Pregenerated sensors for ITGB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001281Ensembl transcript IDs: ENSMUST00000001327.11, ENSMUST00000127014.3, ENSMUST00000229440.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTaGCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PSEGHSEKSQRWQHL*LTDAALPFYLHCPP Trigger: TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAATTGCCTGACAGACGCTaGCCTGCCCTTCTATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DQPFVWWEWLLPSEGHSELPDRR*PALLSP Trigger: TGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAA...TTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR CCA 72 bp | CTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTaGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPSEGHSEKSQR*QHLCLTDAALP Trigger: GGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR GCA 72 bp | ATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGCTaGCCTGCCCTTCTATCTCCACTGTCCTCCAAGACA | + |
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Preference number: 3 (lower is better) Translates to: ISAVAASLPDRR*PALLSPLSSKT Trigger: TGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR GCA 72 bp | GGAAGGACCAGCCCTTCGTGTGGTGGGAATGGCTGCTaGCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: GRTSPSCGGNGC*PLKVTLKNLSG Trigger: ACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR GCA 72 bp | TATGGAAGGACCAGCCCTTCGTGTGGTGGGAATGGCTaGTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: YGRTSPSCGGNG*CPLKVTLKNLS Trigger: GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTTCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR CCA 72 bp | GGCAAAGCTTTATTATGGAAGGACCAGCCCTTCGTGTaGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: GKALLWKDQPFV*WEWLLPSEGHS Trigger: AGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTTCCATAATAAAGCTTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR CCA 72 bp | AAAGCTTTATTATGGAAGGACCAGCCCTTCGTGTGGTaGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: KALLWKDQPFVW*EWLLPSEGHSE Trigger: TTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTTCCATAATAAAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| 3UTR CCA 72 bp | TTATTATGGAAGGACCAGCCCTTCGTGTGGTGGGAATaGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCT | + |
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Preference number: 3 (lower is better) Translates to: LLWKDQPFVWWE*LLPSEGHSEKS Trigger: AGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTTCCATAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR GCA 90 bp | GAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATGTGACGCGGATCCGCTaGGGGGCCAGCTGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: EWLLPSEGHSEKSQRWQHVTRIR*GASWVA Trigger: GGCCACCCAGCTGGCCCCGCAGCGGATCCGCGTCAC...ATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAGACGCCCAGAGCTCTaGCCACTGCAGCTGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: DQPFVWWEWLLPSEGHSERRPEL*PLQLQR Trigger: ACGCTGCAGCTGCAGTGGGCAGAGCTCTGGGCGTCT...TTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | TGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAACGCGATCTCCCTGGCTaGGCGGCTTGTCCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CLTDAALPFYLHCPPRQERDLPG*AACPAA Trigger: TGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCG...TTCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | CTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAATCCCTGGGGCATGGGTGGTaGAGCTTGGAGGGCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LTDAALPFYLHCPPRQESLGHGW*SLEGTV Trigger: CACCGTGCCCTCCAAGCTTCACCACCCATGCCCCAG...GGATTCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAATCCCTGAGCGGCTTGTCCTaGAGCACCTCCTGGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LTDAALPFYLHCPPRQESLSGLS*STSWRP Trigger: AGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAG...GGATTCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCCTGACCAGCAGGGCATaGCCTAGCTGGCGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: GGNGCCPLKVTLKNLSGGLTSRA*PSWRTR Trigger: ACGTGTGCGCCAGCTAGGGCATGCCCTGCTGGTCAG...GCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCGCTTGGAGGGCACGGTaGTTACAAAGGGCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: AASLPDRRCPALLSPLSSAWRAR*LQRAAP Trigger: CGGTGCTGCCCTTTGTAAGCACCGTGCCCTCCAAGC...GGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GTGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCTGCCCACTGCAGCTaGAGCGTCCACATTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: VAASLPDRRCPALLSPLSSAHCS*SVHIGI Trigger: GATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGA...GGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGGTCCCACTGCCACGATaGCCCCTGTGCAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: WEWLLPSEGHSEKSQRWQVPLPR*PLCSPV Trigger: TACTGGGCTGCACAGGGGGCATCGTGGCAGTGGGAC...CTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCTGGCAGGAAGGAACTaGCTGGCAGGATCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WQHLCLTDAALPFYLHCPLAGRN*LAGSLQ Trigger: CTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAG...AGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTCCTGCAGCACCTCCTaGCGGCCTCTCGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPLKVTLKNLSGGSIFASCSTS*RPLGSS Trigger: AGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGA...GGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | AATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTCGCCGCGATCTCCCTaGCTGAGCGGCTTGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: NGCCPLKVTLKNLSGGSISPRSP*LSGLSC Trigger: GCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGA...GATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCAGTCGGCTGGGGCATaGGTGGTGAAGCTTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEWLLPSEGHSEKSQRWQQSAGA*VVKLGG Trigger: CCCTCCAAGCTTCACCACCCATGCCCCAGCCGACTG...CTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCACTGCAGCGTCCACATTaGCATCGACCCTTCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: QHLCLTDAALPFYLHCPPLQRPH*HRPFPL Trigger: CAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAG...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | AAGGACCAGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGTCAGTCTGCTTCCCTaGTCAGAGAGAGGGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: KDQPFVWWEWLLPSEGHSVSLLP*SERGMA Trigger: CGCCATCCCTCTCTCTGACCAGGGAAGCAGACTGAC...AGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229440.2 |
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| CDS-3UTR TCA 90 bp | TCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCTCTCTCTCGAAGGCTTaGGCGTCCCCGGTGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SCGGNGCCPLKVTLKNLSSLSKA*ASPVRD Trigger: GTCCCTCACCGGGGACGCTCAAGCCTTCGAGAGAGA...GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAGGATATTCGCTGCAGTaGGGGCCTGGGCTACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: QHLCLTDAALPFYLHCPPGYSLQ*GPGLLD Trigger: GTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCC...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGGAATGTGTGACCTCCTaGAGCCTGACCAGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ASLPDRRCPALLSPLSSKECVTS*SLTSRA Trigger: TGCCCTGCTGGTCAGGCTGCAGGAGGTCACACATTC...CTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGCAGAGCTCTGCCCACTaGAGCTGCAGCGTCCACATT | + |
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Preference number: 4 (lower is better) Translates to: ASLPDRRCPALLSPLSSKQSSAH*SCSVHI Trigger: AATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTG...CTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCGGCAACGGTTGCATTTaGAGTATCCGTGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: AASLPDRRCPALLSPLSSGNGCI*SIRAHC Trigger: GCAGTGGGCACGGATACTGCAAATGCAACCGTTGCC...GGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GACCAGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAGCTCACATGGTGACTTaGAGCCTAGGCACTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: DQPFVWWEWLLPSEGHSEAHMVT*SLGTGH Trigger: GTGACCAGTGCCTAGGCTGCAAGTCACCATGTGAGC...TTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | GCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGCAGGAAGGAACTGGCTaGCAGGATCCCTGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ASLPDRRCPALLSPLSSKQEGTG*QDPCRD Trigger: GTCTCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTG...CTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGCTGCCCTGAACGCTCCAGTCGGCTaGGGCATGGGTGGTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: HSEKSQRWQHLCLTDAALNAPVG*GMGGEA Trigger: AGCTTCACCACCCATGCCCCAGCCGACTGGAGCGTT...CAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGAAAGCCGCCTTCGGGTaGGTCCAGGTTGCCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LPSEGHSEKSQRWQHLCLKAAFG*VQVARD Trigger: GTCTCTGGCAACCTGGACTCACCCGAAGGCGGCTTT...CAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | AGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATGGCTGGCAGGATCCCTaGAGAGACAGGTCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SPSCGGNGCCPLKVTLKNGWQDP*RDRSGS Trigger: GGATCCTGACCTGTCTCTGCAGGGATCCTGCCAGCC...ATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCTGGCAGAGGGCAGCCTaGAAAATGGCATCAAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGNGCCPLKVTLKNLSGGWQRAA*KMASKP Trigger: CGGCTTTGATGCCATTTTGCAGGCTGCCCTCTGCCA...GCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTGGCCAGGGGCACAGCTaGATATCCCGCACTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PFVWWEWLLPSEGHSEKSGQGHS*ISRTEG Trigger: ACCTTCAGTGCGGGATATGCAGCTGTGCCCCTGGCC...AGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAACTCCACACTGGCAGTaGCCAAAGCCTCCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPDRRCPALLSPLSSKTRTPHWQ*PKPPQR Trigger: CCTCTGTGGAGGCTTTGGCCACTGCCAGTGTGGAGT...TCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTAGGATCCTCCCATTCTaGGGCCTCCCCAGAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: CGGNGCCPLKVTLKNLSGRILPF*GLPRGC Trigger: ACATCCTCTGGGGAGGCCGCAGAATGGGAGGATCCT...ACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCCGGGTGAGTCCAGGTTaGCAGAGACATTCTGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: SCGGNGCCPLKVTLKNLSRVSPG*QRHSGV Trigger: GACGCCAGAATGTCTCTGGCAACCTGGACTCACCCG...GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAATCCCATTTGCAGTATCCGTaGCCACTGCAGAGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTDAALPFYLHCPPRQESHLQYP*PLQSPP Trigger: AGGAGGGCTCTGCAGTGGGCACGGATACTGCAAATG...GGATTCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAAATGCCCCGCACTCTaGACAATCCCTGTACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GGNGCCPLKVTLKNLSGGKCPAL*TIPVLL Trigger: GAGCAGTACAGGGATTGTGCAGAGTGCGGGGCATTT...GCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCACAGTTGAGTTGCTGCTaGTCCTTCTCAAAGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QHLCLTDAALPFYLHCPPQLSCC*SFSKRL Trigger: CAGGCGCTTTGAGAAGGAGCAGCAGCAACTCAACTG...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGAGACTCCTGGTGGGAGTaGAGAGTGCTCAAGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HLCLTDAALPFYLHCPPRDSWWE*RVLKSH Trigger: GTGACTCTTGAGCACTCTCCACTCCCACCAGGAGTC...TCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | AATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCGGAGATGCTGACTCCTaGTGGGAGTGGAGAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NGCCPLKVTLKNLSGGSIGDADS*WEWRVL Trigger: GAGCACTCTCCACTCCCACCAGGAGTCAGCATCTCC...GATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCGTGAAAGCTGAAGGGTaGCTGACAACGCTCCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: CCPLKVTLKNLSGGSIFAVKAEG*LTTLQS Trigger: CGACTGGAGCGTTGTCAGCCACCCTTCAGCTTTCAC...GGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGCAGCCAATCTGTTCCTaGCAGAGGGCAGCCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LPSEGHSEKSQRWQHLCLQPICS*QRAACK Trigger: TTTGCAGGCTGCCCTCTGCCAGGAACAGATTGGCTG...CAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | AATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCGATGCTGACTCCTGGTaGGAGTGGAGAGTGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGCCPLKVTLKNLSGGSIDADSW*EWRVLK Trigger: CTTGAGCACTCTCCACTCCCACCAGGAGTCAGCATC...GATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | CATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGATGCACAGCTGGGATGTaGGAGAATACACTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLCLTDAALPFYLHCPPRCTAGM*ENTLLA Trigger: TGCCAGAAGTGTATTCTCTCACATCCCAGCTGTGCA...TCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | TTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAAACTGTCTCAGCTCCTaGTACACAGGCAGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPDRRCPALLSPLSSKTRNCLSS*YTGSVA Trigger: TGCAACACTGCCTGTGTATCAGGAGCTGAGACAGTT...TCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGAGGTTGGATATTCGCTaGAGTGAGGGCCTGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FVWWEWLLPSEGHSEKSQRLDIR*SEGLGY Trigger: GTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCT...CTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCGGTGGGAGTGGAGAGTaGTCAAGAGTCACAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCPLKVTLKNLSGGSIFAGGSGE*SRVTVD Trigger: ATCCACTGTGACTCTTGAGCACTCTCCACTCCCACC...GGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | AGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCAGTCGCACACTGTGTaGAGCTCCACAGTTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSCGGNGCCPLKVTLKNQSHTV*SSTVNS Trigger: GGAGTTAACTGTGGAGCTGCACACAGTGTGCGACTG...ATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACAGCCTCCACAGAGGATaGCCTCATGTCGCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGHSEKSQRWQHLCLTDSLHRG*PHVAHS Trigger: GCTGTGAGCGACATGAGGGCATCCTCTGTGGAGGCT...GTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCATGCTTCCAGTTGAGTTaGTGCTGCTCCTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLCLTDAALPFYLHCPPCFQLS*CCSFSK Trigger: CTTTGAGAAGGAGCAGCAGCAACTCAACTGGAAGCA...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTAGAGGATTGTTGTCCTaGTTCCAGTTGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQHLCLTDAALPFYLHCPRGLLS*FQLSCC Trigger: GCAGCAACTCAACTGGAAGCAGGACAACAATCCTCT...AGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | GCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCACAGCAAAGATAGGTTaGATATTCGCTGCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AASLPDRRCPALLSPLSSTAKIG*IFAAVR Trigger: CCTCACTGCAGCGAATATCCAACCTATCTTTGCTGT...GGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCCCCCGACAGCAGACTTaGGAATCAACTGTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCGGNGCCPLKVTLKNLSPRQQT*ESTVSA Trigger: AGCTGAGACAGTTGATTCCCAAGTCTGCTGTCGGGG...GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | AGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCATGTCGCTCACAGCTaGCATCATCACACTCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPSCGGNGCCPLKVTLKNHVAHS*HHHTRT Trigger: TGTGCGAGTGTGATGATGCCAGCTGTGAGCGACATG...ATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | GAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATTCCACTCCCTTCTCTTaGGGTCTCACTCTCAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: EWLLPSEGHSEKSQRWQHSTPFS*GLTLST Trigger: CGTACTGAGAGTGAGACCCCAAGAGAAGGGAGTGGA...ATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | GGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCATGTATCGTCTGAAGTaGACACTAGAAGACGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGNGCCPLKVTLKNLSGGMYRLK*TLEDGR Trigger: TCTCCCGTCTTCTAGTGTTCACTTCAGACGATACAT...GCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | GGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGCTGCCATACACAGGCAGTGTTaGACCGGTGACAGCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHSEKSQRWQHLCLTDAAIHRQC*TGDSKD Trigger: ATCTTTGCTGTCACCGGTGCAACACTGCCTGTGTAT...GGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCCATCCCCAGCTGTGTaGAATGTATCGTCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFVWWEWLLPSEGHSEKSPSPAV*NVSSEV Trigger: CACTTCAGACGATACATTCCACACAGCTGGGGATGG...AGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACCTCTGCCGGTGTGGTTaGCGTGACAGTGACATACTC | + |
|
Preference number: 4 (lower is better) Translates to: SEGHSEKSQRWQHLCLTDLCRCG*RDSDIL Trigger: GAGTATGTCACTGTCACGCCAACCACACCGGCAGAG...GTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | TTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGACAAGAGATTGTTGTCTCTCTTaGGGTCTCACTCTCAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: LPDRRCPALLSPLSSKTRDCCLS*GLTLST Trigger: CGTACTGAGAGTGAGACCCCAAGAGAGACAACAATC...TCTTGTCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229440.2 |
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| CDS-3UTR TCA 90 bp | TCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCCAAGTCGTCCTTCATTaGGTAGCTCAGGTCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCGGNGCCPLKVTLKNLSQVVLH*VAQVHK Trigger: CTTATGGACCTGAGCTACTCAATGAAGGACGACTTG...GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | TGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCTATTGTCCTTTCTTTaGACCAGCCATCATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQHLCLTDAALPFYLHCPLLSFL*TSHHPS Trigger: ACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAG...AGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCCAGAAATCCACCGTCTaGTTGACTCGGACATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CCPLKVTLKNLSGGSIFAQKSTV*LTRTSL Trigger: CAATGATGTCCGAGTCAACCAGACGGTGGATTTCTG...GGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR GCA 90 bp | CACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCTATTGTCCTTTCTTTaGACCAGCCATCATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSEKSQRWQHLCLTDAALLLSFL*TSHHPS Trigger: ACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAG...CAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACTTCCAGTTGAGTTGCTaGTGCTCCTTCTCAAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGHSEKSQRWQHLCLTDFQLSC*CSFSKR Trigger: GCGCTTTGAGAAGGAGCAGCAGCAACTCAACTGGAA...GTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CCA 90 bp | CCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACATGCACCATGCACAGCTaGGATGTGAGAGAATACACT | + |
|
Preference number: 4 (lower is better) Translates to: PSEGHSEKSQRWQHLCLTCTMHS*DVREYT Trigger: AGTGTATTCTCTCACATCCCAGCTGTGCATGGTGCA...TGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGAACCAGCAGAAAAATaGGAACAGTTGATGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGHSEKSQRWQHLCLTDEPAEK*EQLMNP Trigger: TGGATTCATCAACTGTTCTCATTTTTCTGCTGGTTC...GTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 90 bp | GCTGCGGGGCCAGCTGGGTGGCCCCCTCGCCGCGATCTCCCTGGCTaGGCGGCTTGTCCTGCAGCACCTCCTGGCGGCCTCTCGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGPAGWPPRRDLPG*AACPAAPPGGLSAP Trigger: AGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGGCCCCGCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | ATCCGCTGCGGGGCCAGCTGGGTGGCCCCCTCGCCGCGATCTCCCTaGCTGAGCGGCTTGTCCTGCAGCACCTCCTGGCGGCCTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRCGASWVAPSPRSP*LSGLSCSTSWRPLG Trigger: GCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGGCCCCGCAGCGGAT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | TGGGTGGCCCCCTCGCCGCGATCTCCCTGGCTGAGCGGCTTGTCCTaGAGCACCTCCTGGCGGCCTCTCGGCTCCTCTAGCTCCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: WVAPSPRSPWLSGLS*STSWRPLGSSSSCA Trigger: CGCGCAGGAGCTAGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | TCGCCGCGATCTCCCTGGCTGAGCGGCTTGTCCTGCAGCACCTCCTaGCGGCCTCTCGGCTCCTCTAGCTCCTGCGCGGGGCACCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRSPWLSGLSCSTS*RPLGSSSSCAGHPR Trigger: TCGCGGGTGCCCCGCGCAGGAGCTAGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | GCCCACTGCAGCTGCAGCGTCCACATTGGCATCGACCCTTCCCGCTaGATAGGGGCCCTGTCCCGTTTGGGGCCCGGCAACCAGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHCSCSVHIGIDPSR*IGALSRLGPGNQIP Trigger: TGGAATCTGGTTGCCGGGCCCCAAACGGGACAGGGCCCCTATGCAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | CACAGACGCCCAGAGCTCTGCCCACTGCAGCTGCAGCGTCCACATTaGCATCGACCCTTCCCGCTGCATAGGGGCCCTGTCCCGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRRPELCPLQLQRPH*HRPFPLHRGPVPFG Trigger: CCCAAACGGGACAGGGCCCCTATGCAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTGGGCGTCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | CGCTCACAGCTGGCATCATCACACTCGCACAGACGCCCAGAGCTCTaGCCACTGCAGCTGCAGCGTCCACATTGGCATCGACCCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSQLASSHSHRRPEL*PLQLQRPHWHRPFP Trigger: CGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTGGGCGTCTGTGCGAGTGTGATGATGCCAGCTGTGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 90 bp | CCAGCCCTAGTCCCACTGCCACGATGCCCCCTGTGCAGCCCAGTATaGTGGCACGGGTGTGATCCACTCCCTTCTCTTGGGGTCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PALVPLPRCPLCSPV*WHGCDPLPSLGVSL Trigger: GAGTGAGACCCCAAGAGAAGGGAGTGGATCACACCCGTGCCATCATACTGGGCTGCACAGGGGGCATCGTGGCAGTGGGACTAGGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | TTGAGCGTCCCCGGTGAGGGACAGCACGTGGTGAAAGCTGAAGGGTaGCTGACAACGCTCCAGTCGGCTGGGGCATGGGTGGTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVPGEGQHVVKAEG*LTTLQSAGAWVVKL Trigger: AAGCTTCACCACCCATGCCCCAGCCGACTGGAGCGTTGTCAGCCACCCTTCAGCTTTCACCACGTGCTGTCCCTCACCGGGGACGCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | GGGCACAGCTGCATATCCCGCACTGAAGGTCCCCCTGTCCATCACTaGAGTAGGGAGCGTGAGGCTGGGCATCACCACAGTTACAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSCISRTEGPPVHH*SREREAGHHHSYSR Trigger: GCGACTGTAACTGTGGTGATGCCCAGCCTCACGCTCCCTACTGCAGTGATGGACAGGGGGACCTTCAGTGCGGGATATGCAGCTGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | AGCTGGCATCATCACACTCGCACAGACGCCCAGAGCTCTGCCCACTaGAGCTGCAGCGTCCACATTGGCATCGACCCTTCCCGCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SWHHHTRTDAQSSAH*SCSVHIGIDPSRCI Trigger: TATGCAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTGGGCGTCTGTGCGAGTGTGATGATGCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | GTGAAAGCTGAAGGGTGGCTGACAACGCTCCAGTCGGCTGGGGCATaGGTGGTGAAGCTTGGAGGGCACGGTGCTTACAAAGGGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKAEGWLTTLQSAGA*VVKLGGHGAYKGQH Trigger: GTGCTGCCCTTTGTAAGCACCGTGCCCTCCAAGCTTCACCACCCATGCCCCAGCCGACTGGAGCGTTGTCAGCCACCCTTCAGCTTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | AGTGGCCAAAGCCTCCACAGAGGATGCCCTCATGTCGCTCACAGCTaGCATCATCACACTCGCACAGACGCCCAGAGCTCTGCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGQSLHRGCPHVAHS*HHHTRTDAQSSAHC Trigger: GCAGTGGGCAGAGCTCTGGGCGTCTGTGCGAGTGTGATGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGTGGAGGCTTTGGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | TCCACGAAGGAGCCAAAACCTATGCGCACAGAATGTGTGACCTCCTaGAGCCTGACCAGCAGGGCATGCCCTAGCTGGCGCACACGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STKEPKPMRTECVTS*SLTSRACPSWRTRS Trigger: GGAACGTGTGCGCCAGCTAGGGCATGCCCTGCTGGTCAGGCTGCAGGAGGTCACACATTCTGTGCGCATAGGTTTTGGCTCCTTCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | CCTCAGAGCATTCACACAGCTGACCAAGACGGCCAGGGGCACAGCTaGATATCCCGCACTGAAGGTCCCCCTGTCCATCACTGCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQSIHTADQDGQGHS*ISRTEGPPVHHCSR Trigger: CCTACTGCAGTGATGGACAGGGGGACCTTCAGTGCGGGATATGCAGCTGTGCCCCTGGCCGTCTTGGTCAGCTGTGTGAATGCTCTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAGCTGCAGCGTCCACATaGGCATCGACCCTTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QHLCLTDAALPFYLHCPPAAAST*ASTLPA Trigger: AGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGC...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | GAGAGAATACACTTCTGGCAGGAAGGAACTGGCTGGCAGGATCCCTaGAGAGACAGGTCAGGATCCTCCCATTCTGCGGCCTCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERIHFWQEGTGWQDP*RDRSGSSHSAASPE Trigger: CTCTGGGGAGGCCGCAGAATGGGAGGATCCTGACCTGTCTCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAGAAGTGTATTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS-3UTR CAA 90 bp | CAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAGAGGGCCTGGGCTACTaGACCCACAGAGGGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHLCLTDAALPFYLHCPPEGLGY*THRGIV Trigger: GACTATCCCTCTGTGGGTCAAGTAGCCCAGGCCCTC...TGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | CAGCCTGCAAAATGGCATCAAAGCCGCCTTCGGGTGAGTCCAGGTTaGCAGAGACATTCTGGCGTCCCACCTCTCTCTCGAAGGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPAKWHQSRLRVSPG*QRHSGVPPLSRRLE Trigger: CTCAAGCCTTCGAGAGAGAGGTGGGACGCCAGAATGTCTCTGGCAACCTGGACTCACCCGAAGGCGGCTTTGATGCCATTTTGCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | ATGCCCCGCACTCTGCACAATCCCTGTACTGCTCACATGGTGACTTaGAGCCTAGGCACTGGTCACACAGAGCCCCGTAGTAGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: MPRTLHNPCTAHMVT*SLGTGHTEPRSSHP Trigger: TGGATGGCTACTACGGGGCTCTGTGTGACCAGTGCCTAGGCTGCAAGTCACCATGTGAGCAGTACAGGGATTGTGCAGAGTGCGGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS GCA 90 bp | GGTCAAGGTCACATTCACGTCAGCACAGACCACACTACAGTTGGCTaGCAGGGGACCGGTACCAAATGCCCCGCACTCTGCACAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQGHIHVSTDHTTVG*QGTGTKCPALCTIP Trigger: AGGGATTGTGCAGAGTGCGGGGCATTTGGTACCGGTCCCCTGGCAGCCAACTGTAGTGTGGTCTGTGCTGACGTGAATGTGACCTTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS CCA 90 bp | AGCTGTCTACACTCTTGCTGCACTCGCAAGCTCTGCCGGTGTGGTTaGCGTGACAGTGACATACTCCACACTGGCAGTGGCCAAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCLHSCCTRKLCRCG*RDSDILHTGSGQSL Trigger: GAGGCTTTGGCCACTGCCAGTGTGGAGTATGTCACTGTCACGCCAACCACACCGGCAGAGCTTGCGAGTGCAGCAAGAGTGTAGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | TCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCCCTTGGAAGCGGGGGTaGACAGTGGTTGTGATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEKSQRWQHLCLTDAALPPWKRG*TVVVIA Trigger: TGCGATCACAACCACTGTCAACCCCCGCTTCCAAGG...GGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS CCA 90 bp | CAGCTGGGATGTGAGAGAATACACTTCTGGCAGGAAGGAACTGGCTaGCAGGATCCCTGCAGAGACAGGTCAGGATCCTCCCATTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLGCERIHFWQEGTG*QDPCRDRSGSSHSA Trigger: CGCAGAATGGGAGGATCCTGACCTGTCTCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAGAAGTGTATTCTCTCACATCCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS CCA 90 bp | CCAAGGTCAAGGTCACATTCACGTCAGCACAGACCACACTACAGTTaGCTGCCAGGGGACCGGTACCAAATGCCCCGCACTCTGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRSRSHSRQHRPHYS*LPGDRYQMPRTLHN Trigger: ATTGTGCAGAGTGCGGGGCATTTGGTACCGGTCCCCTGGCAGCCAACTGTAGTGTGGTCTGTGCTGACGTGAATGTGACCTTGACCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | AGGACCAGCCCTTCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGGTGAAGTTCAGTTGTTaGCACCATGCACAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTSPSCGGNGCCPLKVTLVKFSC*HHAQLG Trigger: TCCCAGCTGTGCATGGTGCAAACAACTGAACTTCAC...CAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGAAGGGCTGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | TGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCCTTGGAAGCGGGGGTaGACAGTGGTTGTGATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: WEWLLPSEGHSEKSQRWQPWKRG*TVVVIA Trigger: TGCGATCACAACCACTGTCAACCCCCGCTTCCAAGG...CTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS CCA 90 bp | CATTTCTCCAGCCAATCTGTTCCTGGCAGAGGGCAGCCTGCAAAATaGCATCAAAGCCGCCTTCGGGTGAGTCCAGGTTGCCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: HFSSQSVPGRGQPAK*HQSRLRVSPGCQRH Trigger: ATGTCTCTGGCAACCTGGACTCACCCGAAGGCGGCTTTGATGCCATTTTGCAGGCTGCCCTCTGCCAGGAACAGATTGGCTGGAGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | TCGTGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCTCCCCGACAGCAGACTaGGGAATCAACTGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCGGNGCCPLKVTLKNLSSPTAD*GINCLS Trigger: GCTGAGACAGTTGATTCCCAAGTCTGCTGTCGGGGA...GCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | CATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGAATCCACTCCCTTCTCTaGGGGTCTCACTCTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLCLTDAALPFYLHCPPRIHSLL*GSHSQY Trigger: GTACTGAGAGTGAGACCCCAAGAGAAGGGAGTGGAT...TCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | TGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGTTGTCCTGCTTCCAGTaGAGTTGCTGCTGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WWEWLLPSEGHSEKSQRWLSCFQ*SCCCSF Trigger: GAAGGAGCAGCAGCAACTCAACTGGAAGCAGGACAA...CCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | AGGCAGTGTTGCACCGGTGACAGCAAAGATAGGTTGGATATTCGCTaGAGTGAGGGCCTGGGCTACTTGACCCACAGAGGGATAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQCCTGDSKDRLDIR*SEGLGYLTHRGIVK Trigger: TTTGACTATCCCTCTGTGGGTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCTATCTTTGCTGTCACCGGTGCAACACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | CCCTTCTCTTGGGGTCTCACTCTCAGTACGATCCCGCTGGCTGCATaGTCCACCAGGAAGAAGAACAGCTGGTTGTCTATTGTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFSWGLTLSTIPLAA*STRKKNSWLSIVLS Trigger: AGAAAGGACAATAGACAACCAGCTGTTCTTCTTCCTGGTGGAGCATGCAGCCAGCGGGATCGTACTGAGAGTGAGACCCCAAGAGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS CCA 90 bp | AGTTGTTTGCACCATGCACAGCTGGGATGTGAGAGAATACACTTCTaGCAGGAAGGAACTGGCTGGCAGGATCCCTGCAGAGACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLHHAQLGCERIHF*QEGTGWQDPCRDRS Trigger: TGACCTGTCTCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAGAAGTGTATTCTCTCACATCCCAGCTGTGCATGGTGCAAACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS-3UTR CAA 90 bp | GCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGGACAGCAAAGATAGGTaGGATATTCGCTGCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLPDRRCPALLSPLSSKDSKDR*DIRCSE Trigger: CTCACTGCAGCGAATATCCAACCTATCTTTGCTGTC...CTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | GCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCTCTATTGTCCTTTCTTaGCACCAGCCATCATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AASLPDRRCPALLSPLSSSIVLS*HQPSSK Trigger: CTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGA...GGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR CAA 90 bp | TGGCAGCATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTACAGCTGGTTGTCTATaGTCCTTTCTTTGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WQHLCLTDAALPFYLHCPTAGCL*SFLCTS Trigger: GCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGT...AGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS TCA 90 bp | GCTGACTCCTGGTGGGAGTGGAGAGTGCTCAAGAGTCACAGTGGATaGCAGGCTATCATAAGCATCCATGATGAGCTGCACCACATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ADSWWEWRVLKSHSG*QAIISIHDELHHIA Trigger: AGCAATGTGGTGCAGCTCATCATGGATGCTTATGATAGCCTGTCATCCACTGTGACTCTTGAGCACTCTCCACTCCCACCAGGAGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 90 bp | TGTCTCTCTTGGGGTCTCACTCTCAGTACGATCCCGCTGGCTGCATaGTCCACCAGGAAGAAGAACAGCTGGTTGTCTATTGTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSWGLTLSTIPLAA*STRKKNSWLSIVLS Trigger: AGAAAGGACAATAGACAACCAGCTGTTCTTCTTCCTGGTGGAGCATGCAGCCAGCGGGATCGTACTGAGAGTGAGACCCCAAGAGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229440.2 |
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| CDS GCA 90 bp | TTGTTGTCTCTCTTGGGGTCTCACTCTCAGTACGATCCCGCTGGCTaGATGCTCCACCAGGAAGAAGAACAGCTGGTTGTCTATTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLLGSHSQYDPAG*MLHQEEEQLVVYCP Trigger: AGGACAATAGACAACCAGCTGTTCTTCTTCCTGGTGGAGCATGCAGCCAGCGGGATCGTACTGAGAGTGAGACCCCAAGAGAGACAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229440.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCGGCAGTGAAGTTCAGTaGTTTGCACCATGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPSEGHSEKSQRWQHLCGSEVQ*FAPCTA Trigger: AGCTGTGCATGGTGCAAACAACTGAACTTCACTGCC...GCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | TGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCGAGGCAGTGAGTAGCTaGAAGAGTGACCCAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CCPLKVTLKNLSGGSIFAEAVSS*KSDPEI Trigger: GATTTCTGGGTCACTCTTCAAGCTACTCACTGCCTC...GGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS-3UTR CAA 90 bp | CATCTTTGCCTGACAGACGCTGCCCTGCCCTTCTATCTCCACTGTCCTCCAAGATCTATTGTCCTTTCTTaGCACCAGCCATCATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLCLTDAALPFYLHCPPRSIVLS*HQPSSK Trigger: CTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGA...TCTTGGAGGACAGTGGAGATAGAAGGGCAGGGCAGCGTCTGTCAGGCAAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS GCA 90 bp | AGACTTGGGAATCAACTGTCTCAGCTCCTGATACACAGGCAGTGTTaGACCGGTGACAGCAAAGATAGGTTGGATATTCGCTGCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGNQLSQLLIHRQC*TGDSKDRLDIRCSE Trigger: CTCACTGCAGCGAATATCCAACCTATCTTTGCTGTCACCGGTGCAACACTGCCTGTGTATCAGGAGCTGAGACAGTTGATTCCCAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 90 bp | AGTACGATCCCGCTGGCTGCATGCTCCACCAGGAAGAAGAACAGCTaGTTGTCTATTGTCCTTTCTTTGCACCAGCCATCATCCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: STIPLAACSTRKKNS*LSIVLSLHQPSSKL Trigger: TAACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGTTCTTCTTCCTGGTGGAGCATGCAGCCAGCGGGATCGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS TCA 90 bp | TCTGCGGCCTCCCCAGAGGATGTAATCTTGGTATCTAACTCACTCTaGCCTCCGCCCAGAACCAGCAGAAAAATGAGAACAGTTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAASPEDVILVSNSL*PPPRTSRKMRTVDE Trigger: TTCATCAACTGTTCTCATTTTTCTGCTGGTTCTGGGCGGAGGTCAGAGTGAGTTAGATACCAAGATTACATCCTCTGGGGAGGCCGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS-3UTR CAA 90 bp | TCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGCAGCATCTTTGCCTGACAGACACAGCTGGTTGTCTATaGTCCTTTCTTTGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SEGHSEKSQRWQHLCLTDTAGCL*SFLCTS Trigger: GCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGT...GTCTGTCAGGCAAAGATGCTGCCACCGCTGAGATTTTTCAGAGTGACCTTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR CAA 90 bp | TGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTGGAAGAAGAACAGCTGGTaGTCTATTGTCCTTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WWEWLLPSEGHSEKSQRWKKNSW*SIVLSL Trigger: CAAAGAAAGGACAATAGACAACCAGCTGTTCTTCTT...CCACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTGGGAATGGCTGCTGCCCTCTGAAGGTCACTCTGAAAAATCTCAGCGGTAAGAAGAACAGCTGGTaGTCTATTGTCCTTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGGNGCCPLKVTLKNLSGKKNSW*SIVLSL Trigger: CAAAGAAAGGACAATAGACAACCAGCTGTTCTTCTT...ACCGCTGAGATTTTTCAGAGTGACCTTCAGAGGGCAGCAGCCATTCCCACCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS CCA 72 bp | GGTCGCAGCGTGACGCGGATCCGCTGCGGGGCCAGCTaGGTGGCCCCCTCGCCGCGATCTCCCTGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRSVTRIRCGAS*VAPSPRSPWLS Trigger: GCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGGCCCCGCAGCGGATCCGCGTCACGCTGCGACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | GGGGCCAGCTGGGTGGCCCCCTCGCCGCGATCTCCCTaGCTGAGCGGCTTGTCCTGCAGCACCTCCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GASWVAPSPRSP*LSGLSCSTSWR Trigger: CCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGGCCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | CCAGCTGGGTGGCCCCCTCGCCGCGATCTCCCTGGCTaGGCGGCTTGTCCTGCAGCACCTCCTGGCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAGWPPRRDLPG*AACPAAPPGGL Trigger: GAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 72 bp | GTGGCCCCCTCGCCGCGATCTCCCTGGCTGAGCGGCTaGTCCTGCAGCACCTCCTGGCGGCCTCTCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAPSPRSPWLSG*SCSTSWRPLGS Trigger: GGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | GCCAGCTGGGTGGCCCCCTCGCCGCGATCTCCCTGGCTGAGCGGCTaGTCCTGCAGCACCTCCTGGCGGCCTCTCGGCTCCTCTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASWVAPSPRSPWLSG*SCSTSWRPLGSSSS Trigger: GGAGCTAGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGGGGCCACCCAGCTGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | CCCTCGCCGCGATCTCCCTGGCTGAGCGGCTTGTCCTaGAGCACCTCCTGGCGGCCTCTCGGCTCCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSPRSPWLSGLS*STSWRPLGSSS Trigger: GCTAGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGATCGCGGCGAGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | TCTCCCTGGCTGAGCGGCTTGTCCTGCAGCACCTCCTaGCGGCCTCTCGGCTCCTCTAGCTCCTGCGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPWLSGLSCSTS*RPLGSSSSCAG Trigger: CCCCGCGCAGGAGCTAGAGGAGCCGAGAGGCCGCCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | TACCCCGCAGCTCGGAGGAAGCGGACCCGGAATTTCTaGGGCTCCCCTGGTCGCAGCGTGACGCGGATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: YPAARRKRTRNF*GSPGRSVTRIR Trigger: GCGGATCCGCGTCACGCTGCGACCAGGGGAGCCCCAGAAATTCCGGGTCCGCTTCCTCCGAGCTGCGGGGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | AGCTGCAGCGTCCACATTGGCATCGACCCTTCCCGCTaGATAGGGGCCCTGTCCCGTTTGGGGCCCGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCSVHIGIDPSR*IGALSRLGPGN Trigger: GTTGCCGGGCCCCAAACGGGACAGGGCCCCTATGCAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | CCAGAGCTCTGCCCACTGCAGCTGCAGCGTCCACATTaGCATCGACCCTTCCCGCTGCATAGGGGCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PELCPLQLQRPH*HRPFPLHRGPV Trigger: GACAGGGCCCCTATGCAGCGGGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | GGGGAGGACAGGTCAGCCTCAGAGCATTCACACAGCTaGCCAAGACGGCCAGGGGCACAGCTGCATATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GEDRSASEHSHS*PRRPGAQLHIP Trigger: CGGGATATGCAGCTGTGCCCCTGGCCGTCTTGGTCAGCTGTGTGAATGCTCTGAGGCTGACCTGTCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | GTCCCACTGCCACGATGCCCCCTGTGCAGCCCAGTATaGTGGCACGGGTGTGATCCACTCCCTTCTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VPLPRCPLCSPV*WHGCDPLPSLG Trigger: CCCAAGAGAAGGGAGTGGATCACACCCGTGCCATCATACTGGGCTGCACAGGGGGCATCGTGGCAGTGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | CATCACACTCGCACAGACGCCCAGAGCTCTGCCCACTaGAGCTGCAGCGTCCACATTGGCATCGACCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HHTRTDAQSSAH*SCSVHIGIDPS Trigger: GGAAGGGTCGATGCCAATGTGGACGCTGCAGCTGCAGTGGGCAGAGCTCTGGGCGTCTGTGCGAGTGTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | CAGGTTGCCAGAGACATTCTGGCGTCCCACCTCTCTCTCGAAGGCTaGAGCGTCCCCGGTGAGGGACAGCACGTGGTGAAAGCTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVARDILASHLSLEG*SVPGEGQHVVKAEG Trigger: CCCTTCAGCTTTCACCACGTGCTGTCCCTCACCGGGGACGCTCAAGCCTTCGAGAGAGAGGTGGGACGCCAGAATGTCTCTGGCAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | CACTTCTGGCAGGAAGGAACTGGCTGGCAGGATCCCTaGAGAGACAGGTCAGGATCCTCCCATTCTGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HFWQEGTGWQDP*RDRSGSSHSAA Trigger: GGCCGCAGAATGGGAGGATCCTGACCTGTCTCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAGAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS GCA 72 bp | GAGCCAAAACCTATGCGCACAGAATGTGTGACCTCCTaGAGCCTGACCAGCAGGGCATGCCCTAGCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPKPMRTECVTS*SLTSRACPSWR Trigger: GCGCCAGCTAGGGCATGCCCTGCTGGTCAGGCTGCAGGAGGTCACACATTCTGTGCGCATAGGTTTTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS CCA 72 bp | AACGCTCCAGTCGGCTGGGGCATGGGTGGTGAAGCTTaGAGGGCACGGTGCTTACAAAGGGCAGCACCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NAPVGWGMGGEA*RARCLQRAAPF Trigger: AAACGGTGCTGCCCTTTGTAAGCACCGTGCCCTCCAAGCTTCACCACCCATGCCCCAGCCGACTGGAGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS GCA 72 bp | ATTCACACAGCTGACCAAGACGGCCAGGGGCACAGCTaGATATCCCGCACTGAAGGTCCCCCTGTCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: IHTADQDGQGHS*ISRTEGPPVHH Trigger: GTGATGGACAGGGGGACCTTCAGTGCGGGATATGCAGCTGTGCCCCTGGCCGTCTTGGTCAGCTGTGTGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS GCA 72 bp | CACATTCACGTCAGCACAGACCACACTACAGTTGGCTaGCAGGGGACCGGTACCAAATGCCCCGCACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HIHVSTDHTTVG*QGTGTKCPALC Trigger: GCAGAGTGCGGGGCATTTGGTACCGGTCCCCTGGCAGCCAACTGTAGTGTGGTCTGTGCTGACGTGAATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS CCA 72 bp | AGCCTCCACAGAGGATGCCCTCATGTCGCTCACAGCTaGCATCATCACACTCGCACAGACGCCCAGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLHRGCPHVAHS*HHHTRTDAQSS Trigger: AGAGCTCTGGGCGTCTGTGCGAGTGTGATGATGCCAGCTGTGAGCGACATGAGGGCATCCTCTGTGGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
||
| CDS CAA 72 bp | AGAGACATTCTGGCGTCCCACCTCTCTCTCGAAGGCTaGAGCGTCCCCGGTGAGGGACAGCACGTGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RDILASHLSLEG*SVPGEGQHVVK Trigger: TTTCACCACGTGCTGTCCCTCACCGGGGACGCTCAAGCCTTCGAGAGAGAGGTGGGACGCCAGAATGTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | TGTGCAGCCCAGTATGATGGCACGGGTGTGATCCACTCCCTTCTCTaGGGGTCTCACTCTCAGTACGATCCCGCTGGCTGCATGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: CAAQYDGTGVIHSLL*GSHSQYDPAGCMLH Trigger: GTGGAGCATGCAGCCAGCGGGATCGTACTGAGAGTGAGACCCCAAGAGAAGGGAGTGGATCACACCCGTGCCATCATACTGGGCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | GCCAAGGTCAAGGTCACATTCACGTCAGCACAGACCACACTACAGTaGGCTGCCAGGGGACCGGTACCAAATGCCCCGCACTCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: AKVKVTFTSAQTTLQ*AARGPVPNAPHSAQ Trigger: TTGTGCAGAGTGCGGGGCATTTGGTACCGGTCCCCTGGCAGCCAACTGTAGTGTGGTCTGTGCTGACGTGAATGTGACCTTGACCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | ATGCCCCCTGTGCAGCCCAGTATGATGGCACGGGTGTaGTCCACTCCCTTCTCTTGGGGTCTCACTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: MPPVQPSMMARV*STPFSWGLTLS Trigger: ACTGAGAGTGAGACCCCAAGAGAAGGGAGTGGATCACACCCGTGCCATCATACTGGGCTGCACAGGGGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | TCCAGGCACTGGCAACGGTTGCATTTGCAGTATCCGTaGCCACTGCAGAGCCCTCCTTCAGGACTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: SRHWQRLHLQYP*PLQSPPSGLTQ Trigger: CTGTGTCAGTCCTGAAGGAGGGCTCTGCAGTGGGCACGGATACTGCAAATGCAACCGTTGCCAGTGCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | CGTAGTAGCCATCCAGGCACTGGCAACGGTTGCATTTaGAGTATCCGTGCCCACTGCAGAGCCCTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSSHPGTGNGCI*SIRAHCRALLQ Trigger: CTGAAGGAGGGCTCTGCAGTGGGCACGGATACTGCAAATGCAACCGTTGCCAGTGCCTGGATGGCTACTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | AGCCAATCTGTTCCTGGCAGAGGGCAGCCTGCAAAATaGCATCAAAGCCGCCTTCGGGTGAGTCCAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQSVPGRGQPAK*HQSRLRVSPGC Trigger: GCAACCTGGACTCACCCGAAGGCGGCTTTGATGCCATTTTGCAGGCTGCCCTCTGCCAGGAACAGATTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 72 bp | CAGTATGATGGCACGGGTGTGATCCACTCCCTTCTCTaGGGGTCTCACTCTCAGTACGATCCCGCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QYDGTGVIHSLL*GSHSQYDPAGC Trigger: GCAGCCAGCGGGATCGTACTGAGAGTGAGACCCCAAGAGAAGGGAGTGGATCACACCCGTGCCATCATACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | TGCTTCCCTGGTCAGAGAGAGGGATGGCGACCGACCGTTTGTCCCTaGGAAGCGGGGGTTGACAGTGGTTGTGATCGCACTTTTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: CFPGQREGWRPTVCP*EAGVDSGCDRTFVE Trigger: CTCTACAAAAGTGCGATCACAACCACTGTCAACCCCCGCTTCCAAGGGACAAACGGTCGGTCGCCATCCCTCTCTCTGACCAGGGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS TCA 72 bp | AGTATCCGTGCCCACTGCAGAGCCCTCCTTCAGGACTaGCACAGCTGTCTACACTCTTGCTGCACTCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SIRAHCRALLQD*HSCLHSCCTRK Trigger: CTTGCGAGTGCAGCAAGAGTGTAGACAGCTGTGTCAGTCCTGAAGGAGGGCTCTGCAGTGGGCACGGATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | AAATGGCATCAAAGCCGCCTTCGGGTGAGTCCAGGTTaGCAGAGACATTCTGGCGTCCCACCTCTCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: KWHQSRLRVSPG*QRHSGVPPLSR Trigger: TCGAGAGAGAGGTGGGACGCCAGAATGTCTCTGGCAACCTGGACTCACCCGAAGGCGGCTTTGATGCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | TTTCTCCAGCCAATCTGTTCCTGGCAGAGGGCAGCCTaGAAAATGGCATCAAAGCCGCCTTCGGGTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FLQPICSWQRAA*KMASKPPSGES Trigger: GGACTCACCCGAAGGCGGCTTTGATGCCATTTTGCAGGCTGCCCTCTGCCAGGAACAGATTGGCTGGAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | TGCACCGGTGACAGCAAAGATAGGTTGGATATTCGCTaGAGTGAGGGCCTGGGCTACTTGACCCACAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CTGDSKDRLDIR*SEGLGYLTHRG Trigger: CCCTCTGTGGGTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCTATCTTTGCTGTCACCGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | CCAGCCTCACCCTCCGTCTTCTCAGGACCCTTACAGTaGGATTCAAAGGAGATGCTGACTCCTGGTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PASPSVFSGPLQ*DSKEMLTPGGS Trigger: ACTCCCACCAGGAGTCAGCATCTCCTTTGAATCTCACTGTAAGGGTCCTGAGAAGACGGAGGGTGAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | ACTCTGCACAATCCCTGTACTGCTCACATGGTGACTTaGAGCCTAGGCACTGGTCACACAGAGCCCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: TLHNPCTAHMVT*SLGTGHTEPRS Trigger: ACTACGGGGCTCTGTGTGACCAGTGCCTAGGCTGCAAGTCACCATGTGAGCAGTACAGGGATTGTGCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CCA 72 bp | CACCATGCACAGCTGGGATGTGAGAGAATACACTTCTaGCAGGAAGGAACTGGCTGGCAGGATCCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HHAQLGCERIHF*QEGTGWQDPCR Trigger: TCTGCAGGGATCCTGCCAGCCAGTTCCTTCCTGCCAGAAGTGTATTCTCTCACATCCCAGCTGTGCATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000127014.3 |
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| CDS CAA 72 bp | CACAGGCAGTGTTGCACCGGTGACAGCAAAGATAGGTaGGATATTCGCTGCAGTGAGGGCCTGGGCTACTTG | + |
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Preference number: 6 (lower is better) Translates to: HRQCCTGDSKDR*DIRCSEGLGYL Trigger: CAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCTATCTTTGCTGTCACCGGTGCAACACTGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | CTCCTGATACACAGGCAGTGTTGCACCGGTGACAGCAAAGATAGGTaGGATATTCGCTGCAGTGAGGGCCTGGGCTACTTGACCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LLIHRQCCTGDSKDR*DIRCSEGLGYLTHR Trigger: TCTGTGGGTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCTATCTTTGCTGTCACCGGTGCAACACTGCCTGTGTATCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | GGCTGGGCATCACCACAGTTACAGTCGCACACTGTGTaGAGCTCCACAGTTAACTCCTCTGAGAAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GWASPQLQSHTV*SSTVNSSEKPR Trigger: TCTTGGCTTCTCAGAGGAGTTAACTGTGGAGCTGCACACAGTGTGCGACTGTAACTGTGGTGATGCCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 72 bp | AGGTTGGATATTCGCTGCAGTGAGGGCCTGGGCTACTaGACCCACAGAGGGATAGTCAAACTCTGCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RLDIRCSEGLGY*THRGIVKLCAV Trigger: AACAGCGCAGAGTTTGACTATCCCTCTGTGGGTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS GCA 72 bp | CTGGGCTACTTGACCCACAGAGGGATAGTCAAACTCTaGGCTGTTCGTGTAGACACCATTGCTGTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LGYLTHRGIVKL*AVRVDTIAVQM Trigger: CATCTGGACAGCAATGGTGTCTACACGAACAGCGCAGAGTTTGACTATCCCTCTGTGGGTCAAGTAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | AGCAAAGATAGGTTGGATATTCGCTGCAGTGAGGGCCTGGGCTACTaGACCCACAGAGGGATAGTCAAACTCTGCGCTGTTCGTGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: SKDRLDIRCSEGLGY*THRGIVKLCAVRVD Trigger: GTCTACACGAACAGCGCAGAGTTTGACTATCCCTCTGTGGGTCAAGTAGCCCAGGCCCTCACTGCAGCGAATATCCAACCTATCTTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS TCA 72 bp | TGGTGGGAGTGGAGAGTGCTCAAGAGTCACAGTGGATaGCAGGCTATCATAAGCATCCATGATGAGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: WWEWRVLKSHSG*QAIISIHDELH Trigger: GTGCAGCTCATCATGGATGCTTATGATAGCCTGTCATCCACTGTGACTCTTGAGCACTCTCCACTCCCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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| CDS CAA 90 bp | TGCTCCACCAGGAAGAAGAACAGCTGGTTGTCTATTGTCCTTTCTTaGCACCAGCCATCATCCAAGTTAGGGGCCAAGGTCAAGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: CSTRKKNSWLSIVLS*HQPSSKLGAKVKVT Trigger: TGTGACCTTGACCTTGGCCCCTAACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGTTCTTCTTCCTGGTGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001327.11 ENSMUST00000229440.2 |
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| CDS TCA 72 bp | TCCCATCCCCAGCTGTGTGGAATGTATCGTCTGAAGTaGACACTAGAAGACGGGAGACATTTCTCCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SHPQLCGMYRLK*TLEDGRHFSSQ Trigger: TTGGCTGGAGAAATGTCTCCCGTCTTCTAGTGTTCACTTCAGACGATACATTCCACACAGCTGGGGATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001327.11 |
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