Pregenerated sensors for ITIH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037254Ensembl transcript IDs: ENSMUST00000042290.14, ENSMUST00000155809.9, ENSMUST00000161909.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGAAACGGGGGAGTAACTaGAAAAAGTATCAAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GLAGLLGHYNICVYFELLKRGSN*KKYQGR Trigger: TCTCCCTTGATACTTTTTGCAGTTACTCCCCCGTTT...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTAGATGGGTTGGCCCATaGTGGGATGGGACCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFRWVGP*WDGTRG Trigger: GCCTCGGGTCCCATCCCATCATGGGCCAACCCATCT...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGCAGGAGTGGTCCTGTaGCGGGGAGTCAGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLAGVVL*RGVSQH Trigger: ATGCTGGCTGACTCCCCGCCACAGGACCACTCCTGC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTCCCATCCAGCCGTCTTaGCCTTTGCTCTTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFPIQPS*PLLLPV Trigger: CACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGG...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGCAGCTCCCCGTTCACTaGAGTCTCTGTGCAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLQLPVH*SLCAVG Trigger: CCCAACTGCACAGAGACTGCAGTGAACGGGGAGCTG...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGAAGAAACAGCCAGATaGGAAGGCACACAGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLEETAR*EGTQAA Trigger: AGCGGCCTGTGTGCCTTCTCATCTGGCTGTTTCTTC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGACCCGAGGCAACCTTaGTGCCATAATACAGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVDPRQP*CHNTVR Trigger: GCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCTTTGCTCTTGCCTGTaGATAAAGAGCTCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLCSCL*IKSSAH Trigger: GTGGGCCGAGCTCTTTATTCACAGGCAAGAGCAAAG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGAGCGGAGTCACGATGTaGTGGTCTAGAGACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLSGVTM*WSRDIC Trigger: GCAGATGTCTCTAGACCATCACATCGTGACTCCGCT...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTCCGGGTCTCTCATTaGAGATGTGGATGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVFRVSH*RCGWLA Trigger: AGCCAGCCATCCACATCTTCAATGAGAGACCCGGAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGGGAGTCAGCCAGCATaGGTTCATCTCCAGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFGSQPA*VHLQHH Trigger: ATGATGCTGGAGATGAACGCATGCTGGCTGACTCCC...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTTCCACGTTAACTGGGTaGTTCCTCCACACACGATGC | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFSTLTG*FLHTRC Trigger: GCATCGTGTGTGGAGGAAGCACCCAGTTAACGTGGA...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTTGGATGGCTGGCTCCTaGATGAACTGGCCTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFWMAGS*MNWPNS Trigger: ACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCA...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGTTCAAACTGCACCTTaGCTCCAGGCGGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVVQTAP*LQAGCS Trigger: TGAACATCCCGCCTGGAGCCAAGGTGCAGTTTGAAC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGCTCCTTTGGGAATCTaGACATCGAACACGACACTC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVAPLGI*TSNTTL Trigger: GAGTGTCGTGTTCGATGTTCAGATTCCCAAAGGAGC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGTGCTACTGTGGGCTTaGAGGATACATGTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVVLLWA*RIHVPS Trigger: AGAAGGCACATGTATCCTTCAAGCCCACAGTAGCAC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTCACCAGTTTGCTCTaGATGGTAGTTGTGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVFTSLL*MVVVAT Trigger: GGTGGCCACAACTACCATCCAGAGCAAACTGGTGAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGCCGTGATGATGCTCTaGACTTCTGTCAGTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLAVMML*TSVSLL Trigger: CAGCAAACTGACAGAAGTCCAGAGCATCATCACGGC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTCCAAGTCATCCATCTaGCTCAGGGTTTCCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVSKSSI*LRVSKT Trigger: GGTCTTGGAAACCCTGAGCCAGATGGATGACTTGGA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCTCTCATTGAAGATGTaGATGGCTGGCTCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLSLKM*MAGSCM Trigger: CATGCAGGAGCCAGCCATCCACATCTTCAATGAGAG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTGCATGCTTGTCCTTTaGCAGAAACTCCTCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVCMLVL*QKLLQV Trigger: GACTTGGAGGAGTTTCTGTCAAAGGACAAGCATGCA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAACTCGAGTTTCCAAGATaGGCTGTGTCGGACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKLEFPR*AVSDQD Trigger: GTCCTGGTCCGACACAGCTCATCTTGGAAACTCGAG...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTCCTCCACACACGATaGAGCAGAACGGAAAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVFLHTR*SRTEKN Trigger: GTTCTTTTCCGTTCTGCTGCATCGTGTGTGGAGGAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTATGACAGGGACGCCTTaGAAATGGCCTTCAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFMTGTP*KWPSNV Trigger: CACATTTGAAGGCCATTTCCAAGGCGTCCCTGTCAT...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGTGCCTCCACTAGGCTaGATTTTCTCAATGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVVPPLG*IFSMYL Trigger: GAGATACATTGAGAAAATTCAGCCTAGTGGAGGCAC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAATTGGCGCCGATAAGCTaGCCGTTGACTACAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKLAPIS*PLTTIP Trigger: AGGGATTGTAGTCAACGGTCAGCTTATCGGCGCCAA...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTCACTGCAGTCTCTGTaGAGTTGGGGCATTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVSLQSL*SWGIFF Trigger: AAAGAAAATGCCCCAACTGCACAGAGACTGCAGTGA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGGACTTCTGTCAGTTTaGTGGGATCAAATTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFGLLSV*WDQISL Trigger: CAGGGAAATTTGATCCCAGCAAACTGACAGAAGTCC...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTAAGTCAGGGTCTGCATaGTTGTCCTTTGACAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVKSGSA*LSFDRN Trigger: GTTTCTGTCAAAGGACAAGCATGCAGACCCTGACTT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGCTATAAAGAGTCACTaGATCAACAGTGTCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLAIKSH*INSVRL Trigger: GAGACGGACACTGTTGATCCAGTGACTCTTTATAGC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGACACTCTGAGGCAATaGGGAATTGTTCACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLDTLRQ*GIVHQF Trigger: AAACTGGTGAACAATTCCCCATTGCCTCAGAGTGTC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCAGTCTCTGTGCAGTTaGGGCATTTTCTTTGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVQSLCS*GIFFVV Trigger: CACAACAAAGAAAATGCCCCAACTGCACAGAGACTG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTCAAAAAGGATGTTCTTaGGGATTGGGTCCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFQKGCS*GLGPGS Trigger: AGAACCTGGACCCAATCCCCAAGAACATCCTTTTTG...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCTTCTGTCAGTTTGCTaGGATCAAATTTCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLLSVC*DQISLP Trigger: TGGCAGGGAAATTTGATCCCAGCAAACTGACAGAAG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGTGAGAACTTGTCTATaGGGGGAGCGTAGATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKVRTCL*GERRSP Trigger: TGGGGATCTACGCTCCCCCCATAGACAAGTTCTCAC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGGTTGTAAAATTTCTTaGGCTGAGAGGATGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVGCKIS*AERMCP Trigger: AGGACACATCCTCTCAGCTCAAGAAATTTTACAACC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGGAAATTGTTTTGGGTaGCATCTGTTACTGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFGNCFG*HLLLMP Trigger: AGGCATCAGTAACAGATGTCACCCAAAACAATTTCC...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGTTGACTACAATCCCTaGTTCTGGGTCAGACACCAG | + |
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Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKVDYNP*FWVRHQ Trigger: CTGGTGTCTGACCCAGAATCAGGGATTGTAGTCAAC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGCATTTTCTTTGTTGTaGTACTGTGGGCTTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLAFSLL*YCGLEG Trigger: TCCTTCAAGCCCACAGTAGCACAACAAAGAAAATGC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGGGACGCCTTGGAAATaGCCTTCAAATGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKGTPWK*PSNVSG Trigger: TCCTGACACATTTGAAGGCCATTTCCAAGGCGTCCC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTAATGTGTCAGGAACATaGAGAAATCTCATTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVNVSGT*RNLIPW Trigger: CCAAGGAATGAGATTTCTTCATGTTCCTGACACATT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGTGGCTTCATTCAAAATaGAAATTGCTCGAAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLWLHSK*KLLEAV Trigger: CACTGCTTCGAGCAATTTTCATTTTGAATGAAGCCA...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGCTCTTTATTCAGGGTaGGAGTCACAGATTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFALYSG*ESQIFL Trigger: AAGAAAAATCTGTGACTCTCACCCTGAATAAAGAGC...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTTATAATGTCCATCGATaGAACCTTTCCCACTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFYNVHR*NLSHCC Trigger: ACAACAGTGGGAAAGGTTTCATCGATGGACATTATA...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCTTGAAGGATACATGTaGCTTCTGTTGTCCTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLEGYM*LLLSFR Trigger: TCTAAAGGACAACAGAAGGCACATGTATCCTTCAAG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTATTCAAATGAGTAGGTaGAGTAGACTCAAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVIQMSR*SRLKWL Trigger: AAGCCACTTGAGTCTACTCCACCTACTCATTTGAAT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR TCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAACCTTCTCTTCTCTGTTaGCATCATACATCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKPSLLC*HHTSPP Trigger: TGGTGGTGATGTATGATGTCAACAGAGAAGAGAAGG...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTGTCTTCCATTCTCTTaGACAAATGGGAGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFFSGGLAGLLGHYNICVCLPFS*TNGSLS Trigger: AGATAAACTCCCATTTGTGCAAGAGAATGGAAGACA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGTATCTCTTGGCATCTaGAATTTGTGTTTTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLVSLGI*NLCFSS Trigger: GCTACTAAAACACAAATTGCAGATGCCAAGAGATAC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAAAATGGGAGTTTATCTaGGGCCAGTTCCACAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKKWEFI*GQFHKI Trigger: GATCTTGTGGAACTGGCCCCAGATAAACTCCCATTT...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGTCTCAATGTATCTCTTaGCATCTGCAATTTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLAGLLGHYNICVYFELLSQCIS*HLQFVF Trigger: AAACACAAATTGCAGATGCCAAGAGATACATTGAGA...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAAACATTTCTGAGCAGTaGAGTAGAGACCTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKNISEQ*SRDLVV Trigger: TACAACCAGGTCTCTACTCCACTGCTCAGAAATGTT...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTTTGTGGAAATTGTTTTaGGTGACATCTGTTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGGLAGLLGHYNICVYFLWKLF*VTSVTD Trigger: ATCAGTAACAGATGTCACCCAAAACAATTTCCACAA...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAATGGTCTAGAGACATCTaGAGGATTGTTTTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKWSRDI*RIVLVI Trigger: AATCACCAAAACAATCCTGCAGATGTCTCTAGACCA...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAACAGGTTCGAACATTATaGTTGAAATCAACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKQVRTL*LKSTTE Trigger: CTCTGTGGTTGATTTCAACCATAATGTTCGAACCTG...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAATTCAAAATGAAAATTaGTCGAAGCAGTGCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKIQNEN*SKQCLV Trigger: AACGAGGCACTGCTTCGAGCAATTTTCATTTTGAAT...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR GCA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAAGATGTTATCTTGGATaGTCTGCTTCACATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKRCYLG*SASHFS Trigger: AGAAAAATGTGAAGCAGAGCATCCAAGATAACATCT...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | TGGGATGGGACCCGAGGCAACCTTGGTGCCATAATACAGTGCGCCTaGGCAGCAGGAGTGGTCCTGTGGCGGGGAGTCAGCCAGCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: WDGTRGNLGAIIQCA*AAGVVLWRGVSQHA Trigger: CGCATGCTGGCTGACTCCCCGCCACAGGACCACTCCTGCTGCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS GCA 90 bp | GAGATGGGTTGGCCCATGATGGGATGGGACCCGAGGCAACCTTGGTaGCATAATACAGTGCGCCTGAGCAGCAGGAGTGGTCCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EMGWPMMGWDPRQPW*HNTVRLSSRSGPVA Trigger: CGCCACAGGACCACTCCTGCTGCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACCCATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | TCGGAGATGGGTTGGCCCATGATGGGATGGGACCCGAGGCAACCTTaGTGCCATAATACAGTGCGCCTGAGCAGCAGGAGTGGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SEMGWPMMGWDPRQP*CHNTVRLSSRSGPV Trigger: CACAGGACCACTCCTGCTGCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACCCATCTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | GCATGGCCGACATTGGTGTCGGAGATGGGTTGGCCCATGATGGGATaGGACCCGAGGCAACCTTGGTGCCATAATACAGTGCGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AWPTLVSEMGWPMMG*DPRQPWCHNTVRLS Trigger: GCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACCCATCTCCGACACCAATGTCGGCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | GCCTCGGGTTTTCCCGGCTCCTTTCCGGGTCTCTCATTGAAGATGTaGATGGCTGGCTCCTGCATGAACTGGCCTAACAGTCCATGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ASGFPGSFPGLSLKM*MAGSCMNWPNSPCT Trigger: AGTGCATGGACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCACATCTTCAATGAGAGACCCGGAAAGGAGCCGGGAAAACCCGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | GTTCAAACTGCACCTTGGCTCCAGGCGGGATGTTCACCTCTGTGTTaGAGTTCTCCATATCCAGAGTTCTGCTCCTTACCCATCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQTAPWLQAGCSPLC*SSPYPEFCSLPIQP Trigger: CGGCTGGATGGGTAAGGAGCAGAACTCTGGATATGGAGAACTTCAACACAGAGGTGAACATCCCGCCTGGAGCCAAGGTGCAGTTTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS GCA 90 bp | GGCTCCTTTCCGGGTCTCTCATTGAAGATGTGGATGGCTGGCTCCTaGATGAACTGGCCTAACAGTCCATGCACTCTAGGTGAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSFPGLSLKMWMAGS*MNWPNSPCTLGENL Trigger: CAAGTTCTCACCTAGAGTGCATGGACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCACATCTTCAATGAGAGACCCGGAAAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | CCGGGTCTCTCATTGAAGATGTGGATGGCTGGCTCCTGCATGAACTaGCCTAACAGTCCATGCACTCTAGGTGAGAACTTGTCTATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLSLKMWMAGSCMN*PNSPCTLGENLSMG Trigger: CCCCATAGACAAGTTCTCACCTAGAGTGCATGGACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCACATCTTCAATGAGAGACCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | GGCCCACAGCTTCTTGGTGAAGTCAGGGTCTGCATGCTTGTCCTTTaGCAGAAACTCCTCCAAGTCATCCATCTGGCTCAGGGTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPQLLGEVRVCMLVL*QKLLQVIHLAQGFQ Trigger: TTGGAAACCCTGAGCCAGATGGATGACTTGGAGGAGTTTCTGTCAAAGGACAAGCATGCAGACCCTGACTTCACCAAGAAGCTGTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | TCAACAGTGTCCGTCTCCTCTCCGGATTCCTCAGGAAGGCTTCTCTaGTGTCTTCCATTCTCTTGCACAAATGGGAGTTTATCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STVSVSSPDSSGRLL*CLPFSCTNGSLSGA Trigger: GGCCCCAGATAAACTCCCATTTGTGCAAGAGAATGGAAGACATCAGAGAAGCCTTCCTGAGGAATCCGGAGAGGAGACGGACACTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS GCA 90 bp | AGTTCTCCATATCCAGAGTTCTGCTCCTTACCCATCCAGCCGTCTTaGCCTTTGCTCTTGCCTGTGAATAAAGAGCTCGGCCCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPYPEFCSLPIQPS*PLLLPVNKELGPQF Trigger: AAACTGTGGGCCGAGCTCTTTATTCACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGGTAAGGAGCAGAACTCTGGATATGGAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS TCA 90 bp | GATTTTTCTTTCTTCACAGAGATGAGCACCCTCGAGTTTCCAAGATaGGCTGTGTCGGACCAGGACAGTCGAGATGTAGAGGAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DFSFFTEMSTLEFPR*AVSDQDSRDVEEPE Trigger: CTCTGGCTCCTCTACATCTCGACTGTCCTGGTCCGACACAGCTCATCTTGGAAACTCGAGGGTGCTCATCTCTGTGAAGAAAGAAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | GTCATTTTCCACTTGATTCAAATGAGTAGGTGGAGTAGACTCAAGTaGCTTCGCTCCGACTGCAAGCATGGCCGACATTGGTGTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VIFHLIQMSRWSRLK*LRSDCKHGRHWCRR Trigger: TCTCCGACACCAATGTCGGCCATGCTTGCAGTCGGAGCGAAGCCACTTGAGTCTACTCCACCTACTCATTTGAATCAAGTGGAAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTCACCTCCAAGTGTTaGGCCAGCTTCCCGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVFTSKC*ASFPGC Trigger: GCAGCCCGGGAAGCTGGCCAAACACTTGGAGGTGAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | TTTCTCCCATGGCAGCTACGGTTGGATCTCCATCAGAAACCAAAATaGTCAGAGAGACTGAGTCGGGGTTCAGCAATCCCATGTTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPWQLRLDLHQKPK*SERLSRGSAIPCYW Trigger: CCAGTAACATGGGATTGCTGAACCCCGACTCAGTCTCTCTGATCATTTTGGTTTCTGATGGAGATCCAACCGTAGCTGCCATGGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155809.9 |
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| CDS GCA 90 bp | CCCGTTCACTGCAGTCTCTGTGCAGTTGGGGCATTTTCTTTGTTGTaGTACTGTGGGCTTGAAGGATACATGTGCCTTCTGTTGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVHCSLCAVGAFSLL*YCGLEGYMCLLLSF Trigger: AAAGGACAACAGAAGGCACATGTATCCTTCAAGCCCACAGTAGCACAACAAAGAAAATGCCCCAACTGCACAGAGACTGCAGTGAACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS GCA 90 bp | CATCTGGCTCAGGGTTTCCAAGACCAATTCTGTGTTAGCCGAAGTTaGCGTGATGATGCTCTGGACTTCTGTCAGTTTGCTGGGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLAQGFQDQFCVSRS*RDDALDFCQFAGIK Trigger: TTTGATCCCAGCAAACTGACAGAAGTCCAGAGCATCATCACGGCAACTTCGGCTAACACAGAATTGGTCTTGGAAACCCTGAGCCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | CCGAGAAGTAATAGTGGACTGGACTTTGTAGCTATAAAGAGTCACTaGATCAACAGTGTCCGTCTCCTCTCCGGATTCCTCAGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSNSGLDFVAIKSH*INSVRLLSGFLRKA Trigger: AGCCTTCCTGAGGAATCCGGAGAGGAGACGGACACTGTTGATCCAGTGACTCTTTATAGCTACAAAGTCCAGTCCACTATTACTTCTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS CCA 90 bp | AATGATGAAGTGGGGGTCATTTTCCACTTGATTCAAATGAGTAGGTaGAGTAGACTCAAGTGGCTTCGCTCCGACTGCAAGCATGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NDEVGVIFHLIQMSR*SRLKWLRSDCKHGR Trigger: TCGGCCATGCTTGCAGTCGGAGCGAAGCCACTTGAGTCTACTCCACCTACTCATTTGAATCAAGTGGAAAATGACCCCCACTTCATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTACCCATCCAGCCGTCTaGCCCTTTGCTCTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVTHPAV*PFALAC Trigger: ACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGGT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS GCA 90 bp | GATGATGCTCTGGACTTCTGTCAGTTTGCTGGGATCAAATTTCCCTaGCACCACGATCTCAGAACCTCCGAAGTAGTTGTGGAAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DDALDFCQFAGIKFP*HHDLRTSEVVVEIV Trigger: AACAATTTCCACAACTACTTCGGAGGTTCTGAGATCGTGGTGGCAGGGAAATTTGATCCCAGCAAACTGACAGAAGTCCAGAGCATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 90 bp | TTCCTCAGGAAGGCTTCTCTGATGTCTTCCATTCTCTTGCACAAATaGGAGTTTATCTGGGGCCAGTTCCACAAGATCACTGTATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLRKASLMSSILLHK*EFIWGQFHKITVFC Trigger: GCAGAATACAGTGATCTTGTGGAACTGGCCCCAGATAAACTCCCATTTGTGCAAGAGAATGGAAGACATCAGAGAAGCCTTCCTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTCGAAGCAGTGCCTCGTaGATATTCGTGCCTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FSGGLAGLLGHYNICVYFRSSAS*IFVPPL Trigger: TAGTGGAGGCACGAATATCAACGAGGCACTGCTTCG...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | CCAGCATCATTCTCTATCACCATGGCAGTAAGCGGAGTCACGATGTaGTGGTCTAGAGACATCTGCAGGATTGTTTTGGTGATTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PASFSITMAVSGVTM*WSRDICRIVLVIFL Trigger: AAGGAAAATCACCAAAACAATCCTGCAGATGTCTCTAGACCATCACATCGTGACTCCGCTTACTGCCATGGTGATAGAGAATGATGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS TCA 90 bp | TTTATCTGGGGCCAGTTCCACAAGATCACTGTATTCTGCAAATTCTaGGTTTCCGTTTATGGGGATTTCGAAGGCTTGTGCTTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FIWGQFHKITVFCKF*VSVYGDFEGLCFQK Trigger: CTTCTGGAAGCACAAGCCTTCGAAATCCCCATAAACGGAAACTCAGAATTTGCAGAATACAGTGATCTTGTGGAACTGGCCCCAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS TCA 90 bp | AGCTGTAGAGCTGAGGCACAAAATAATCCTTATAATGTCCATCGATaGAACCTTTCCCACTGTTGTGTACAAACCAGCAGGGAACGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRAEAQNNPYNVHR*NLSHCCVQTSRERL Trigger: CAGACGTTCCCTGCTGGTTTGTACACAACAGTGGGAAAGGTTTCATCGATGGACATTATAAGGATTATTTTGTGCCTCAGCTCTACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGTATGACAGGGACGCCTaGGAAATGGCCTTCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGLLGHYNICVYFELLYDRDA*EMAFKC Trigger: ACATTTGAAGGCCATTTCCAAGGCGTCCCTGTCATA...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGGATGTTCTTGGGGATaGGGTCCAGGTTCTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKGCSWG*GPGSQE Trigger: CTCCTGAGAACCTGGACCCAATCCCCAAGAACATCC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTACAAAAAGGATGTTCTaGGGGATTGGGTCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVTKRMF*GIGSRF Trigger: GAACCTGGACCCAATCCCCAAGAACATCCTTTTTGT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGTTAGTTCCCCTACGGTaGGATCTCCATCAGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GLAGLLGHYNICVYFELLLVPLR*DLHQKP Trigger: TGGTTTCTGATGGAGATCCAACCGTAGGGGAACTAA...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTCTGCATGCTTGTCCTTaGACAGAAACTCCTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSGGLAGLLGHYNICVYFLHACP*TETPPS Trigger: ACTTGGAGGAGTTTCTGTCAAAGGACAAGCATGCAG...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTGGTGATTTTCCTTTaGATGGCAGCAGTAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLVIFL*MAAVGA Trigger: GGCTCCTACTGCTGCCATCAAAAGGAAAATCACCAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTAAACCTTTCCCACTGTaGTGTACAAACCAGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSGGLAGLLGHYNICVYFKPFPL*CTNQQG Trigger: TCCCTGCTGGTTTGTACACAACAGTGGGAAAGGTTT...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS-3UTR CAA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTACAGTCATGGTGAAGTaGGAGATAAAGGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSGGLAGLLGHYNICVYFTVMVK*EIKAPL Trigger: CAAAGGAGCCTTTATCTCCAACTTCACCATGACTGT...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGTGGACTTCTGTCAGTTaGCTGGGATCAAATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGLLGHYNICVYFELLWTSVS*LGSNFP Trigger: AGGGAAATTTGATCCCAGCAAACTGACAGAAGTCCA...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTGGGGTCATTTTCCACTaGATTCAAATGAGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVGVIFH*IQMSRW Trigger: CCACCTACTCATTTGAATCAAGTGGAAAATGACCCC...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAATTTCCGGGTCTCTCATaGAAGATGTGGATGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKFPGLS*KMWMAG Trigger: GCCAGCCATCCACATCTTCAATGAGAGACCCGGAAA...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS TCA 90 bp | ATTGCTCGAAGCAGTGCCTCGTTGATATTCGTGCCTCCACTAGGCTaGATTTTCTCAATGTATCTCTTGGCATCTGCAATTTGTGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: IARSSASLIFVPPLG*IFSMYLLASAICVL Trigger: TAAAACACAAATTGCAGATGCCAAGAGATACATTGAGAAAATTCAGCCTAGTGGAGGCACGAATATCAACGAGGCACTGCTTCGAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS CCA 90 bp | TTTCTCCAGGTTCGAACATTATGGTTGAAATCAACCACAGAGAATTaGTCGTCTGTTCTTAGGTCATCCAATATCGTCTTCATTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLQVRTLWLKSTTEN*SSVLRSSNIVFIAS Trigger: GGAGGCAATGAAGACGATATTGGATGACCTAAGAACAGACGACCAATTCTCTGTGGTTGATTTCAACCATAATGTTCGAACCTGGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGGGGATTTCGAAGGCTaGTGCTTCCAGAAGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKGDFEG*CFQKKQ Trigger: CTGTTTCTTCTGGAAGCACAAGCCTTCGAAATCCCC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAACAGCCGTCTTGCCCTTaGCTCTTGCCTGTGAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKQPSCP*LLPVNK Trigger: TTTATTCACAGGCAAGAGCAAAGGGCAAGACGGCTG...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTATGTTCACCTCTGTGTaGAAGTTCTCCATATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVMFTSV*KFSISR Trigger: TCTGGATATGGAGAACTTCAACACAGAGGTGAACAT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTAAGAAATCTCATTCCTaGGGGTTCGATAATCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVKKSHS*GFDNPH Trigger: GTGTGGATTATCGAACCCCAAGGAATGAGATTTCTT...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTTACATGTGCCTTCTGTaGTCCTTTAGATATGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSGGLAGLLGHYNICVYFYMCLL*SFRYDR Trigger: CCTGTCATATCTAAAGGACAACAGAAGGCACATGTA...AAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGATGTCTTCCATTCTCTaGCACAAATGGGAGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GLAGLLGHYNICVYFELLMSSIL*HKWEFI Trigger: GATAAACTCCCATTTGTGCAAGAGAATGGAAGACAT...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGGGGCATTTTCTTTGTaGTGCTACTGTGGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKGAFSL*CYCGLE Trigger: TTCAAGCCCACAGTAGCACAACAAAGAAAATGCCCC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGCAGTCTCTGTGCAGTaGGGGCATTTTCTTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKAVSVQ*GHFLCC Trigger: ACAACAAAGAAAATGCCCCAACTGCACAGAGACTGC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGCCTTCTCTTCTCTGTaGACATCATACATCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKAFSSL*TSYITT Trigger: GGTGGTGATGTATGATGTCAACAGAGAAGAGAAGGC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTCTTCATGCCTTCCTTTaGGAAATAAAACCCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVLHAFL*EIKPQF Trigger: AAACTGGGGTTTTATTTCCAAAAGGAAGGCATGAAG...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAGAATTGTTCACCAGTTaGCTCTGGATGGTAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKELFTS*LWMVVV Trigger: CACAACTACCATCCAGAGCAAACTGGTGAACAATTC...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTATTTTGAGTTGCTGGTTCGAACATTATGGTaGAAATCAACCACAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGLLGHYNICVYFELLVRTLW*KSTTEN Trigger: ATTCTCTGTGGTTGATTTCAACCATAATGTTCGAAC...CAGCAACTCAAAATAAACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTCTCCGGTGGGTTAGCAGGCCTTTTAGGCCACTATAATATCTGCGTTTTCTCAATGTATCTCTaGGCATCTGCAATTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFFSGGLAGLLGHYNICVFSMYL*ASAICV Trigger: AACACAAATTGCAGATGCCAAGAGATACATTGAGAA...AACGCAGATATTATAGTGGCCTAAAAGGCCTGCTAACCCACCGGAGAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACTGCAAAAAGTATCAAGGGAGAAAAGGATACACATACAGTTTCCAAAATCTGCAGGATTGTTTaGGTGATTTTCCTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GVTAKSIKGEKDTHTVSKICRIV*VIFLLM Trigger: CATCAAAAGGAAAATCACCAAAACAATCCTGCAGAT...TTTGGAAACTGTATGTGTATCCTTTTCTCCCTTGATACTTTTTGCAGTTACTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS TCA 72 bp | ACCCGAGGCAACCTTGGTGCCATAATACAGTGCGCCTaGGCAGCAGGAGTGGTCCTGTGGCGGGGAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRGNLGAIIQCA*AAGVVLWRGVS Trigger: GCTGACTCCCCGCCACAGGACCACTCCTGCTGCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS TCA 72 bp | CATGGCCGACATTGGTGTCGGAGATGGGTTGGCCCATaGTGGGATGGGACCCGAGGCAACCTTGGTGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: HGRHWCRRWVGP*WDGTRGNLGAI Trigger: TATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACCCATCTCCGACACCAATGTCGGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | GGTTGGCCCATGATGGGATGGGACCCGAGGCAACCTTaGTGCCATAATACAGTGCGCCTGAGCAGCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GWPMMGWDPRQP*CHNTVRLSSRS Trigger: ACTCCTGCTGCTCAGGCGCACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS GCA 72 bp | AGCAGGAGTGGTCCTGTGGCGGGGAGTCAGCCAGCATaGGTTCATCTCCAGCATCATTCTCTATCACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSGPVAGSQPA*VHLQHHSLSPW Trigger: CCATGGTGATAGAGAATGATGCTGGAGATGAACGCATGCTGGCTGACTCCCCGCCACAGGACCACTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS GCA 72 bp | GGTGACAGTCAGCTTATGTCCTTTCACCTCCATGCTTaGCTCGGGTTTTCCCGGCTCCTTTCCGGGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GDSQLMSFHLHA*LGFSRLLSGSL Trigger: GAGAGACCCGGAAAGGAGCCGGGAAAACCCGAGGCAAGCATGGAGGTGAAAGGACATAAGCTGACTGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS GCA 72 bp | AGTAGGTGGAGTAGACTCAAGTGGCTTCGCTCCGACTaGAAGCATGGCCGACATTGGTGTCGGAGATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRWSRLKWLRSD*KHGRHWCRRWV Trigger: AACCCATCTCCGACACCAATGTCGGCCATGCTTGCAGTCGGAGCGAAGCCACTTGAGTCTACTCCACCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | ACATTGGTGTCGGAGATGGGTTGGCCCATGATGGGATaGGACCCGAGGCAACCTTGGTGCCATAATACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLVSEMGWPMMG*DPRQPWCHNTV Trigger: CACTGTATTATGGCACCAAGGTTGCCTCGGGTCCCATCCCATCATGGGCCAACCCATCTCCGACACCAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CAA 72 bp | GAGTTCTGCTCCTTACCCATCCAGCCGTCTTGCCCTTaGCTCTTGCCTGTGAATAAAGAGCTCGGCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: EFCSLPIQPSCP*LLPVNKELGPQ Trigger: CTGTGGGCCGAGCTCTTTATTCACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGGTAAGGAGCAGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS TCA 72 bp | GCACCTTGGCTCCAGGCGGGATGTTCACCTCTGTGTTaGAGTTCTCCATATCCAGAGTTCTGCTCCTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: APWLQAGCSPLC*SSPYPEFCSLP Trigger: GGGTAAGGAGCAGAACTCTGGATATGGAGAACTTCAACACAGAGGTGAACATCCCGCCTGGAGCCAAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS GCA 72 bp | CCGGGTCTCTCATTGAAGATGTGGATGGCTGGCTCCTaGATGAACTGGCCTAACAGTCCATGCACTCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGLSLKMWMAGS*MNWPNSPCTLG Trigger: ACCTAGAGTGCATGGACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCACATCTTCAATGAGAGACCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS TCA 72 bp | AGCTTTCCATTCTCTGCCCTCTTGGCGCCGATAAGCTaGCCGTTGACTACAATCCCTGATTCTGGGTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFPFSALLAPIS*PLTTIPDSGSD Trigger: GTCTGACCCAGAATCAGGGATTGTAGTCAACGGTCAGCTTATCGGCGCCAAGAGGGCAGAGAATGGAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS GCA 72 bp | TATCCAGAGTTCTGCTCCTTACCCATCCAGCCGTCTTaGCCTTTGCTCTTGCCTGTGAATAAAGAGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPEFCSLPIQPS*PLLLPVNKELG Trigger: GCCGAGCTCTTTATTCACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGGTAAGGAGCAGAACTCTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS CAA 90 bp | CCATATCCAGAGTTCTGCTCCTTACCCATCCAGCCGTCTTGCCCTTaGCTCTTGCCTGTGAATAAAGAGCTCGGCCCACAGTTTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PYPEFCSLPIQPSCP*LLPVNKELGPQFSL Trigger: AAGAGAAAACTGTGGGCCGAGCTCTTTATTCACAGGCAAGAGCAAAGGGCAAGACGGCTGGATGGGTAAGGAGCAGAACTCTGGATATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS TCA 72 bp | CTTCTTGGTGAAGTCAGGGTCTGCATGCTTGTCCTTTaGCAGAAACTCCTCCAAGTCATCCATCTGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGEVRVCMLVL*QKLLQVIHLAQ Trigger: CTGAGCCAGATGGATGACTTGGAGGAGTTTCTGTCAAAGGACAAGCATGCAGACCCTGACTTCACCAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | GTGGGGGTCATTTTCCACTTGATTCAAATGAGTAGGTaGAGTAGACTCAAGTGGCTTCGCTCCGACTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VGVIFHLIQMSR*SRLKWLRSDCK Trigger: CTTGCAGTCGGAGCGAAGCCACTTGAGTCTACTCCACCTACTCATTTGAATCAAGTGGAAAATGACCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | TCATTGAAGATGTGGATGGCTGGCTCCTGCATGAACTaGCCTAACAGTCCATGCACTCTAGGTGAGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKMWMAGSCMN*PNSPCTLGENL Trigger: CAAGTTCTCACCTAGAGTGCATGGACTGTTAGGCCAGTTCATGCAGGAGCCAGCCATCCACATCTTCAATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CAA 72 bp | TTAAACACCTCAAGTTCCCCGGCCTTCTCTTCTCTGTaGACATCATACATCACCACCAGCTCCCCGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LNTSSSPAFSSL*TSYITTSSPFT Trigger: AGTGAACGGGGAGCTGGTGGTGATGTATGATGTCAACAGAGAAGAGAAGGCCGGGGAACTTGAGGTGTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS CAA 90 bp | CTCTCCGGATTCCTCAGGAAGGCTTCTCTGATGTCTTCCATTCTCTaGCACAAATGGGAGTTTATCTGGGGCCAGTTCCACAAGATCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSGFLRKASLMSSIL*HKWEFIWGQFHKIT Trigger: AGTGATCTTGTGGAACTGGCCCCAGATAAACTCCCATTTGTGCAAGAGAATGGAAGACATCAGAGAAGCCTTCCTGAGGAATCCGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS GCA 72 bp | TGCAGTCTCTGTGCAGTTGGGGCATTTTCTTTGTTGTaGTACTGTGGGCTTGAAGGATACATGTGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSLCAVGAFSLL*YCGLEGYMCLL Trigger: CAGAAGGCACATGTATCCTTCAAGCCCACAGTAGCACAACAAAGAAAATGCCCCAACTGCACAGAGACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS CAA 72 bp | TTCCTCAGGAAGGCTTCTCTGATGTCTTCCATTCTCTaGCACAAATGGGAGTTTATCTGGGGCCAGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLRKASLMSSIL*HKWEFIWGQFH Trigger: GTGGAACTGGCCCCAGATAAACTCCCATTTGTGCAAGAGAATGGAAGACATCAGAGAAGCCTTCCTGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
||
| CDS CAA 90 bp | AAATATCCATTAAACACCTCAAGTTCCCCGGCCTTCTCTTCTCTGTaGACATCATACATCACCACCAGCTCCCCGTTCACTGCAGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KYPLNTSSSPAFSSL*TSYITTSSPFTAVS Trigger: AGAGACTGCAGTGAACGGGGAGCTGGTGGTGATGTATGATGTCAACAGAGAAGAGAAGGCCGGGGAACTTGAGGTGTTTAATGGATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS CAA 90 bp | GTCTCTGTGCAGTTGGGGCATTTTCTTTGTTGTGCTACTGTGGGCTaGAAGGATACATGTGCCTTCTGTTGTCCTTTAGATATGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVQLGHFLCCATVG*KDTCAFCCPLDMTG Trigger: CCCTGTCATATCTAAAGGACAACAGAAGGCACATGTATCCTTCAAGCCCACAGTAGCACAACAAAGAAAATGCCCCAACTGCACAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
||
| CDS TCA 72 bp | TTCTCTATCACCATGGCAGTAAGCGGAGTCACGATGTaGTGGTCTAGAGACATCTGCAGGATTGTTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSITMAVSGVTM*WSRDICRIVLV Trigger: CACCAAAACAATCCTGCAGATGTCTCTAGACCATCACATCGTGACTCCGCTTACTGCCATGGTGATAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | TTGTCCTTTGACAGAAACTCCTCCAAGTCATCCATCTaGCTCAGGGTTTCCAAGACCAATTCTGTGTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSFDRNSSKSSI*LRVSKTNSVLA Trigger: GGCTAACACAGAATTGGTCTTGGAAACCCTGAGCCAGATGGATGACTTGGAGGAGTTTCTGTCAAAGGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CCA 72 bp | TTGAAAGGTTGTCCAAGCCAGCAGTCATTTCTCCCATaGCAGCTACGGTTGGATCTCCATCAGAAACCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKGCPSQQSFLP*QLRLDLHQKPK Trigger: TTTTGGTTTCTGATGGAGATCCAACCGTAGCTGCCATGGGAGAAATGACTGCTGGCTTGGACAACCTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155809.9 |
||
| CDS TCA 72 bp | GGCCAGTTCCACAAGATCACTGTATTCTGCAAATTCTaGGTTTCCGTTTATGGGGATTTCGAAGGCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GQFHKITVFCKF*VSVYGDFEGLC Trigger: GCACAAGCCTTCGAAATCCCCATAAACGGAAACTCAGAATTTGCAGAATACAGTGATCTTGTGGAACTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
||
| CDS CCA 72 bp | AATTCTGTGTTAGCCGAAGTTGCCGTGATGATGCTCTaGACTTCTGTCAGTTTGCTGGGATCAAATTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NSVLAEVAVMML*TSVSLLGSNFP Trigger: AGGGAAATTTGATCCCAGCAAACTGACAGAAGTCCAGAGCATCATCACGGCAACTTCGGCTAACACAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
||
| CDS CAA 90 bp | GAAATGGCCTTCAAATGTGTCAGGAACATGAAGAAATCTCATTCCTaGGGGTTCGATAATCCACACATTCACCTCCAAGTGTTTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EMAFKCVRNMKKSHS*GFDNPHIHLQVFGQ Trigger: CTGGCCAAACACTTGGAGGTGAATGTGTGGATTATCGAACCCCAAGGAATGAGATTTCTTCATGTTCCTGACACATTTGAAGGCCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS TCA 72 bp | AGCAGTGCCTCGTTGATATTCGTGCCTCCACTAGGCTaGATTTTCTCAATGTATCTCTTGGCATCTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: SSASLIFVPPLG*IFSMYLLASAI Trigger: AATTGCAGATGCCAAGAGATACATTGAGAAAATTCAGCCTAGTGGAGGCACGAATATCAACGAGGCACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS CAA 72 bp | CAGTTGGGGCATTTTCTTTGTTGTGCTACTGTGGGCTaGAAGGATACATGTGCCTTCTGTTGTCCTTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: QLGHFLCCATVG*KDTCAFCCPLD Trigger: ATCTAAAGGACAACAGAAGGCACATGTATCCTTCAAGCCCACAGTAGCACAACAAAGAAAATGCCCCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS CAA 90 bp | GGATACATGTGCCTTCTGTTGTCCTTTAGATATGACAGGGACGCCTaGGAAATGGCCTTCAAATGTGTCAGGAACATGAAGAAATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GYMCLLLSFRYDRDA*EMAFKCVRNMKKSH Trigger: ATGAGATTTCTTCATGTTCCTGACACATTTGAAGGCCATTTCCAAGGCGTCCCTGTCATATCTAAAGGACAACAGAAGGCACATGTATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS TCA 72 bp | GCTGAGGCACAAAATAATCCTTATAATGTCCATCGATaGAACCTTTCCCACTGTTGTGTACAAACCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AEAQNNPYNVHR*NLSHCCVQTSR Trigger: CCTGCTGGTTTGTACACAACAGTGGGAAAGGTTTCATCGATGGACATTATAAGGATTATTTTGTGCCTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 72 bp | ATGTCTTCCATTCTCTTGCACAAATGGGAGTTTATCTaGGGCCAGTTCCACAAGATCACTGTATTCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MSSILLHKWEFI*GQFHKITVFCK Trigger: TTTGCAGAATACAGTGATCTTGTGGAACTGGCCCCAGATAAACTCCCATTTGTGCAAGAGAATGGAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS TCA 72 bp | GTAGTTGTGGAAATTGTTTTGGGTGACATCTGTTACTaGTGCCTGCGGGTAGTTAAACTGAACATTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VVVEIVLGDICY*CLRVVKLNISE Trigger: CTCAGAAATGTTCAGTTTAACTACCCGCAGGCATCAGTAACAGATGTCACCCAAAACAATTTCCACAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042290.14 |
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| CDS CCA 72 bp | GATCACTGTATTCTGCAAATTCTGAGTTTCCGTTTATaGGGATTTCGAAGGCTTGTGCTTCCAGAAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: DHCILQILSFRL*GFRRLVLPEET Trigger: TGTTTCTTCTGGAAGCACAAGCCTTCGAAATCCCCATAAACGGAAACTCAGAATTTGCAGAATACAGTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 ENSMUST00000161909.2 |
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| CDS CAA 72 bp | TTCAAATGTGTCAGGAACATGAAGAAATCTCATTCCTaGGGGTTCGATAATCCACACATTCACCTCCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: FKCVRNMKKSHS*GFDNPHIHLQV Trigger: CACTTGGAGGTGAATGTGTGGATTATCGAACCCCAAGGAATGAGATTTCTTCATGTTCCTGACACATTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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| CDS CCA 72 bp | GTTCGAACATTATGGTTGAAATCAACCACAGAGAATTaGTCGTCTGTTCTTAGGTCATCCAATATCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VRTLWLKSTTEN*SSVLRSSNIVF Trigger: GAAGACGATATTGGATGACCTAAGAACAGACGACCAATTCTCTGTGGTTGATTTCAACCATAATGTTCGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042290.14 ENSMUST00000155809.9 |
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