Pregenerated sensors for ITGBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032925Ensembl transcript IDs: ENSMUST00000049681.14, ENSMUST00000132026.2, ENSMUST00000142161.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTCACAGGTCTTaGCATAGACTCTGCTGTCCCCAGGAGGGTAACAAGTGCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: HHPGPRSAGHHTHRS*HRLCCPQEGNKCIC Trigger: GCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGACCTGTGAGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | CCTCGCAGCGCCGGTCATCACACTCACAGGTCTTGCCATAGACTCTaGTGTCCCCAGGAGGGTAACAAGTGCATCTGCCACATTCGCATC | + |
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Preference number: 1 (lower is better) Translates to: PRSAGHHTHRSCHRL*CPQEGNKCICHIRI Trigger: GATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGACCTGTGAGTGTGATGACCGGCGCTGCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | TGCTGTCCCCAGGAGGGTAACAAGTGCATCTGCCACATTCGCATCTaGCCCTTCCAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: CCPQEGNKCICHIRI*PFQSKEDQNYPGTS Trigger: AGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | CACAGGTCTTGCCATAGACTCTGCTGTCCCCAGGAGGGTAACAAGTaGATCTGCCACATTCGCATCTGCCCCTTCCAGAGCAAGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: HRSCHRLCCPQEGNK*ICHIRICPFQSKED Trigger: ATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CCA 90 bp | TGCCCCTTCCAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCTTaGTGCTCTCCTCAGCTGACAATGGGCAATTCCTTGGGTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: CPFQSKEDQNYPGTS*CSPQLTMGNSLGAH Trigger: GTGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | TCTTGCCATAGACTCTGCTGTCCCCAGGAGGGTAACAAGTGCATCTaGCACATTCGCATCTGCCCCTTCCAGAGCAAGGAAGATCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: SCHRLCCPQEGNKCI*HIRICPFQSKEDQN Trigger: GTTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | CCCTTCCAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCTTGGTaGTCTCCTCAGCTGACAATGGGCAATTCCTTGGGTGCTCACATT | + |
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Preference number: 1 (lower is better) Translates to: PFQSKEDQNYPGTSW*SPQLTMGNSLGAHI Trigger: AATGTGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CCA 90 bp | CATTCGCATCTGCCCCTTCCAGAGCAAGGAAGATCAGAACTACCCTaGCACTTCTTGGTGCTCTCCTCAGCTGACAATGGGCAATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HSHLPLPEQGRSELP*HFLVLSSADNGQFL Trigger: AAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR TCA 90 bp | AGGAAGATCAGAACTACCCTGGCACTTCTTGGTGCTCTCCTCAGCTaGCAATGGGCAATTCCTTGGGTGCTCACATTTCTTCCCATACCA | + |
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Preference number: 1 (lower is better) Translates to: RKIRTTLALLGALLS*QWAIPWVLTFLPIP Trigger: TGGTATGGGAAGAAATGTGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | CCTTCCCTGAGCACAATGTGCCATCTGCTGACTCACACAGACTCCTaGTTTGTTCTTCTGTCATATTACACTTCCGCAGGTGTTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: PSLSTMCHLLTHTDS*FVLLSYYTSAGVGR Trigger: TCTGCCAACACCTGCGGAAGTGTAATATGACAGAAGAACAAAGCAGGAGTCTGTGTGAGTCAGCAGATGGCACATTGTGCTCAGGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR TCA 90 bp | GCCTGCTCTGCAGTCACATCTTCCACAGTTACACTGCCCATGACCTaGACAGAAATCATCAGAGTATCGATCATAAACAGCTCTGCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: ACSAVTSSTVTLPMT*TEIIRVSIINSSAV Trigger: GACTGCAGAGCTGTTTATGATCGATACTCTGATGATTTCTGTTCAGGTCATGGGCAGTGTAACTGTGGAAGATGTGACTGCAGAGCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | CATGACCTGAACAGAAATCATCAGAGTATCGATCATAAACAGCTCTaGAGTCCCTTTCATCACACTCACACGTGTCCCCATGAATGTCTC | + |
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Preference number: 1 (lower is better) Translates to: HDLNRNHQSIDHKQL*SPFHHTHTCPHECL Trigger: GAGACATTCATGGGGACACGTGTGAGTGTGATGAAAGGGACTGCAGAGCTGTTTATGATCGATACTCTGATGATTTCTGTTCAGGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CCA 90 bp | TTTCTTCCTGTAAGAGATTCTTGTGAGTTTAGAGCCCTTGTGATCTaGGAAGCGCCCAATCCATCATCACACCTCGTATGTGTCTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: FLPVRDSCEFRALVI*EAPNPSSHLVCVCH Trigger: ATGACAGACACATACGAGGTGTGATGATGGATTGGGCGCTTCCCAGATCACAAGGGCTCTAAACTCACAAGAATCTCTTACAGGAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR GCA 90 bp | AGTCACAAAACTCCCCTGAAATATACCACTCTTCTCCAGAACAAATaGACTTTCCACAATGACAAGAACCCTTCCCTGAGCACAATGTGC | + |
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Preference number: 1 (lower is better) Translates to: SHKTPLKYTTLLQNK*TFHNDKNPSLSTMC Trigger: GCACATTGTGCTCAGGGAAGGGTTCTTGTCATTGTGGAAAGTGCATTTGTTCTGGAGAAGAGTGGTATATTTCAGGGGAGTTTTGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR TCA 90 bp | ATCGTGTTTGTCACAGTCTCTGTCATCACAGTCACAAAACTCCCCTaGAATATACCACTCTTCTCCAGAACAAATGCACTTTCCACAATG | + |
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Preference number: 1 (lower is better) Translates to: IVFVTVSVITVTKLP*NIPLFSRTNALSTM Trigger: CATTGTGGAAAGTGCATTTGTTCTGGAGAAGAGTGGTATATTTCAGGGGAGTTTTGTGACTGTGATGACAGAGACTGTGACAAACACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CAA 90 bp | CCTGGCACTTCTTGGTGCTCTCCTCAGCTGACAATGGGCAATTCCTaGGGTGCTCACATTTCTTCCCATACCAGCCTGCTCTGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PGTSWCSPQLTMGNS*GAHISSHTSLLCSH Trigger: GTGACTGCAGAGCAGGCTGGTATGGGAAGAAATGTGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CAA 90 bp | CTGCCCCTTCCAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCTaGGTGCTCTCCTCAGCTGACAATGGGCAATTCCTTGGGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LPLPEQGRSELPWHF*VLSSADNGQFLGCS Trigger: TGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGCCTCCGCAGACCACACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTTTTACTAAAGTTGTTTaGATTGAAGACCCAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HGLRRPHHPGPRSAGHHTFTKVV*IEDPVG Trigger: CCCAACTGGGTCTTCAATTCAAACAACTTTAGTAAA...AGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTGTGGTCTGCGGAGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCATCTGCCACATTCGCATCTGCCCCTTCCAGAGCAAGGAAGATCAGAACCTTCCCATACCAGCCTaGTCTGCAGTCACATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KCICHIRICPFQSKEDQNLPIPA*SAVTSS Trigger: GGAAGATGTGACTGCAGAGCAGGCTGGTATGGGAAG...GTTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGCATCTGCCACATTCGCATCTGCCCCTTCCAGAGCAAGGAAGATCAGAACATACCAGCCTGCTCTaGAGTCACATCTTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: QVHLPHSHLPLPEQGRSEHTSLL*SHIFHS Trigger: ACTGTGGAAGATGTGACTGCAGAGCAGGCTGGTATG...TTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTCAATGTGCCATCTGCTaGCTCACACAGACTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IPSIPAFTVSTATDSIPCQCAIC*LTQTPA Trigger: AGCAGGAGTCTGTGTGAGTCAGCAGATGGCACATTG...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAAATGAGAACAAGAACCCTTCCCTaGGCACAATGTGCCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: SQHSQFPQLQIPFPVQMRTRTLP*AQCAIC Trigger: GCAGATGGCACATTGTGCTCAGGGAAGGGTTCTTGT...TCTCATTTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR GCA 90 bp | CATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAAATGAGACCATCGCCTGGCACTTCTTGGTaGTCTCCTCAGCTGACAATG | + |
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Preference number: 2 (lower is better) Translates to: HSQFPQLQIPFPVQMRPSPGTSW*SPQLTM Trigger: CATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGG...CGATGGTCTCATTTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR CCA 90 bp | CATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAATCCCCAGTCCCCAGTTaGATCAACATCATGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HPSQHSQFPQLQIPFPVQSPVPS*INIMAR Trigger: TCTTGCCATGATGTTGATCCAACTGGGGACTGGGGA...TTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTAGATCAGAACTACCCTaGCACTTCTTGGTGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IPSIPAFTVSTATDSIPCRSELP*HFLVLS Trigger: GGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCT...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTATGCACTTTCCACAATaGCAAGAACCCTTCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: IPSIPAFTVSTATDSIPCMHFPQ*QEPFPE Trigger: CTCAGGGAAGGGTTCTTGTCATTGTGGAAAGTGCAT...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR CAA 90 bp | CCACAGCTACAGATTCCATTCCCTGTGCAAATGAGACCATCGTGTTaGTCACAGTCTCTGTCATCACAGTCACAAAACTCCCCTGAAATA | + |
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Preference number: 2 (lower is better) Translates to: PQLQIPFPVQMRPSC*SQSLSSQSQNSPEI Trigger: TATTTCAGGGGAGTTTTGTGACTGTGATGACAGAGACTGTGACAAACACGATGGTCTCATTTGCACAGGGAATGGAATCTGTAGCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACAGTTTAGAGCCCTTGTaGTCTGGGAAGCGCCCAATC | + |
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Preference number: 2 (lower is better) Translates to: SNVLNSILRTPKWSGYCNSLEPL*SGKRPI Trigger: GATTGGGCGCTTCCCAGATCACAAGGGCTCTAAACT...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTAGTTTAGAGCCCTTGTaGTCTGGGAAGCGCCCAATC | + |
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Preference number: 2 (lower is better) Translates to: FSVDIVKCLRGCKIALFISLEPL*SGKRPI Trigger: GATTGGGCGCTTCCCAGATCACAAGGGCTCTAAACT...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCGTCACAAAACTCCCCTaGAATATACCACTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLVTKLP*NIPLFS Trigger: GGAGAAGAGTGGTATATTTCAGGGGAGTTTTGTGAC...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGATCATAAACAGCTCTaGAGTCCCTTTCATCACACT | + |
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Preference number: 2 (lower is better) Translates to: IPSIPAFTVSTATDSIPCDHKQL*SPFHHT Trigger: AGTGTGATGAAAGGGACTGCAGAGCTGTTTATGATC...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTACTATTTTCTTTAGGGTaGTCACCATTGTCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLLFSLG*SPLSVA Trigger: GGCCACAGACAATGGTGACCACCCTAAAGAAAATAG...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTAAATGTCTTAGGGGTTaGAAAATTGCCCTCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: IPSIPAFTVSTATDSIPCKCLRG*KIALFI Trigger: AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTT...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCTATTTTCTTTAGGGTaGTCACCATTGTCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: SNVLNSILRTPKWSGYCNLFSLG*SPLSVA Trigger: GGCCACAGACAATGGTGACCACCCTAAAGAAAATAG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTCAATGGGCAATTCCTTaGGTGCTCACATTTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: FSVDIVKCLRGCKIALFIQWAIP*VLTFLP Trigger: GGGAAGAAATGTGAGCACCCAAGGAATTGCCCATTG...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTATTTACTAAAGTTGTTTaGATTGAAGACCCAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLFTKVV*IEDPVG Trigger: CCCAACTGGGTCTTCAATTCAAACAACTTTAGTAAA...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTGAAATGAATGCAGTATaGAGACCCCCATGTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: FSVDIVKCLRGCKIALFIEMNAV*RPPCFL Trigger: TAGGAAACATGGGGGTCTTCATACTGCATTCATTTC...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTATTTAGTGTCCACTTCTaGACTTGTAAAATCAATGCC | + |
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Preference number: 2 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLFSVHF*TCKINA Trigger: GGCATTGATTTTACAAGTTCAGAAGTGGACACTAAA...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCCTGGAAAAATCTGACTaGTTGGTTTATGTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLLEKSD*LVYVRI Trigger: TATTCTCACATAAACCAACCAGTCAGATTTTTCCAG...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACTTTAGTGTCCACTTCTaGACTTGTAAAATCAATGCC | + |
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Preference number: 2 (lower is better) Translates to: SNVLNSILRTPKWSGYCNFSVHF*TCKINA Trigger: GGCATTGATTTTACAAGTTCAGAAGTGGACACTAAA...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACTTACATTTGAAGACTTaGCTGATAAAGTCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SNVLNSILRTPKWSGYCNLHLKT*LIKSKP Trigger: TGGCTTGGACTTTATCAGTCAAGTCTTCAAATGTAA...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTAAATGTCTTAGGGGTTaGAAAATTGCCCTCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: FSVDIVKCLRGCKIALFIKCLRG*KIALFI Trigger: AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTT...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATTAAAGGGAAATGAATaGAGTATGAAGACCCCCATG | + |
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Preference number: 2 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVLKGNE*SMKTPM Trigger: CATGGGGGTCTTCATACTGCATTCATTTCCCTTTAA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTCTGGAAAAATCTGACTaGTTGGTTTATGTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: FSVDIVKCLRGCKIALFILEKSD*LVYVRI Trigger: TATTCTCACATAAACCAACCAGTCAGATTTTTCCAG...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAAGTCATATGGAATCCTaGAAAAATCTGACTGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVSHMES*KNLTGW Trigger: CCAACCAGTCAGATTTTTCCAGGATTCCATATGACT...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATTTACTAAAGTTGTTTaGATTGAAGACCCAGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVFTKVV*IEDPVG Trigger: CCCAACTGGGTCTTCAATTCAAACAACTTTAGTAAA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| 3UTR GCA 72 bp | TGCCATAGACTCTGCTGTCCCCAGGAGGGTAACAAGTaGATCTGCCACATTCGCATCTGCCCCTTCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CHRLCCPQEGNK*ICHIRICPFQS Trigger: GCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | GCCGGTCATCACACTCACAGGTCTTGCCATAGACTCTaGTGTCCCCAGGAGGGTAACAAGTGCATCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGHHTHRSCHRL*CPQEGNKCICH Trigger: GTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGACCTGTGAGTGTGATGACCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | ATCCTTTCTCACAAACACAGCGACCACAGGAGCACATaGCATGGCCTCCGCAGACCACACCATCCAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILSHKHSDHRST*HGLRRPHHPGP Trigger: AGGACCTGGATGGTGTGGTCTGCGGAGGCCATGGCATGTGCTCCTGTGGTCGCTGTGTTTGTGAGAAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCAGACCACACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTCACAGGTCCTAAAGTTGTTTGAATaGAAGACCCAGTTGGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PQTTPSRSSQRRSSHSQVLKLFE*KTQLGS Trigger: ACTGCCCAACTGGGTCTTCAATTCAAACAACTTTAG...GACCTGTGAGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTGTGGTCTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | AGACTCTGCTGTCCCCAGGAGGGTAACAAGTGCATCTaGCACATTCGCATCTGCCCCTTCCAGAGCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLCCPQEGNKCI*HIRICPFQSKE Trigger: TTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTGGGGACAGCAGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR CCA 72 bp | CTGCCCCTTCCAGAGCAAGGAAGATCAGAACTACCCTaGCACTTCTTGGTGCTCTCCTCAGCTGACAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPLPEQGRSELP*HFLVLSSADNG Trigger: CCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | CAGGAGGGTAACAAGTGCATCTGCCACATTCGCATCTaGCCCTTCCAGAGCAAGGAAGATCAGAACTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QEGNKCICHIRI*PFQSKEDQNYP Trigger: AGGGTAGTTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTGTTACCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | ATTCCTTGGGTGCTCACATTTCTTCCCATACCAGCCTaGTCTGCAGTCACATCTTCCACAGTTACACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IPWVLTFLPIPA*SAVTSSTVTLP Trigger: GGGCAGTGTAACTGTGGAAGATGTGACTGCAGAGCAGGCTGGTATGGGAAGAAATGTGAGCACCCAAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | AGCAAGGAAGATCAGAACTACCCTGGCACTTCTTGGTaGTCTCCTCAGCTGACAATGGGCAATTCCTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SKEDQNYPGTSW*SPQLTMGNSLG Trigger: ACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR CCA 72 bp | CAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCTTaGTGCTCTCCTCAGCTGACAATGGGCAATTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QSKEDQNYPGTS*CSPQLTMGNSL Trigger: CAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAAACACTTCCGCAGGTGTaGGCAGAGCTTACCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: HPSQHSQFPQLQIPFPVQTLPQV*AELTKP Trigger: TGGTTTGGTAAGCTCTGCCAACACCTGCGGAAGTGT...TTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR TCA 72 bp | AGAACTACCCTGGCACTTCTTGGTGCTCTCCTCAGCTaGCAATGGGCAATTCCTTGGGTGCTCACATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTTLALLGALLS*QWAIPWVLTFL Trigger: AAGAAATGTGAGCACCCAAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAATCATCAGAGTATCGATCATAAACAGCTCTGCAGTCCCTTTCATCACACTCCCCAGTCCCCAGTaGGATCAACATCATGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TEIIRVSIINSSAVPFITLPSPQ*DQHHGK Trigger: CTTGCCATGATGTTGATCCAACTGGGGACTGGGGAG...TGTGATGAAAGGGACTGCAGAGCTGTTTATGATCGATACTCTGATGATTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR GCA 72 bp | AGCACAATGTGCCATCTGCTGACTCACACAGACTCCTaGTTTGTTCTTCTGTCATATTACACTTCCGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: STMCHLLTHTDS*FVLLSYYTSAG Trigger: ACCTGCGGAAGTGTAATATGACAGAAGAACAAAGCAGGAGTCTGTGTGAGTCAGCAGATGGCACATTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR TCA 72 bp | GCAGTCACATCTTCCACAGTTACACTGCCCATGACCTaGACAGAAATCATCAGAGTATCGATCATAAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AVTSSTVTLPMT*TEIIRVSIINS Trigger: GCTGTTTATGATCGATACTCTGATGATTTCTGTTCAGGTCATGGGCAGTGTAACTGTGGAAGATGTGACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTTTAGGGGTTGCAAAATaGCCCTCTTCATTTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPSIPAFTVSTATDSIPCLGVAK*PSSFVK Trigger: TTTCACAAATGAAGAGGGCAATTTTGCAACCCCTAA...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCGACCCCACCATTTCTTaGAAGAAAAGAGAGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLDPTIS*KKREPL Trigger: TAATGGCTCTCTTTTCTTCAAAGAAATGGTGGGGTC...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| 3UTR CCA 72 bp | CTTTGTTCTTCTGTCATATTACACTTCCGCAGGTGTTaGCAGAGCTTACCAAACCATCCTTTCTCACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LCSSVILHFRRC*QSLPNHPFSQT Trigger: TGTTTGTGAGAAAGGATGGTTTGGTAAGCTCTGCCAACACCTGCGGAAGTGTAATATGACAGAAGAACAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAGACCCCACCATTTCTTaGAAGAAAAGAGAGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLDPTIS*KKREPL Trigger: TAATGGCTCTCTTTTCTTCAAAGAAATGGTGGGGTC...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCTTTACATTTGAAGACTaGACTGATAAAGTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLFTFED*TDKVQA Trigger: GGCTTGGACTTTATCAGTCAAGTCTTCAAATGTAAA...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAATCATCAGAGTATCGATCATAAACAGCTCTGCAGTCCCTTTCATCACAAGGGTTCCCAGACCGTaGCTAAAATTAATCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TEIIRVSIINSSAVPFITRVPRP*LKLINL Trigger: CAAGTTGATTAATTTTAGCAACGGTCTGGGAACCCT...TGTGATGAAAGGGACTGCAGAGCTGTTTATGATCGATACTCTGATGATTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATTAGGGGTTGCAAAATaGCCCTCTTCATTTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVLGVAK*PSSFVK Trigger: TTTCACAAATGAAGAGGGCAATTTTGCAACCCCTAA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| 3UTR TCA 72 bp | TTATGGTGTAACTTATATCAGTTTACTAAAGTTGTTTaGATTGAAGACCCAGTTGGGCAGTCAGAAATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWCNLYQFTKVV*IEDPVGQSEIE Trigger: CTCTATTTCTGACTGCCCAACTGGGTCTTCAATTCAAACAACTTTAGTAAACTGATATAAGTTACACCATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| 3UTR CCA 72 bp | CCATGTCTAGTCTTAAAAACAAGATCTGCTAGTTCTTaGGATCTAAAGTGGTTACTCCAATTTATTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PCLVLKTRSASS*DLKWLLQFILF Trigger: GAAAAGAATAAATTGGAGTAACCACTTTAGATCCCAAGAACTAGCAGATCTTGTTTTTAAGACTAGACATGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS-3UTR GCA 90 bp | CATGGCCTCCGCAGACCACACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTCATCACACTTGCACTTaGCGCAGTCACAATTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: HGLRRPHHPGPRSAGHHTHHTCT*RSHNYR Trigger: ACGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATG...AGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTGTGGTCTGCGGAGGCCATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | CCGCAGACCACACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTCACAGGTCTATCACACTTACACCTaGCACAGTGACATGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQTTPSRSSQRRSSHSQVYHTYT*HSDMYL Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...GACCTGTGAGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTGTGGTCTGCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCTCTGCGTTCGGACTCTaGCCGGGACAGCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLSAFGL*PGQPAG Trigger: CCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGA...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTCCAGGTTCGGTCACGTaGCAGATGCAGACCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IPSIPAFTVSTATDSIPCPGSVT*QMQTPH Trigger: GTGTGGGGTCTGCATCTGTCACGTGACCGAACCTGG...ACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTCACCGGCCACGGTCATaGCACAGAGCGCTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPHRPRS*HRALPG Trigger: CCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTG...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| 3UTR CAA 72 bp | CCAGAGCAAGGAAGATCAGAACTACCCTGGCACTTCTaGGTGCTCTCCTCAGCTGACAATGGGCAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PEQGRSELPWHF*VLSSADNGQFL Trigger: AAGGAATTGCCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCCTTGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTACCAGGTTCGGTCACGTaGCAGATGCAGACCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLPGSVT*QMQTPH Trigger: GTGTGGGGTCTGCATCTGTCACGTGACCGAACCTGG...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAATCTGCGTTCGGACTCTaGCCGGGACAGCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICESAFGL*PGQPAG Trigger: CCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGA...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTACACCGGCCACGGTCATaGCACAGAGCGCTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVHRPRS*HRALPG Trigger: CCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTG...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR CCA 90 bp | CAGAGTATCGATCATAAACAGCTCTGCAGTCCCTTTCATCACACTCACACGTGTTCGCATATCCACTCATaGCACTCACACAGTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: QSIDHKQLCSPFHHTHTCSHIHS*HSHSGP Trigger: CGGTCCACTGTGTGAGTGCCATGAGTGGATATGCGA...ACACGTGTGAGTGTGATGAAAGGGACTGCAGAGCTGTTTATGATCGATACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCCACACTCACAGGTCTTaGCATAGACTCTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLHTHRS*HRLCCP Trigger: GGGACAGCAGAGTCTATGGCAAGACCTGTGAGTGTG...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTATCTTGCCATAGACTCTaGTGTCCCCAGGAGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLSCHRL*CPQEGN Trigger: GTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGA...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAAATGAGAGAGCAGATGACATCTTaGGAGTTCTTGCACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQHSQFPQLQIPFPVQMREQMTS*EFLHIW Trigger: CCAGATGTGCAAGAACTCCCAAGATGTCATCTGCTC...TCTCATTTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR CCA 90 bp | CATCCATCCCAGCATTCACAGTTTCCACAGCTACAGATTCCATTCCCTGTGCAAATGTGTCCTTTGCCTTaGCCTCCACATACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPSQHSQFPQLQIPFPVQMCPLP*PPHTSS Trigger: AGAAGAAGTATGTGGAGGCCAAGGCAAAGGACACAT...TTGCACAGGGAATGGAATCTGTAGCTGTGGAAACTGTGAATGCTGGGATGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCTTCCCATACCAGCCTaGTCTGCAGTCACATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNLPIPA*SAVTSS Trigger: GGAAGATGTGACTGCAGAGCAGGCTGGTATGGGAAG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCCTGGCACTTCTTGGTaGTCTCCTCAGCTGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNPGTSW*SPQLTM Trigger: CATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACTCTTGCCATAGACTCTaGTGTCCCCAGGAGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNSCHRL*CPQEGN Trigger: GTTACCCTCCTGGGGACAGCAGAGTCTATGGCAAGA...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCACACTCACAGGTCTTaGCATAGACTCTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNHTHRS*HRLCCP Trigger: GGGACAGCAGAGTCTATGGCAAGACCTGTGAGTGTG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAAGATCAGAACTACCCTaGCACTTCTTGGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLRSELP*HFLVLS Trigger: GGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCT...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTCAATGTGCCATCTGCTaGCTCACACAGACTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFIQCAIC*LTQTPA Trigger: AGCAGGAGTCTGTGTGAGTCAGCAGATGGCACATTG...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTACAAGAACCCTTCCCTaGGCACAATGTGCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPTRTLP*AQCAIC Trigger: GCAGATGGCACATTGTGCTCAGGGAAGGGTTCTTGT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAATGCACTTTCCACAATaGCAAGAACCCTTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLMHFPQ*QEPFPE Trigger: CTCAGGGAAGGGTTCTTGTCATTGTGGAAAGTGCAT...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCATACCAGCCTGCTCTaGAGTCACATCTTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNHTSLL*SHIFHS Trigger: ACTGTGGAAGATGTGACTGCAGAGCAGGCTGGTATG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTCTTCCCATACCAGCCTaGTCTGCAGTCACATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFILPIPA*SAVTSS Trigger: GGAAGATGTGACTGCAGAGCAGGCTGGTATGGGAAG...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTCCTGGCACTTCTTGGTaGTCTCCTCAGCTGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPPGTSW*SPQLTM Trigger: CATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGG...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTCGCATATCCACTCATaGCACTCACACAGTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFISHIHS*HSHSGP Trigger: CGGTCCACTGTGTGAGTGCCATGAGTGGATATGCGA...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTACAATGGGCAATTCCTTaGGTGCTCACATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLQWAIP*VLTFLP Trigger: GGGAAGAAATGTGAGCACCCAAGGAATTGCCCATTG...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTACCCTGGCACTTCTTaGTGCTCTCCTCAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFIYPGTS*CSPQLT Trigger: TGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTA...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| 3UTR CAA 72 bp | GCTTTGTTCTTCTGTCATATTACACTTCCGCAGGTGTaGGCAGAGCTTACCAAACCATCCTTTCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALFFCHITLPQV*AELTKPSFLTN Trigger: GTTTGTGAGAAAGGATGGTTTGGTAAGCTCTGCCAACACCTGCGGAAGTGTAATATGACAGAAGAACAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACCATCACACTTGCACTTaGCGCAGTCACAATTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNHHTCT*RSHNYR Trigger: ACGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATG...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAACAGTGACATGTACCTaGATTGGAGCAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLTVTCT*IGADDI Trigger: GATGTCATCTGCTCCAATGCAGGTACATGTCACTGT...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACGAGCAGATGACATCTTaGGAGTTCTTGCACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNEQMTS*EFLHIW Trigger: CCAGATGTGCAAGAACTCCCAAGATGTCATCTGCTC...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAATCCCCAGTCCCCAGTTaGATCAACATCATGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICESPVPS*INIMAR Trigger: TCTTGCCATGATGTTGATCCAACTGGGGACTGGGGA...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTAGATCAGAACTACCCTaGCACTTCTTGGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPRSELP*HFLVLS Trigger: GGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACACACTGCCCATGACCTaGACAGAAATCATCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNTLPMT*TEIIRV Trigger: TACTCTGATGATTTCTGTTCAGGTCATGGGCAGTGT...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTACAATGTGCCATCTGCTaGCTCACACAGACTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVQCAIC*LTQTPA Trigger: AGCAGGAGTCTGTGTGAGTCAGCAGATGGCACATTG...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAACAAGAACCCTTCCCTaGGCACAATGTGCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVTRTLP*AQCAIC Trigger: GCAGATGGCACATTGTGCTCAGGGAAGGGTTCTTGT...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAGATCATAAACAGCTCTaGAGTCCCTTTCATCACACT | + |
|
Preference number: 4 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLDHKQL*SPFHHT Trigger: AGTGTGATGAAAGGGACTGCAGAGCTGTTTATGATC...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAGGTAACAAGTGCATCTaGCACATTCGCATCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVGNKCI*HIRICP Trigger: GGGGCAGATGCGAATGTGGCAGATGCACTTGTTACC...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCACTCACACAGACTCCTaGTTTGTTCTTCTGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLTHTDS*FVLLSY Trigger: ATATGACAGAAGAACAAAGCAGGAGTCTGTGTGAGT...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCCTTCTCCAGAACAAATaGACTTTCCACAATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLLLQNK*TFHNDK Trigger: CTTGTCATTGTGGAAAGTGCATTTGTTCTGGAGAAG...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAATGGTCAGGTCACACTTaGTTGGGTACTGACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICEWSGHT*LGTDKL Trigger: AAGCTTGTCAGTACCCAACCAAGTGTGACCTGACCA...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR CCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACACAGACTTTGCCATCTaGAGATGTGCATCTTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNTDFAI*RCASSL Trigger: AAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGT...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTACACTGCCCATGACCTaGACAGAAATCATCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFITLPMT*TEIIRV Trigger: TACTCTGATGATTTCTGTTCAGGTCATGGGCAGTGT...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTGTCACAAAACTCCCCTaGAATATACCACTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFIVTKLP*NIPLFS Trigger: GGAGAAGAGTGGTATATTTCAGGGGAGTTTTGTGAC...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTGTCACAAAACTCCCCTaGAATATACCACTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPVTKLP*NIPLFS Trigger: GGAGAAGAGTGGTATATTTCAGGGGAGTTTTGTGAC...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTACAGTGACATGTACCTaGATTGGAGCAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFITVTCT*IGADDI Trigger: GATGTCATCTGCTCCAATGCAGGTACATGTCACTGT...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAAACAGTGACATGTACCTaGATTGGAGCAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICETVTCT*IGADDI Trigger: GATGTCATCTGCTCCAATGCAGGTACATGTCACTGT...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTTATCACACTTACACCTaGCACAGTGACATGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPYHTYT*HSDMYL Trigger: CAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATA...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATGCCATCTGGAGATGTaGATCTTCGCTTGCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVCHLEM*IFACFP Trigger: GGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAACACATGTTCCTCTGTTaGTACAGACTTTGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICEHMFLC*YRLCHL Trigger: CAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTG...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTACATACCAGCCTGCTCTaGAGTCACATCTTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVHTSLL*SHIFHS Trigger: ACTGTGGAAGATGTGACTGCAGAGCAGGCTGGTATG...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATCCCTGAGCACAATGTaGCATCTGCTGACTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVSLSTM*HLLTHT Trigger: TGTGTGAGTCAGCAGATGGCACATTGTGCTCAGGGA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTATCCCCAGTCCCCAGTTaGATCAACATCATGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVSPVPS*INIMAR Trigger: TCTTGCCATGATGTTGATCCAACTGGGGACTGGGGA...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTGAGTCCATGTCCATCTaGATTATCACACTTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDIVKCLRGCKIALFIESMSI*IITLTP Trigger: AGGTGTAAGTGTGATAATTCAGATGGACATGGACTC...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR TCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAAGAGTCCATGTCCATCTaGATTATCACACTTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICEESMSI*IITLTP Trigger: AGGTGTAAGTGTGATAATTCAGATGGACATGGACTC...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTGAGTCCATGTCCATCTaGATTATCACACTTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPESMSI*IITLTP Trigger: AGGTGTAAGTGTGATAATTCAGATGGACATGGACTC...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAATGCACTTTCCACAATaGCAAGAACCCTTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVMHFPQ*QEPFPE Trigger: CTCAGGGAAGGGTTCTTGTCATTGTGGAAAGTGCAT...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTACATCACACTTGCACTTaGCGCAGTCACAATTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVHHTCT*RSHNYR Trigger: ACGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATG...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACACTCACACAGACTCCTaGTTTGTTCTTCTGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SNVLNSILRTPKWSGYCNTHTDS*FVLLSY Trigger: ATATGACAGAAGAACAAAGCAGGAGTCTGTGTGAGT...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAGAGCAGATGACATCTTaGGAGTTCTTGCACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVEQMTS*EFLHIW Trigger: CCAGATGTGCAAGAACTCCCAAGATGTCATCTGCTC...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTACAATGGGCAATTCCTTaGGTGCTCACATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVQWAIP*VLTFLP Trigger: GGGAAGAAATGTGAGCACCCAAGGAATTGCCCATTG...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTCTTCTCCAGAACAAATaGACTTTCCACAATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPLLQNK*TFHNDK Trigger: CTTGTCATTGTGGAAAGTGCATTTGTTCTGGAGAAG...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAAAAGCCAGATTTCACATaGATTTCCATTCCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VDIVKCLRGCKIALFICEKPDFT*ISIPSI Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTAAGCCAGATTTCACATaGATTTCCATTCCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPKPDFT*ISIPSI Trigger: GATGGATGGAATGGAAATGCATGTGAAATCTGGCTT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCTAATAGGCATTATCCAGATTTTTATAGAAGGCTGAGTCCTATAGTAGATCATAAACAGCTCTaGAGTCCCTTTCATCACACT | + |
|
Preference number: 4 (lower is better) Translates to: GFSNRHYPDFYRRLSPIVDHKQL*SPFHHT Trigger: AGTGTGATGAAAGGGACTGCAGAGCTGTTTATGATC...TACTATAGGACTCAGCCTTCTATAAAAATCTGGATAATGCCTATTAGAGAAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS GCA 90 bp | CATGGCACAGAGCGCTCCCTGGGGGCTGCCCAGGTGCACGACATCTaGGTTCGGACTCTGCCCGGGACAGCCTGCAGGGGGCGCCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: HGTERSLGAAQVHDI*VRTLPGTACRGRPT Trigger: TGTCGGGCGCCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
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| CDS GCA 90 bp | CCGGCCACGGTCATGGCACAGAGCGCTCCCTGGGGGCTGCCCAGGTaGACGACATCTGCGTTCGGACTCTGCCCGGGACAGCCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PATVMAQSAPWGLPR*TTSAFGLCPGQPAG Trigger: CCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 90 bp | GCTCCCTGGGGGCTGCCCAGGTGCACGACATCTGCGTTCGGACTCTaGCCGGGACAGCCTGCAGGGGGCGCCCGACAGGCTTCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: APWGLPRCTTSAFGL*PGQPAGGARQASQR Trigger: TCTCTGAGAAGCCTGTCGGGCGCCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
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| CDS GCA 90 bp | CACTCGCACCGGCCACGGTCATGGCACAGAGCGCTCCCTGGGGGCTaGCCAGGTGCACGACATCTGCGTTCGGACTCTGCCCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSHRPRSWHRALPGG*PGARHLRSDSARDS Trigger: GCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTGCGAGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS CCA 90 bp | GACCCCACACTCGCACCGGCCACGGTCATGGCACAGAGCGCTCCCTaGGGGCTGCCCAGGTGCACGACATCTGCGTTCGGACTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPTLAPATVMAQSAP*GLPRCTTSAFGLCP Trigger: CGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTGCGAGTGTGGGGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 90 bp | GCCCAGGTGCACGACATCTGCGTTCGGACTCTGCCCGGGACAGCCTaGAGGGGGCGCCCGACAGGCTTCTCAGAGATGGTAAGAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AQVHDICVRTLPGTA*RGRPTGFSEMVRSF Trigger: AAAGCTTCTTACCATCTCTGAGAAGCCTGTCGGGCGCCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
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| CDS-3UTR CAA 90 bp | CCGCAGACCACACCATCCAGGTCCTCGCAGCGCCGGTCATCACACTCACAGGTCACATCACACTTGCACTaGCCGCAGTCACAATTACCG | + |
|
Preference number: 5 (lower is better) Translates to: PQTTPSRSSQRRSSHSQVTSHLH*PQSQLP Trigger: CGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATGT...GACCTGTGAGTGTGATGACCGGCGCTGCGAGGACCTGGATGGTGTGGTCTGCGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS GCA 90 bp | TCTCGCATATCCACTCATGGCACTCACACAGTGGACCGAAGTAGGTaGCAGGTTCGGTCACGTGACAGATGCAGACCCCACACTCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SRISTHGTHTVDRSR*QVRSRDRCRPHTRT Trigger: GGTGCGAGTGTGGGGTCTGCATCTGTCACGTGACCGAACCTGGCACCTACTTCGGTCCACTGTGTGAGTGCCATGAGTGGATATGCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS CCA 90 bp | TTTCCCGTCGTAGGTCTCGCATATCCACTCATGGCACTCACACAGTaGACCGAAGTAGGTGCCAGGTTCGGTCACGTGACAGATGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPVVGLAYPLMALTQ*TEVGARFGHVTDAD Trigger: GTCTGCATCTGTCACGTGACCGAACCTGGCACCTACTTCGGTCCACTGTGTGAGTGCCATGAGTGGATATGCGAGACCTACGACGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 90 bp | TGGTTGGGTACTGACAAGCTTCCCCAGACCATCCCACATCACACTTaGACTTGCCGCAGTCACAATTACCGTGGCCTGCACAGGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLGTDKLPQTIPHHT*TCRSHNYRGLHRFS Trigger: GGAAAACCTGTGCAGGCCACGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATGTGGGATGGTCTGGGGAAGCTTGTCAGTACCCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGATCAGAACTACCCTGGCACTTCTTGGTGCTCTCCTCAGCTGACAATGGGCAGCCAATGTGTCCTTaGCCTTGGCCTCCACATACT | + |
|
Preference number: 5 (lower is better) Translates to: GRSELPWHFLVLSSADNGQPMCP*PWPPHT Trigger: AGTATGTGGAGGCCAAGGCAAAGGACACATTGGCTG...CCCATTGTCAGCTGAGGAGAGCACCAAGAAGTGCCAGGGTAGTTCTGATCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS TCA 90 bp | CTTTGCCATCTGGAGATGTGCATCTTCGCTTGCTTTCCCATGGGGTaGTGTCACACTGGAACTCGCATTTATCGCCATGCCAACCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCHLEMCIFACFPMG*CHTGTRIYRHANQP Trigger: AGGCTGGTTGGCATGGCGATAAATGCGAGTTCCAGTGTGACATCACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCATCTGCCACATTCGCATCTGCCCCTTCCAGAGCAAGGAAGATCAGAAAATGTGTCCTTTGCCTaGGCCTCCACATACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVHLPHSHLPLPEQGRSENVSFA*ASTYFF Trigger: GAAGAAGTATGTGGAGGCCAAGGCAAAGGACACATT...TTCTGATCTTCCTTGCTCTGGAAGGGGCAGATGCGAATGTGGCAGATGCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCCTCCCCAGTCCCCAGTaGGATCAACATCATGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLLPSPQ*DQHHGK Trigger: CTTGCCATGATGTTGATCCAACTGGGGACTGGGGAG...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
||
| CDS CCA 90 bp | TTCACCACATACACATGTTCCTCTGTTGCTACAGACTTTGCCATCTaGAGATGTGCATCTTCGCTTGCTTTCCCATGGGGTGATGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FTTYTCSSVATDFAI*RCASSLAFPWGDVT Trigger: TGTGACATCACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTATGTGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCGATGTGCATCTTCGCTaGCTTTCCCATGGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLDVHLR*LSHGVM Trigger: CATCACCCCATGGGAAAGCAAGCGAAGATGCACATC...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCACATCACACTTGCACTaGCCGCAGTCACAATTACCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLTSHLH*PQSQLP Trigger: CGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATGT...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS TCA 90 bp | ATGAGTCCATGTCCATCTGAATTATCACACTTACACCTGCCACAGTaGCATGTACCTGCATTGGAGCAGATGACATCTTGGGAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MSPCPSELSHLHLPQ*HVPALEQMTSWEFL Trigger: CAAGAACTCCCAAGATGTCATCTGCTCCAATGCAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATAATTCAGATGGACATGGACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCCACAAGCTGTTTATGTATGGCCTGAGAGTTCAGGGTAGATTTTATTTAGGAGCAGATGACATCTaGGGAGTTCTTGCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAHKLFMYGLRVQGRFYLGADDI*GVLAHL Trigger: CAGATGTGCAAGAACTCCCAAGATGTCATCTGCTCC...TAAATAAAATCTACCCTGAACTCTCAGGCCATACATAAACAGCTTGTGGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTCTCCCCAGTCCCCAGTaGGATCAACATCATGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDIVKCLRGCKIALFILPSPQ*DQHHGK Trigger: CTTGCCATGATGTTGATCCAACTGGGGACTGGGGAG...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCACAATGGGCAATTCCTaGGGTGCTCACATTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLTMGNS*GAHISS Trigger: GGAAGAAATGTGAGCACCCAAGGAATTGCCCATTGT...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | ACCAGCTCAGTAAGTAATAGATATACGACCAGTATGTCTGGGTCCCCTAATCTCACACATGTTCCTCTGTaGCTACAGACTTTGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSNRYTTSMSGSPNLTHVPL*LQTLPS Trigger: AGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGT...GAGATTAGGGGACCCAGACATACTGGTCGTATATCTATTACTTACTGAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS-3UTR CAA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTACACTTCCGCAGGTGTaGGCAGAGCTTACCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPTLPQV*AELTKP Trigger: TGGTTTGGTAAGCTCTGCCAACACCTGCGGAAGTGT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | GTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTTGTGAAACACTTCCGCAGGTGTaGGCAGAGCTTACCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VDIVKCLRGCKIALFICETLPQV*AELTKP Trigger: TGGTTTGGTAAGCTCTGCCAACACCTGCGGAAGTGT...TTCACAAATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTACATCACACTTGCACTaGCCGCAGTCACAATTACCG | + |
|
Preference number: 5 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPTSHLH*PQSQLP Trigger: CGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATGT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACATTGTCAAATGTCTTAGGGGTTGCAAAATTGCCCTCTTCATTGGAGCAGATGACATCTaGGGAGTTCTTGCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDIVKCLRGCKIALFIGADDI*GVLAHL Trigger: CAGATGTGCAAGAACTCCCAAGATGTCATCTGCTCC...AATGAAGAGGGCAATTTTGCAACCCCTAAGACATTTGACAATGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS-3UTR CAA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTACAATGGGCAATTCCTaGGGTGCTCACATTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPTMGNS*GAHISS Trigger: GGAAGAAATGTGAGCACCCAAGGAATTGCCCATTGT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | TCCAATGTCTTAAACTCTATTCTGAGAACCCCTAAATGGTCAGGGTATTGCAACATGAGACCATCGTGTTaGTCACAGTCTCTGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SNVLNSILRTPKWSGYCNMRPSC*SQSLSS Trigger: TGATGACAGAGACTGTGACAAACACGATGGTCTCAT...GTTGCAATACCCTGACCATTTAGGGGTTCTCAGAATAGAGTTTAAGACATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTGTCCTAGTGCTGTGTAATATGCTTTCCTCTGAATTTCTAAAATGGCCTATGAGACCATCGTGTTaGTCACAGTCTCTGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVLVLCNMLSSEFLKWPMRPSC*SQSLSS Trigger: TGATGACAGAGACTGTGACAAACACGATGGTCTCAT...AGGCCATTTTAGAAATTCAGAGGAAAGCATATTACACAGCACTAGGACAGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 |
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| CDS TCA 90 bp | ATCATCACATTCACAAAATTTACCATAAATGAGTCCATGTCCATCTaGATTATCACACTTACACCTGCCACAGTGACATGTACCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IITFTKFTINESMSI*IITLTPATVTCTCI Trigger: AATGCAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATAATTCAGATGGACATGGACTCATTTATGGTAAATTTTGTGAATGTGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS TCA 90 bp | CATCTATGCATTCTCTATCATCACATTCACAAAATTTACCATAAATaGGTCCATGTCCATCTGAATTATCACACTTACACCTGCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLCILYHHIHKIYHK*VHVHLNYHTYTCHS Trigger: ACTGTGGCAGGTGTAAGTGTGATAATTCAGATGGACATGGACTCATTTATGGTAAATTTTGTGAATGTGATGATAGAGAATGCATAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS GCA 72 bp | GGGCTGCCCAGGTGCACGACATCTGCGTTCGGACTCTaGCCGGGACAGCCTGCAGGGGGCGCCCGACAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPRCTTSAFGL*PGQPAGGARQA Trigger: AGCCTGTCGGGCGCCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 72 bp | GAGCGCTCCCTGGGGGCTGCCCAGGTGCACGACATCTaGGTTCGGACTCTGCCCGGGACAGCCTGCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERSLGAAQVHDI*VRTLPGTACRG Trigger: CCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 72 bp | CGGCCACGGTCATGGCACAGAGCGCTCCCTGGGGGCTaGCCAGGTGCACGACATCTGCGTTCGGACTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPRSWHRALPGG*PGARHLRSDSA Trigger: GGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS CCA 72 bp | CTCGCACCGGCCACGGTCATGGCACAGAGCGCTCCCTaGGGGCTGCCCAGGTGCACGACATCTGCGTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LAPATVMAQSAP*GLPRCTTSAFG Trigger: TCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTGCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS CCA 72 bp | CAGATGCAGACCCCACACTCGCACCGGCCACGGTCATaGCACAGAGCGCTCCCTGGGGGCTGCCCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QMQTPHSHRPRS*HRALPGGCPGA Trigger: TGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGACCGTGGCCGGTGCGAGTGTGGGGTCTGCATCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 72 bp | GTCATGGCACAGAGCGCTCCCTGGGGGCTGCCCAGGTaGACGACATCTGCGTTCGGACTCTGCCCGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VMAQSAPWGLPR*TTSAFGLCPGQ Trigger: CTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTGCACCTGGGCAGCCCCCAGGGAGCGCTCTGTGCCATGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 72 bp | CACGACATCTGCGTTCGGACTCTGCCCGGGACAGCCTaGAGGGGGCGCCCGACAGGCTTCTCAGAGATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HDICVRTLPGTA*RGRPTGFSEMV Trigger: TACCATCTCTGAGAAGCCTGTCGGGCGCCCCCTGCAGGCTGTCCCGGGCAGAGTCCGAACGCAGATGTCGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS TCA 72 bp | GCGCCCGACAGGCTTCTCAGAGATGGTAAGAAGCTTTaGGGAGCAGCTGACAGCCCAATGAAGAGAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: APDRLLRDGKKL*GAADSPMKRRE Trigger: CTCCCTTCTCTTCATTGGGCTGTCAGCTGCTCCTCAAAGCTTCTTACCATCTCTGAGAAGCCTGTCGGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS GCA 72 bp | ACTGACAAGCTTCCCCAGACCATCCCACATCACACTTaGACTTGCCGCAGTCACAATTACCGTGGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TDKLPQTIPHHT*TCRSHNYRGLH Trigger: GTGCAGGCCACGGTAATTGTGACTGCGGCAAGTGCAAGTGTGATGTGGGATGGTCTGGGGAAGCTTGTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
||
| CDS CCA 72 bp | GTAGGTCTCGCATATCCACTCATGGCACTCACACAGTaGACCGAAGTAGGTGCCAGGTTCGGTCACGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: VGLAYPLMALTQ*TEVGARFGHVT Trigger: TGTCACGTGACCGAACCTGGCACCTACTTCGGTCCACTGTGTGAGTGCCATGAGTGGATATGCGAGACCTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049681.14 ENSMUST00000142161.8 |
||
| CDS TCA 72 bp | CTGGAGATGTGCATCTTCGCTTGCTTTCCCATGGGGTaGTGTCACACTGGAACTCGCATTTATCGCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEMCIFACFPMG*CHTGTRIYRHA Trigger: GGCATGGCGATAAATGCGAGTTCCAGTGTGACATCACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
||
| CDS CCA 72 bp | CATCTTCGCTTGCTTTCCCATGGGGTGATGTCACACTaGAACTCGCATTTATCGCCATGCCAACCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HLRLLSHGVMSH*NSHLSPCQPAS Trigger: TGAGGCTGGTTGGCATGGCGATAAATGCGAGTTCCAGTGTGACATCACCCCATGGGAAAGCAAGCGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CAA 72 bp | CTACAGACTTTGCCATCTGGAGATGTGCATCTTCGCTaGCTTTCCCATGGGGTGATGTCACACTGGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: LQTLPSGDVHLR*LSHGVMSHWNS Trigger: CGAGTTCCAGTGTGACATCACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CAA 90 bp | CCTCTGTTGCTACAGACTTTGCCATCTGGAGATGTGCATCTTCGCTaGCTTTCCCATGGGGTGATGTCACACTGGAACTCGCATTTATCG | + |
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Preference number: 6 (lower is better) Translates to: PLLLQTLPSGDVHLR*LSHGVMSHWNSHLS Trigger: CGATAAATGCGAGTTCCAGTGTGACATCACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS GCA 72 bp | CACCACATACACATGTTCCTCTGTTGCTACAGACTTTaGCATCTGGAGATGTGCATCTTCGCTTGCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HHIHMFLCCYRL*HLEMCIFACFP Trigger: GGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTATGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CCA 72 bp | TACACATGTTCCTCTGTTGCTACAGACTTTGCCATCTaGAGATGTGCATCTTCGCTTGCTTTCCCATGGGGT | + |
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Preference number: 6 (lower is better) Translates to: YTCSSVATDFAI*RCASSLAFPWG Trigger: ACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CAA 90 bp | CAAGAACATTCACCACATACACATGTTCCTCTGTTGCTACAGACTTaGCCATCTGGAGATGTGCATCTTCGCTTGCTTTCCCATGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QEHSPHTHVPLLLQT*PSGDVHLRLLSHGV Trigger: CACCCCATGGGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTATGTGGTGAATGTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CAA 72 bp | TCACCACATACACATGTTCCTCTGTTGCTACAGACTTaGCCATCTGGAGATGTGCATCTTCGCTTGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPHTHVPLLLQT*PSGDVHLRLLS Trigger: GGAAAGCAAGCGAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTATGTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS GCA 72 bp | ATTATCACACTTACACCTGCCACAGTGACATGTACCTaGATTGGAGCAGATGACATCTTGGGAGTTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: IITLTPATVTCT*IGADDILGVLA Trigger: TGCAAGAACTCCCAAGATGTCATCTGCTCCAATGCAGGTACATGTCACTGTGGCAGGTGTAAGTGTGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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| CDS GCA 72 bp | GGCAAGAACATTCACCACATACACATGTTCCTCTGTTaGTACAGACTTTGCCATCTGGAGATGTGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: GKNIHHIHMFLC*YRLCHLEMCIF Trigger: GAAGATGCACATCTCCAGATGGCAAAGTCTGTAGCAACAGAGGAACATGTGTATGTGGTGAATGTTCTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049681.14 |
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| CDS CCA 72 bp | ATTATACAAATAAGGCAGCCAATGTGTCCTTTGCCTTaGCCTCCACATACTTCTTCTGTTTCATCATCTATG | + |
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Preference number: 6 (lower is better) Translates to: IIQIRQPMCPLP*PPHTSSVSSSM Trigger: CATAGATGATGAAACAGAAGAAGTATGTGGAGGCCAAGGCAAAGGACACATTGGCTGCCTTATTTGTATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142161.8 |
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| CDS TCA 72 bp | TTCACAAAATTTACCATAAATGAGTCCATGTCCATCTaGATTATCACACTTACACCTGCCACAGTGACATGT | + |
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Preference number: 6 (lower is better) Translates to: FTKFTINESMSI*IITLTPATVTC Trigger: ACATGTCACTGTGGCAGGTGTAAGTGTGATAATTCAGATGGACATGGACTCATTTATGGTAAATTTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049681.14 ENSMUST00000132026.2 ENSMUST00000142161.8 |
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