATGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTTTTATTGGAATAAATTaGAAAACACCCACCAGCAAG +
Preference number: 2 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAFIGIN*KTPTSK
Trigger: CTTGCTGGTGGGTGTTTTCCAATTTATTCCAATAAA...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATCTCTGTTTCCCCATTTaGAATGACAGTCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDLCFPI*NDSPLL
Trigger: AAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAG...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTACAAGGCCAAGTGACCTaGAAAGGCAATCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLQGQVT*KGNQDK
Trigger: CTTGTCCTGATTGCCTTTGCAGGTCACTTGGCCTTG...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTATGCTTCCCCCATGCATaGTTTTCCCTTTCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLCFPHA*FSLSLF
Trigger: GAACAGAGAAAGGGAAAACCATGCATGGGGGAAGCA...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTGTGTTCATGCACATGTaGAGGCCAGAAGATAACCTT +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLVFMHM*RPEDNL
Trigger: AAGGTTATCTTCTGGCCTCCACATGTGCATGAACAC...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 90 bp AGAAACACACACACACACACACACACACACACACACACACACACTTaGGATTTTCAGAAACAGGTTCTCAGCATAGTTCTCCCTACATAT +
Preference number: 2 (lower is better)
Translates to: RNTHTHTHTHTHTHT*DFQKQVLSIVLPTY
Trigger: ATATGTAGGGAGAACTATGCTGAGAACCTGTTTCTGAAAATCCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTCTAAGCCTGAAAAGATaGAAACATCTGGCAGCCATA +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLLSLKR*KHLAAI
Trigger: TATGGCTGCCAGATGTTTCCATCTTTTCAGGCTTAG...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTATTCCTTCCTAAGCATTaGGATAGGGCAAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLFLPKH*DRAKSR
Trigger: TCTGCTTTTTGCCCTATCTCAATGCTTAGGAAGGAA...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR TCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTACCAACCAGCCTCCCTaGTTATTATTAACTAAACAT +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLTNQPP*LLLTKH
Trigger: ATGTTTAGTTAATAATAATCAGGGAGGCTGGTTGGT...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTTTGTCTGTGAGAACATaGAGTTCAGGTTATAACACA +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLLSVRT*SSGYNT
Trigger: TGTGTTATAACCTGAACTGCATGTTCTCACAGACAA...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR GCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTTCAGTTTCTTGTGCTTaGAAGAGAATGCTTTACCAA +
Preference number: 2 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLSVSCA*KRMLYQ
Trigger: TTGGTAAAGCATTCTCTTGCAAGCACAAGAAACTGA...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CCA 90 bp AGAATGCCAGGTCTAACATGTGAATCCTTCAGGTTCAACTGTACTCCTGCTCTACTTCTTTGCAGGTATTaGAATTTTCTATCTACAACG +
Preference number: 2 (lower is better)
Translates to: RMPGLTCESFRFNCTPALLLCRY*NFLSTT
Trigger: CGTTGTAGATAGAAAATTCCAATACCTGCAAAGAAG...TAGAGCAGGAGTACAGTTGAACCTGAAGGATTCACATGTTAGACCTGGCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 90 bp TATAAGTATGTGACTCTGCATTCAATTAGAATTGCTTGCTATAAATaGGGGGTTATTTCTTTGAGCAAGGGCAACTTAGCAGTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: YKYVTLHSIRIACYK*GVISLSKGNLAVAL
Trigger: CAAAGCCACTGCTAAGTTGCCCTTGCTCAAAGAAATAACCCCCAATTTATAGCAAGCAATTCTAATTGAATGCAGAGTCACATACTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp GGGTCCTGTCTTCTTCAGCTAACCGCTGCTAGCCCATaGTGCAGCAGCCCTGTGTGCAGGCATGGGTCCACT +
Preference number: 3 (lower is better)
Translates to: GSCLLQLTAASP*CSSPVCRHGST
Trigger: AGTGGACCCATGCCTGCACACAGGGCTGCTGCACCATGGGCTAGCAGCGGTTAGCTGAAGAAGACAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp CAGCTTCCTGCCCTGACTCATTGCTCTAAGAGACATTaGACCTCCAGCTCACCAGGGGGCGGGCTACACAGT +
Preference number: 3 (lower is better)
Translates to: QLPALTHCSKRH*TSSSPGGGLHS
Trigger: ACTGTGTAGCCCGCCCCCTGGTGAGCTGGAGGTCCAATGTCTCTTAGAGCAATGAGTCAGGGCAGGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp GTTTCCCAGCAGGCCACTCCCACACCAGCCCCAACATaGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATC +
Preference number: 3 (lower is better)
Translates to: VSQQATPTPAPT*RRRTQGVRREI
Trigger: GATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGTTGGGGCTGGTGTGGGAGTGGCCTGCTGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp GCGCCAGGGATCAGCCTGCCTCAGCCTCCTCAGTACTaGGAATGGAAAGCGCATCACCCACACCTGACTTTT +
Preference number: 3 (lower is better)
Translates to: APGISLPQPPQY*EWKAHHPHLTF
Trigger: AAAAGTCAGGTGTGGGTGATGCGCTTTCCATTCCCAGTACTGAGGAGGCTGAGGCAGGCTGATCCCTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp CATCGCTCTGAGTGCAACCCAGGAGAGCCAGCCACCTaGCTCCAGAGCTGTCTCTCCAGTTGGGATTTATGT +
Preference number: 3 (lower is better)
Translates to: HRSECNPGEPAT*LQSCLSSWDLC
Trigger: ACATAAATCCCAACTGGAGAGACAGCTCTGGAGCCAGGTGGCTGGCTCTCCTGGGTTGCACTCAGAGCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp AACAGAAAGAGACCCACTCAAGCCCCAACTGGCTCTTaGGGCTGCTGGGTCAGACAGGAACATGTGGATGTC +
Preference number: 3 (lower is better)
Translates to: NRKRPTQAPTGS*GCWVRQEHVDV
Trigger: GACATCCACATGTTCCTGTCTGACCCAGCAGCCTCAAGAGCCAGTTGGGGCTTGAGTGGGTCTCTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp AACAACACACTCGTATTATCCTATCATCGCTCTGAGTaGAACCCAGGAGAGCCAGCCACCTGGCTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: NNTLVLSYHRSE*NPGEPATWLQS
Trigger: GCTCTGGAGCCAGGTGGCTGGCTCTCCTGGGTTGCACTCAGAGCGATGATAGGATAATACGAGTGTGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TATCATGGCGTGGTGCCTGATGGGAGAAATCTTATGTaGGGACACGTAGAGGCCTTCACTCTGGTGGTCCAC +
Preference number: 3 (lower is better)
Translates to: YHGVVPDGRNLM*GHVEAFTLVVH
Trigger: GTGGACCACCAGAGTGAAGGCCTCTACGTGTCCCCACATAAGATTTCTCCCATCAGGCACCACGCCATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp CTGGCTCTTGAGGCTGCTGGGTCAGACAGGAACATGTaGATGTCATTGTGCTGCTCAAACACTTCCCACAGG +
Preference number: 3 (lower is better)
Translates to: LALEAAGSDRNM*MSLCCSNTSHR
Trigger: CCTGTGGGAAGTGTTTGAGCAGCACAATGACATCCACATGTTCCTGTCTGACCCAGCAGCCTCAAGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp CTAGAACAACACACTCGTATTATCCTATCATCGCTCTaGGTGCAACCCAGGAGAGCCAGCCACCTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: LEQHTRIILSSL*VQPRRASHLAP
Trigger: TGGAGCCAGGTGGCTGGCTCTCCTGGGTTGCACTCAGAGCGATGATAGGATAATACGAGTGTGTTGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATCCTAGCTCGTGCTCATaGGAGATGTGGGAATCTCTC +
Preference number: 3 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHPSSCS*EMWESL
Trigger: GAGAGATTCCCACATCTCCAATGAGCACGAGCTAGG...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp CTTCCCTCTGAGAATGTACAGTTGATTCTTCCCACCCATAGGCTGAGCCGCTCACAGGAAGGGAAGTATTaGCATTTCAGCTTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LPSENVQLILPTHRLSRSQEGKY*HFSFLP
Trigger: GGGCAGGAAGCTGAAATGCAAATACTTCCCTTCCTG...TGAGCGGCTCAGCCTATGGGTGGGAAGAATCAACTGTACATTCTCAGAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGACTATCACCCTTGCTCTaGAATAGGATGGCTAGGCTA +
Preference number: 3 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRLSPLL*NRMARL
Trigger: TAGCCTAGCCATCCTATTCAAGAGCAAGGGTGATAG...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp TGTGTAAGAGCTCTGTTCTCAGGACTTGACCCCTTCTaGAAGACTCCACTTGGAGGGACCGTTACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: CVRALFSGLDPF*KTPLGGTVTEQ
Trigger: CTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGGTCAAGTCCTGAGAACAGAGCTCTTACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TGGCCTTCCTGTCTCACTGTAGAGAATATCATGGCGTaGTGCCTGATGGGAGAAATCTTATGTGGGGACACG +
Preference number: 3 (lower is better)
Translates to: WPSCLTVENIMA*CLMGEILCGDT
Trigger: CGTGTCCCCACATAAGATTTCTCCCATCAGGCACCACGCCATGATATTCTCTACAGTGAGACAGGAAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TTCATAGAACAGAAAGAGACCCACTCAAGCCCCAACTaGCTCTTGAGGCTGCTGGGTCAGACAGGAACATGT +
Preference number: 3 (lower is better)
Translates to: FIEQKETHSSPN*LLRLLGQTGTC
Trigger: ACATGTTCCTGTCTGACCCAGCAGCCTCAAGAGCCAGTTGGGGCTTGAGTGGGTCTCTTTCTGTTCTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TCAGAGACTGAGATGATCTGGATCAAGGCACAGATCTaGTGTGTGGCTCCTGGCTTCTACACAGCCACCTTT +
Preference number: 3 (lower is better)
Translates to: SETEMIWIKAQI*CVAPGFYTATF
Trigger: AAAGGTGGCTGTGTAGAAGCCAGGAGCCACACACCAGATCTGTGCCTTGATCCAGATCATCTCAGTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp GAAGTATTTGCATTTCAGCTTCCTGCCCTGACTCATTaGTCTAAGAGACATTGGACCTCCAGCTCACCAGGG +
Preference number: 3 (lower is better)
Translates to: EVFAFQLPALTH*SKRHWTSSSPG
Trigger: CCCTGGTGAGCTGGAGGTCCAATGTCTCTTAGAGCAATGAGTCAGGGCAGGAAGCTGAAATGCAAATACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TCTGGCCTCAATGTAAATGACCTTGGAAGGAGTGGTTaGGAGCACCATCTGGAGAAGGCAGCTGAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: SGLNVNDLGRSG*EHHLEKAAEKR
Trigger: TCTCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAACCACTCCTTCCAAGGTCATTTACATTGAGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TCACGCCAGTCTCCTAGCTCGTGCTCATTGGAGATGTaGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: SRQSPSSCSLEM*ESLLRVSFPWF
Trigger: AAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTCCAATGAGCACGAGCTAGGAGACTGGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATAAGGGTTGCTCATCTTaGCACTCCTGGCCTGAGAAC +
Preference number: 3 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDKGCSS*HSWPEN
Trigger: GTTCTCAGGCCAGGAGTGCAAAGATGAGCAACCCTT...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp ACTAAAACTCACGCCAGTCTCCTAGCTCGTGCTCATTaGAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: TKTHASLLARAH*RCGNLSSEFLS
Trigger: GGAAAGAAACTCTGAGGAGAGATTCCCACATCTCCAATGAGCACGAGCTAGGAGACTGGCGTGAGTTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TTCTATTCCTTTCTTCATTGGGGGAGGGGGTGGTACTaGAAGCCAAAGCCACAATTCTGCTCAACAACTCAG +
Preference number: 3 (lower is better)
Translates to: FYSFLHWGRGWY*KPKPQFCSTTQ
Trigger: CTGAGTTGTTGAGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGGAATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TTTCCACATCCTCAGGGTGACTTTGGGGCCCAGAAGTaGTATCTCTATACTTCATCTTGCCAAACATCCCCA +
Preference number: 3 (lower is better)
Translates to: FPHPQGDFGAQK*YLYTSSCQTSP
Trigger: TGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTATCCTCAGGGTGACTTaGGGGCCCAGAAGTGGTATC +
Preference number: 3 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLILRVT*GPRSGI
Trigger: GATACCACTTCTGGGCCCCAAAGTCACCCTGAGGAT...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp CTAGGCTGCATCTGTCTGTCATGCACTGTTCTCATCTaGTTTATTAGTTCCTGGGCCCCCAAAGGCAAAAAC +
Preference number: 3 (lower is better)
Translates to: LGCICLSCTVLI*FISSWAPKGKN
Trigger: GTTTTTGCCTTTGGGGGCCCAGGAACTAATAAATCAGATGAGAACAGTGCATGACAGACAGATGCAGCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp TGGGGAAAGTGGCTCAGCTGCCTCTGTTTCCCCATTTaGAATGACAGTCCTCTTCTTTGCAGGTATTGGAAT +
Preference number: 3 (lower is better)
Translates to: WGKWLSCLCFPI*NDSPLLCRYWN
Trigger: ATTCCAATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGAGCCACTTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp AAATTGGAAAACACCCACCAGCAAGGCCAAGTGACCTaGAAAGGCAATCAGGACAAGATCAGTATCTGGGAT +
Preference number: 3 (lower is better)
Translates to: KLENTHQQGQVT*KGNQDKISIWD
Trigger: ATCCCAGATACTGATCTTGTCCTGATTGCCTTTGCAGGTCACTTGGCCTTGCTGGTGGGTGTTTTCCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp CTGGCTGAGGTCCTCCTTTTTCTAAGCCTGAAAAGATaGAAACATCTGGCAGCCATAAGGGTTGCTCATCTT +
Preference number: 3 (lower is better)
Translates to: LAEVLLFLSLKR*KHLAAIRVAHL
Trigger: AAGATGAGCAACCCTTATGGCTGCCAGATGTTTCCATCTTTTCAGGCTTAGAAAAAGGAGGACCTCAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp AAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATaGAAAGGTGGAATGGGAGAAGATACAGCAACACAT +
Preference number: 3 (lower is better)
Translates to: KHPQPPARSGRS*KGGMGEDTATH
Trigger: ATGTGTTGCTGTATCTTCTCCCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp CACTTATTACTTACAGTTTCAGAGACTGAGATGATCTaGATCAAGGCACAGATCTGGTGTGTGGCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: HLLLTVSETEMI*IKAQIWCVAPG
Trigger: GCCAGGAGCCACACACCAGATCTGTGCCTTGATCCAGATCATCTCAGTCTCTGAAACTGTAAGTAATAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp AGAATGCCAGGTCTAACATGTGAATCCTTCAGGTTCAACTGTACTCCTGCTCTAAACTTAGCAGTGGCTTaGCAACTGAGGGATATGACC +
Preference number: 3 (lower is better)
Translates to: RMPGLTCESFRFNCTPALNLAVA*QLRDMT
Trigger: GGTCATATCCCTCAGTTGCAAAGCCACTGCTAAGTT...TAGAGCAGGAGTACAGTTGAACCTGAAGGATTCACATGTTAGACCTGGCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp GGAATAAATTGGAAAACACCCACCAGCAAGGCCAAGTaGCCTGCAAAGGCAATCAGGACAAGATCAGTATCT +
Preference number: 3 (lower is better)
Translates to: GINWKTPTSKAK*PAKAIRTRSVS
Trigger: AGATACTGATCTTGTCCTGATTGCCTTTGCAGGTCACTTGGCCTTGCTGGTGGGTGTTTTCCAATTTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp TTTGAGTTCTGGTGGCTCAACTCAGTTTCTTGTGCTTaGAAGAGAATGCTTTACCAACCAGCCTCCCTGATT +
Preference number: 3 (lower is better)
Translates to: FEFWWLNSVSCA*KRMLYQPASLI
Trigger: AATCAGGGAGGCTGGTTGGTAAAGCATTCTCTTGCAAGCACAAGAAACTGAGTTGAGCCACCAGAACTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTATTGCTTGCTATAAATaGGGGGTTATTTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: PRSGISILHLAKHPQPPAIACYK*GVISLS
Trigger: GCTCAAAGAAATAACCCCCAATTTATAGCAAGCAAT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTTGCATTCAATTAGAATaGCTTGCTATAAATTGGGGG +
Preference number: 3 (lower is better)
Translates to: PRSGISILHLAKHPQPPACIQLE*LAINWG
Trigger: CCCCCAATTTATAGCAAGCAATTCTAATTGAATGCA...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp AATTTTCTTGATGCTGCTTTCTCTCCAAGTGCTAAGTaGCCTTCCTGTCTCACTGTAGAGAATATCATGGCG +
Preference number: 3 (lower is better)
Translates to: NFLDAAFSPSAK*PSCLTVENIMA
Trigger: CGCCATGATATTCTCTACAGTGAGACAGGAAGGCCACTTAGCACTTGGAGAGAAAGCAGCATCAAGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp AAAGTGGCTCAGCTGCCTCTGTTTCCCCATTTGAAATaGCAGTCCTCTTCTTTGCAGGTATTGGAATTTTCT +
Preference number: 3 (lower is better)
Translates to: KVAQLPLFPHLK*QSSSLQVLEFS
Trigger: AGAAAATTCCAATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGAGCCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp GTGGAATGGGAGAAGATACAGCAACACATGGATGGATaGATAGGAGGTAGTGAGATCACTGTATATGAAACT +
Preference number: 3 (lower is better)
Translates to: VEWEKIQQHMDG*IGGSEITVYET
Trigger: AGTTTCATATACAGTGATCTCACTACCTCCTATCCATCCATCCATGTGTTGCTGTATCTTCTCCCATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp AGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATaGATATCTCTAATGTACTGGATCGCACCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: SFFPLVYSFTNS*ISLMYWIAPPP
Trigger: TGGAGGGGGTGCGATCCAGTACATTAGAGATATGCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTCAGAGTTTCTTTCCCTaGGTTTATTCATTCACAAAC +
Preference number: 3 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLQSFFP*VYSFTN
Trigger: GTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTG...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp AACCAAAATGCACTTATTACTTACAGTTTCAGAGACTaGGATGATCTGGATCAAGGCACAGATCTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: NQNALITYSFRD*DDLDQGTDLVC
Trigger: ACACACCAGATCTGTGCCTTGATCCAGATCATCTCAGTCTCTGAAACTGTAAGTAATAAGTGCATTTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR-3UTR CAA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCGTTTATTGGAATAAATaGGAAAACACCCACCAGCAA +
Preference number: 3 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCVYWNK*ENTHQQ
Trigger: TTGCTGGTGGGTGTTTTCCAATTTATTCCAATAAAC...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp TCAAAGAACCCTGTTCTTAATTTGTCTGTGAGAACATaGAGTTCAGGTTATAACACACACAAAGACAGACAG +
Preference number: 3 (lower is better)
Translates to: SKNPVLNLSVRT*SSGYNTHKDRQ
Trigger: CTGTCTGTCTTTGTGTGTGTTATAACCTGAACTGCATGTTCTCACAGACAAATTAAGAACAGGGTTCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TATTCATTCACAAACTCATGCATATCTCTAATGTACTaGATCGCACCCCCTCCATTTTCCATGATATTCTCT +
Preference number: 3 (lower is better)
Translates to: YSFTNSCISLMY*IAPPPFSMIFS
Trigger: AGAGAATATCATGGAAAATGGAGGGGGTGCGATCCAGTACATTAGAGATATGCATGAGTTTGTGAATGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CCA 72 bp TTTCAGATCTTACAACAGCATTGCTTTTGTATATTCTaGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTG +
Preference number: 3 (lower is better)
Translates to: FQILQQHCFCIF*VARIKVETHVV
Trigger: CACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATACAAAAGCAATGCTGTTGTAAGATCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp TGCAGACATTTCTACAAACAAGCATTGCGGTTAGAATaGTCAAGTTTTATTTTCAGTAGCCCTGATTTCAGT +
Preference number: 3 (lower is better)
Translates to: CRHFYKQALRLE*SSFIFSSPDFS
Trigger: ACTGAAATCAGGGCTACTGAAAATAAAACTTGATCATTCTAACCGCAATGCTTGTTTGTAGAAATGTCTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR GCA 72 bp TATAAGTATGTGACTCTGCATTCAATTAGAATTGCTTaGTATAAATTGGGGGTTATTTCTTTGAGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: YKYVTLHSIRIA*YKLGVISLSKG
Trigger: GCCCTTGCTCAAAGAAATAACCCCCAATTTATAGCAAGCAATTCTAATTGAATGCAGAGTCACATACTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR TCA 72 bp CCACATGCCCTATCTTCGTGTTTCTTTATAAGTATGTaGCTCTGCATTCAATTAGAATTGCTTGCTATAAAT +
Preference number: 3 (lower is better)
Translates to: PHALSSCFFISM*LCIQLELLAIN
Trigger: ATTTATAGCAAGCAATTCTAATTGAATGCAGAGTCACATACTTATAAAGAAACACGAAGATAGGGCATGTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CTCATGATCCCTCTCCCCATCCTGGATGGGTCCTGTCTTCTTCAGCTAACCGCTTGCAACAGCCTGAGCTaGCTGGGGACCCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LMIPLPILDGSCLLQLTACNSLS*LGTLST
Trigger: CGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTTGCA...AGCGGTTAGCTGAAGAAGACAGGACCCATCCAGGATGGGGAGAGGGATCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGACTCCCCACCAGCTGCTaGGGGCGCACGCTGATGCTA +
Preference number: 4 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRLPTSC*GRTLML
Trigger: TAGCATCAGCGTGCGCCCCCAGCAGCTGGTGGGGAG...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTGCCTCCCTGGTCTGCTaGAGTTTCGCTCCCACCATG +
Preference number: 4 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAASLVC*SFAPTM
Trigger: CATGGTGGGAGCGAAACTCCAGCAGACCAGGGAGGC...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATCCTGAAGGGCCCCATTaGTGTCTGTGCCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHPEGPH*CLCLQW
Trigger: CCACTGGAGGCACAGACATCAATGGGGCCCTTCAGG...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp CTCATGATCCCTCTCCCCATCCTGGATGGGTCCTGTCTTCTTCAGCTAACCGCTTGGCTGAGCCAGGTGTaGCTGAGACATCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: LMIPLPILDGSCLLQLTAWLSQV*LRHHSP
Trigger: TGGGGAATGATGTCTCAGTCACACCTGGCTCAGCCA...AGCGGTTAGCTGAAGAAGACAGGACCCATCCAGGATGGGGAGAGGGATCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCAAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATGGAAAGGTGGAATGGAGAGCCTCCCTGGTCTaGTGGAGTTTCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PNIPSLQLEVVDHGKVEWRASLV*WSFAPT
Trigger: GGTGGGAGCGAAACTCCAGCAGACCAGGGAGGCTCT...CCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGATGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGACCTACTACCACGCTCTaGTTGCAGGGGAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRPTTTL*LQGSTS
Trigger: GCTGGTACTCCCCTGCAACCAGAGCGTGGTAGTAGG...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp GCAGGCATGGGTCCACTTCCCTCTGAGAATGTACAGTaGATTCTTCCCACCCATAGGCTGAGCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: AGMGPLPSENVQ*ILPTHRLSRSL
Trigger: GAGTGAGCGGCTCAGCCTATGGGTGGGAAGAATCAACTGTACATTCTCAGAGGGAAGTGGACCCATGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp AGAATGCCAGGTCTAACATGTGAATCCTTCAGGTTCAACTGTACTCCTGCTCTAAGCCTCCCCACCAGCTaGTGGGGGCGCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: RMPGLTCESFRFNCTPALSLPTS*WGRTLM
Trigger: CATCAGCGTGCGCCCCCAGCAGCTGGTGGGGAGGCT...TAGAGCAGGAGTACAGTTGAACCTGAAGGATTCACATGTTAGACCTGGCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCCCTTCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTACCTCCAGCTGGTTTGTaGGGAGCCCTGGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLLKDSTWRDRYRADLGLPPAGL*GALASS
Trigger: TGAGGAAGCCAGGGCTCCGCACAAACCAGCTGGAGG...TAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp GGTTGGGAGCACCATCTGGAGAAGGCAGCTGAAAAGAGATCTTCCTTCCTAAGCGCAGCTCCTTCACAGTaGGGTAGCTCCAAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: GWEHHLEKAAEKRSSFLSAAPSQ*GSSKVA
Trigger: AGCGACTTTGGAGCTACCTCACTGTGAAGGAGCTGC...GCTTAGGAAGGAAGATCTCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCCCTTCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTACAGGTTCTGGCTGCTTaGCGGCCTCTCGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PLLKDSTWRDRYRADLGLQVLAA*RPLEGS
Trigger: AGAACCTTCGAGAGGCCGGCAAGCAGCCAGAACCTG...TAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp GCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATCTATCTTCAAGGCTAAGTCCTaGGCCTTCTGCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AEKNTGCKKGDPCSAASIFKAKS*AFCLSC
Trigger: GCAGCTGAGGCAGAAGGCCCAGGACTTAGCCTTGAA...GATAGATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTTACTGTTGCTGGCAGTaGCCTCCACATGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAYCCWQ*PPHAVD
Trigger: ATCAACTGCATGTGGAGGTCACTGCCAGCAACAGTA...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTTCTGGAATCTGCATCTaGAACTCAGCCTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSASGICI*NSASWS
Trigger: AGACCAGGAGGCTGAGTTCCAGATGCAGATTCCAGA...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTGTTTGTGCGGAGCCCTaGCTTCCTCAGCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: PRSGISILHLAKHPQPPAVCAEP*LPQLHG
Trigger: TCCATGAAGCTGAGGAAGCCAGGGCTCCGCACAAAC...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATAGAGACCTCTGCTGTTaGCGATGTAGAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHRDLCC*RCRSPG
Trigger: ACCTGGGCTTCTACATCGCCAACAGCAGAGGTCTCT...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGAGCCCGAGGAAATGGCTaGTTACTAAGATTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRARGNG*LLRFLP
Trigger: CGGCAAGAATCTTAGTAACCAGCCATTTCCTCGGGC...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp TCAGCTGCCTCTGTTTCCCCATTTGAAATGACAGTCCTCTTCTTTGCAGGTATTGTGCGCTGTTTCTTGTaGCCATTCGGAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SAASVSPFEMTVLFFAGIVRCFL*PFGGAG
Trigger: CCCCGCACCTCCGAATGGTCACAAGAAACAGCGCAC...AATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp GGTTGGGAGCACCATCTGGAGAAGGCAGCTGAAAAGAGATCTTCCTTCCTAAGCACCCACATCACCTTCTaGCTTCCCACTACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GWEHHLEKAAEKRSSFLSTHITF*LPTTLL
Trigger: AAGAAGGGTAGTGGGAAGGCAGAAGGTGATGTGGGT...GCTTAGGAAGGAAGATCTCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp GGTTGGGAGCACCATCTGGAGAAGGCAGCTGAAAAGAGATCTTCCTTCCTAAGCTCTCTTGCTCACTGTTaGTCTGCCTCCAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: GWEHHLEKAAEKRSSFLSSLAHC*SASRSL
Trigger: TAAGCTCCTGGAGGCAGAGCAACAGTGAGCAAGAGA...GCTTAGGAAGGAAGATCTCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATCAGGATGACCCTGCTTaGTGTGATCTCCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHQDDPA*CDLQVR
Trigger: TCTTACCTGGAGATCACACCAAGCAGGGTCATCCTG...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTGAGCTCCTACAAGTTTaGCATCCTGGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAELLQV*HPGSGT
Trigger: AGTTCCTGAACCAGGATGCCAAACTTGTAGGAGCTC...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp ATGGAAACATCTGGCAGCCATAAGGGTTGCTCATCTTaGCACTCCTGGCCTGAGAACGGACAGATGAGTCTG +
Preference number: 4 (lower is better)
Translates to: METSGSHKGCSS*HSWPENGQMSL
Trigger: CAGACTCATCTGTCCGTTCTCAGGCCAGGAGTGCAAAGATGAGCAACCCTTATGGCTGCCAGATGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp TCAGCTGCCTCTGTTTCCCCATTTGAAATGACAGTCCTCTTCTTTGCAGGTATTCTCTTCCTGGGACTCTaGGAAGAGGGGCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: SAASVSPFEMTVLFFAGILFLGL*EEGQPQ
Trigger: TTGGGGTTGCCCCTCTTCTCAGAGTCCCAGGAAGAG...AATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTCGCCAATGCCAACGGTaGAGATGCAGATCTGACCTC +
Preference number: 4 (lower is better)
Translates to: MSTCSCTCGGQKITLVSIRQCQR*RCRSDL
Trigger: GAGGTCAGATCTGCATCTTCACCGTTGGCATTGGCG...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTGCTGATTCTGGAATCTaGATCTGGAACTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRSGISILHLAKHPQPPAADSGI*IWNSAS
Trigger: GGAGGCTGAGTTCCAGATGCAGATTCCAGAATCAGC...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTCGCACGCTGATGCTATaGTCGTATTTCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCRTLML*SYFPSL
Trigger: GAGGCTGGGGAAATACGAGCATAGCATCAGCGTGCG...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTTGCTCACTGTTGCTCTaGCTCCAGGAGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MSTCSCTCGGQKITLVSICSLLL*LQELSS
Trigger: GCTGCTAAGCTCCTGGAGGCAGAGCAACAGTGAGCA...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTCAGGTTTCCTGGGCGTaGTCAGGCCCAGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLQVSWA*SGPVHS
Trigger: AGAGTGCACTGGGCCTGAGCACGCCCAGGAAACCTG...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTCGAAGACCACGTTCTTaGGTAGAGGAGGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PRSGISILHLAKHPQPPARRPRS*VEEGGF
Trigger: AAAACCTCCCTCCTCTACCCAAGAACGTGGTCTTCG...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp GGTTGGGAGCACCATCTGGAGAAGGCAGCTGAAAAGAGATCTTCCTTCCTAAGCATATTGAAGCGATCCTaGGGTCGGAGGTCATTGAGA +
Preference number: 4 (lower is better)
Translates to: GWEHHLEKAAEKRSSFLSILKRS*GRRSLR
Trigger: TCTCAATGACCTCCGACCCCAGGATCGCTTCAATAT...GCTTAGGAAGGAAGATCTCTTTTCAGCTGCCTTCTCCAGATGGTGCTCCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTCCCAGGTGGTCTCTCTaGAAGGGTGCTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCPRWSL*KGAGFL
Trigger: CAAAAACCCAGCACCCTTCCAGAGAGACCACCTGGG...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp TTCAACTGTACTCCTGCTCTAAGTCCTATGTGTGACTaGGGGAAAGTGGCTCAGCTGCCTCTGTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FNCTPALSPMCD*GKVAQLPLFPH
Trigger: ATGGGGAAACAGAGGCAGCTGAGCCACTTTCCCCAAGTCACACATAGGACTTAGAGCAGGAGTACAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp CTTTGGGGCCCAGAAGTGGTATCTCTATACTTCATCTaGCCAAACATCCCCAGCCTCCAGCTAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LWGPEVVSLYFI*PNIPSLQLEVV
Trigger: TACCACTTCTAGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGGCCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp TCAGCTGCCTCTGTTTCCCCATTTGAAATGACAGTCCTCTTCTTTGCAGGTATTCCACCATGGAAGCGCTaGTGTCAAGCACGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SAASVSPFEMTVLFFAGIPPWKR*CQARRP
Trigger: TGGTCTTCGTGCTTGACATCAGCGCTTCCATGGTGG...AATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTAGTTTGATGGCAGCCTaGAGGGCCCCATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCSLMAA*RAPLMS
Trigger: AGACATCAATGGGGCCCTTCAGGCTGCCATCAAACT...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTGGAACAGGGTCTTGGTaGCATGCTCTACTACGTCAG +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCGTGSW*HALLRQ
Trigger: CTGACGTAGTAGAGCATGCCACCAAGACCCTGTTCC...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTTCTCTGGAAGGGTGCTaGGTTTTTGTACAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PRSGISILHLAKHPQPPASLEGC*VFVQVD
Trigger: ATCCACCTGTACAAAAACCCAGCACCCTTCCAGAGA...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTTTGTTTCCAGACCACTaGAACTCGGCGCCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: MSTCSCTCGGQKITLVSILFPDH*NSAPFH
Trigger: GTGAAAGGGCGCCGAGTTCCAGTGGTCTGGAAACAA...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp TGTTCTCAGGACTTGACCCCTTCTGAAAGACTCCACTaGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: CSQDLTPSERLH*EGPLQSRFRLK
Trigger: CTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGAAGGGGTCAAGTCCTGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp CTTCCCTCTGAGAATGTACAGTTGATTCTTCCCACCCATAGGCTGAGCCGCTCATCACTAAAGACGCTTTaGACATGTCACTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LPSENVQLILPTHRLSRSSLKTL*TCHSRF
Trigger: AAAACGGGAGTGACATGTTCAAAGCGTCTTTAGTGA...TGAGCGGCTCAGCCTATGGGTGGGAAGAATCAACTGTACATTCTCAGAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCTCCTGGTTCAGGAACTaGCCTAGCAGTCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCSWFRN*PSSPWQ
Trigger: CTGCCACGGACTGCTAGGTCAGTTCCTGAACCAGGA...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTGTCTCTCTGGAAGGGTaGTGGGTTTTTGTACAGGTG +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCVSLEG*WVFVQV
Trigger: CACCTGTACAAAAACCCAGCACCCTTCCAGAGAGAC...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTTGGAACTCAGCCTCCTaGTCTTCAGAAGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCWNSAS*SSEALL
Trigger: CAACAGAGCTTCTGAAGACCAGGAGGCTGAGTTCCA...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTTTCTTCCTGCTGTTGTaGAGAGGCAGCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: MSTCSCTCGGQKITLVSIFFLLL*RGSTSK
Trigger: CTTGGAAGTGCTGCCTCTCCACAACAGCAGGAAGAA...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCCTTCAGAAGCTCTGTTaGGCATCCTGCAGGACACCG +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCLQKLC*ASCRTP
Trigger: CGGTGTCCTGCAGGATGCTCAACAGAGCTTCTGAAG...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp TCAGCTGCCTCTGTTTCCCCATTTGAAATGACAGTCCTCTTCTTTGCAGGTATTACACCAGAGTTCAGATaGTCAGAGACCAGACGTAGG +
Preference number: 4 (lower is better)
Translates to: SAASVSPFEMTVLFFAGITPEFR*SETRRR
Trigger: CCTACGTCTGGTCTCTGATCATCTGAACTCTGGTGT...AATACCTGCAAAGAAGAGGACTGTCATTTCAAATGGGGAAACAGAGGCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATCCAGCAGTCTACCTGTaGTTGCCCGTTGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDPAVYL*LPVVNL
Trigger: AAGATTTACAACGGGCAAGCACAGGTAGACTGCTGG...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCGTGAAGATGCAGATCTaGCCTCTGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCVKMQI*PLVASL
Trigger: CAAGGAAGCCACCAGAGGTCAGATCTGCATCTTCAC...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp GAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAGCCTTCTGCCTCAGCTaGTCTTTCTCTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EMWESLLRVSFPWFIHSQAFCLS*SFSCSL
Trigger: CAGTGAGCAAGAGAAAGAGCAGCTGAGGCAGAAGGC...TTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTAAAGTCCTGGGCCTTCTaGCTCAGCTGCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLKSWAF*LSCSFS
Trigger: AGAGAAAGAGCAGCTGAGGCAGAAGGCCCAGGACTT...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTTGGTGCGGAAGTAGGTaGGCTGTTTCTTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLWCGSR*AVSCDH
Trigger: ATGGTCACAAGAAACAGCGCACCTACTTCCGCACCA...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCAGCTGCTCTTTCTCTTaGTCACTGTTGCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCSCSFS*SLLLCL
Trigger: GAGGCAGAGCAACAGTGAGCAAGAGAAAGAGCAGCT...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGCTCCTTGCCTCTTCCTaGGACTCTGAGAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLLLASS*DSEKRG
Trigger: GCCCCTCTTCTCAGAGTCCCAGGAAGAGGCAAGGAG...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATGCAATCTTAGCTTGTTaGACCACAGTAGGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDAILAC*TTVGLK
Trigger: CTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGC...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp GAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAACAGGTAAGATCTCTCTaGCCGGTTGATGAGGATGGT +
Preference number: 4 (lower is better)
Translates to: EMWESLLRVSFPWFIHSQQVRSL*PVDEDG
Trigger: ACCATCCTCATCAACCGGCCAGAGAGATCTTACCTG...TTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTCAGCTTTGTCCTTGCTaGGAATCACTAAAGACGCTT +
Preference number: 4 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLQLCPC*ESLKTL
Trigger: AAGCGTCTTTAGTGATTCCCAGCAAGGACAAAGCTG...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGCACTACCCTTCTTCCTaGTGTTGTGGAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLHYPSS*CCGEAA
Trigger: TGCTGCCTCTCCACAACAGCAGGAAGAAGGGTAGTG...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCCTGCCATCAAGGGCTTaGTTTTCAGTCTTTGCAACA +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCLPSRA*FSVFAT
Trigger: TGTTGCAAAGACTGAAAACCAAGCCCTTGATGGCAG...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CCA 90 bp AGAATGCCAGGTCTAACATGTGAATCCTTCAGGTTCAACTGTACTCCTGCTCTAGCAAATGTCTCATTTTaGTTGATGAGAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RMPGLTCESFRFNCTPALANVSF*LMRVEG
Trigger: CCCTTCTACTCTCATCAACCAAAATGAGACATTTGC...TAGAGCAGGAGTACAGTTGAACCTGAAGGATTCACATGTTAGACCTGGCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp AAATGCTCGAGGAAAAGAAATGCTTCACCAGGTAACAAAAGAATGCCAGGTCTAGAAGCTCTTCATAACTaGGGAAGAAAGCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KCSRKRNASPGNKRMPGLEALHN*GRKQLC
Trigger: ACAAAGCTGCTTTCTTCCTCAGTTATGAAGAGCTTC...TAGACCTGGCATTCTTTTGTTACCTGGTGAAGCATTTCTTTTCCTCGAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR TCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCAAATCCACTACAAAATaGGGATCACCATCCACTGAT +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCKSTTK*GSPSTD
Trigger: ATCAGTGGATGGTGATCCTCATTTTGTAGTGGATTT...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp ATTAGAATTGCTTGCTATAAATTGGGGGTTATTTCTTaGAGCAAGGGCAACTTAGCAGTGGCTTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: IRIACYKLGVIS*SKGNLAVALQL
Trigger: CAGTTGCAAAGCCACTGCTAAGTTGCCCTTGCTCAAAGAAATAACCCCCAATTTATAGCAAGCAATTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp AAGCAGAATCTGTTCTTGCCTAATGATACTCCTGTGTaGATGGTGAAGACAATATCTAGAACAACACACTCG +
Preference number: 4 (lower is better)
Translates to: KQNLFLPNDTPV*MVKTISRTTHS
Trigger: CGAGTGTGTTGTTCTAGATATTGTCTTCACCATCAACACAGGAGTATCATTAGGCAAGAACAGATTCTGCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp TGTAGGACTCTTTCAGATCTTACAACAGCATTGCTTTaGTATATTCTGGGTAGCCCGAATAAAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CRTLSDLTTALL*YILGSPNKGGN
Trigger: GTTTCCACCTTTATTCGGGCTACCCAGAATATACAAAAGCAATGCTGTTGTAAGATCTGAAAGAGTCCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCCTTTTACGCTCTCACTaGTTTTCTTATCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCLLRSH*FSYLSV
Trigger: CACAGAAAGATAAGAAAAGCAGTGAGAGCGTAAAAG...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGAAGCAGCTTTGTCCTTaGTGGGAATCACTAAAGACG +
Preference number: 4 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLKQLCP*WESLKT
Trigger: CGTCTTTAGTGATTCCCAGCAAGGACAAAGCTGCTT...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp GTGACTCTGCATTCAATTAGAATTGCTTGCTATAAATaGGGGGTTATTTCTTTGAGCAAGGGCAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: VTLHSIRIACYK*GVISLSKGNLA
Trigger: TGCTAAGTTGCCCTTGCTCAAAGAAATAACCCCCAATTTATAGCAAGCAATTCTAATTGAATGCAGAGTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR GCA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGATGTCACCAATGTTCTaGTCTCTCTCGACATCATAC +
Preference number: 4 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLMSPMF*SLSTSY
Trigger: GTATGATGTCGAGAGAGAGCAGAACATTGGTGACAT...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
3UTR CAA 72 bp AACATTGCATCTCTAAGTATTTGGTTAGCTGTGTTATaGTATTTGCTGTTTATTTTAGCTGGACCACGTCCT +
Preference number: 4 (lower is better)
Translates to: NIASLSIWLAVL*YLLFILAGPRP
Trigger: AGGACGTGGTCCAGCTAAAATAAACAGCAAATACAATAACACAGCTAACCAAATACTTAGAGATGCAATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp AGCACGACTTGCTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTCCTaGGACTCTGAGAAGAGGGGCAACCCCAAGCACAGCCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: STTCSEVSSQLLASS*DSEKRGNPKHSPSS
Trigger: GCTGCTAGGGCTGTGCTTGGGGTTGCCCCTCTTCTCAGAGTCCCAGGAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCAAGTCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp AGTCTTTGCAACAGCCTGAGCTGCCTGGGGACCCTGAGCACGACTTaGTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTCCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: SLCNSLSCLGTLSTT*SEVSSQLLASSWDS
Trigger: AGAGTCCCAGGAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCAAGTCGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTTGCAAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp GAGCCTCCCTGGTCTGCTGGAGTTTCGCTCCCACCATGGAAGCGCTaGTGTCAAGCACGAAGACCACGTTCTTGGGTAGAGGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EPPWSAGVSLPPWKR*CQARRPRSWVEEGG
Trigger: ACCTCCCTCCTCTACCCAAGAACGTGGTCTTCGTGCTTGACATCAGCGCTTCCATGGTGGGAGCGAAACTCCAGCAGACCAGGGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp AGAAAGAAGCGGGGTCCGGATCTCATCATAGAACCCGATGAGCTGTaGGCCCGCCTTGTCCTCCTCATGAACACGCCTCGTGAGACCGCA +
Preference number: 5 (lower is better)
Translates to: RKKRGPDLIIEPDEL*ARLVLLMNTPRETA
Trigger: TGCGGTCTCACGAGGCGTGTTCATGAGGAGGACAAGGCGGGCGCACAGCTCATCGGGTTCTATGATGAGATCCGGACCCCGCTTCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp GCAGGGGAGTACCAGCCTGTCCCCACCGTCCAGGATGACCCTGCTTaGTGTGATCTCCAGGTAAGATCTCTCTGGCCGGTTGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: AGEYQPVPTVQDDPA*CDLQVRSLWPVDED
Trigger: ATCCTCATCAACCGGCCAGAGAGATCTTACCTGGAGATCACACCAAGCAGGGTCATCCTGGACGGTGGGGACAGGCTGGTACTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp ACTGACCTAGCAGTCCGTGGCAGTTGTCGGAGAGACCTCTGCTGTTaGCGATGTAGAAGCCCAGGTGGTCTCTCTGGAAGGGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TDLAVRGSCRRDLCC*RCRSPGGLSGRVLG
Trigger: ACCCAGCACCCTTCCAGAGAGACCACCTGGGCTTCTACATCGCCAACAGCAGAGGTCTCTCCGACAACTGCCACGGACTGCTAGGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp TACCCTTCTTCCTGCTGTTGTGGAGAGGCAGCACTTCCAAGGATGTaGTGCCCGATCGCTCCAGGATGTCCACCTCCACAGTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: YPSSCCCGEAALPRM*CPIAPGCPPPQSAS
Trigger: GGAGGCTGACTGTGGAGGTGGACATCCTGGAGCGATCGGGCATCACATCCTTGGAAGTGCTGCCTCTCCACAACAGCAGGAAGAAGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp TCAGGAACTGACCTAGCAGTCCGTGGCAGTTGTCGGAGAGACCTCTaGTGTTGGCGATGTAGAAGCCCAGGTGGTCTCTCTGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SGTDLAVRGSCRRDL*CWRCRSPGGLSGRV
Trigger: CACCCTTCCAGAGAGACCACCTGGGCTTCTACATCGCCAACAGCAGAGGTCTCTCCGACAACTGCCACGGACTGCTAGGTCAGTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp ATGGGGCCTGTCGGTCTCAGGTTTCCTGGGCGTGCTCAGGCCCAGTaGACTCTCTGTGTCAAACGGATGAGATGCCAGGTAGTCCTTATA +
Preference number: 5 (lower is better)
Translates to: MGPVGLRFPGRAQAQ*TLCVKRMRCQVVLI
Trigger: TATAAGGACTACCTGGCATCTCATCCGTTTGACACAGAGAGTGCACTGGGCCTGAGCACGCCCAGGAAACCTGAGACCGACAGGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp GTCCAGGATGACCCTGCTTGGTGTGATCTCCAGGTAAGATCTCTCTaGCCGGTTGATGAGGATGGTGATGGTGCGGAAGTAGGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: VQDDPAWCDLQVRSL*PVDEDGDGAEVGAL
Trigger: CAGCGCACCTACTTCCGCACCATCACCATCCTCATCAACCGGCCAGAGAGATCTTACCTGGAGATCACACCAAGCAGGGTCATCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp TGCAGACATGCCATAGGTGTCCTCCAGCTGGTTTGTGCGGAGCCCTaGCTTCCTCAGCTTCATGGAGGTGAAGGGGGTGAGGAAATGATA +
Preference number: 5 (lower is better)
Translates to: CRHAIGVLQLVCAEP*LPQLHGGEGGEEMI
Trigger: TATCATTTCCTCACCCCCTTCACCTCCATGAAGCTGAGGAAGCCAGGGCTCCGCACAAACCAGCTGGAGGACACCTATGGCATGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp AATGTTGCCCTGGATGACCACGGTGATGTTGGCATTGGCAGACACTaGCACCTCCAATCCTCGACTCCCTACTACCACGCTCTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: NVALDDHGDVGIGRH*HLQSSTPYYHALVA
Trigger: TGCAACCAGAGCGTGGTAGTAGGGAGTCGAGGATTGGAGGTGTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp GGGCGTGCTCAGGCCCAGTGCACTCTCTGTGTCAAACGGATGAGATaGCAGGTAGTCCTTATAGACACCGTCAATCAGCTTGGCAGCATT +
Preference number: 5 (lower is better)
Translates to: GRAQAQCTLCVKRMR*QVVLIDTVNQLGSI
Trigger: AATGCTGCCAAGCTGATTGACGGTGTCTATAAGGACTACCTGGCATCTCATCCGTTTGACACAGAGAGTGCACTGGGCCTGAGCACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CTCATGATCCCTCTCCCCATCCTGGATGGGTCCTGTCTTCTTCAGCTAACCGCTCAGCTGCTCTTTCTCTaGCTCACTGTTGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LMIPLPILDGSCLLQLTAQLLFL*LTVALP
Trigger: AGGCAGAGCAACAGTGAGCAAGAGAAAGAGCAGCTG...AGCGGTTAGCTGAAGAAGACAGGACCCATCCAGGATGGGGAGAGGGATCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTACTACCACGCTCTGGTaGCAGGGGAGTACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PRSGISILHLAKHPQPPATTTLW*QGSTSL
Trigger: CAGGCTGGTACTCCCCTGCAACCAGAGCGTGGTAGT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp TATTCCTCAGGAGCTCCTACAAGTTTGGCATCCTGGTTCAGGAACTaGCCTAGCAGTCCGTGGCAGTTGTCGGAGAGACCTCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: YSSGAPTSLASWFRN*PSSPWQLSERPLLL
Trigger: CAACAGCAGAGGTCTCTCCGACAACTGCCACGGACTGCTAGGTCAGTTCCTGAACCAGGATGCCAAACTTGTAGGAGCTCCTGAGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp TACCTGTGCTTGCCCGTTGTAAATCTTCCTTTGTTTCCAGACCACTaGAACTCGGCGCCCTTTCACCTTCAGGATAGCCTCAGGCATCCC +
Preference number: 5 (lower is better)
Translates to: YLCLPVVNLPLFPDH*NSAPFHLQDSLRHP
Trigger: GGGATGCCTGAGGCTATCCTGAAGGTGAAAGGGCGCCGAGTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAAGCACAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTTTCTCTTGCTCACTGTaGCTCTGCCTCCAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAFSCSL*LCLQEL
Trigger: AAGCTCCTGGAGGCAGAGCAACAGTGAGCAAGAGAA...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp TGCAGTCTCTGGTTTCCAGATTTCCACATCCTCAGGGTGACTTTGGGGCCCAGAATGACAAAGGCAATGTaGCCCTGGATGACCACGGTG +
Preference number: 5 (lower is better)
Translates to: CSLWFPDFHILRVTLGPRMTKAM*PWMTTV
Trigger: CACCGTGGTCATCCAGGGCAACATTGCCTTTGTCAT...TCTGGGCCCCAAAGTCACCCTGAGGATGTGGAAATCTGGAAACCAGAGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp GGGTTTTTGTACAGGTGGATGAGGATGACAAAGGCAATGTTGCCCTaGATGACCACGGTGATGTTGGCATTGGCAGACACTGACACCTCC +
Preference number: 5 (lower is better)
Translates to: GFLYRWMRMTKAMLP*MTTVMLALADTDTS
Trigger: GGAGGTGTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATTGCCTTTGTCATCCTCATCCACCTGTACAAAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp TTGAAGTCCACGTCATCGCCAATGCCAACGGTGAAGATGCAGATCTaGCCTCTGGTGGCTTCCTTGGTGTTGCTGAGAATCTTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: LKSTSSPMPTVKMQI*PLVASLVLLRILRV
Trigger: TACCCTCAAGATTCTCAGCAACACCAAGGAAGCCACCAGAGGTCAGATCTGCATCTTCACCGTTGGCATTGGCGATGACGTGGACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp ACAGGGTCTTGGTGGCATGCTCTACTACGTCAGGAGGATAATCTATaGGGATGTCAGAAAGAAGCGGGGTCCGGATCTCATCATAGAACC +
Preference number: 5 (lower is better)
Translates to: TGSWWHALLRQEDNL*GCQKEAGSGSHHRT
Trigger: GGTTCTATGATGAGATCCGGACCCCGCTTCTTTCTGACATCCGCATAGATTATCCTCCTGACGTAGTAGAGCATGCCACCAAGACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp TCTGCTGTTGGCGATGTAGAAGCCCAGGTGGTCTCTCTGGAAGGGTaGTGGGTTTTTGTACAGGTGGATGAGGATGACAAAGGCAATGTT +
Preference number: 5 (lower is better)
Translates to: SAVGDVEAQVVSLEG*WVFVQVDEDDKGNV
Trigger: AACATTGCCTTTGTCATCCTCATCCACCTGTACAAAAACCCAGCACCCTTCCAGAGAGACCACCTGGGCTTCTACATCGCCAACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATCTTGGTTTTCAGTCTTaGCAACAGCCTGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHLGFQS*QQPELP
Trigger: AGGCAGCTCAGGCTGTTGCAAAGACTGAAAACCAAG...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCATGCATGGTTTTCCCTTTCTCTGTTCAATCCTATCAGTCCCTGTTCACCTGTCCCTTCTTCCTGCTGTaGTGGAGAGGCAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: PCMVFPFSVQSYQSLFTCPFFLL*WRGSTS
Trigger: GGAAGTGCTGCCTCTCCACAACAGCAGGAAGAAGGG...ACAGGTGAACAGGGACTGATAGGATTGAACAGAGAAAGGGAAAACCATGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTGAGAACCCAATGATATaGAAGCGATCCTGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: PRSGISILHLAKHPQPPAENPMI*KRSWGR
Trigger: CCGACCCCAGGATCGCTTCAATATCATTGGGTTCTC...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTAAGCAGACAGTGAGTTaGCTTAGGGGGAAATCCACT +
Preference number: 5 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAKQTVS*LRGKST
Trigger: AGTGGATTTCCCCCTAAGCAAACTCACTGTCTGCTT...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp GGTGAAGGCATAGCGGGAAATGATGGTAGACTTCACCGAAAACTCTaGCATCAAGGGCTTGGTTTTCAGTCTTTGCAACAGCCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GEGIAGNDGRLHRKL*HQGLGFQSLQQPEL
Trigger: CAGCTCAGGCTGTTGCAAAGACTGAAAACCAAGCCCTTGATGGCAGAGTTTTCGGTGAAGTCTACCATCATTTCCCGCTATGCCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCAAACATCCCCAGCCTCCAGCTAGAAGTGGTAGATCATGGAAAGGTGGAATGGAGGAAGAAAGCAGCTTaGTCCTTGCTGGGAATCACT +
Preference number: 5 (lower is better)
Translates to: PNIPSLQLEVVDHGKVEWRKKAA*SLLGIT
Trigger: AGTGATTCCCAGCAAGGACAAAGCTGCTTTCTTCCT...CCATTCCACCTTTCCATGATCTACCACTTCTAGCTGGAGGCTGGGGATGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTGATCTCTCTGGCCGGTaGATGAGGATGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: MSTCSCTCGGQKITLVSIDLSGR*MRMVMV
Trigger: CACCATCACCATCCTCATCAACCGGCCAGAGAGATC...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp CACATTTTAATCCGATTGGAGAACCCAATGATATTGAAGCGATCCTaGGGTCGGAGGTCATTGAGAATTGTGACGAGAGCCTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HILIRLENPMILKRS*GRRSLRIVTRASLV
Trigger: GACCAGGGAGGCTCTCGTCACAATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGATTAAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCTTTCTTCATTGGGGGAGGGGGTGGTACTGGAAGCCAAAGCCACAATTCTGCTATCACTAAAGACGCTTaGAACATGTCACTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: PFFIGGGGGTGSQSHNSAITKDA*NMSLPF
Trigger: AAACGGGAGTGACATGTTCAAAGCGTCTTTAGTGAT...AGCAGAATTGTGGCTTTGGCTTCCAGTACCACCCCCTCCCCCAATGAAGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp ATGTCCACGTGTTCATGCACATGTGGAGGCCAGAAGATAACCTTGGTTTCCATTACGAAGACCACGTTCTaGGGTAGAGGAGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: MSTCSCTCGGQKITLVSITKTTF*GRGGRF
Trigger: AAACCTCCCTCCTCTACCCAAGAACGTGGTCTTCGT...AATGGAAACCAAGGTTATCTTCTGGCCTCCACATGTGCATGAACACGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATTTAGGGAACAGGGTCTaGGTGGCATGCTCTACTACG +
Preference number: 5 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDLGNRV*VACSTT
Trigger: CGTAGTAGAGCATGCCACCAAGACCCTGTTCCCTAA...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CCCAGAAGTGGTATCTCTATACTTCATCTTGCCAAACATCCCCAGCCTCCAGCTACAAATTTCTTACTGTaGCTGGCAGTGACCTCCACA +
Preference number: 5 (lower is better)
Translates to: PRSGISILHLAKHPQPPATNFLL*LAVTST
Trigger: TGTGGAGGTCACTGCCAGCAACAGTAAGAAATTTGT...AGCTGGAGGCTGGGGATGTTTGGCAAGATGAAGTATAGAGATACCACTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp GACCTCCACATGCAGTTGATCAAACTTCTTGTCCACCATCTTCCCTaGAATCACTATCTCAGAGCCATTGAAGTAGTTAGGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: DLHMQLIKLLVHHLP*NHYLRAIEVVREQG
Trigger: ACCCTGTTCCCTAACTACTTCAATGGCTCTGAGATAGTGATTGCAGGGAAGATGGTGGACAAGAAGTTTGATCAACTGCATGTGGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 90 bp AATCAGCTTGGCAGCATTGTTTCTGTCAAACCAGCAGTCTACCTGTaGTTGCCCGTTGTAAATCTTCCTTTGTTTCCAGACCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: NQLGSIVSVKPAVYL*LPVVNLPLFPDHWN
Trigger: GTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAAGCACAGGTAGACTGCTGGTTTGACAGAAACAATGCTGCCAAGCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp ACATGGCGGAGAAGAACACAGGGTGTAAGAAGGGAGATCCGTGTTCTGCTGCATATAAGCATGGTGAAGTaGGTGATGAAAGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: TWRRRTQGVRREIRVLLHISMVK*VMKADS
Trigger: AGAATCAGCTTTCATCACCAACTTCACCATGCTTAT...ATGCAGCAGAACACGGATCTCCCTTCTTACACCCTGTGTTCTTCTCCGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCTGGGGTCGGAGGTCATaGAGAATTGTGACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCWGRRS*RIVTRA
Trigger: GGCTCTCGTCACAATTCTCAATGACCTCCGACCCCA...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 90 bp GGAAGAAAGCAGCTTTGTCCTTGCTGGGAATCACTAAAGACGCTTTaGACATGTCACTCCCGTTTTCTTCATTATCGTCTGAGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GRKQLCPCWESLKTL*TCHSRFLHYRLRFC
Trigger: ACAGAACCTCAGACGATAATGAAGAAAACGGGAGTGACATGTTCAAAGCGTCTTTAGTGATTCCCAGCAAGGACAAAGCTGCTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp TCTGAAAGACTCCACTTGGAGGGACCGTTACAGAGCAGATTTAGGCTTAAGGATGTTGTAAATCTTCCTTaGTTTCCAGACCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: SERLHLEGPLQSRFRLKDVVNLP*FPDHWN
Trigger: GTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAAC...ATCCTTAAGCCTAAATCTGCTCTGTAACGGTCCCTCCAAGTGGAGTCTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp GGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAACTCATGCGCAGTCTACCTGTGCTaGCCCGTTGTAAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: GISPQSFFPLVYSFTNSCAVYLC*PVVNLP
Trigger: AGGAAGATTTACAACGGGCAAGCACAGGTAGACTGC...GCATGAGTTTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTACACCGTCAATCAGCTaGGCAGCATTGTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLTPSIS*AALFLS
Trigger: TGACAGAAACAATGCTGCCAAGCTGATTGACGGTGT...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp GAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAAATCAGCTTGGCAGCATaGTTTCTGTCAAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: EMWESLLRVSFPWFIHSQISLAA*FLSNQQ
Trigger: CTGCTGGTTTGACAGAAACAATGCTGCCAAGCTGAT...TTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 90 bp ACGATGAAATCTCCCAAGATCCCATTCTGGGCAATCTTAGCTTGTTaGACCACAGTAGGCTTAAAGATGACTTTGGCAAATGTCTCATTT +
Preference number: 5 (lower is better)
Translates to: TMKSPKIPFWAILAC*TTVGLKMTLANVSF
Trigger: AAATGAGACATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCAGAATGGGATCTTGGGAGATTTCATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp TATATTCTGGGTAGCCCGAATAAAGGTGGAAACTCATGTTGTGGAGACTCTCTTAATGTCTCATTTTGGTaGATGAGAGTAGAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: YILGSPNKGGNSCCGDSLNVSFW*MRVEGG
Trigger: TCCCCCTTCTACTCTCATCAACCAAAATGAGACATT...AAGAGAGTCTCCACAACATGAGTTTCCACCTTTATTCGGGCTACCCAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp GAGATGTGGGAATCTCTCCTCAGAGTTTCTTTCCCTTGGTTTATTCATTCACAATTGCCATTCCTAATGTaGTCAGGAGTCACTGGTAGT +
Preference number: 5 (lower is better)
Translates to: EMWESLLRVSFPWFIHSQLPFLM*SGVTGS
Trigger: ACTACCAGTGACTCCTGACAACATTAGGAATGGCAA...TTGTGAATGAATAAACCAAGGGAAAGAAACTCTGAGGAGAGATTCCCACATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGAAAGCAGCTTTGTCCTaGCTGGGAATCACTAAAGAC +
Preference number: 5 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLKAALS*LGITKD
Trigger: GTCTTTAGTGATTCCCAGCAAGGACAAAGCTGCTTT...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS-3UTR CAA 90 bp CAGTTGTTTAGAGATCCAATGTACAAACTATTTGTGTGGATAATTGGTAGTCTGGGCAAATGTCTCATTTaGGTTGATGAGAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: QLFRDPMYKLFVWIIGSLGKCLI*VDESRR
Trigger: CCTTCTACTCTCATCAACCAAAATGAGACATTTGCC...CAGACTACCAATTATCCACACAAATAGTTTGTACATTGGATCTCTAAACAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp AACCCGATGAGCTGTGCGCCCGCCTTGTCCTCCTCATaGACACGCCTCGTGAGACCGCAGTTCTCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: NPMSCAPALSSS*TRLVRPQFSSE
Trigger: CTCGCTGGAGAACTGCGGTCTCACGAGGCGTGTTCATGAGGAGGACAAGGCGGGCGCACAGCTCATCGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp AACAGCCTGAGCTGCCTGGGGACCCTGAGCACGACTTaGTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: NSLSCLGTLSTT*SEVSSQLLASS
Trigger: GGAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCAAGTCGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp CCTCCAATCCTCGACTCCCTACTACCACGCTCTGGTTaGAGGGGAGTACCAGCCTGTCCCCACCGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: PPILDSLLPRSG*RGVPACPHRPG
Trigger: TCCTGGACGGTGGGGACAGGCTGGTACTCCCCTGCAACCAGAGCGTGGTAGTAGGGAGTCGAGGATTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp GACACCTCCAATCCTCGACTCCCTACTACCACGCTCTaGTTGCAGGGGAGTACCAGCCTGTCCCCACCGTCC +
Preference number: 6 (lower is better)
Translates to: DTSNPRLPTTTL*LQGSTSLSPPS
Trigger: GGACGGTGGGGACAGGCTGGTACTCCCCTGCAACCAGAGCGTGGTAGTAGGGAGTCGAGGATTGGAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp CAACAGCCTGAGCTGCCTGGGGACCCTGAGCACGACTaGCTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: QQPELPGDPEHD*LRGVVPTPCLF
Trigger: GAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCAAGTCGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp ACCTCCAATCCTCGACTCCCTACTACCACGCTCTGGTaGCAGGGGAGTACCAGCCTGTCCCCACCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSNPRLPTTTLW*QGSTSLSPPSR
Trigger: CCTGGACGGTGGGGACAGGCTGGTACTCCCCTGCAACCAGAGCGTGGTAGTAGGGAGTCGAGGATTGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp CAGTCTTTGCAACAGCCTGAGCTGCCTGGGGACCCTGAGCACGACTaGCTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTCCTGGGACTC +
Preference number: 6 (lower is better)
Translates to: QSLQQPELPGDPEHD*LRGVVPTPCLFLGL
Trigger: GAGTCCCAGGAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCAAGTCGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTTGCAAAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp CGGGGTCCGGATCTCATCATAGAACCCGATGAGCTGTaGGCCCGCCTTGTCCTCCTCATGAACACGCCTCGT +
Preference number: 6 (lower is better)
Translates to: RGPDLIIEPDEL*ARLVLLMNTPR
Trigger: ACGAGGCGTGTTCATGAGGAGGACAAGGCGGGCGCACAGCTCATCGGGTTCTATGATGAGATCCGGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp TGCTCCGAGGTGTCGTCCCAACTCCTTGCCTCTTCCTaGGACTCTGAGAAGAGGGGCAACCCCAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: CSEVSSQLLASS*DSEKRGNPKHS
Trigger: GCTGTGCTTGGGGTTGCCCCTCTTCTCAGAGTCCCAGGAAGAGGCAAGGAGTTGGGACGACACCTCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp GCCATAGGTGTCCTCCAGCTGGTTTGTGCGGAGCCCTaGCTTCCTCAGCTTCATGGAGGTGAAGGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: AIGVLQLVCAEP*LPQLHGGEGGE
Trigger: CTCACCCCCTTCACCTCCATGAAGCTGAGGAAGCCAGGGCTCCGCACAAACCAGCTGGAGGACACCTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp TCCTGCTGTTGTGGAGAGGCAGCACTTCCAAGGATGTaGTGCCCGATCGCTCCAGGATGTCCACCTCCACAG +
Preference number: 6 (lower is better)
Translates to: SCCCGEAALPRM*CPIAPGCPPPQ
Trigger: CTGTGGAGGTGGACATCCTGGAGCGATCGGGCATCACATCCTTGGAAGTGCTGCCTCTCCACAACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp AAGGGCTTGGTTTTCAGTCTTTGCAACAGCCTGAGCTaGCTGGGGACCCTGAGCACGACTTGCTCCGAGGTG +
Preference number: 6 (lower is better)
Translates to: KGLVFSLCNSLS*LGTLSTTCSEV
Trigger: CACCTCGGAGCAAGTCGTGCTCAGGGTCCCCAGGCAGCTCAGGCTGTTGCAAAGACTGAAAACCAAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp GACCTAGCAGTCCGTGGCAGTTGTCGGAGAGACCTCTaGTGTTGGCGATGTAGAAGCCCAGGTGGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: DLAVRGSCRRDL*CWRCRSPGGLS
Trigger: AGAGAGACCACCTGGGCTTCTACATCGCCAACAGCAGAGGTCTCTCCGACAACTGCCACGGACTGCTAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp GTCGGTCTCAGGTTTCCTGGGCGTGCTCAGGCCCAGTaGACTCTCTGTGTCAAACGGATGAGATGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: VGLRFPGRAQAQ*TLCVKRMRCQV
Trigger: TACCTGGCATCTCATCCGTTTGACACAGAGAGTGCACTGGGCCTGAGCACGCCCAGGAAACCTGAGACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp TACCAGCCTGTCCCCACCGTCCAGGATGACCCTGCTTaGTGTGATCTCCAGGTAAGATCTCTCTGGCCGGTT +
Preference number: 6 (lower is better)
Translates to: YQPVPTVQDDPA*CDLQVRSLWPV
Trigger: AACCGGCCAGAGAGATCTTACCTGGAGATCACACCAAGCAGGGTCATCCTGGACGGTGGGGACAGGCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp CTGGATGACCACGGTGATGTTGGCATTGGCAGACACTaGCACCTCCAATCCTCGACTCCCTACTACCACGCT +
Preference number: 6 (lower is better)
Translates to: LDDHGDVGIGRH*HLQSSTPYYHA
Trigger: AGCGTGGTAGTAGGGAGTCGAGGATTGGAGGTGTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp GGAGCTCCTACAAGTTTGGCATCCTGGTTCAGGAACTaGCCTAGCAGTCCGTGGCAGTTGTCGGAGAGACCT +
Preference number: 6 (lower is better)
Translates to: GAPTSLASWFRN*PSSPWQLSERP
Trigger: AGGTCTCTCCGACAACTGCCACGGACTGCTAGGTCAGTTCCTGAACCAGGATGCCAAACTTGTAGGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp AGGTCATTGAGAATTGTGACGAGAGCCTCCCTGGTCTaGTGGAGTTTCGCTCCCACCATGGAAGCGCTGATG +
Preference number: 6 (lower is better)
Translates to: RSLRIVTRASLV*WSFAPTMEALM
Trigger: CATCAGCGCTTCCATGGTGGGAGCGAAACTCCAGCAGACCAGGGAGGCTCTCGTCACAATTCTCAATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp TGCCTCAGCTGCTCTTTCTCTTGCTCACTGTTGCTCTaGCTCCAGGAGCTTAGCAGCTCCTTCACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: CLSCSFSCSLLL*LQELSSSFTVR
Trigger: CCTCACTGTGAAGGAGCTGCTAAGCTCCTGGAGGCAGAGCAACAGTGAGCAAGAGAAAGAGCAGCTGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp CCTTCTGCCTCAGCTGCTCTTTCTCTTGCTCACTGTTaGTCTGCCTCCAGGAGCTTAGCAGCTCCTTCACAG +
Preference number: 6 (lower is better)
Translates to: PSASAALSLAHC*SASRSLAAPSQ
Trigger: CTGTGAAGGAGCTGCTAAGCTCCTGGAGGCAGAGCAACAGTGAGCAAGAGAAAGAGCAGCTGAGGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp GCAATGTTGCCCTGGATGACCACGGTGATGTTGGCATaGGCAGACACTGACACCTCCAATCCTCGACTCCCT +
Preference number: 6 (lower is better)
Translates to: AMLPWMTTVMLA*ADTDTSNPRLP
Trigger: AGGGAGTCGAGGATTGGAGGTGTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp TCATTGAGAATTGTGACGAGAGCCTCCCTGGTCTGCTaGAGTTTCGCTCCCACCATGGAAGCGCTGATGTCA +
Preference number: 6 (lower is better)
Translates to: SLRIVTRASLVC*SFAPTMEALMS
Trigger: TGACATCAGCGCTTCCATGGTGGGAGCGAAACTCCAGCAGACCAGGGAGGCTCTCGTCACAATTCTCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp GACCCTGCTTGGTGTGATCTCCAGGTAAGATCTCTCTaGCCGGTTGATGAGGATGGTGATGGTGCGGAAGTA +
Preference number: 6 (lower is better)
Translates to: DPAWCDLQVRSL*PVDEDGDGAEV
Trigger: TACTTCCGCACCATCACCATCCTCATCAACCGGCCAGAGAGATCTTACCTGGAGATCACACCAAGCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp CCAATGATATTGAAGCGATCCTGGGGTCGGAGGTCATaGAGAATTGTGACGAGAGCCTCCCTGGTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PMILKRSWGRRS*RIVTRASLVCW
Trigger: CCAGCAGACCAGGGAGGCTCTCGTCACAATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp GTGGCTTCCTTGGTGTTGCTGAGAATCTTGAGGGTATaGGTCTCCCCAAAGGTGGGTTTCCCATCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: VASLVLLRILRV*VSPKVGFPSVR
Trigger: CCTCACCGATGGGAAACCCACCTTTGGGGAGACCAATACCCTCAAGATTCTCAGCAACACCAAGGAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp ACGTCATCGCCAATGCCAACGGTGAAGATGCAGATCTaGCCTCTGGTGGCTTCCTTGGTGTTGCTGAGAATC +
Preference number: 6 (lower is better)
Translates to: TSSPMPTVKMQI*PLVASLVLLRI
Trigger: GATTCTCAGCAACACCAAGGAAGCCACCAGAGGTCAGATCTGCATCTTCACCGTTGGCATTGGCGATGACGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp ATAAGCTCGCCATTCACAGTCACACCAGAGTTCAGATaGTCAGAGACCAGACGTAGGATGTCCCCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: ISSPFTVTPEFR*SETRRRMSPGS
Trigger: AGAGCCGGGGGACATCCTACGTCTGGTCTCTGATCATCTGAACTCTGGTGTGACTGTGAATGGCGAGCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp GCTGATTCTGGAATCTGCATCTGGAACTCAGCCTCCTaGTCTTCAGAAGCTCTGTTGAGCATCCTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ADSGICIWNSAS*SSEALLSILQD
Trigger: GTCCTGCAGGATGCTCAACAGAGCTTCTGAAGACCAGGAGGCTGAGTTCCAGATGCAGATTCCAGAATCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp ACAAAGGCAATGTTGCCCTGGATGACCACGGTGATGTaGGCATTGGCAGACACTGACACCTCCAATCCTCGA +
Preference number: 6 (lower is better)
Translates to: TKAMLPWMTTVM*ALADTDTSNPR
Trigger: TCGAGGATTGGAGGTGTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATTGCCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp TTGGAGAACCCAATGATATTGAAGCGATCCTGGGGTCGGAGGTCATaGAGAATTGTGACGAGAGCCTCCCTGGTCTGCTGGAGTTTCGCT +
Preference number: 6 (lower is better)
Translates to: LENPMILKRSWGRRS*RIVTRASLVCWSFA
Trigger: AGCGAAACTCCAGCAGACCAGGGAGGCTCTCGTCACAATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp GGTGCTGGGTTTTTGTACAGGTGGATGAGGATGACAAAGGCAATGTaGCCCTGGATGACCACGGTGATGTTGGCATTGGCAGACACTGAC +
Preference number: 6 (lower is better)
Translates to: GAGFLYRWMRMTKAM*PWMTTVMLALADTD
Trigger: GTCAGTGTCTGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATTGCCTTTGTCATCCTCATCCACCTGTACAAAAACCCAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp GTCAAACCAGCAGTCTACCTGTGCTTGCCCGTTGTAAATCTTCCTTaGTTTCCAGACCACTGGAACTCGGCGCCCTTTCACCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: VKPAVYLCLPVVNLP*FPDHWNSAPFHLQD
Trigger: ATCCTGAAGGTGAAAGGGCGCCGAGTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAAGCACAGGTAGACTGCTGGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp CAGGCCCAGTGCACTCTCTGTGTCAAACGGATGAGATaGCAGGTAGTCCTTATAGACACCGTCAATCAGCTT +
Preference number: 6 (lower is better)
Translates to: QAQCTLCVKRMR*QVVLIDTVNQL
Trigger: AAGCTGATTGACGGTGTCTATAAGGACTACCTGGCATCTCATCCGTTTGACACAGAGAGTGCACTGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp TTGCCCGTTGTAAATCTTCCTTTGTTTCCAGACCACTaGAACTCGGCGCCCTTTCACCTTCAGGATAGCCTC +
Preference number: 6 (lower is better)
Translates to: LPVVNLPLFPDH*NSAPFHLQDSL
Trigger: GAGGCTATCCTGAAGGTGAAAGGGCGCCGAGTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp AAGCCCAGGTGGTCTCTCTGGAAGGGTGCTGGGTTTTaGTACAGGTGGATGAGGATGACAAAGGCAATGTTG +
Preference number: 6 (lower is better)
Translates to: KPRWSLWKGAGF*YRWMRMTKAML
Trigger: CAACATTGCCTTTGTCATCCTCATCCACCTGTACAAAAACCCAGCACCCTTCCAGAGAGACCACCTGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp ATCCGATTGGAGAACCCAATGATATTGAAGCGATCCTaGGGTCGGAGGTCATTGAGAATTGTGACGAGAGCC +
Preference number: 6 (lower is better)
Translates to: IRLENPMILKRS*GRRSLRIVTRA
Trigger: GGCTCTCGTCACAATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp CAGCTTGGCAGCATTGTTTCTGTCAAACCAGCAGTCTACCTGTGCTaGCCCGTTGTAAATCTTCCTTTGTTTCCAGACCACTGGAACTCG +
Preference number: 6 (lower is better)
Translates to: QLGSIVSVKPAVYLC*PVVNLPLFPDHWNS
Trigger: CGAGTTCCAGTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAAGCACAGGTAGACTGCTGGTTTGACAGAAACAATGCTGCCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp CCCCGATACACGCTGTCTCCTATAAGCATGGTGAAGTaGGTGATGAAAGCTGATTCTGGAATCTGCATCTGG +
Preference number: 6 (lower is better)
Translates to: PRYTLSPISMVK*VMKADSGICIW
Trigger: CCAGATGCAGATTCCAGAATCAGCTTTCATCACCAACTTCACCATGCTTATAGGAGACAGCGTGTATCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp TTTTTGTACAGGTGGATGAGGATGACAAAGGCAATGTaGCCCTGGATGACCACGGTGATGTTGGCATTGGCA +
Preference number: 6 (lower is better)
Translates to: FLYRWMRMTKAM*PWMTTVMLALA
Trigger: TGCCAATGCCAACATCACCGTGGTCATCCAGGGCAACATTGCCTTTGTCATCCTCATCCACCTGTACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp TCAGGAGTCACTGGTAGTAAGTGGTCCTTCCACATTTTAATCCGATaGGAGAACCCAATGATATTGAAGCGATCCTGGGGTCGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SGVTGSKWSFHILIR*ENPMILKRSWGRRS
Trigger: TGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGATTAAAATGTGGAAGGACCACTTACTACCAGTGACTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp GTAATTTCACCCCGATACACGCTGTCTCCTATAAGCATGGTGAAGTaGGTGATGAAAGCTGATTCTGGAATCTGCATCTGGAACTCAGCC +
Preference number: 6 (lower is better)
Translates to: VISPRYTLSPISMVK*VMKADSGICIWNSA
Trigger: GGCTGAGTTCCAGATGCAGATTCCAGAATCAGCTTTCATCACCAACTTCACCATGCTTATAGGAGACAGCGTGTATCGGGGTGAAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp CCGAACGATGAAATCTCCCAAGATCCCATTCTGGGCAATCTTAGCTaGTTGGACCACAGTAGGCTTAAAGATGACTTTGGCAAATGTCTC +
Preference number: 6 (lower is better)
Translates to: PNDEISQDPILGNLS*LDHSRLKDDFGKCL
Trigger: GAGACATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCAGAATGGGATCTTGGGAGATTTCATCGTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp AAGTGGTCCTTCCACATTTTAATCCGATTGGAGAACCCAATGATATaGAAGCGATCCTGGGGTCGGAGGTCATTGAGAATTGTGACGAGA +
Preference number: 6 (lower is better)
Translates to: KWSFHILIRLENPMI*KRSWGRRSLRIVTR
Trigger: TCTCGTCACAATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGATTAAAATGTGGAAGGACCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS GCA 72 bp ATAGCGGGAAATGATGGTAGACTTCACCGAAAACTCTaGCATCAAGGGCTTGGTTTTCAGTCTTTGCAACAG +
Preference number: 6 (lower is better)
Translates to: IAGNDGRLHRKL*HQGLGFQSLQQ
Trigger: CTGTTGCAAAGACTGAAAACCAAGCCCTTGATGGCAGAGTTTTCGGTGAAGTCTACCATCATTTCCCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp GAAATCTCCCAAGATCCCATTCTGGGCAATCTTAGCTaGTTGGACCACAGTAGGCTTAAAGATGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: EISQDPILGNLS*LDHSRLKDDFG
Trigger: GCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCAGAATGGGATCTTGGGAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp AGCATTGTTTCTGTCAAACCAGCAGTCTACCTGTGCTaGCCCGTTGTAAATCTTCCTTTGTTTCCAGACCAC +
Preference number: 6 (lower is better)
Translates to: SIVSVKPAVYLC*PVVNLPLFPDH
Trigger: GTGGTCTGGAAACAAAGGAAGATTTACAACGGGCAAGCACAGGTAGACTGCTGGTTTGACAGAAACAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp AGGAAGAAAGCAGCTTTGTCCTTGCTGGGAATCACTAAAGACGCTTaGAACATGTCACTCCCGTTTTCTTCATTATCGTCTGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: RKKAALSLLGITKDA*NMSLPFSSLSSEVL
Trigger: CAGAACCTCAGACGATAATGAAGAAAACGGGAGTGACATGTTCAAAGCGTCTTTAGTGATTCCCAGCAAGGACAAAGCTGCTTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp TGGGCAATCTTAGCTTGTTGGACCACAGTAGGCTTAAAGATGACTTaGGCAAATGTCTCATTTTGGTTGATGAGAGTAGAAGGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: WAILACWTTVGLKMT*ANVSFWLMRVEGGG
Trigger: TCCTCCCCCTTCTACTCTCATCAACCAAAATGAGACATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS TCA 72 bp CAGCTTTGTCCTTGCTGGGAATCACTAAAGACGCTTTaGACATGTCACTCCCGTTTTCTTCATTATCGTCTG +
Preference number: 6 (lower is better)
Translates to: QLCPCWESLKTL*TCHSRFLHYRL
Trigger: CAGACGATAATGAAGAAAACGGGAGTGACATGTTCAAAGCGTCTTTAGTGATTCCCAGCAAGGACAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp TCTCCCAAGATCCCATTCTGGGCAATCTTAGCTTGTTaGACCACAGTAGGCTTAAAGATGACTTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: SPKIPFWAILAC*TTVGLKMTLAN
Trigger: ATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCAGAATGGGATCTTGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CCA 72 bp CCATTCCTAATGTTGTCAGGAGTCACTGGTAGTAAGTaGTCCTTCCACATTTTAATCCGATTGGAGAACCCA +
Preference number: 6 (lower is better)
Translates to: PFLMLSGVTGSK*SFHILIRLENP
Trigger: TGGGTTCTCCAATCGGATTAAAATGTGGAAGGACCACTTACTACCAGTGACTCCTGACAACATTAGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp AGTAGGCTTAAAGATGACTTTGGCAAATGTCTCATTTaGGTTGATGAGAGTAGAAGGGGGAGGACCCACATC +
Preference number: 6 (lower is better)
Translates to: SRLKDDFGKCLI*VDESRRGRTHI
Trigger: GATGTGGGTCCTCCCCCTTCTACTCTCATCAACCAAAATGAGACATTTGCCAAAGTCATCTTTAAGCCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp ACTGGTAGTAAGTGGTCCTTCCACATTTTAATCCGATaGGAGAACCCAATGATATTGAAGCGATCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: TGSKWSFHILIR*ENPMILKRSWG
Trigger: ACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGATTAAAATGTGGAAGGACCACTTACTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp TTCCACATTTTAATCCGATTGGAGAACCCAATGATATaGAAGCGATCCTGGGGTCGGAGGTCATTGAGAATT +
Preference number: 6 (lower is better)
Translates to: FHILIRLENPMI*KRSWGRRSLRI
Trigger: AATTCTCAATGACCTCCGACCCCAGGATCGCTTCAATATCATTGGGTTCTCCAATCGGATTAAAATGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 90 bp AACGATGAAATCTCCCAAGATCCCATTCTGGGCAATCTTAGCTTGTaGGACCACAGTAGGCTTAAAGATGACTTTGGCAAATGTCTCATT +
Preference number: 6 (lower is better)
Translates to: NDEISQDPILGNLSL*DHSRLKDDFGKCLI
Trigger: AATGAGACATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAAGATTGCCCAGAATGGGATCTTGGGAGATTTCATCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8
CDS CAA 72 bp TTAGCTTGTTGGACCACAGTAGGCTTAAAGATGACTTaGGCAAATGTCTCATTTTGGTTGATGAGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: LACWTTVGLKMT*ANVSFWLMRVE
Trigger: TTCTACTCTCATCAACCAAAATGAGACATTTGCCAAAGTCATCTTTAAGCCTACTGTGGTCCAACAAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026886.8