Pregenerated sensors for ITGB6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026971Ensembl transcript IDs: ENSMUST00000028348.9, ENSMUST00000059888.15, ENSMUST00000112517.8, ENSMUST00000154764.2
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGGGCTTGGGGTTATAAGATTGAGAGTCTGTACCCACCTCTTCTaGCCATCCTCTCAGCATCTCTATGGAGATCCAGTGAGATCAAAG | + |
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Preference number: 1 (lower is better) Translates to: KGLGVIRLRVCTHLF*PSSQHLYGDPVRSK Trigger: CTTTGATCTCACTGGATCTCCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTTATAACCCCAAGCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR CCA 90 bp | GAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTCTATaGAGATCCAGTGAGATCAAAGTGGTTTGTAATGCAGCAGTAACT | + |
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Preference number: 1 (lower is better) Translates to: ESLYPPLLPILSASL*RSSEIKVVCNAAVT Trigger: AGTTACTGCTGCATTACAAACCACTTTGATCTCACTGGATCTCCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 90 bp | TACACAGACCTATATGGCAGGAGTGAAGGAGGTTTGAGACCAAGCTaGCAATTCAACAGACAGCTGTCAAAGCCTCCACTCACAAACACA | + |
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Preference number: 1 (lower is better) Translates to: YTDLYGRSEGGLRPS*QFNRQLSKPPLTNT Trigger: TGTGTTTGTGAGTGGAGGCTTTGACAGCTGTCTGTTGAATTGTCAGCTTGGTCTCAAACCTCCTTCACTCCTGCCATATAGGTCTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 90 bp | CCTCTAAAGCTGTTACAAGTTCACCCACTAAGACGCCCTACAACATaGGAACAACCCGAGTCTAGTCAATGGCTTCTTTTGCTCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: PLKLLQVHPLRRPTT*EQPESSQWLLLLSK Trigger: CTTAGAGAGCAAAAGAAGCCATTGACTAGACTCGGGTTGTTCTCATGTTGTAGGGCGTCTTAGTGGGTGAACTTGTAACAGCTTTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR TCA 90 bp | GAAATGTGGAATAATAGGAGGGAAACTTGGGGATCAGAGGGCAATTaGACACGGAGGACCCATATCTTTAGTGTTACTAGCAACACATTT | + |
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Preference number: 1 (lower is better) Translates to: EMWNNRRETWGSEGN*TRRTHIFSVTSNTF Trigger: AAATGTGTTGCTAGTAACACTAAAGATATGGGTCCTCCGTGTTCAATTGCCCTCTGATCCCCAAGTTTCCCTCCTATTATTCCACATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR CCA 90 bp | CAAGCCCATGACTTAATTTTCAATCTCTCACTTGGGAAGTCACTCTaGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: QAHDLIFNLSLGKSL*ENWILSVDGKSDSH Trigger: ATGAGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCCAAGTGAGAGATTGAAAATTAAGTCATGGGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR CCA 90 bp | GACTTAATTTTCAATCTCTCACTTGGGAAGTCACTCTGGGAGAACTaGATTCTTTCAGTTGATGGGAAATCAGACTCTCATTTCTCATAC | + |
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Preference number: 1 (lower is better) Translates to: DLIFNLSLGKSLWEN*ILSVDGKSDSHFSY Trigger: GTATGAGAAATGAGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCCAAGTGAGAGATTGAAAATTAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 90 bp | GACTTCCACAGTCTTGACACATTTGATATAAAGCTGTGTAGCCTTTaGTTCTGTTACCCTAGGTTTCTTTTCTATTCTCAAAATTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: DFHSLDTFDIKLCSL*FCYPRFLFYSQNSS Trigger: ACTAGAATTTTGAGAATAGAAAAGAAACCTAGGGTAACAGAATCAAAGGCTACACAGCTTTATATCAAATGTGTCAAGACTGTGGAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CCA 90 bp | TGGCATGCCCACCTCCTGAAGCTGGGATGTGTGTTCTGGGTGGTACATACGGGATCTCTGAGCATGAAATaGAAGGCAGAGACAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: WHAHLLKLGCVFWVVHTGSLSMK*KAETGS Trigger: ACTGCCTGTCTCTGCCTTCCATTTCATGCTCAGAGA...TCCCGTATGTACCACCCAGAACACACATCCCAGCTTCAGGAGGTGGGCATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR CAA 90 bp | AGAGTCTCGTGCAGTAGAGAGAACAAAGGGCTTGGGGTTATAAGATaGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: RVSCSRENKGLGVIR*RVCTHLFCPSSQHL Trigger: GAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTTATAACCCCAAGCCCTTTGTTCTCTCTACTGCACGAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAGGCAGTTCCATGGTTGTGAGTTCAAGGCCAGGCAGCCTGGTCAGTTCGGGATATTCTTTTCTTaGTTGTTTCCAATCAGCGAA | + |
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Preference number: 2 (lower is better) Translates to: RDRQFHGCEFKARQPGQFGIFFS*LFPISE Trigger: TTCGCTGATTGGAAACAATCAAGAAAAGAATATCCC...GAACTGACCAGGCTGCCTGGCCTTGAACTCACAACCATGGAACTGCCTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACAAGGCCAGGCAGCCTaGTCAGTTCCAGAATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: IKVVCNAAVTIRNETLQRQGQAA*SVPEWP Trigger: TGGCCATTCTGGAACTGACCAGGCTGCCTGGCCTTG...TCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR TCA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAAAGACGCCCTACAACATaGGAACAACCCGAGTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: TMKLFPGVSRNVIISPVERRPTT*EQPESS Trigger: ACTAGACTCGGGTTGTTCTCATGTTGTAGGGCGTCT...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTATTTAGAGCAAGTGGGTaGCATGCCCACCTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KVVCNAAVTIRNETLQRLFRASG*HAHLLK Trigger: CTTCAGGAGGTGGGCATGCCACCCACTTGCTCTAAA...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR GCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTTGTACCCACCTCTTCTaGCCATCCTCTCAGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCCTHLF*PSSQHL Trigger: GAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACA...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGTATTTCCATGGAAATTaGCATGAACTGTCATGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQYFHGN*HELSCL Trigger: CAAGCATGACAGTTCATGCCAATTTCCATGGAAATA...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCATACTGCCTGGTATTTaGAAAGGCCTGTCAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: SVNINLFRQMNPKAQCVCILPGI*KGLSTL Trigger: CAAAGTTGACAGGCCTTTTCAAATACCAGGCAGTAT...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTACTTGGGAAGTCACTCTaGGAGAACTGGATTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: KVVCNAAVTIRNETLQRLLGKSL*ENWILS Trigger: TGAAAGAATCCAGTTCTCCCAGAGTGACTTCCCAAG...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTACTGGATTCTTTCAGTTaGTGGGAAATCAGACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: KVVCNAAVTIRNETLQRLLDSFS*WEIRLS Trigger: TGAGAGTCTGATTTCCCATCAACTGAAAGAATCCAG...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCAGTCAATGGCTTCTTTTaGTCTCTAAGCAAGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSVNGFF*SLSKIE Trigger: TTCTATCTTGCTTAGAGAGCAAAAGAAGCCATTGAC...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTCTCTCAGCATCTCTATaGAGATCCAGTGAGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCLSASL*RSSEIK Trigger: TTTGATCTCACTGGATCTCCATAGAGATGCTGAGAG...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR GCA 72 bp | CAGTCTCACCACATCACTGGGAGTGAATCTGCTGGTTaGTCCAGACTCCAAGATCTTGGACCATTCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: QSHHITGSESAG*SRLQDLGPFRD Trigger: ATCCCTGAATGGTCCAAGATCTTGGAGTCTGGAGCAACCAGCAGATTCACTCCCAGTGATGTGGTGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR GCA 72 bp | GGGGTTATAAGATTGAGAGTCTGTACCCACCTCTTCTaGCCATCCTCTCAGCATCTCTATGGAGATCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GVIRLRVCTHLF*PSSQHLYGDPV Trigger: CACTGGATCTCCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTTATAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | CTATATGGCAGGAGTGAAGGAGGTTTGAGACCAAGCTaGCAATTCAACAGACAGCTGTCAAAGCCTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: LYGRSEGGLRPS*QFNRQLSKPPL Trigger: GAGTGGAGGCTTTGACAGCTGTCTGTTGAATTGTCAGCTTGGTCTCAAACCTCCTTCACTCCTGCCATATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | CGTACACAGACCTATATGGCAGGAGTGAAGGAGGTTTaGGACCAAGCTGACAATTCAACAGACAGCTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: RTQTYMAGVKEV*DQADNSTDSCQ Trigger: TTGACAGCTGTCTGTTGAATTGTCAGCTTGGTCTCAAACCTCCTTCACTCCTGCCATATAGGTCTGTGTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CAA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTGGGATCAGAGGGCAATaGAACACGGAGGACCCATAT | + |
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Preference number: 3 (lower is better) Translates to: GGLGANCFVSVYFQTKTVGIRGQ*NTEDPY Trigger: ATATGGGTCCTCCGTGTTCAATTGCCCTCTGATCCC...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | CTGTTACAAGTTCACCCACTAAGACGCCCTACAACATaGGAACAACCCGAGTCTAGTCAATGGCTTCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLQVHPLRRPTT*EQPESSQWLLL Trigger: CAAAAGAAGCCATTGACTAGACTCGGGTTGTTCTCATGTTGTAGGGCGTCTTAGTGGGTGAACTTGTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR-3UTR CAA 90 bp | AAGATTGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTCTATGGTGGGATATTCTTTTCTaGATTGTTTCCAATCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: KIESLYPPLLPILSASLWWDILF*IVSNQR Trigger: TCGCTGATTGGAAACAATCAAGAAAAGAATATCCCA...CCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CAA 90 bp | AAGATTGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTCTATGGTACCGGTTTTGTTTGTaGCCTTGCATAGATTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: KIESLYPPLLPILSASLWYRFCL*PCIDFV Trigger: TACAAAATCTATGCAAGGCAACAAACAAAACCGGTA...CCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | AATAATAGGAGGGAAACTTGGGGATCAGAGGGCAATTaGACACGGAGGACCCATATCTTTAGTGTTACTAGC | + |
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Preference number: 3 (lower is better) Translates to: NNRRETWGSEGN*TRRTHIFSVTS Trigger: GCTAGTAACACTAAAGATATGGGTCCTCCGTGTTCAATTGCCCTCTGATCCCCAAGTTTCCCTCCTATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | TGTTCACCTAGGGAGTGGATTCACCTTAATATCCAGTaGAGGCAACACACACAGCACAAAAATACAGCAACC | + |
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Preference number: 3 (lower is better) Translates to: CSPREWIHLNIQ*RQHTQHKNTAT Trigger: GGTTGCTGTATTTTTGTGCTGTGTGTGTTGCCTTCACTGGATATTAAGGTGAATCCACTCCCTAGGTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CAA 90 bp | ACCGGTCCACATTCCGGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCTGAATGACTGGTTGTaGAATGACCTGTTATTATCT | + |
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Preference number: 3 (lower is better) Translates to: TGPHSGGLGANCFVSVYFLNDWL*NDLLLS Trigger: AGATAATAACAGGTCATTCAACAACCAGTCATTCAG...AAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR GCA 72 bp | CATGAGAACAACCCGAGTCTAGTCAATGGCTTCTTTTaGTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: HENNPSLVNGFF*SLSKIETKAVG Trigger: CCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCAAAAGAAGCCATTGACTAGACTCGGGTTGTTCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR CCA 72 bp | TTCAATCTCTCACTTGGGAAGTCACTCTGGGAGAACTaGATTCTTTCAGTTGATGGGAAATCAGACTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: FNLSLGKSLWEN*ILSVDGKSDSH Trigger: ATGAGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCCAAGTGAGAGATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTATTCTTCAAGGGATCTaGAATTCATCTCTTTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GKSLWENWILSVDGKSDSILQGI*NSSLCL Trigger: CAAGCAAAGAGATGAATTCAAGATCCCTTGAAGAAT...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR TCA 72 bp | TGGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTaGTGGGAAATCAGACTCTCATTTCTCATACATAAA | + |
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Preference number: 3 (lower is better) Translates to: WEVTLGELDSFS*WEIRLSFLIHK Trigger: TTTATGTATGAGAAATGAGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR-3UTR CAA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAAAGTCAATGGCTTCTTTaGCTCTCTAAGCAAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: TMKLFPGVSRNVIISPVESQWLL*LSKQDR Trigger: TCTATCTTGCTTAGAGAGCAAAAGAAGCCATTGACT...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| 3UTR TCA 72 bp | ATACTTGTGTCCATGTCTTTTAAGAGTACAAGCCCATaGCTTAATTTTCAATCTCTCACTTGGGAAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: ILVSMSFKSTSP*LNFQSLTWEVT Trigger: AGTGACTTCCCAAGTGAGAGATTGAAAATTAAGTCATGGGCTTGTACTCTTAAAAGACATGGACACAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| 3UTR GCA 72 bp | AAATACTGCCTGGTATTTGAAAAGGCCTGTCAACTTTaGATCTGTACATCAGTAACAAGTATTTCCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: KYCLVFEKACQL*ICTSVTSISME Trigger: TTCCATGGAAATACTTGTTACTGATGTACAGATGCAAAGTTGACAGGCCTTTTCAAATACCAGGCAGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR GCA 90 bp | TGGCATGCCCACCTCCTGAAGCTGGGATGTGTGTTCTGGGTGGTACATACGGGAAGGCTCCAGGGTTTCTaGAGACACACTTGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WHAHLLKLGCVFWVVHTGRLQGF*RHTCHR Trigger: TCTGTGGCAAGTGTGTCTGCAGAAACCCTGGAGCCT...TCCCGTATGTACCACCCAGAACACACATCCCAGCTTCAGGAGGTGGGCATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR TCA 90 bp | ACCGGTCCACATTCCGGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTACCCCTTCCACTGCATaGAGGGTGACCCGGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TGPHSGGLGANCFVSVYFTPSTA*RVTRGL Trigger: GAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGT...AAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR TCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTCTCCAGACAGGTGGGTaGAATTCTCCTGGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTLQTGG*NSPGST Trigger: GGTGCTCCCAGGAGAATTTCACCCACCTGTCTGGAG...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCGAGCACCAGGCGCAGTaGGGTCCTGTGAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVEHQAQ*GPVSRQ Trigger: CTGCCTGCTCACAGGACCCCACTGCGCCTGGTGCTC...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR GCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTTTGGGCCTGGCCATCTaGAGACAGGTAGCACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTLGLAI*RQVALD Trigger: ATCGAGTGCTACCTGTCTGCAGATGGCCAGGCCCAA...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTCCGTACGGCGATAAGTaGCAGATGCACTGCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTPYGDK*QMHCPQ Trigger: TTGTGGGCAGTGCATCTGCCACTTATCGCCGTACGG...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTGACAGCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKSLWENWILSVDGKSDSDSVHR*VLRLQG Trigger: ACCCTGGAGCCTCAGGACCCACCTGTGAACGCTGTC...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR TCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGTTCACAGGTGGGTCCTaGGGCTCCAGGGTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQFTGGS*GSRVSA Trigger: TGCAGAAACCCTGGAGCCTCAGGACCCACCTGTGAA...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR GCA 90 bp | AAGATTGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTCTATGGCCTTGCAGGAATCCGTaGTCACCATATCCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIESLYPPLLPILSASLWPCRNP*SPYPHH Trigger: GTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGG...CCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAGAGCACCAGGCGCAGTaGGGTCCTGTGAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLEHQAQ*GPVSRQ Trigger: CTGCCTGCTCACAGGACCCCACTGCGCCTGGTGCTC...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTTAGAGCAAGTGGGTGGCATGCCCACCTCCTGAAGCTGGGATGTGTGTTCAGTTGCTGGTTAGTTTaGACATCTCTTTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRASGWHAHLLKLGCVFSCWLV*TSLWPA Trigger: GGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACT...GAACACACATCCCAGCTTCAGGAGGTGGGCATGCCACCCACTTGCTCTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGACAATTCAACAGACAGCTGTCAAAGCCTCCACTCACAAACACAGAGCGTCCATCATTGGGAATaGCAATGCCTGCCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QADNSTDSCQSLHSQTQSVHHWE*QCLPAC Trigger: GCAAGCTGGCAGGCATTGTCATTCCCAATGATGGAC...GCTCTGTGTTTGTGAGTGGAGGCTTTGACAGCTGTCTGTTGAATTGTCAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTGAGCAGGATCGCCAGTaGCACCCCCAACATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSLWENWILSVDGKSDSEQDRQ*HPQHDH Trigger: ATGATCATGTTGGGGGTGTCACTGGCGATCCTGCTC...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTAGTCCACATACCGTTTaGCACTTGGCCTTAGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTSPHTV*HLALER Trigger: ACGCTCTAAGGCCAAGTGGCAAACGGTATGTGGACT...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTCCAGCTCCAGACAGGTaGGTGAAATTCTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSLWENWILSVDGKSDSPAPDR*VKFSWE Trigger: CTCCCAGGAGAATTTCACCCACCTGTCTGGAGCTGG...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACTGTGAGCAGGCAGTCTaGGCAGCTTTCTGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDCEQAV*AAFCTT Trigger: GGTGGTGCAGAAAGCTGCTCAGACTGCCTGCTCACA...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGGCGGAGATGATCAGCTaGAGGATGTTCCCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQAEMIS*RMFPES Trigger: GGATTCTGGGAACATCCTTCAGCTGATCATCTCCGC...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTAGCAGCCTGCATGATTaGATCAAATCCACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTSSLHD*IKSTFR Trigger: CCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCT...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCCCAGCTCCAGACAGGTaGGTGAAATTCTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVPAPDR*VKFSWE Trigger: CTCCCAGGAGAATTTCACCCACCTGTCTGGAGCTGG...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGACAGCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEDSVHR*VLRLQG Trigger: ACCCTGGAGCCTCAGGACCCACCTGTGAACGCTGTC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCTCAGCACACTCTTCTTaGGCCTGGCCATCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVSAHSS*AWPSAD Trigger: GTCTGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGA...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| 3UTR CAA 72 bp | TGCAGTAGAGAGAACAAAGGGCTTGGGGTTATAAGATaGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRENKGLGVIR*RVCTHLFCPSS Trigger: AGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTTATAACCCCAAGCCCTTTGTTCTCTCTACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTTGTGAGCAGGCAGTCTaGGCAGCTTTCTGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGANCFVSVYFQTKTVCEQAV*AAFCTT Trigger: GGTGGTGCAGAAAGCTGCTCAGACTGCCTGCTCACA...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCGTCCATCATTGGGAATaGCAATGCCTGCCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVVHHWE*QCLPAC Trigger: GCAAGCTGGCAGGCATTGTCATTCCCAATGATGGAC...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTCGGTTGCTCCAGGAATaGGTTTTGCATAGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTRLLQE*VLHSSH Trigger: ATGAGAACTATGCAAAACTCATTCCTGGAGCAACCG...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACACCCCTTCCACTGCATaGAGGGTGACCCGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYTPSTA*RVTRGL Trigger: GAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATACCCCTTCCACTGCATaGAGGGTGACCCGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSISMEIGMNCHACHEHYTPSTA*RVTRGL Trigger: GAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGT...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGGGTGAAATTCTCCTaGGAGCACCAGGCGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEWVKFS*EHQAQW Trigger: CCACTGCGCCTGGTGCTCCCAGGAGAATTTCACCCA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACATGGGTGAAATTCTCCTaGGAGCACCAGGCGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEMFRYSAYASLQKVASTWVKFS*EHQAQW Trigger: CCACTGCGCCTGGTGCTCCCAGGAGAATTTCACCCA...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCGTACACACCCCACACTaGAAGGAGCCATTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVVHTPH*KEPFPL Trigger: CAATGGGAATGGCTCCTTCCAGTGTGGGGTGTGTAC...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCAGACAGCGTTCACAGGTaGGTCCTGAGGCTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSDSVHR*VLRLQG Trigger: ACCCTGGAGCCTCAGGACCCACCTGTGAACGCTGTC...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | AAGATTGAGAGTCTGTACCCACCTCTTCTGCCCATCCTCTCAGCATCTCTATGGAGACAGGGTTTTCAATaGAGGGTAGTTGACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIESLYPPLLPILSASLWRQGFQ*RVVDIL Trigger: AAGGATGTCAACTACCCTTCATTGAAAACCCTGTCT...CCATAGAGATGCTGAGAGGATGGGCAGAAGAGGTGGGTACAGACTCTCAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCTTCCTGTGGTCCAAGTaGCAGAGTCCATCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVFLWSK*QSPSLG Trigger: TCCCAATGATGGACTCTGTCACTTGGACCACAGGAA...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACTCAGTTTGGCGGACCTaGACTTGCAGAGTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDSVWRT*TCRVCS Trigger: TGAGCAGACTCTGCAAGTGCAGGTCCGCCAAACTGA...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACAGTCACCCCTTCCACTaGATGAAGGGTGACCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYSHPFH*MKGDPG Trigger: CCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATAGTCACCCCTTCCACTaGATGAAGGGTGACCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSISMEIGMNCHACHEHYSHPFH*MKGDPG Trigger: CCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACT...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATTGGGCCTGGCCATCTaGAGACAGGTAGCACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPELGLAI*RQVALD Trigger: ATCGAGTGCTACCTGTCTGCAGATGGCCAGGCCCAA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGACAATTCAACAGACAGCTGTCAAAGCCTCCACTCACAAACACAGAGCGTAGTTGACATCCTTTaGCTAAAAGATTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QADNSTDSCQSLHSQTQSVVDIL*LKDSLG Trigger: CCCCAGCGAATCTTTTAGCCAAAGGATGTCAACTAC...GCTCTGTGTTTGTGAGTGGAGGCTTTGACAGCTGTCTGTTGAATTGTCAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGTTTGGACATCTCTTTaGCCAGCCGGGAGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEVWTSL*PAGSQA Trigger: AGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAAC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGTGGGAGCATTTCTTTTaGTGTGGGAAGAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQWEHFF*CGKRTP Trigger: TGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCA...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAGTCCCCCAGCCCCACTaGCTTTATGATGAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLVPQPH*LYDEVP Trigger: AGGAACCTCATCATAAAGCCAGTGGGGCTGGGGGAC...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATCAGCACACTCTTCTTaGGCCTGGCCATCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPESAHSS*AWPSAD Trigger: GTCTGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| 3UTR CAA 72 bp | TGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTaGCCTCCACAACAGCCCCAAGTCACCATAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLDTVPMLHFRR*PPQQPQVTIAH Trigger: ATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATCTGTCGGCCCACGCTaGGAGGCTTATTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPESVGPR*EAYFEG Trigger: TCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACTTCACAGGTGGGTCCTaGGGCTCCAGGGTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYFTGGS*GSRVSA Trigger: TGCAGAAACCCTGGAGCCTCAGGACCCACCTGTGAA...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGCTTCCGGTCATGAAATaGTACCAGCAGCTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQLPVMK*YQQLPN Trigger: ATTTGGAAGCTGCTGGTATCATTTCATGACCGGAAG...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAGGTGGAGCGAGTCATTaGGCCAGCCAATCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLGGASH*ASQSFP Trigger: AGGAAAAGATTGGCTGGCGCAATGACTCGCTCCACC...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACAGGTGGAGCGAGTCATTaGGCCAGCCAATCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IEMFRYSAYASLQKVASTGGASH*ASQSFP Trigger: AGGAAAAGATTGGCTGGCGCAATGACTCGCTCCACC...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAGGGAATGACAATGCCTaGCAGCTTGCTGTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLGNDNA*QLAVHS Trigger: GGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCC...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACACCTTGCAGGAATCCGTaGTCACCATATCCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IEMFRYSAYASLQKVASTPCRNP*SPYPHH Trigger: GTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGG...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTAGTCACCCCTTCCACTaGATGAAGGGTGACCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCSHPFH*MKGDPG Trigger: CCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACT...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATTCTGCAGACACACTTaGCACAGACACAGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLFCRHT*HRHSPH Trigger: GTGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACATTCTGCAGACACACTTaGCACAGACACAGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IEMFRYSAYASLQKVASTFCRHT*HRHSPH Trigger: GTGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAA...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGAGTCTGCTCACGCCCTaGTCTCAATTTAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQSLLTP*SQFKNQ Trigger: TTGGTTCTTAAATTGAGACCAGGGCGTGAGCAGACT...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCGTTTGGACATCTCTTTaGCCAGCCGGGAGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCVWTSL*PAGSQA Trigger: AGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAAC...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGTCCACATTCCGGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTGCATTTCTTTTGGTGTaGGAAGAGGACACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGPHSGGLGANCFVSVYFAFLLV*EEDTIV Trigger: AACAATGGTGTCCTCTTCCCACACCAAAAGAAATGC...AAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCGTCCCCCAGCCCCACTaGCTTTATGATGAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCVPQPH*LYDEVP Trigger: AGGAACCTCATCATAAAGCCAGTGGGGCTGGGGGAC...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGTACACACCCCACACTaGAAGGAGCCATTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEVHTPH*KEPFPL Trigger: CAATGGGAATGGCTCCTTCCAGTGTGGGGTGTGTAC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCTCCAGACAGGTGGGTaGAATTCTCCTGGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFLQTGG*NSPGST Trigger: GGTGCTCCCAGGAGAATTTCACCCACCTGTCTGGAG...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTCTCCAGACAGGTGGGTaGAATTCTCCTGGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCLQTGG*NSPGST Trigger: GGTGCTCCCAGGAGAATTTCACCCACCTGTCTGGAG...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGAGACAGGGTTTTCAATaGAGGGTAGTTGACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQRQGFQ*RVVDIL Trigger: AAGGATGTCAACTACCCTTCATTGAAAACCCTGTCT...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAATCTGTCGGCCCACGCTaGGAGGCTTATTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMKLFPGVSRNVIISPVESVGPR*EAYFEG Trigger: TCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGA...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAAGGCGGAGAGGTCCATaGGGTAATACAGATCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPERRRGP*GNTDLL Trigger: CAGTAGATCTGTATTACCTCATGGACCTCTCCGCCT...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCCTGTCCATTCCAAAATaGGAATCGGCATCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVLSIPK*ESASLT Trigger: TGTGAGTGATGCCGATTCTCATTTTGGAATGGACAG...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATTCCTGTGGTCCAAGTaGCAGAGTCCATCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLFLWSK*QSPSLG Trigger: TCCCAATGATGGACTCTGTCACTTGGACCACAGGAA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCTTCACAGGTGGGTCCTaGGGCTCCAGGGTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFFTGGS*GSRVSA Trigger: TGCAGAAACCCTGGAGCCTCAGGACCCACCTGTGAA...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCAAAAATCTTCCTCACTaGTGGTGGCACCAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVKNLPH*WWHQWL Trigger: AAGCCATTGGTGCCACCATCAGTGAGGAAGATTTTT...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATGAGCAGGATCGCCAGTaGCACCCCCAACATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSISMEIGMNCHACHEHYEQDRQ*HPQHDH Trigger: ATGATCATGTTGGGGGTGTCACTGGCGATCCTGCTC...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCAGGCTCCAGGGTTTCTaGAGACACACTTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCRLQGF*RHTCHR Trigger: TCTGTGGCAAGTGTGTCTGCAGAAACCCTGGAGCCT...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTATTGGGCCTGGCCATCTaGAGACAGGTAGCACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVVCNAAVTIRNETLQRLLGLAI*RQVALD Trigger: ATCGAGTGCTACCTGTCTGCAGATGGCCAGGCCCAA...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTTGGGTGAAATTCTCCTaGGAGCACCAGGCGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCWVKFS*EHQAQW Trigger: CCACTGCGCCTGGTGCTCCCAGGAGAATTTCACCCA...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACCCAGCTCCAGACAGGTaGGTGAAATTCTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYPAPDR*VKFSWE Trigger: CTCCCAGGAGAATTTCACCCACCTGTCTGGAGCTGG...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGTTTGGACATCTCTTTaGCCAGCCGGGAGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYVWTSL*PAGSQA Trigger: AGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAAC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGACAATTCAACAGACAGCTGTCAAAGCCTCCACTCACAAACACAGAGCGTTGGTGATTTCCTCTaGGGTTGTTTTCATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QADNSTDSCQSLHSQTQSVGDFL*GCFHKR Trigger: CCTTTTATGAAAACAACCCCAGAGGAAATCACCAAC...GCTCTGTGTTTGTGAGTGGAGGCTTTGACAGCTGTCTGTTGAATTGTCAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACTGGGAGCATTTCTTTTaGTGTGGGAAGAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDWEHFF*CGKRTP Trigger: TGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCA...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACCCGTACGGCGATAAGTaGCAGATGCACTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYPYGDK*QMHCPQ Trigger: TTGTGGGCAGTGCATCTGCCACTTATCGCCGTACGG...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTAAGAGTACAAGCCCATGACTTAATTTTCAATCTCTCACTTGGGAAGTCACCGTACGGCGATAAGTaGCAGATGCACTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRVQAHDLIFNLSLGKSPYGDK*QMHCPQ Trigger: TTGTGGGCAGTGCATCTGCCACTTATCGCCGTACGG...TGACTTCCCAAGTGAGAGATTGAAAATTAAGTCATGGGCTTGTACTCTTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTATCAGCACACTCTTCTTaGGCCTGGCCATCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVVCNAAVTIRNETLQRLSAHSS*AWPSAD Trigger: GTCTGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGA...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCGATCATGGGAATGTTTaGAGGTTTGGGGCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLSKIETKAVGTTLTVVDHGNV*RFGAVF Trigger: AAAGACTGCCCCAAACCTCCAAACATTCCCATGATC...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAACAGCCACCTTGGACGTaGTCATTCCTTCCTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TMKLFPGVSRNVIISPVEQPPWT*SFLPRS Trigger: ACTTCTAGGAAGGAATGATCACGTCCAAGGTGGCTG...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACTCTGTCGGCCCACGCTaGGAGGCTTATTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYSVGPR*EAYFEG Trigger: TCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGA...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAAAGGCGGAGAGGTCCATaGGGTAATACAGATCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TMKLFPGVSRNVIISPVERRRGP*GNTDLL Trigger: CAGTAGATCTGTATTACCTCATGGACCTCTCCGCCT...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGTCCATCATTGGGAATaGCAATGCCTGCCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYVHHWE*QCLPAC Trigger: GCAAGCTGGCAGGCATTGTCATTCCCAATGATGGAC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CTTTTAAGAGTACAAGCCCATGACTTAATTTTCAATCTCTCACTTGGGAAGTCAGCGGAGATGATCAGCTaGAGGATGTTCCCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRVQAHDLIFNLSLGKSAEMIS*RMFPES Trigger: GGATTCTGGGAACATCCTTCAGCTGATCATCTCCGC...TGACTTCCCAAGTGAGAGATTGAAAATTAAGTCATGGGCTTGTACTCTTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGAGCAGGATCGCCAGTaGCACCCCCAACATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFEQDRQ*HPQHDH Trigger: ATGATCATGTTGGGGGTGTCACTGGCGATCCTGCTC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACTCAGTTTGGCGGACCTaGACTTGCAGAGTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYSVWRT*TCRVCS Trigger: TGAGCAGACTCTGCAAGTGCAGGTCCGCCAAACTGA...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGGTGGAGCGAGTCATTaGGCCAGCCAATCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYGGASH*ASQSFP Trigger: AGGAAAAGATTGGCTGGCGCAATGACTCGCTCCACC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATGGGAATGACAATGCCTaGCAGCTTGCTGTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSISMEIGMNCHACHEHYGNDNA*QLAVHS Trigger: GGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCC...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGGTAATACAGATCTACTaGGTAATCTTCAGTTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQVIQIY*VIFSLA Trigger: CGCCAAACTGAAGATTACCCAGTAGATCTGTATTAC...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAAGTTGCTGGTTAGTTTaGACATCTCTTTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLSCWLV*TSLWPA Trigger: GGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACT...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATGGGAGCATTTCTTTTaGTGTGGGAAGAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLWEHFF*CGKRTP Trigger: TGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGTCCCCCAGCCCCACTaGCTTTATGATGAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFVPQPH*LYDEVP Trigger: AGGAACCTCATCATAAAGCCAGTGGGGCTGGGGGAC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGTACACACCCCACACTaGAAGGAGCCATTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYVHTPH*KEPFPL Trigger: CAATGGGAATGGCTCCTTCCAGTGTGGGGTGTGTAC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACGATCATGGGAATGTTTaGAGGTTTGGGGCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDDHGNV*RFGAVF Trigger: AAAGACTGCCCCAAACCTCCAAACATTCCCATGATC...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| 3UTR CAA 72 bp | AATTCTTCAGTGAACAGAAGCACTACTGTTAATGTTTaGGCTCTTTCAAGGTCCTGCCTTGGGTCAAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSVNRSTTVNV*ALSRSCLGSKR Trigger: CCGTTTTGACCCAAGGCAGGACCTTGAAAGAGCCAAAACATTAACAGTAGTGCTTCTGTTCACTGAAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACCAGCCACCTTGGACGTaGTCATTCCTTCCTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYQPPWT*SFLPRS Trigger: ACTTCTAGGAAGGAATGATCACGTCCAAGGTGGCTG...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACTCCTCACAATTTCATTaGATCTCTCGGCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDSSQFH*ISRHHQ Trigger: CTGATGATGCCGAGAGATTCAATGAAATTGTGAGGA...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAACGGTTGCTCCAGGAATaGGTTTTGCATAGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPERLLQE*VLHSSH Trigger: ATGAGAACTATGCAAAACTCATTCCTGGAGCAACCG...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGCGGAGATGATCAGCTaGAGGATGTTCCCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFAEMIS*RMFPES Trigger: GGATTCTGGGAACATCCTTCAGCTGATCATCTCCGC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAAAAAATCTTCCTCACTaGTGGTGGCACCAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLKNLPH*WWHQWL Trigger: AAGCCATTGGTGCCACCATCAGTGAGGAAGATTTTT...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACTTCCGGTCATGAAATaGTACCAGCAGCTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLLPVMK*YQQLPN Trigger: ATTTGGAAGCTGCTGGTATCATTTCATGACCGGAAG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAACTTCCGGTCATGAAATaGTACCAGCAGCTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPELPVMK*YQQLPN Trigger: ATTTGGAAGCTGCTGGTATCATTTCATGACCGGAAG...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGGGAATGACAATGCCTaGCAGCTTGCTGTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFGNDNA*QLAVHS Trigger: GGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTTCCAGGAATGAGTTTTaGATAGTTCTCATACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKSLWENWILSVDGKSDSSRNEF*IVLIQM Trigger: CATCTGTATGAGAACTATGCAAAACTCATTCCTGGA...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCCTTGCAGGAATCCGTaGTCACCATATCCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFPCRNP*SPYPHH Trigger: GTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGG...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCTTCTGCAGACACACTTaGCACAGACACAGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFFCRHT*HRHSPH Trigger: GTGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAA...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCAGGCTCCAGGGTTTCTaGAGACACACTTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFRLQGF*RHTCHR Trigger: TCTGTGGCAAGTGTGTCTGCAGAAACCCTGGAGCCT...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCAGTTGCTGGTTAGTTTaGACATCTCTTTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCSCWLV*TSLWPA Trigger: GGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACT...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCAGCCACCTTGGACGTaGTCATTCCTTCCTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFQPPWT*SFLPRS Trigger: ACTTCTAGGAAGGAATGATCACGTCCAAGGTGGCTG...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAAGACAGGGTTTTCAATaGAGGGTAGTTGACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLRQGFQ*RVVDIL Trigger: AAGGATGTCAACTACCCTTCATTGAAAACCCTGTCT...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCAGGCGGAGAGGTCCATaGGGTAATACAGATCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFRRRGP*GNTDLL Trigger: CAGTAGATCTGTATTACCTCATGGACCTCTCCGCCT...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATCCTCACAATTTCATTaGATCTCTCGGCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLSSQFH*ISRHHQ Trigger: CTGATGATGCCGAGAGATTCAATGAAATTGTGAGGA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTTTCCTGTGGTCCAAGTaGCAGAGTCCATCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCFLWSK*QSPSLG Trigger: TCCCAATGATGGACTCTGTCACTTGGACCACAGGAA...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATTTGAAGGACTTCTATaGGGGAGACAGGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEFEGLL*GRQGFQ Trigger: TTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACAGCAGCCTGCATGATTaGATCAAATCCACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYSSLHD*IKSTFR Trigger: CCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTTTACACACAGCAGCCTaGATGATTGCATCAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGANCFVSVYFQTKTVLHTAA*MIASNP Trigger: TGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAA...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCAGTAGTTGACATCCTTTaGCTAAAAGATTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSVVDIL*LKDSLG Trigger: CCCCAGCGAATCTTTTAGCCAAAGGATGTCAACTAC...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACGTTGGTGATTTCCTCTaGGGTTGTTTTCATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIVSNQRTMSHLHALNDVGDFL*GCFHKR Trigger: CCTTTTATGAAAACAACCCCAGAGGAAATCACCAAC...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGCATTTCTTTTGGTGTaGGAAGAGGACACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEAFLLV*EEDTIV Trigger: AACAATGGTGTCCTCTTCCCACACCAAAAGAAATGC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGTTTCTATTTCTCTCTaGCAGTCGCAGTCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEVSISL*QSQSHS Trigger: AGAATGTGACTGCGACTGCCAGAGAGAAATAGAAAC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACAGTTTCTATTTCTCTCTaGCAGTCGCAGTCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEMFRYSAYASLQKVASTVSISL*QSQSHS Trigger: AGAATGTGACTGCGACTGCCAGAGAGAAATAGAAAC...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAATCCTCACAATTTCATTaGATCTCTCGGCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMKLFPGVSRNVIISPVESSQFH*ISRHHQ Trigger: CTGATGATGCCGAGAGATTCAATGAAATTGTGAGGA...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR TCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACCTGTCCATTCCAAAATaGGAATCGGCATCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYLSIPK*ESASLT Trigger: TGTGAGTGATGCCGATTCTCATTTTGGAATGGACAG...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | ATCAAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTGTCCATTCCAAAATaGGAATCGGCATCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IKVVCNAAVTIRNETLQRLSIPK*ESASLT Trigger: TGTGAGTGATGCCGATTCTCATTTTGGAATGGACAG...TCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCTTTGAAGGACTTCTATaGGGGAGACAGGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCFEGLL*GRQGFQ Trigger: TTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAA...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTAGCAGCCTGCATGATTaGATCAAATCCACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCSSLHD*IKSTFR Trigger: CCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCT...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCATTACACACAGCAGCCTaGATGATTGCATCAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSLHTAA*MIASNP Trigger: TGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAA...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGTAGTTGACATCCTTTaGCTAAAAGATTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYVVDIL*LKDSLG Trigger: CCCCAGCGAATCTTTTAGCCAAAGGATGTCAACTAC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTAAGTCTGCTCACGCCCTaGTCTCAATTTAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVVCNAAVTIRNETLQRLSLLTP*SQFKNQ Trigger: TTGGTTCTTAAATTGAGACCAGGGCGTGAGCAGACT...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAGTAATACAGATCTACTaGGTAATCTTCAGTTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLVIQIY*VIFSLA Trigger: CGCCAAACTGAAGATTACCCAGTAGATCTGTATTAC...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACCAAGACAGTTGACATaGAATATTCATTCCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLPRQLT*NIHSCG Trigger: ACCACAGGAATGAATATTCCATGTCAACTGTCTTGG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATCTCCAACTTTCATGTaGGAGCATTTCTTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPESPTFM*EHFFWC Trigger: ACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATCTCCAACTTTCATGTaGGAGCATTTCTTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHLHALNDWLLNDLLLSPTFM*EHFFWC Trigger: ACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGATCATGGGAATGTTTaGAGGTTTGGGGCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYDHGNV*RFGAVF Trigger: AAAGACTGCCCCAAACCTCCAAACATTCCCATGATC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTCGGTTGCTCCAGGAATaGGTTTTGCATAGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCRLLQE*VLHSSH Trigger: ATGAGAACTATGCAAAACTCATTCCTGGAGCAACCG...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTAAAAATCTTCCTCACTaGTGGTGGCACCAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCKNLPH*WWHQWL Trigger: AAGCCATTGGTGCCACCATCAGTGAGGAAGATTTTT...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAAGACAGAAGTATCCTTTaGAAAATCTTCCTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLDCFQSANNVSPSCPEDRSIL*KIFLTD Trigger: ATCAGTGAGGAAGATTTTTCAAAGGATACTTCTGTC...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR TCA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTGACAGAAGTATCCTTTaGAAAATCTTCCTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLGANCFVSVYFQTKTVDRSIL*KIFLTD Trigger: ATCAGTGAGGAAGATTTTTCAAAGGATACTTCTGTC...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR GCA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACTTACACACAGCAGCCTaGATGATTGCATCAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIILSRPPFEATKHDKPYLHTAA*MIASNP Trigger: TGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAA...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCAGTCTGCTCACGCCCTaGTCTCAATTTAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFSLLTP*SQFKNQ Trigger: TTGGTTCTTAAATTGAGACCAGGGCGTGAGCAGACT...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCGTTGGTGATTTCCTCTaGGGTTGTTTTCATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCVGDFL*GCFHKR Trigger: CCTTTTATGAAAACAACCCCAGAGGAAATCACCAAC...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCACCAAGACAGTTGACATaGAATATTCATTCCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSPRQLT*NIHSCG Trigger: ACCACAGGAATGAATATTCCATGTCAACTGTCTTGG...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATGCATTTCTTTTGGTGTaGGAAGAGGACACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSISMEIGMNCHACHEHYAFLLV*EEDTIV Trigger: AACAATGGTGTCCTCTTCCCACACCAAAAGAAATGC...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCATCTCCAACTTTCATGTaGGAGCATTTCTTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSSPTFM*EHFFWC Trigger: ACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGA...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR TCA 90 bp | GCTTTCAGACCTGAGGATATTGCTATAGGCTTAGGGAAAATAGTGTTAACATCAGACAGAAGTATCCTTTaGAAAATCTTCCTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AFRPEDIAIGLGKIVLTSDRSIL*KIFLTD Trigger: ATCAGTGAGGAAGATTTTTCAAAGGATACTTCTGTC...TGATGTTAACACTATTTTCCCTAAGCCTATAGCAATATCCTCAGGTCTGAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCTTTGAAGGACTTCTATaGGGGAGACAGGGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFFEGLL*GRQGFQ Trigger: TTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAA...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS-3UTR GCA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCTCCAGGAATGAGTTTTaGATAGTTCTCATACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVNINLFRQMNPKAQCVCSRNEF*IVLIQM Trigger: CATCTGTATGAGAACTATGCAAAACTCATTCCTGGA...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CCA 90 bp | ATCAAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACCAAGACAGTTGACATaGAATATTCATTCCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKVVCNAAVTIRNETLQRPRQLT*NIHSCG Trigger: ACCACAGGAATGAATATTCCATGTCAACTGTCTTGG...TCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR CCA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTGTTTCTATTTCTCTCTaGCAGTCGCAGTCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCVSISL*QSQSHS Trigger: AGAATGTGACTGCGACTGCCAGAGAGAAATAGAAAC...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR GCA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCTCCAGGAATGAGTTTTaGATAGTTCTCATACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGILNSSLCLGYSFLDCFSRNEF*IVLIQM Trigger: CATCTGTATGAGAACTATGCAAAACTCATTCCTGGA...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS TCA 90 bp | GTGGCAGATGCACTGCCCACAATAGCAGTCACCCCTTCCACTGCATaGAGGGTGACCCGGGGACTCCTTGCAGGAATCCGTGCTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VADALPTIAVTPSTA*RVTRGLLAGIRAHH Trigger: ATGGTGAGCACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACTGCTATTGTGGGCAGTGCATCTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | TTCCACTGCATGAAGGGTGACCCGGGGACTCCTTGCAGGAATCCGTaGTCACCATATCCTCACCACACTCGCAGTGAGGACCCATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHCMKGDPGTPCRNP*SPYPHHTRSEDPCG Trigger: GCCACATGGGTCCTCACTGCGAGTGTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | AGCAGTCACCCCTTCCACTGCATGAAGGGTGACCCGGGGACTCCTTaGAGGAATCCGTGCTCACCATATCCTCACCACACTCGCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPFHCMKGDPGTP*RNPCSPYPHHTRSE Trigger: CTCACTGCGAGTGTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | ATAAGTGGCAGATGCACTGCCCACAATAGCAGTCACCCCTTCCACTaGATGAAGGGTGACCCGGGGACTCCTTGCAGGAATCCGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISGRCTAHNSSHPFH*MKGDPGTPCRNPCS Trigger: TGAGCACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACTGCTATTGTGGGCAGTGCATCTGCCACTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | GGCAGTAAGGTCCGTAGATGCTTCCGTACGGCGATAAGTGGCAGATaGACTGCCCACAATAGCAGTCACCCCTTCCACTGCATGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSKVRRCFRTAISGR*TAHNSSHPFHCMKG Trigger: ACCCTTCATGCAGTGGAAGGGGTGACTGCTATTGTGGGCAGTGCATCTGCCACTTATCGCCGTACGGAAGCATCTACGGACCTTACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | GGTTTCTGCAGACACACTTGCCACAGACACAGTCCCCACGTCCACTaGACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFCRHTCHRHSPHVH*TALHPQMYTSPCWL Trigger: CAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGTGCAGTGGACGTGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CCA 90 bp | GTCCACTGCACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTTaGTTGTACAGTTACAGTATTCACCTGTCCAGCCATCCCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VHCTALHPQMYTSPC*LYSYSIHLSSHPGT Trigger: TGTGCCGGGATGGCTGGACAGGTGAATACTGTAACTGTACAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGTGCAGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS-3UTR CAA 90 bp | TGGCATGCCCACCTCCTGAAGCTGGGATGTGTGTTCTGGGTGGTACATACGGGACTCATACAGATGGACTaGTTCTTGGGTGACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WHAHLLKLGCVFWVVHTGLIQMD*FLGDCK Trigger: TTTGCAGTCACCCAAGAACAAGTCCATCTGTATGAG...TCCCGTATGTACCACCCAGAACACACATCCCAGCTTCAGGAGGTGGGCATGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS TCA 90 bp | GGGTTGCAGGTACACACCCCACACTGGAAGGAGCCATTCCCATTGTaGCACTTAGAGCTGTTAGTTTCTATTTCTCTCTGGCAGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLQVHTPHWKEPFPL*HLELLVSISLWQSQ Trigger: CTGCGACTGCCAGAGAGAAATAGAAACTAACAGCTCTAAGTGTCACAATGGGAATGGCTCCTTCCAGTGTGGGGTGTGTACCTGCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS-3UTR CAA 90 bp | CTTTTTAGAGCAAGTGGGTGGCATGCCCACCTCCTGAAGCTGGGATGTGTGTTCAAGTTGCTGGTTAGTTaGGACATCTCTTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFRASGWHAHLLKLGCVFKLLVS*DISLAS Trigger: GCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTT...GAACACACATCCCAGCTTCAGGAGGTGGGCATGCCACCCACTTGCTCTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | ACCGGTCCACATTCCGGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTAGGTGGAGCGAGTCATaGCGCCAGCCAATCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGPHSGGLGANCFVSVYFRWSES*RQPIFS Trigger: GGAAAAGATTGGCTGGCGCAATGACTCGCTCCACCT...AAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS GCA 90 bp | CCTGTGGTCCAAGTGACAGAGTCCATCATTGGGAATGACAATGCCTaGCAGCTTGCTGTCCATTCCAAAATGAGAATCGGCATCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVVQVTESIIGNDNA*QLAVHSKMRIGITH Trigger: GTGAGTGATGCCGATTCTCATTTTGGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCCAATGATGGACTCTGTCACTTGGACCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS-3UTR CAA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGCGGGAGCCAAGCTCTTaGATGGTGTTGAGGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQREPSS*MVLRSS Trigger: TGACGACCTCAACACCATCAAAGAGCTTGGCTCCCG...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCAGTTTGGACATCTCTTaGGCCAGCCGGGAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLSKIETKAVGTTLTVVSLDIS*ASREPS Trigger: GCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACT...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CAA 90 bp | ACCGGTCCACATTCCGGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTTTTCTGCAGACACACTaGCCACAGACACAGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPHSGGLGANCFVSVYFFLQTH*PQTQSP Trigger: TGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAAA...AAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTGAGGAAAGGCCTGCTTaGTGCTTCTCCCTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKSLWENWILSVDGKSDSEERPA*CFSLCL Trigger: CAAGCACAGGGAGAAGCACAAAGCAGGCCTTTCCTC...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACCCAGGCACAGCCACCTaGGACGTGATCATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDPGTAT*DVIIPS Trigger: GGAAGGAATGATCACGTCCAAGGTGGCTGTGCCTGG...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | CTTCACTTCAGAAGGTTGCCTCCACAACAGCCCCAAGTCACCATAGCTCATACTAAGTTGCTGGTTAGTTaGGACATCTCTTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHFRRLPPQQPQVTIAHTKLLVS*DISLAS Trigger: GCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTT...AGTATGAGCTATGGTGACTTGGGGCTGTTGTGGAGGCAACCTTCTGAAGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CAA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGCCACAGAGAAGGCCTTaGTGTCTCAGACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQPQRRP*CLRQEK Trigger: CTTCTCCTGTCTGAGACACAAAGGCCTTCTCTGTGG...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS TCA 90 bp | ATGTCAGAACTGTTCTTCTGTCGGCCCACGCTGAGAGGCTTATTTTaGAGGACTTCTATGCGGGAGACAGGGTTTTCAATGAAGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSELFFCRPTLRGLF*RTSMRETGFSMKGS Trigger: ACTACCCTTCATTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGAAGAACAGTTCTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 90 bp | GAGCAATCTGAACAATGTCAGAACTGTTCTTCTGTCGGCCCACGCTaGGAGGCTTATTTTGAAGGACTTCTATGCGGGAGACAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EQSEQCQNCSSVGPR*EAYFEGLLCGRQGF Trigger: AAAACCCTGTCTCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGAAGAACAGTTCTGACATTGTTCAGATTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS-3UTR CAA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACACCAGGCACAGCCACCTaGGACGTGATCATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IEMFRYSAYASLQKVASTPGTAT*DVIIPS Trigger: GGAAGGAATGATCACGTCCAAGGTGGCTGTGCCTGG...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CAA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTACGCTCACAGTCACATaGAAGGATGCTGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKSLWENWILSVDGKSDSTLTVT*KDAVSP Trigger: TGGAGACACAGCATCCTTCAATGTGACTGTGAGCGT...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS CCA 90 bp | GGATGCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTTGGTGTaGGAAGAGGACACCATTGTTACAGAGAGCTGTGAAAGACAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCCVSNFHVGAFLLV*EEDTIVTESCERQV Trigger: AACCTGTCTTTCACAGCTCTCTGTAACAATGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACGGGAGCCAAGCTCTTaGATGGTGTTGAGGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLREPSS*MVLRSS Trigger: TGACGACCTCAACACCATCAAAGAGCTTGGCTCCCG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACAAGGTGGAGCGAGTCATaGCGCCAGCCAATCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IEMFRYSAYASLQKVASTRWSES*RQPIFS Trigger: GGAAAAGATTGGCTGGCGCAATGACTCGCTCCACCT...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACCCACAGAGAAGGCCTTaGTGTCTCAGACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDPQRRP*CLRQEK Trigger: CTTCTCCTGTCTGAGACACAAAGGCCTTCTCTGTGG...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTGTTCCCGTTTGCCACTaGGCCTTAGAGCGTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLGANCFVSVYFQTKTVVPVCH*ALERSA Trigger: AGCAGAACGCTCTAAGGCCAAGTGGCAAACGGGAAC...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS TCA 90 bp | AATATTCATTCCTGTGGTCCAAGTGACAGAGTCCATCATTGGGAATaGCAATGCCTGCCAGCTTGCTGTCCATTCCAAAATGAGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: NIHSCGPSDRVHHWE*QCLPACCPFQNENR Trigger: CCGATTCTCATTTTGGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCCAATGATGGACTCTGTCACTTGGACCACAGGAATGAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 90 bp | TATTCCAAGACAGTTGACATGGAATATTCATTCCTGTGGTCCAAGTaGCAGAGTCCATCATTGGGAATGACAATGCCTGCCAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSKTVDMEYSFLWSK*QSPSLGMTMPASLL Trigger: CAGCAAGCTGGCAGGCATTGTCATTCCCAATGATGGACTCTGTCACTTGGACCACAGGAATGAATATTCCATGTCAACTGTCTTGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 90 bp | GCTTCTTTTCTCACAGTTGGATACGCTCACAGTCACATTGAAGGATaGTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTTGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASFLTVGYAHSHIEG*CVSNFHVGAFLLVW Trigger: CCACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAATGTGACTGTGAGCGTATCCAACTGTGAGAAAAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CCA 90 bp | TTGAAGGATGCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTTaGTGTGGGAAGAGGACACCATTGTTACAGAGAGCTGTGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKDAVSPTFMWEHFF*CGKRTPLLQRAVKD Trigger: GTCTTTCACAGCTCTCTGTAACAATGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTGTACTCCCTACCAGGCACAGCCACCTaGGACGTGATCATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGSKGDSLRLLNLAVYSLPGTAT*DVIIPS Trigger: GGAAGGAATGATCACGTCCAAGGTGGCTGTGCCTGG...TAGGGAGTACACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACAGTTTGGACATCTCTTaGGCCAGCCGGGAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VIILSRPPFEATKHDKPYSLDIS*ASREPS Trigger: GCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS-3UTR CAA 90 bp | ATCAAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGAAGTTTGGACATCTCTTaGGCCAGCCGGGAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IKVVCNAAVTIRNETLQRSLDIS*ASREPS Trigger: GCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACT...TCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTCACTCTGGGAGAACTGGATTCTTTCAGTTGATGGGAAATCAGACTCTAAGCCCAGTCTAAAGTaGCTGGTTAGTTTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: GKSLWENWILSVDGKSDSKPSLK*LVSLDI Trigger: GATGTCCAAACTAACCAGCAACTTTAGACTGGGCTT...AGAGTCTGATTTCCCATCAACTGAAAGAATCCAGTTCTCCCAGAGTGACTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | TTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCCTGCGTTTTCTCCAGCTCATACAGATGGACTaGTTCTTGGGTGACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFRQMNPKAQCVCLRFLQLIQMD*FLGDCK Trigger: TTTGCAGTCACCCAAGAACAAGTCCATCTGTATGAG...CTGGAGAAAACGCAGGCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACACGCTCACAGTCACATaGAAGGATGCTGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDTLTVT*KDAVSP Trigger: TGGAGACACAGCATCCTTCAATGTGACTGTGAGCGT...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACCACAGAGAAGGCCTTaGTGTCTCAGACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLPQRRP*CLRQEK Trigger: CTTCTCCTGTCTGAGACACAAAGGCCTTCTCTGTGG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATTTCTGCAGACACACTaGCCACAGACACAGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLDCFQSANNVSPSCPEFLQTH*PQTQSP Trigger: TGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAAA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS TCA 90 bp | GGTTCCTGCTTCTTTTCTCACAGTTGGATACGCTCACAGTCACATTaGAGGATGCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSCFFSHSWIRSQSH*RMLCLQLSCGSISF Trigger: AAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAATGTGACTGTGAGCGTATCCAACTGTGAGAAAAGAAGCAGGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS TCA 90 bp | GTAGAGAGCAGGAGACAGAAGTATCCTTTGAAAAATCTTCCTCACTaGTGGTGGCACCAATGGCTTTACACTTGTCAGCACACTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VESRRQKYPLKNLPH*WWHQWLYTCQHTLL Trigger: AAGAAGAGTGTGCTGACAAGTGTAAAGCCATTGGTGCCACCATCAGTGAGGAAGATTTTTCAAAGGATACTTCTGTCTCCTGCTCTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGGTTTGTAATGCAGCAGTAACTATAAGAAATGAAACCCTCCAGAGACTACGGGAGCCAAGCTCTTaGATGGTGTTGAGGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVVCNAAVTIRNETLQRLREPSS*MVLRSS Trigger: TGACGACCTCAACACCATCAAAGAGCTTGGCTCCCG...TAGTCTCTGGAGGGTTTCATTTCTTATAGTTACTGCTGCATTACAAACCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACAGGTGGAGCGAGTCATaGCGCCAGCCAATCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VIILSRPPFEATKHDKPYRWSES*RQPIFS Trigger: GGAAAAGATTGGCTGGCGCAATGACTCGCTCCACCT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACCAGATGGACTTGTTCTaGGGTGACTGCAAAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDQMDLF*GDCKDQ Trigger: CTGATCTTTGCAGTCACCCAAGAACAAGTCCATCTG...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACCATGAAATTGTTTCCAGGGGTCTCTAGAAATGTAATTATCTCTCCTGTGGAATTTCTGCAGACACACTaGCCACAGACACAGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TMKLFPGVSRNVIISPVEFLQTH*PQTQSP Trigger: TGGGGACTGTGTCTGTGGCAAGTGTGTCTGCAGAAA...TTCCACAGGAGAGATAATTACATTTCTAGAGACCCCTGGAAACAATTTCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGAGGAAAGGCCTGCTTaGTGCTTCTCCCTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VIILSRPPFEATKHDKPYEERPA*CFSLCL Trigger: CAAGCACAGGGAGAAGCACAAAGCAGGCCTTTCCTC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS GCA 90 bp | ATTGCGCCAGCCAATCTTTTCCTTACACACAGCAGCCTGCATGATTaGATCAAATCCACCTTCAGGTGTGTCAATATTAGCAGAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IAPANLFLTHSSLHD*IKSTFRCVNISRNL Trigger: AAGATTTCTGCTAATATTGACACACCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAAGGAAAAGATTGGCTGGCGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAAGCTCTTTGATGGTGTaGAGGTCGTCATCCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLSSLMV*RSSSIE Trigger: CTCTATGGATGACGACCTCAACACCATCAAAGAGCT...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTAGCTCTTTGATGGTGTaGAGGTCGTCATCCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGLGANCFVSVYFQTKTVSSLMV*RSSSIE Trigger: CTCTATGGATGACGACCTCAACACCATCAAAGAGCT...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ATAGAAATGTTTAGATACAGTGCCTATGCTTCACTTCAGAAGGTTGCCTCCACAAGCTCTTTGATGGTGTaGAGGTCGTCATCCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IEMFRYSAYASLQKVASTSSLMV*RSSSIE Trigger: CTCTATGGATGACGACCTCAACACCATCAAAGAGCT...TGTGGAGGCAACCTTCTGAAGTGAAGCATAGGCACTGTATCTAAACATTTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTAAAGTTGCTGGTTAGTTaGGACATCTCTTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLKLLVS*DISLAS Trigger: GCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTT...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACAGATGGACTTGTTCTaGGGTGACTGCAAAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLQMDLF*GDCKDQ Trigger: CTGATCTTTGCAGTCACCCAAGAACAAGTCCATCTG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCACGCTCACAGTCACATaGAAGGATGCTGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVNINLFRQMNPKAQCVCTLTVT*KDAVSP Trigger: TGGAGACACAGCATCCTTCAATGTGACTGTGAGCGT...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACGGAATGTTTGGAGGTTaGGGGCAGTCTTTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDGMFGG*GQSFSL Trigger: CAATGAAAAAGACTGCCCCAAACCTCCAAACATTCC...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGTTCCCGTTTGCCACTaGGCCTTAGAGCGTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGILNSSLCLGYSFLDCFVPVCH*ALERSA Trigger: AGCAGAACGCTCTAAGGCCAAGTGGCAAACGGGAAC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATCATACCGTTTGCCACTaGGCCTTAGAGCGTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSISMEIGMNCHACHEHYHTVCH*ALERSA Trigger: AGCAGAACGCTCTAAGGCCAAGTGGCAAACGGTATG...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTCTAAGCAAGATAGAAACTAAAGCTGTTGGGACTACACTGACAGTGGTCTTCCTCACAATTTCATaGAATCTCTCGGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSKIETKAVGTTLTVVFLTIS*NLSASS Trigger: TGATGATGCCGAGAGATTCAATGAAATTGTGAGGAA...GACCACTGTCAGTGTAGTCCCAACAGCTTTAGTTTCTATCTTGCTTAGAGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTACTCATACAGATGGACTaGTTCTTGGGTGACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLLIQMD*FLGDCK Trigger: TTTGCAGTCACCCAAGAACAAGTCCATCTGTATGAG...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCTAGGTGCTAATTGTTTTGTGTCAGTATACTTTCAAACTAAGACAGTTGGAATGTTTGGAGGTTaGGGGCAGTCTTTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLGANCFVSVYFQTKTVGMFGG*GQSFSL Trigger: CAATGAAAAAGACTGCCCCAAACCTCCAAACATTCC...AACTGTCTTAGTTTGAAAGTATACTGACACAAAACAATTAGCACCTAGGCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACGCTGAGAGGCTTATTTaGAAGGACTTCTATGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VIILSRPPFEATKHDKPYAERLI*KDFYAG Trigger: TCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGC...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCAAGCCCAGTCTAAAGTaGCTGGTTAGTTTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SVNINLFRQMNPKAQCVCKPSLK*LVSLDI Trigger: GATGTCCAAACTAACCAGCAACTTTAGACTGGGCTT...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATCAGATGGACTTGTTCTaGGGTGACTGCAAAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSISMEIGMNCHACHEHYQMDLF*GDCKDQ Trigger: CTGATCTTTGCAGTCACCCAAGAACAAGTCCATCTG...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCGTACACGAGTCCCTGTaGGTTGTACAGTTACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SVNINLFRQMNPKAQCVCVHESL*VVQLQY Trigger: ATACTGTAACTGTACAACCAACAGGGACTCGTGTAC...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | TTGGACCATTCAGGGATCCAAAGGAGATTCATTAAGACTTTTAAATTTAGCTGTGCTGAGAGGCTTATTTaGAAGGACTTCTATGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDHSGIQRRFIKTFKFSCAERLI*KDFYAG Trigger: TCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGC...ACAGCTAAATTTAAAAGTCTTAATGAATCTCCTTTGGATCCCTGAATGGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | TTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATGACTTTAAGAACCAAGCTTaGAGGAGCAATCTGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLIVSNQRTMSHLHALNDFKNQA*RSNLNN Trigger: ATTGTTCAGATTGCTCCTCAAAGCTTGGTTCTTAAA...GTCATTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACCATACAAGCCCAGTCTAAAGTaGCTGGTTAGTTTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: VIILSRPPFEATKHDKPYKPSLK*LVSLDI Trigger: GATGTCCAAACTAACCAGCAACTTTAGACTGGGCTT...GTATGGTTTATCATGCTTTGTCGCTTCAAAAGGAGGTCGACTTAAGATAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCTGTTATTATTCCTCACAATTTCATaGAATCTCTCGGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TMSHLHALNDWLLNDLLLFLTIS*NLSASS Trigger: TGATGATGCCGAGAGATTCAATGAAATTGTGAGGAA...TAATAACAGGTCATTCAACAACCAGTCATTCAGGGCATGAAGGTGAGACATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCTTGATTGTTTCCAATCAGCGAACAATGTCTCACCTTCATGCCCTGAATTCCTCACAATTTCATaGAATCTCTCGGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLDCFQSANNVSPSCPEFLTIS*NLSASS Trigger: TGATGATGCCGAGAGATTCAATGAAATTGTGAGGAA...TTCAGGGCATGAAGGTGAGACATTGTTCGCTGATTGGAAACAATCAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATTTCCATGGAAATTGGCATGAACTGTCATGCTTGCCATGAACATTATGGAATGTTTGGAGGTTaGGGGCAGTCTTTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TSISMEIGMNCHACHEHYGMFGG*GQSFSL Trigger: CAATGAAAAAGACTGCCCCAAACCTCCAAACATTCC...ATAATGTTCATGGCAAGCATGACAGTTCATGCCAATTTCCATGGAAATACTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCGTACACGAGTCCCTGTaGGTTGTACAGTTACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QGILNSSLCLGYSFLDCFVHESL*VVQLQY Trigger: ATACTGTAACTGTACAACCAACAGGGACTCGTGTAC...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAACATCAATTTATTTAGGCAGATGAACCCAAAGGCACAGTGTGTTTGCTTTAAGAACCAAGCTTaGAGGAGCAATCTGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVNINLFRQMNPKAQCVCFKNQA*RSNLNN Trigger: ATTGTTCAGATTGCTCCTCAAAGCTTGGTTCTTAAA...GCAAACACACTGTGCCTTTGGGTTCATCTGCCTAAATAAATTGATGTTAACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGATCTTGAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCTTTAAGAACCAAGCTTaGAGGAGCAATCTGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGILNSSLCLGYSFLDCFFKNQA*RSNLNN Trigger: ATTGTTCAGATTGCTCCTCAAAGCTTGGTTCTTAAA...GAAACAATCAAGAAAAGAATATCCCAAGCAAAGAGATGAATTCAAGATCCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
||
| CDS TCA 72 bp | GCACCAGGCGCAGTGGGGTCCTGTGAGCAGGCAGTCTaGGCAGCTTTCTGCACCACCCCAGGCACAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: APGAVGSCEQAV*AAFCTTPGTAT Trigger: GGTGGCTGTGCCTGGGGTGGTGCAGAAAGCTGCTCAGACTGCCTGCTCACAGGACCCCACTGCGCCTGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS CCA 72 bp | GCTGGGGTGTCGCACCTCTCGCCAGCTCCAGACAGGTaGGTGAAATTCTCCTGGGAGCACCAGGCGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGVSHLSPAPDR*VKFSWEHQAQW Trigger: CCACTGCGCCTGGTGCTCCCAGGAGAATTTCACCCACCTGTCTGGAGCTGGCGAGAGGTGCGACACCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS CCA 72 bp | CTCTCGCCAGCTCCAGACAGGTGGGTGAAATTCTCCTaGGAGCACCAGGCGCAGTGGGGTCCTGTGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPAPDRWVKFS*EHQAQWGPVSR Trigger: CCTGCTCACAGGACCCCACTGCGCCTGGTGCTCCCAGGAGAATTTCACCCACCTGTCTGGAGCTGGCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS TCA 72 bp | GCACTGCCCACAATAGCAGTCACCCCTTCCACTGCATaGAGGGTGACCCGGGGACTCCTTGCAGGAATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALPTIAVTPSTA*RVTRGLLAGIR Trigger: ACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACTGCTATTGTGGGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS GCA 72 bp | ATGAAGGGTGACCCGGGGACTCCTTGCAGGAATCCGTaGTCACCATATCCTCACCACACTCGCAGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MKGDPGTPCRNP*SPYPHHTRSED Trigger: GTCCTCACTGCGAGTGTGGTGAGGATATGGTGAGCACGGATTCCTGCAAGGAGTCCCCGGGTCACCCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
||
| CDS GCA 72 bp | AGATGCACTGCCCACAATAGCAGTCACCCCTTCCACTaGATGAAGGGTGACCCGGGGACTCCTTGCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RCTAHNSSHPFH*MKGDPGTPCRN Trigger: ATTCCTGCAAGGAGTCCCCGGGTCACCCTTCATGCAGTGGAAGGGGTGACTGCTATTGTGGGCAGTGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | TCTTTGGCCAGCCGGGAGCCAAGCTCTTTGATGGTGTaGAGGTCGTCATCCATAGAGGCGGAGAGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLASREPSSLMV*RSSSIEAERSM Trigger: CATGGACCTCTCCGCCTCTATGGATGACGACCTCAACACCATCAAAGAGCTTGGCTCCCGGCTGGCCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | TTGGACATCTCTTTGGCCAGCCGGGAGCCAAGCTCTTaGATGGTGTTGAGGTCGTCATCCATAGAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LDISLASREPSS*MVLRSSSIEAE Trigger: CTCCGCCTCTATGGATGACGACCTCAACACCATCAAAGAGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | CTGGTTAGTTTGGACATCTCTTTGGCCAGCCGGGAGCCAAGCTCTTaGATGGTGTTGAGGTCGTCATCCATAGAGGCGGAGAGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVSLDISLASREPSS*MVLRSSSIEAERSM Trigger: CATGGACCTCTCCGCCTCTATGGATGACGACCTCAACACCATCAAAGAGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACTAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | CGTCCACTGCACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTaGGTTGTACAGTTACAGTATTCACCTGTCCAGCCATCCCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLHSTPSSDVHESL*VVQLQYSPVQPSRH Trigger: GTGCCGGGATGGCTGGACAGGTGAATACTGTAACTGTACAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGTGCAGTGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | CTATTTCTCTCTGGCAGTCGCAGTCACATTCTGCACTaGCGAGTATTTCTAGGGTGTCCCCCAGCCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLSGSRSHILH*RVFLGCPPAPL Trigger: CAGTGGGGCTGGGGGACACCCTAGAAATACTCGTCAGTGCAGAATGTGACTGCGACTGCCAGAGAGAAATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | GGCACCAATGGCTTTACACTTGTCAGCACACTCTTCTaGGGCCTGGCCATCTGCAGACAGGTAGCACTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GTNGFTLVSTLF*GLAICRQVALD Trigger: ATCGAGTGCTACCTGTCTGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGACAAGTGTAAAGCCATTGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | CACTGCACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTTGGTaGTACAGTTACAGTATTCACCTGTCCAGCCATCCCGGCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: HCTALHPQMYTSPCW*YSYSIHLSSHPGTH Trigger: GTGTGTGCCGGGATGGCTGGACAGGTGAATACTGTAACTGTACAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGTGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | ACACTTGTCAGCACACTCTTCTTGGGCCTGGCCATCTaGAGACAGGTAGCACTCGATGCAACTCCGTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLVSTLFLGLAI*RQVALDATPFR Trigger: TCTAAACGGAGTTGCATCGAGTGCTACCTGTCTGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGACAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | TCTTCCTCACTGATGGTGGCACCAATGGCTTTACACTaGTCAGCACACTCTTCTTGGGCCTGGCCATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSLMVAPMALH*SAHSSWAWPSA Trigger: TGCAGATGGCCAGGCCCAAGAAGAGTGTGCTGACAAGTGTAAAGCCATTGGTGCCACCATCAGTGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | GAGCCAAAGCCCAGTCTAAAGTTGCTGGTTAGTTTGGACATCTCTTaGGCCAGCCGGGAGCCAAGCTCTTTGATGGTGTTGAGGTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EPKPSLKLLVSLDIS*ASREPSSLMVLRSS Trigger: TGACGACCTCAACACCATCAAAGAGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTTTAGACTGGGCTTTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | GGAGAAACGGGCTTTTCCACAAAAGAGCCAAAGCCCAGTCTAAAGTaGCTGGTTAGTTTGGACATCTCTTTGGCCAGCCGGGAGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GETGFSTKEPKPSLK*LVSLDISLASREPS Trigger: GCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTTTAGACTGGGCTTTGGCTCTTTTGTGGAAAAGCCCGTTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | CATCACTCACAAAAACCAGGAGGTGGAGCGAGTCATTaGGCCAGCCAATCTTTTCCTTACACACAGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HHSQKPGGGASH*ASQSFPYTQQP Trigger: AGGCTGCTGTGTGTAAGGAAAAGATTGGCTGGCGCAATGACTCGCTCCACCTCCTGGTTTTTGTGAGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | CATGAGGTAATACAGATCTACTGGGTAATCTTCAGTTaGGCGGACCTGCACTTGCAGAGTCTGCTCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HEVIQIYWVIFS*ADLHLQSLLTP Trigger: GGGCGTGAGCAGACTCTGCAAGTGCAGGTCCGCCAAACTGAAGATTACCCAGTAGATCTGTATTACCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | CCCAGTCTAAAGTTGCTGGTTAGTTTGGACATCTCTTaGGCCAGCCGGGAGCCAAGCTCTTTGATGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLKLLVSLDIS*ASREPSSLMVL Trigger: CAACACCATCAAAGAGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTTTAGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | AAAGAGCCAAAGCCCAGTCTAAAGTTGCTGGTTAGTTaGGACATCTCTTTGGCCAGCCGGGAGCCAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KEPKPSLKLLVS*DISLASREPSS Trigger: AGAGCTTGGCTCCCGGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTTTAGACTGGGCTTTGGCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | CTGTTCTTCTGTCGGCCCACGCTGAGAGGCTTATTTTaGAGGACTTCTATGCGGGAGACAGGGTTTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LFFCRPTLRGLF*RTSMRETGFSM Trigger: CATTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGAAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | ATCTACTGGGTAATCTTCAGTTTGGCGGACCTGCACTaGCAGAGTCTGCTCACGCCCTGGTCTCAATTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: IYWVIFSLADLH*QSLLTPWSQFK Trigger: CTTAAATTGAGACCAGGGCGTGAGCAGACTCTGCAAGTGCAGGTCCGCCAAACTGAAGATTACCCAGTAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | GGCTTTTCCACAAAAGAGCCAAAGCCCAGTCTAAAGTaGCTGGTTAGTTTGGACATCTCTTTGGCCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GFSTKEPKPSLK*LVSLDISLASR Trigger: CCGGCTGGCCAAAGAGATGTCCAAACTAACCAGCAACTTTAGACTGGGCTTTGGCTCTTTTGTGGAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | CACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTaGGTTGTACAGTTACAGTATTCACCTGTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HSTPSSDVHESL*VVQLQYSPVQP Trigger: TGGCTGGACAGGTGAATACTGTAACTGTACAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | TTCTTAAAAGTGCTGGTGGAACCTCGGTACAGAGGATaGGTTCCCGTTTGCCACTTGGCCTTAGAGCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLKVLVEPRYRG*VPVCHLALERS Trigger: AGAACGCTCTAAGGCCAAGTGGCAAACGGGAACCAATCCTCTGTACCGAGGTTCCACCAGCACTTTTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS TCA 72 bp | GAACAATGTCAGAACTGTTCTTCTGTCGGCCCACGCTaGGAGGCTTATTTTGAAGGACTTCTATGCGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EQCQNCSSVGPR*EAYFEGLLCGR Trigger: TCTCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGAAGAACAGTTCTGACATTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | GTTCCACCTCAGACCGCAGTTCTTCATAAGCGGAGATaGTCAGCTGAAGGATGTTCCCAGAATCCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPPQTAVLHKRR*SAEGCSQNPSE Trigger: TTCAGAAGGATTCTGGGAACATCCTTCAGCTGATCATCTCCGCTTATGAAGAACTGCGGTCTGAGGTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | TTGCGCCAGCCAATCTTTTCCTTACACACAGCAGCCTaGATGATTGCATCAAATCCACCTTCAGGTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRQPIFSLHTAA*MIASNPPSGVS Trigger: TGACACACCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAAGGAAAAGATTGGCTGGCGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | CAAGTGACAGAGTCCATCATTGGGAATGACAATGCCTaGCAGCTTGCTGTCCATTCCAAAATGAGAATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVTESIIGNDNA*QLAVHSKMRIG Trigger: GCCGATTCTCATTTTGGAATGGACAGCAAGCTGGCAGGCATTGTCATTCCCAATGATGGACTCTGTCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CCA 72 bp | ACAGCACTCCATCCTCAGATGTACACGAGTCCCTGTTaGTTGTACAGTTACAGTATTCACCTGTCCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TALHPQMYTSPC*LYSYSIHLSSH Trigger: ATGGCTGGACAGGTGAATACTGTAACTGTACAACCAACAGGGACTCGTGTACATCTGAGGATGGAGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | ACTGTTCTTCTGTCGGCCCACGCTGAGAGGCTTATTTaGAAGGACTTCTATGCGGGAGACAGGGTTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TVLLSAHAERLI*KDFYAGDRVFN Trigger: ATTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAAATAAGCCTCTCAGCGTGGGCCGACAGAAGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | GAACCTCGGTACAGAGGATTGGTTCCCGTTTGCCACTaGGCCTTAGAGCGTTCTGCTTCAAATTTAGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: EPRYRGLVPVCH*ALERSASNLAT Trigger: AGTTGCTAAATTTGAAGCAGAACGCTCTAAGGCCAAGTGGCAAACGGGAACCAATCCTCTGTACCGAGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 |
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| CDS CAA 72 bp | AGAGGATGGCTCCTGAGTCCACATACCGTTTGCCACTaGGCCTTAGAGCGTTCTGCTTCAAATTTAGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RGWLLSPHTVCH*ALERSASNLAT Trigger: AGTTGCTAAATTTGAAGCAGAACGCTCTAAGGCCAAGTGGCAAACGGTATGTGGACTCAGGAGCCATCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112517.8 |
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| CDS CAA 90 bp | GTAATACAGATCTACTGGGTAATCTTCAGTTTGGCGGACCTGCACTaGCAGAGTCTGCTCACGCCCTGGTCTCAATTTAAGAACCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VIQIYWVIFSLADLH*QSLLTPWSQFKNQA Trigger: AGCTTGGTTCTTAAATTGAGACCAGGGCGTGAGCAGACTCTGCAAGTGCAGGTCCGCCAAACTGAAGATTACCCAGTAGATCTGTATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | GTACACACCCCACACTGGAAGGAGCCATTCCCATTGTaGCACTTAGAGCTGTTAGTTTCTATTTCTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHTPHWKEPFPL*HLELLVSISLW Trigger: CCAGAGAGAAATAGAAACTAACAGCTCTAAGTGTCACAATGGGAATGGCTCCTTCCAGTGTGGGGTGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | CTGAAGCAGTCCCACGGTTGCTCCAGGAATGAGTTTTaGATAGTTCTCATACAGATGGACTTGTTCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LKQSHGCSRNEF*IVLIQMDLFLG Trigger: ACCCAAGAACAAGTCCATCTGTATGAGAACTATGCAAAACTCATTCCTGGAGCAACCGTGGGACTGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CCA 72 bp | GCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTTaGTGTGGGAAGAGGACACCATTGTTACAGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVSPTFMWEHFF*CGKRTPLLQRA Trigger: AGCTCTCTGTAACAATGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | ACAGTTGACATGGAATATTCATTCCTGTGGTCCAAGTaGCAGAGTCCATCATTGGGAATGACAATGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVDMEYSFLWSK*QSPSLGMTMPA Trigger: GGCAGGCATTGTCATTCCCAATGATGGACTCTGTCACTTGGACCACAGGAATGAATATTCCATGTCAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | TTCTTTTCTCACAGTTGGATACGCTCACAGTCACATTaGAGGATGCTGTGTCTCCAACTTTCATGTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFSHSWIRSQSH*RMLCLQLSCGS Trigger: GCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAATGTGACTGTGAGCGTATCCAACTGTGAGAAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 72 bp | CTTCTTTTCTCACAGTTGGATACGCTCACAGTCACATaGAAGGATGCTGTGTCTCCAACTTTCATGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLFSQLDTLTVT*KDAVSPTFMWE Trigger: CTCCCACATGAAAGTTGGAGACACAGCATCCTTCAATGTGACTGTGAGCGTATCCAACTGTGAGAAAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | ATTGAAGGATGCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTTaGGTGTGGGAAGAGGACACCATTGTTACAGAGAGCTGTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IEGCCVSNFHVGAFL*VWEEDTIVTESCER Trigger: TCTTTCACAGCTCTCTGTAACAATGGTGTCCTCTTCCCACACCAAAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS CAA 90 bp | AGGTTCCTGCTTCTTTTCTCACAGTTGGATACGCTCACAGTCACATaGAAGGATGCTGTGTCTCCAACTTTCATGTGGGAGCATTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RFLLLFSQLDTLTVT*KDAVSPTFMWEHFF Trigger: AAAGAAATGCTCCCACATGAAAGTTGGAGACACAGCATCCTTCAATGTGACTGTGAGCGTATCCAACTGTGAGAAAAGAAGCAGGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | AATCCTTCTGAAGCAGTCCCACGGTTGCTCCAGGAATaGGTTTTGCATAGTTCTCATACAGATGGACTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NPSEAVPRLLQE*VLHSSHTDGLV Trigger: AACAAGTCCATCTGTATGAGAACTATGCAAAACTCATTCCTGGAGCAACCGTGGGACTGCTTCAGAAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | AGGAGACAGAAGTATCCTTTGAAAAATCTTCCTCACTaGTGGTGGCACCAATGGCTTTACACTTGTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRQKYPLKNLPH*WWHQWLYTCQH Trigger: GTGCTGACAAGTGTAAAGCCATTGGTGCCACCATCAGTGAGGAAGATTTTTCAAAGGATACTTCTGTCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS GCA 72 bp | GCCAATCTTTTCCTTACACACAGCAGCCTGCATGATTaGATCAAATCCACCTTCAGGTGTGTCAATATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ANLFLTHSSLHD*IKSTFRCVNIS Trigger: GCTAATATTGACACACCTGAAGGTGGATTTGATGCAATCATGCAGGCTGCTGTGTGTAAGGAAAAGATTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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| CDS TCA 72 bp | TTTGAAGGACTTCTATGCGGGAGACAGGGTTTTCAATaGAGGGTAGTTGACATCCTTTGGCTAAAAGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: FEGLLCGRQGFQ*RVVDILWLKDS Trigger: CGAATCTTTTAGCCAAAGGATGTCAACTACCCTTCATTGAAAACCCTGTCTCCCGCATAGAAGTCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028348.9 ENSMUST00000059888.15 ENSMUST00000112517.8 ENSMUST00000154764.2 |
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