Pregenerated sensors for ITGB5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022817Ensembl transcript IDs: ENSMUST00000069345.6, ENSMUST00000115028.11, ENSMUST00000232262.2
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGCAGAGGGGAAGCTGAGAACACCAGAGTCTCCTTGCTTTCCCTaGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AAEGKLRTPESPCFP*LGGKWPQVPVARCV Trigger: CACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CCA 90 bp | GTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCCTTCAGAGGTTCATaGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGCTGAGAACACC | + |
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Preference number: 1 (lower is better) Translates to: VWPSREEGSQAFRGS*RQQAGGGRGEAENT Trigger: GGTGTTCTCAGCTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCCTCTTCCCTGCTGGGCCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR GCA 90 bp | CAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTaGCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: QSLLAFPGLEGSGPK*LWPAVWLPGPLGLN Trigger: ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CCA 90 bp | CTGAGAACACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTaGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LRTPESPCFPWLGGK*PQVPVARCVATRSL Trigger: AAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR TCA 90 bp | CAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGCTaGGAACACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: QRFMETASWRRQRGS*EHQSLLAFPGLEGS Trigger: ACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CCA 90 bp | CGCGCTAGCTTTGTACACACAGACTCTTCCGGATACCTTCTTGTCTaGCCCAGCAGGGAAGAGGGCAGCCAGGCCTTCAGAGGTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: RASFVHTDSSGYLLV*PSREEGSQAFRGSW Trigger: CCATGAACCTCTGAAGGCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTGTACAAAGCTAGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR GCA 90 bp | TGTACTTTCAACAGGCAACTCCCCAATTCTACCAACACCCACAGATaGCAGGCAGACAGCCCTCAGGGAACCAGTAATCAGATCTACACC | + |
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Preference number: 1 (lower is better) Translates to: CTFNRQLPNSTNTHR*QADSPQGTSNQIYT Trigger: GGTGTAGATCTGATTACTGGTTCCCTGAGGGCTGTCTGCCTGGCATCTGTGGGTGTTGGTAGAATTGGGGAGTTGCCTGTTGAAAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGTGGCTTGGAGGGAAGTaGCCCCAAGTGCCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: AARPSEVHGDSKLEAAEGWLGGK*PQVPVA Trigger: GGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR GCA 90 bp | CACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCGGAAGTGGCCCCAAGTaGCTGTGGCCCGCTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HTDSSGYLLVWPSREEGSGSGPK*LWPAVW Trigger: CCACACAGCGGGCCACAGGCACTTGGGGCCACTTCC...GCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGTGGCTTGGAGGGAAGTaGCCCCAAGTGCCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PESPCFPWLGGKWPQVPVWLGGK*PQVPVA Trigger: GGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGATGGAGACAGCAAGCTaGAGGCGGCAGAGGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ARPSEVHGDSKLEAAEGKMETAS*RRQRGS Trigger: GCTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCAT...CTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGGCAGAGGGGAAGCTGAGAACACCAGAGTCTCCTTGCTTTCCCTGGCTTGGTCTCCTTGCTTTCCCTaGCTTGGAGGGAAGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GGRGEAENTRVSLLSLAWSPCFP*LGGKWP Trigger: GGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGA...CCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CAA 90 bp | GGCTGCGCGCTAGCTTTGTACACACAGACTCTTCCGGATACCTTCTaGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCCTTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GCALALYTQTLPDTF*SGPAGKRAARPSEV Trigger: AACCTCTGAAGGCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTGTACAAAGCTAGCGCGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGACACCAGAGTCTCCTTaGTTTCCCTGGCTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PESPCFPWLGGKWPQVPVTPESP*FPWLGG Trigger: CCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGT...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCGCCTTCAGAGGTTCATaGAGACAGCAAGCTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGAFRGS*RQQAGG Trigger: GCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGC...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTAGGCCCCAAGTGCCTGTaGCCCGCTGTGTGGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: QNLTFARHVLSTGNSPILGPKCL*PAVWLP Trigger: TGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| 3UTR-3UTR GCA 90 bp | AAACAAACACAGACCGGAGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCAACACCAGAGTCTCCTTaGTTTCCCTGGCTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KQTQTGGQNLTFARHVLSTPESP*FPWLGG Trigger: CCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGT...TGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCTCCGGTCTGTGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| 3UTR-3UTR CCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTAGGATACCTTCTTGTCTaGCCCAGCAGGGAAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QNLTFARHVLSTGNSPILGYLLV*PSREEG Trigger: GCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCC...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| 3UTR CCA 72 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTaGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: FPGLEGSGPKCL*PAVWLPGPLGL Trigger: GAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CCA 72 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTaGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: EGSGPKCLWPAV*LPGPLGLNGGH Trigger: ATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGCTTGCTTTCCCTGGCTaGGAGGGAAGTGGCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: AARPSEVHGDSKLEAAEGLAFPG*EGSGPK Trigger: CTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAG...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTACTTGCTTTCCCTGGCTaGGAGGGAAGTGGCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLLAFPG*EGSGPK Trigger: CTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAG...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR CCA 72 bp | GGGAAGCTGAGAACACCAGAGTCTCCTTGCTTTCCCTaGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GKLRTPESPCFP*LGGKWPQVPVA Trigger: GGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR TCA 72 bp | ATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGCTaGGAACACCAGAGTCTCCTTGCTTTCCCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: METASWRRQRGS*EHQSLLAFPGL Trigger: CAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR GCA 72 bp | AACAGGCAACTCCCCAATTCTACCAACACCCACAGATaGCAGGCAGACAGCCCTCAGGGAACCAGTAATCAG | + |
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Preference number: 3 (lower is better) Translates to: NRQLPNSTNTHR*QADSPQGTSNQ Trigger: CTGATTACTGGTTCCCTGAGGGCTGTCTGCCTGGCATCTGTGGGTGTTGGTAGAATTGGGGAGTTGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| 3UTR CCA 72 bp | TCCATTATCCGTGCGTGCCTAGCTAGCGTGAGCAAATaGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SIIRACLASVSK*SRKSKARQSLH Trigger: ATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATTTGCTCACGCTAGCTAGGCACGCACGGATAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGCACTAAACAAACACAGACCGGAGGGCAAAACCTAACATTTGCAAGGCATGGCTGCGCGCTAGCTTaGTACACACAGACTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: KSTKQTQTGGQNLTFARHGCALA*YTQTLP Trigger: CGGAAGAGTCTGTGTGTACAAAGCTAGCGCGCAGCC...ATGCCTTGCAAATGTTAGGTTTTGCCCTCCGGTCTGTGTTTGTTTAGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGCGCTGCACAGAGGCTTaGCCTCTGCCTCCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: AARPSEVHGDSKLEAAEGRCTEA*PLPPGT Trigger: TGTGCCGGGAGGCAGAGGGCAAGCCTCTGTGCAGCG...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGCGCTGCACAGAGGCTTaGCCTCTGCCTCCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRRCTEA*PLPPGT Trigger: TGTGCCGGGAGGCAGAGGGCAAGCCTCTGTGCAGCG...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | GGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGCGCTGCACAGAGGCTTaGCCTCTGCCTCCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GSQAFRGSWRQQAGGGRGRCTEA*PLPPGT Trigger: TGTGCCGGGAGGCAGAGGGCAAGCCTCTGTGCAGCG...CCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGCATATGTTGAGCCCTaGGAGGCGCGGAACGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLAYVEP*EARNER Trigger: GCGCTCGTTCCGCGCCTCGCAGGGCTCAACATATGC...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGACTCTCCACGCCCGCTaGACAGAGGCTTGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRTLHAR*TEACPL Trigger: CAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGT...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACTCTCCACGCCCGCTaGACAGAGGCTTGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVATLHAR*TEACPL Trigger: CAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGT...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGTGGTTCTCCCCCTCCTaGCACTCGCACCTAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRWFSPS*HSHLVP Trigger: GGGCACTAGGTGCGAGTGCCAGGAGGGGGAGAACCA...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGCCACAGCCAGCAGGATaGTCATGGCATTGGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQPQPAG*SWHWGH Trigger: GTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGG...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTGGCTGATCCCACACTaGCAGCTCCACTTTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: WREVAPSACGPLCGYQVPWLIPH*QLHFSP Trigger: CGGGCTAAAGTGGAGCTGTCAGTGTGGGATCAGCCA...AGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR TCA 90 bp | CCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCATGGCTGATCCCACACTaGCAGCTCCACTTTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGLEGSGPKCLWPAVWLPWLIPH*QLHFSP Trigger: CGGGCTAAAGTGGAGCTGTCAGTGTGGGATCAGCCA...TGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | CTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCGCATATGTTGAGCCCTaGGAGGCGCGGAACGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LWPAVWLPGPLGLNGGHLAYVEP*EARNER Trigger: GCGCTCGTTCCGCGCCTCGCAGGGCTCAACATATGC...GAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGTGAGAGGCAGCAGATaGCGGAACCCGAAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRVRGSR*RNPKEG Trigger: CCCCTCCTTCGGGTTCCGGCATCTGCTGCCTCTCAC...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGGTGAAAGACTGTGCTaGTTGTCTGCCGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQGERLC*LSAGAA Trigger: AGCTGCCCCGGCAGACAAGCAGCACAGTCTTTCACC...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCAGAGGCTTGCCCTCTaGCTCCCGGCACAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PVARCVATRSLRAQWRASQRLAL*LPAQVL Trigger: CAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCTCTG...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGCAGAGGCTTGCCCTCTaGCTCCCGGCACAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRQRLAL*LPAQVL Trigger: CAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCTCTG...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | GGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTAGCAGGAGCACTGGTTaGAGCTACACTCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEGSGPKCLWPAVWLPGSRSTG*SYTLHA Trigger: GGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCT...ACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACAGCAGGAGCACTGGTTaGAGCTACACTCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLAWREVAPSACGPLCGYSRSTG*SYTLHA Trigger: GGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCT...GTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTAGGCTCCAGGCTCTGTaGACTGGCACTGCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPGLEGSGPKCLWPARLQAL*TGTAHR Trigger: TCTGTGGGCAGTGCCAGTGCACAGAGCCTGGAGCCT...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGCATTCCCACTGCATCTaGCACTGTTGGGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRHSHCI*HCWAPA Trigger: GGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATG...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCATTCCCACTGCATCTaGCACTGTTGGGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLAWREVAPSACGPLCGYHSHCI*HCWAPA Trigger: GGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATG...GTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGTGGTTCTCCCCCTCCTaGCACTCGCACCTAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARPSEVHGDSKLEAAEGKWFSPS*HSHLVP Trigger: GGGCACTAGGTGCGAGTGCCAGGAGGGGGAGAACCA...CTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGCCAGGCTCTGTGCACTaGCACTGCCCACAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRPGSVH*HCPQTQ Trigger: TTGTGTCTGTGGGCAGTGCCAGTGCACAGAGCCTGG...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGTGGTGGTGGCAGGTCTaGTTGTCAGGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQWWWQV*LSGFPW Trigger: CCAGGGGAAACCTGACAACCAGACCTGCCACCACCA...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTGGTGGTGGCAGGTCTaGTTGTCAGGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WREVAPSACGPLCGYQVPWWWQV*LSGFPW Trigger: CCAGGGGAAACCTGACAACCAGACCTGCCACCACCA...AGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGCCAGCAGGATGGTCATaGCATTGGGGGCACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQPAGWS*HWGHFH Trigger: GTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGG...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTGGTCACACCGAGAGGTaGTGGACCGTGGATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVAGHTER*WTVDCQ Trigger: TTGGCAATCCACGGTCCATCACCTCTCGGTGTGACC...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGGGTCACACCGAGAGGTaGTGGACCGTGGATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AARPSEVHGDSKLEAAEGGHTER*WTVDCQ Trigger: TTGGCAATCCACGGTCCATCACCTCTCGGTGTGACC...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATTGGAACCCTTGCTGCTaGGAGGTAGGTTCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPKCLWPAVWLPGPLGLNWNPCC*EVGSGG Trigger: TCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTCCA...ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGTGTCGACTCTGTCTGTaGGAGGCAGCAGATGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AARPSEVHGDSKLEAAEGCRLCL*EAADAG Trigger: TCCGGCATCTGCTGCCTCTCACAGACAGAGTCGACA...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS-3UTR TCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTTTGGCTTCATTCAGGTaGCACTGGCCATCGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVALASFR*HWPSWG Trigger: GCCCCACGATGGCCAGTGTCACCTGAATGAAGCCAA...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR TCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTATGGCTGATCCCACACTaGCAGCTCCACTTTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLWLIPH*QLHFSP Trigger: CGGGCTAAAGTGGAGCTGTCAGTGTGGGATCAGCCA...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | TTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTTCCACCTGGCGCACCTaGAGCTGGAACGTAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSLAWREVAPSACGPLCSTWRT*SWNVVC Trigger: GCAGACTACGTTCCAGCTGCAGGTGCGCCAGGTGGA...ACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGCCTCCGCAAGCTTGGTaGCCAGGCTCCGGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRPPQAW*PGSGCS Trigger: AGAACATCCGGAGCCTGGGCACCAAGCTTGCGGAGG...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTAAGCAGGAGCACTGGTTaGAGCTACACTCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPGLEGSGPKCLWPAVWLSRSTG*SYTLHA Trigger: GGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCT...TAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTAGGCTCCAGGCTCTGTaGACTGGCACTGCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVARCVATRSLRAQWRASRLQAL*TGTAHR Trigger: TCTGTGGGCAGTGCCAGTGCACAGAGCCTGGAGCCT...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGCCAGATGGCCAGGAGTaGCATCCCAATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQPDGQE*HPNQED Trigger: ATCCTCCTGATTGGGATGGCACTCCTGGCCATCTGG...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR GCA 90 bp | GGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCAGATGGCCAGGAGTaGCATCCCAATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLEGSGPKCLWPAVWLPGPDGQE*HPNQED Trigger: ATCCTCCTGATTGGGATGGCACTCCTGGCCATCTGG...ACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGTCCCGGCACAGGTTCTaGTACCCGCTCTGGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRSRHRF*YPLWFS Trigger: GGAGAACCAGAGCGGGTACCAGAACCTGTGCCGGGA...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTCCAGGCTCTGTGCACTaGCACTGCCCACAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVAPGSVH*HCPQTQ Trigger: TTGTGTCTGTGGGCAGTGCCAGTGCACAGAGCCTGG...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGCCACAGCCAGCAGGATaGTCATGGCATTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRPQPAG*SWHWGH Trigger: GTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGG...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTACGAGCAGCTTCCAGATaGCCAGGAGTGCCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLRAASR*PGVPSQ Trigger: TTGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCG...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTCGAGCAGCTTCCAGATaGCCAGGAGTGCCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVARAASR*PGVPSQ Trigger: TTGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCG...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGGCACATCGTCTGTTGTaGACACCAGCAAGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRAHRLL*TPASAE Trigger: CTCTGCACTTGCTGGTGTTCACAACAGACGATGTGC...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCTCCTGGTCATCTTTaGCGATGGTGTCTACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FPGLEGSGPKCLWPAVWLPPGHL*RWCLPT Trigger: CGTGGGTAGACACCATCGTCAAAGATGACCAGGAGG...TAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGACCAGGGTAAGATATaGCATCTTGGCAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQDQGKI*HLGRWQ Trigger: CTGCCACCTGCCAAGATGGCATATCTTACCCTGGTC...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTGGTGAAAGACTGTGCTaGTTGTCTGCCGGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVARCVATRSLRAQWRASGERLC*LSAGAA Trigger: AGCTGCCCCGGCAGACAAGCAGCACAGTCTTTCACC...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTACAAGGTGAAAGACTGTaGTGCTTGTCTGCCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLQGERL*CLSAGA Trigger: TGCCCCGGCAGACAAGCAGCACAGTCTTTCACCTTG...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATCAAGGTGAAAGACTGTaGTGCTTGTCTGCCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPKCLWPAVWLPGPLGLNQGERL*CLSAGA Trigger: TGCCCCGGCAGACAAGCAGCACAGTCTTTCACCTTG...ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGAGGCTTGCCCTCTaGCTCCCGGCACAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTDSSGYLLVWPSREEGSQRLAL*LPAQVL Trigger: CAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCTCTG...GCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTCAATCAGGAGGATGCTaGCAACCACAGCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAQSGGC*QPQPAG Trigger: TCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTG...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTACAATCAGGAGGATGCTaGCAACCACAGCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLQSGGC*QPQPAG Trigger: TCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTG...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGCCAGATGGCCAGGAGTaGCATCCCAATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AARPSEVHGDSKLEAAEGPDGQE*HPNQED Trigger: ATCCTCCTGATTGGGATGGCACTCCTGGCCATCTGG...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCATCGTGGGGCTaGACCAGGCCACCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HQSLLAFPGLEGSGPKCLWPSWG*TRPPSF Trigger: AAAACTGGGTGGCCTGGTCCAGCCCCACGATGGCCA...CAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | GGCGGCAGAGGGGAAGCTGAGAACACCAGAGTCTCCTTGCTTTCCCTGGCTTGGTGGCCATCGTGGGGCTaGACCAGGCCACCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGEAENTRVSLLSLAWWPSWG*TRPPSF Trigger: AAAACTGGGTGGCCTGGTCCAGCCCCACGATGGCCA...CCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATTCCCACTGCATCTaGCACTGTTGGGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCLWPAVWLPGPLGLNGGHSHCI*HCWAPA Trigger: GGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATG...CCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCTCCCGGCACAGGTTCTaGTACCCGCTCTGGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGSRHRF*YPLWFS Trigger: GGAGAACCAGAGCGGGTACCAGAACCTGTGCCGGGA...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCGAAGCAGGAGCACTaGTTGCAGCTACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRSKQEH*LQLHSP Trigger: TGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGA...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGTGGTGGTGGCAGGTCTaGTTGTCAGGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAARPSEVHGDSKLEAAEWWWQV*LSGFPW Trigger: CCAGGGGAAACCTGACAACCAGACCTGCCACCACCA...CTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTGGATGGTCATGGCATTaGGGGCACTTCCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WREVAPSACGPLCGYQVPGWSWH*GHFHIL Trigger: CAGAATGTGGAAGTGCCCCCAATGCCATGACCATCC...AGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| 3UTR CAA 72 bp | GGCGGCAGAGGGGAAGCTGAGAACACCAGAGTCTCCTaGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGEAENTRVS*LSLAWREVAPS Trigger: ACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTGTTCTCAGCTTCCCCTCTGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGCACATCGTCTGTTGTaGACACCAGCAAGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAAHRLL*TPASAE Trigger: CTCTGCACTTGCTGGTGTTCACAACAGACGATGTGC...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTGCACCAGGCACATTTTaGGTGGATCAACAGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLEGSGPKCLWPAVWLPGAPGTF*VDQQAF Trigger: GAATGCCTGTTGATCCACCCAAAATGTGCCTGGTGC...ACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCACCAAGTCATCCTTCATaGAGAGGGAGAGGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLEGSGPKCLWPAVWLPPSHPS*RGRGPS Trigger: TGATGGACCTCTCCCTCTCCATGAAGGATGACTTGG...TGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTGCAAAATCTCCACAGTaGTTCCAGGTATCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WREVAPSACGPLCGYQVPAKSPQ*FQVSGL Trigger: CAGCCCTGATACCTGGAACCACTGTGGAGATTTTGC...AGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGGCAAAATCTCCACAGTaGTTCCAGGTATCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRAKSPQ*FQVSGL Trigger: CAGCCCTGATACCTGGAACCACTGTGGAGATTTTGC...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCTCCCGGCACAGGTTCTaGTACCCGCTCTGGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQTLPDTFLSGPAGKRAASRHRF*YPLWFS Trigger: GGAGAACCAGAGCGGGTACCAGAACCTGTGCCGGGA...GGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATTCGAAGCAGGAGCACTaGTTGCAGCTACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPKCLWPAVWLPGPLGLNSKQEH*LQLHSP Trigger: TGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGA...ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGCCAGGCTCTGTGCACTaGCACTGCCCACAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: PESPCFPWLGGKWPQVPVPGSVH*HCPQTQ Trigger: TTGTGTCTGTGGGCAGTGCCAGTGCACAGAGCCTGG...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGTCTTTGCACTGGTGGTaGCAGGTCTGGTTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AARPSEVHGDSKLEAAEGSLHWW*QVWLSG Trigger: ACCTGACAACCAGACCTGCCACCACCAGTGCAAAGA...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTTCTTTGCACTGGTGGTaGCAGGTCTGGTTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPGLEGSGPKCLWPASLHWW*QVWLSG Trigger: ACCTGACAACCAGACCTGCCACCACCAGTGCAAAGA...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTGGATGGTCATGGCATTaGGGGCACTTCCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVAGWSWH*GHFHIL Trigger: CAGAATGTGGAAGTGCCCCCAATGCCATGACCATCC...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTATCAGGTTTCCCCTGGTaGAGTAGCAAGCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLSGFPW*SSKHST Trigger: TGTCGAATGCTTGCTACTTCACCAGGGGAAACCTGA...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGCCTCCTGGTCATCTTTaGCGATGGTGTCTACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HQSLLAFPGLEGSGPKCLPPGHL*RWCLPT Trigger: CGTGGGTAGACACCATCGTCAAAGATGACCAGGAGG...CAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTTCTGTACAGGGGGTTTaGGGCTTTGGAACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPWLGGKWPQVPVARCVASVQGV*GFGTWQ Trigger: TTGCCAAGTTCCAAAGCCTCAAACCCCCTGTACAGA...AGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGGAGCCTCAGTCCACTaGGCCATTGTAGGATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAGASVH*AIVGFV Trigger: AACAAATCCTACAATGGCTCAGTGGACTGAGGCTCC...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTGGTCTGGTATCTCGGTaGCGTGTAGGAGAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVARCVATRSLRAQWRASGLVSR*RVGERR Trigger: TCTCCTTTCTCCTACACGGCACCGAGATACCAGACC...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGTGAGAGGCAGCAGATaGCGGAACCCGAAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGPGSPRHARVFILSPPPVRGSR*RNPKEG Trigger: CCCCTCCTTCGGGTTCCGGCATCTGCTGCCTCTCAC...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGTCCCCAATGTAACCTaGGTGGCATTTGCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRVPNVT*VAFAFS Trigger: GGAGAATGCAAATGCCACGCAGGTTACATTGGGGAC...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGAGGCTCCAGGCTCTGTaGACTGGCACTGCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MVQEVQGTPESSSLVPLQRLQAL*TGTAHR Trigger: TCTGTGGGCAGTGCCAGTGCACAGAGCCTGGAGCCT...CTGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGAGGAGGGGACGCAGTTaGGGAATAACTTGTAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLGGKWPQVPVARCVATRRRGRS*GITCNQ Trigger: TTGGTTACAAGTTATTCCCCAACTGCGTCCCCTCCT...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGCAAAATCTCCACAGTaGTTCCAGGTATCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPKCLWPAVWLPGPLGLNAKSPQ*FQVSGL Trigger: CAGCCCTGATACCTGGAACCACTGTGGAGATTTTGC...ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGTCTTTGCACTGGTGGTaGCAGGTCTGGTTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAARPSEVHGDSKLEAAESLHWW*QVWLSG Trigger: ACCTGACAACCAGACCTGCCACCACCAGTGCAAAGA...CTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGATGGTCATGGCATTaGGGGCACTTCCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSLAWREVAPSACGPLCGWSWH*GHFHIL Trigger: CAGAATGTGGAAGTGCCCCCAATGCCATGACCATCC...ACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | CACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCCAGCAGGATGGTCATaGCATTGGGGGCACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTDSSGYLLVWPSREEGSPAGWS*HWGHFH Trigger: GTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGG...GCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTGGGGGTTTGAGGCTTTaGAACTTGGCAAACTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVARCVATRSLRAQWRASGGLRL*NLANSR Trigger: CCGAGAGTTTGCCAAGTTCCAAAGCCTCAAACCCCC...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGTGGAACCCTTGCTGCTaGGAGGTAGGTTCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVQEVQGTPESSSLVPLQWNPCC*EVGSGG Trigger: TCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTCCA...CTGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCGGTCTGGTATCTCGGTaGCGTGTAGGAGAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGGLVSR*RVGERR Trigger: TCTCCTTTCTCCTACACGGCACCGAGATACCAGACC...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | CACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCTTCCGGGACACCCTCTaGTTCCTCACTTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTDSSGYLLVWPSREEGSFRDTL*FLTSSL Trigger: CAACGAGGAAGTGAGGAAGCAGAGGGTGTCCCGGAA...GCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTAGTGAACACCAGCAAGTaGAGAGCATCTTTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGLEGSGPKCLWPAVWLVNTSK*RASFRH Trigger: ATGGCGAAAAGATGCTCTGCACTTGCTGGTGTTCAC...TAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGTGAACACCAGCAAGTaGAGAGCATCTTTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRVNTSK*RASFRH Trigger: ATGGCGAAAAGATGCTCTGCACTTGCTGGTGTTCAC...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTGTTGATATTGTTCTCTaGCAGCTTCTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLEGSGPKCLWPAVWLPGVDIVL*QLLPKQ Trigger: TTGCTTGGGGAGAAGCTGGCAGAGAACAATATCAAC...ACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCGACCAGGGTAAGATATaGCATCTTGGCAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGDQGKI*HLGRWQ Trigger: CTGCCACCTGCCAAGATGGCATATCTTACCCTGGTC...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGATGTTCCATTCCCACTaGATCTGGCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAARPSEVHGDSKLEAAEMFHSH*IWHCWA Trigger: AGCCCAACAGTGCCAGATGCAGTGGGAATGGAACAT...CTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGTCCCCAATGTAACCTaGGTGGCATTTGCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRVPNVT*VAFAFS Trigger: GGAGAATGCAAATGCCACGCAGGTTACATTGGGGAC...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCACAGGCACATTTTGGGTaGATCAACAGGCATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLEGSGPKCLWPAVWLPQAHFG*INRHSS Trigger: TGAAGAATGCCTGTTGATCCACCCAAAATGTGCCTG...TGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGCCAAGTCATCCTTCATaGAGAGGGAGAGGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPVARCVATRSLRAQWRPSHPS*RGRGPS Trigger: TGATGGACCTCTCCCTCTCCATGAAGGATGACTTGG...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGAAGCAAGGCAAGCGATaGATAGTCCATCTGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAWREVAPSACGPLCGYQKQGKR*IVHLVR Trigger: TCTAACCAGATGGACTATCCATCGCTTGCCTTGCTT...CTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCCAAAGCACAGCCTCCTaGTCATCTTTGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPAVWLPGPLGLNGGHLQSTAS*SSLTMV Trigger: CACCATCGTCAAAGATGACCAGGAGGCTGTGCTTTG...GAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCCATTATCGAGCAGCTTCCAGATaGCCAGGAGTGCCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAVWLPGPLGLNGGHLHYRAASR*PGVPSQ Trigger: TTGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCG...ATAATGGAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTCAGGTTTCCCCTGGTaGAGTAGCAAGCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: HQSLLAFPGLEGSGPKCLSGFPW*SSKHST Trigger: TGTCGAATGCTTGCTACTTCACCAGGGGAAACCTGA...CAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | CCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCCATTATCCTCCTGGTCATCTTTaGCGATGGTGTCTACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PAVWLPGPLGLNGGHLHYPPGHL*RWCLPT Trigger: CGTGGGTAGACACCATCGTCAAAGATGACCAGGAGG...ATAATGGAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCATGTTCCATTCCCACTaGATCTGGCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGMFHSH*IWHCWA Trigger: AGCCCAACAGTGCCAGATGCAGTGGGAATGGAACAT...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCACCAGGCACATTTTaGGTGGATCAACAGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PESPCFPWLGGKWPQVPVAPGTF*VDQQAF Trigger: GAATGCCTGTTGATCCACCCAAAATGTGCCTGGTGC...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGTGCCAAAGTACTCTTTaGAGCACCAGGCACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQPGLQRFMETASWRRQRCQSTL*STRHIL Trigger: CAAAATGTGCCTGGTGCTCCAAAGAGTACTTTGGCA...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGCAAAGCACAGCCTCCTaGTCATCTTTGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PESPCFPWLGGKWPQVPVQSTAS*SSLTMV Trigger: CACCATCGTCAAAGATGACCAGGAGGCTGTGCTTTG...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATAATCGACAGTGTGTGTaGAGATGGGCTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GPKCLWPAVWLPGPLGLNNRQCV*RWAFCT Trigger: TGTACAGAAAGCCCATCTCCACACACACTGTCGATT...ATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAAATCGACAGTGTGTGTaGAGATGGGCTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLNRQCV*RWAFCT Trigger: TGTACAGAAAGCCCATCTCCACACACACTGTCGATT...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| 3UTR CAA 72 bp | CTAGCTTTGTACACACAGACTCTTCCGGATACCTTCTaGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALYTQTLPDTF*SGPAGKRAARP Trigger: AGGCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTGTACAAAGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCATTCCGGGACACCCTCTaGTTCCTCACTTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGPGSPRHARVFILSPPPFRDTL*FLTSSL Trigger: CAACGAGGAAGTGAGGAAGCAGAGGGTGTCCCGGAA...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCGTTGATATTGTTCTCTaGCAGCTTCTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWPAVWLPGPLGLNGGHLVDIVL*QLLPKQ Trigger: TTGCTTGGGGAGAAGCTGGCAGAGAACAATATCAAC...GAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGGTTGATATTGTTCTCTaGCAGCTTCTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARPSEVHGDSKLEAAEGKVDIVL*QLLPKQ Trigger: TTGCTTGGGGAGAAGCTGGCAGAGAACAATATCAAC...CTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCACAAGGTGAAAGACTGTaGTGCTTGTCTGCCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGPGSPRHARVFILSPPPQGERL*CLSAGA Trigger: TGCCCCGGCAGACAAGCAGCACAGTCTTTCACCTTG...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | CACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAAAGCACAGCCTCCTaGTCATCTTTGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTDSSGYLLVWPSREEGSQSTAS*SSLTMV Trigger: CACCATCGTCAAAGATGACCAGGAGGCTGTGCTTTG...GCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGTCAGGTTTCCCCTGGTaGAGTAGCAAGCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: MVQEVQGTPESSSLVPLQSGFPW*SSKHST Trigger: TGTCGAATGCTTGCTACTTCACCAGGGGAAACCTGA...CTGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGATGTTCCATTCCCACTaGATCTGGCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MVQEVQGTPESSSLVPLQMFHSH*IWHCWA Trigger: AGCCCAACAGTGCCAGATGCAGTGGGAATGGAACAT...CTGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAATCGACAGTGTGTGTaGAGATGGGCTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TQTLPDTFLSGPAGKRAANRQCV*RWAFCT Trigger: TGTACAGAAAGCCCATCTCCACACACACTGTCGATT...GGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTACTCTCCACGCCCGCTaGACAGAGGCTTGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKPNICKACTFNRQLPNSTLHAR*TEACPL Trigger: CAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGT...AGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAAAGCAAGGCAAGCGATaGATAGTCCATCTGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGPGSPRHARVFILSPPPKQGKR*IVHLVR Trigger: TCTAACCAGATGGACTATCCATCGCTTGCCTTGCTT...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR CCA 90 bp | CGGAGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCTCGAAGCAGGAGCACTaGTTGCAGCTACACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRAKPNICKACTFNRQLPSKQEH*LQLHSP Trigger: TGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGA...GGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR CCA 90 bp | GCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTCCACAGCCAGCAGGATaGTCATGGCATTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKPNICKACTFNRQLPNSPQPAG*SWHWGH Trigger: GTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGG...AGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTATCCACCTGGCGCACCTaGAGCTGGAACGTAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNLTFARHVLSTGNSPILSTWRT*SWNVVC Trigger: GCAGACTACGTTCCAGCTGCAGGTGCGCCAGGTGGA...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTAGGTGAAAGACTGTGCTaGTTGTCTGCCGGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNLTFARHVLSTGNSPILGERLC*LSAGAA Trigger: AGCTGCCCCGGCAGACAAGCAGCACAGTCTTTCACC...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | AAACAAACACAGACCGGAGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCAGACCAGGGTAAGATATaGCATCTTGGCAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQTQTGGQNLTFARHVLSDQGKI*HLGRWQ Trigger: CTGCCACCTGCCAAGATGGCATATCTTACCCTGGTC...TGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCTCCGGTCTGTGTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | AGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATGTCCCCAATGTAACCTaGGTGGCATTTGCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAKPNICKACTFNRQLPNVPNVT*VAFAFS Trigger: GGAGAATGCAAATGCCACGCAGGTTACATTGGGGAC...ATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR GCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTACAATCAGGAGGATGCTaGCAACCACAGCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLTFARHVLSTGNSPILQSGGC*QPQPAG Trigger: TCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTG...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR CCA 90 bp | GCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTAGGAGGGGACGCAGTTaGGGAATAACTTGTAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKPNICKACTFNRQLPNSRRGRS*GITCNQ Trigger: TTGGTTACAAGTTATTCCCCAACTGCGTCCCCTCCT...AGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR CCA 90 bp | CAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATTCTACAGGCACATTTTGGGTaGATCAACAGGCATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNLTFARHVLSTGNSPILQAHFG*INRHSS Trigger: TGAAGAATGCCTGTTGATCCACCCAAAATGTGCCTG...TAGAATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
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| CDS-3UTR CAA 90 bp | CCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCACCACTAGTGCATATGTaGAGCCCTGCGAGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGLEGSGPKCLWPAVWLPPLVHM*SPARRG Trigger: TCCGCGCCTCGCAGGGCTCAACATATGCACTAGTGG...TGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS-3UTR CAA 90 bp | TCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCGGAGGACCGTCAAGTaGGACCTCCCATTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLAWREVAPSACGPLCGYRRTVK*DLPLGS Trigger: ACTGCCCAATGGGAGGTCCAACTTGACGGTCCTCCG...GTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS GCA 90 bp | AGCACTGGTTGCAGCTACACTCTCCACGCCCGCTGCACAGAGGCTTaGCCTCTGCCTCCCGGCACAGGTTCTGGTACCCGCTCTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: STGCSYTLHARCTEA*PLPPGTGSGTRSGS Trigger: AGAACCAGAGCGGGTACCAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGTGTAGCTGCAACCAGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS GCA 90 bp | TCTCGAAGCAGGAGCACTGGTTGCAGCTACACTCTCCACGCCCGCTaGACAGAGGCTTGCCCTCTGCCTCCCGGCACAGGTTCTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SRSRSTGCSYTLHAR*TEACPLPPGTGSGT Trigger: GGTACCAGAACCTGTGCCGGGAGGCAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CCA 90 bp | TGCTCGCCTGGCCGGAGGCTCACTGCAATCTCCTGCGGCGTCATCTaGATGACGTCAGAGCCCGTGGCACTGGAACCCTTGCTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSPGRRLTAISCGVI*MTSEPVALEPLLLR Trigger: TCTCAGCAGCAAGGGTTCCAGTGCCACGGGCTCTGACGTCATCCAGATGACGCCGCAGGAGATTGCAGTGAGCCTCCGGCCAGGCGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGATTTCCTCCGCAAGCTaGGTGCCCAGGCTCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSQAFRGSWRQQAGGGRGISSAS*VPRLRM Trigger: CATCCGGAGCCTGGGCACCAAGCTTGCGGAGGAAAT...CCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCTGCATCTGGCACTGTaGGGCTCCAGCCCCGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KCLWPAVWLPGPLGLNGGLHLAL*GSSPVL Trigger: TAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAG...CCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGCTGCATCTGGCACTGTaGGGCTCCAGCCCCGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RAARPSEVHGDSKLEAAELHLAL*GSSPVL Trigger: TAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAG...CTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCTGCATCTGGCACTGTaGGGCTCCAGCCCCGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PVARCVATRSLRAQWRASLHLAL*GSSPVL Trigger: TAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAG...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAATTTCCTCCGCAAGCTaGGTGCCCAGGCTCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QPGLQRFMETASWRRQRGISSAS*VPRLRM Trigger: CATCCGGAGCCTGGGCACCAAGCTTGCGGAGGAAAT...TCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTCATCCGATCTTCTCCTaGCAGACAGCAGCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAHPIFS*QTAAWR Trigger: CCTCCAGGCTGCTGTCTGCAAGGAGAAGATCGGATG...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTAAGCAGGAGCACTGGTaGCAGCTACACTCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAKQEHW*QLHSPR Trigger: GCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTT...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTAAAGCAGGAGCACTGGTaGCAGCTACACTCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: FPGLEGSGPKCLWPAVWLKQEHW*QLHSPR Trigger: GCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTT...TAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGCAGGAGCACTGGTaGCAGCTACACTCTCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: AARPSEVHGDSKLEAAEGKQEHW*QLHSPR Trigger: GCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTT...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTCGGAGGACCGTCAAGTaGGACCTCCCATTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLAWREVAPSACGPLCRRTVK*DLPLGS Trigger: ACTGCCCAATGGGAGGTCCAACTTGACGGTCCTCCG...ACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | TGCATCTGGCACTGTTGGGCTCCAGCCCCGTGCTACAGCCGCATGTaGAATTGTAGGCGACTTCCACCTGCAGACTGTCCCGGAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CIWHCWAPAPCYSRM*NCRRLPPADCPGSP Trigger: TGGGCTTCCGGGACAGTCTGCAGGTGGAAGTCGCCTACAATTGCACATGCGGCTGTAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | GTCCGTAGATCCTCCCGAACTCACTCTCGAAGCAGGAGCACTGGTTaGAGCTACACTCTCCACGCCCGCTGCACAGAGGCTTGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRRSSRTHSRSRSTG*SYTLHARCTEACPL Trigger: CAGAGGGCAAGCCTCTGTGCAGCGGGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGAGAGTGAGTTCGGGAGGATCTACGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | TTCTCACACGTCTCCCCAAAGGCTCCAGGCTCTGTGCACTGGCACTaGCCACAGACACAACGGCCTCGGTCACTGCAGATCTGCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FSHVSPKAPGSVHWH*PQTQRPRSLQICPS Trigger: GGATGGGCAGATCTGCAGTGACCGAGGCCGTTGTGTCTGTGGGCAGTGCCAGTGCACAGAGCCTGGAGCCTTTGGGGAGACGTGTGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | CGAGCAGCTTCCAGATGGCCAGGAGTGCCATCCCAATCAGGAGGATaGTGCCAACCACAGCCAGCAGGATGGTCATGGCATTGGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAASRWPGVPSQSGG*CQPQPAGWSWHWGH Trigger: GTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 90 bp | GCCCTGGAGCGCTCACTTTGGAACTTGGCAAACTCTCGGCGGTCGTaGATGGTGACGAGCAGCTTCCAGATGGCCAGGAGTGCCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALERSLWNLANSRRS*MVTSSFQMARSAIP Trigger: TGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCGTCACCATCCACGACCGCCGAGAGTTTGCCAAGTTCCAAAGTGAGCGCTCCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGCCACTAGTGCATATGTaGAGCCCTGCGAGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQSLLAFPGLEGSGPKCLPLVHM*SPARRG Trigger: TCCGCGCCTCGCAGGGCTCAACATATGCACTAGTGG...CAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTGTGGCACTGGAACCCTaGCTGCTGAGAGGTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVARCVATRSLRAQWRASVALEP*LLRGRF Trigger: GAACCTACCTCTCAGCAGCAAGGGTTCCAGTGCCAC...AGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGTGGCACTGGAACCCTaGCTGCTGAGAGGTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLAWREVAPSACGPLCVALEP*LLRGRF Trigger: GAACCTACCTCTCAGCAGCAAGGGTTCCAGTGCCAC...ACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGAGGATGGTCATGGCATaGGGGGCACTTCCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLGGKWPQVPVARCVATRRMVMA*GALPHS Trigger: AGAATGTGGAAGTGCCCCCAATGCCATGACCATCCT...CCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | TTGTCTGCCGGGGCAGCTCCGAGCCTCCACGGACACTTCAAAGGATaGCGTGTCCCCAATCTTCAGACCCTCACACTTCCTCTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAGAAPSLHGHFKG*RVPNLQTLTLPLTR Trigger: CCTGGTCAGAGGAAGTGTGAGGGTCTGAAGATTGGGGACACGGCATCCTTTGAAGTGTCCGTGGAGGCTCGGAGCTGCCCCGGCAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 90 bp | TCAGGAGGATGCTGCCAACCACAGCCAGCAGGATGGTCATGGCATTaGGGGCACTTCCACATTCTGGCTCCCGGAGGACCGTCAAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGCCQPQPAGWSWH*GHFHILAPGGPSSW Trigger: CCAACTTGACGGTCCTCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 90 bp | TCCCAATCAGGAGGATGCTGCCAACCACAGCCAGCAGGATGGTCATaGCATTGGGGGCACTTCCACATTCTGGCTCCCGGAGGACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSGGCCQPQPAGWS*HWGHFHILAPGGPS Trigger: TGACGGTCCTCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 90 bp | GTGCCATCCCAATCAGGAGGATGCTGCCAACCACAGCCAGCAGGATaGTCATGGCATTGGGGGCACTTCCACATTCTGGCTCCCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPSQSGGCCQPQPAG*SWHWGHFHILAPGG Trigger: TCCTCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTGGGATGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCTTCCGGATACCTTCTTGTCTGGCCCAGCAGGGAAGAGGGCAGCCAGGCCATCCGATCTTCTCCTaGCAGACAGCAGCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLFRIPSCLAQQGRGQPGHPIFS*QTAAWR Trigger: CCTCCAGGCTGCTGTCTGCAAGGAGAAGATCGGATG...GCCTGGCTGCCCTCTTCCCTGCTGGGCCAGACAAGAAGGTATCCGGAAGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGAGCATAGGACGCCCTaGTTTCTGGCACAGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAEHRTP*FLAQEK Trigger: CTTTTCCTGTGCCAGAAACAAGGGCGTCCTATGCTC...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGAGGATGGTCATGGCATaGGGGGCACTTCCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQPGLQRFMETASWRRQRRMVMA*GALPHS Trigger: AGAATGTGGAAGTGCCCCCAATGCCATGACCATCCT...CCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 90 bp | CACTGGCACTGCCCACAGACACAACGGCCTCGGTCACTGCAGATCTaGCCATCCTTGGCCCTGCATGTGCTGACGTCTGTTGAGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: HWHCPQTQRPRSLQI*PSLALHVLTSVEQL Trigger: TAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTGACCGAGGCCGTTGTGTCTGTGGGCAGTGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CCA 90 bp | GTGGCACTGGAACCCTTGCTGCTGAGAGGTAGGTTCCGGAGGACGTaGGTGCTGCTGGCTGGACTCTCAATCTCACCTTCACAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VALEPLLLRGRFRRT*VLLAGLSISPSQPF Trigger: GAATGGCTGTGAAGGTGAGATTGAGAGTCCAGCCAGCAGCACCCACGTCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTCCAGTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 90 bp | ACAGGGGGTTTGAGGCTTTGGAACTTGGCAAACTCTCGGCGGTCGTaGATGGTGACGAGCAGCTTCCAGATGGCCAGGAGTGCCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGGLRLWNLANSRRS*MVTSSFQMARSAIP Trigger: TGGGATGGCACTCCTGGCCATCTGGAAGCTGCTCGTCACCATCCACGACCGCCGAGAGTTTGCCAAGTTCCAAAGCCTCAAACCCCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTAAGCACCAGGCACATTTaGGGTGGATCAACAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FPGLEGSGPKCLWPAVWLSTRHI*GGSTGI Trigger: AATGCCTGTTGATCCACCCAAAATGTGCCTGGTGCT...TAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGAGCATAGGACGCCCTaGTTTCTGGCACAGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSLAWREVAPSACGPLCEHRTP*FLAQEK Trigger: CTTTTCCTGTGCCAGAAACAAGGGCGTCCTATGCTC...ACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGAGCATAGGACGCCCTaGTTTCTGGCACAGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVPVARCVATRSLRAQWREHRTP*FLAQEK Trigger: CTTTTCCTGTGCCAGAAACAAGGGCGTCCTATGCTC...CCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGAGGATGGTCATGGCATaGGGGGCACTTCCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARPSEVHGDSKLEAAEGKRMVMA*GALPHS Trigger: AGAATGTGGAAGTGCCCCCAATGCCATGACCATCCT...CTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS-3UTR CAA 90 bp | CTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTAAGATATGCCATCTaGGCAGGTGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLAFPGLEGSGPKCLWPAVRYAI*AGGSEE Trigger: TTCTTCACTGCCACCTGCCAAGATGGCATATCTTAC...AGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCACGGAGGACCGTCAAGTaGGACCTCCCATTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NGPGSPRHARVFILSPPPRRTVK*DLPLGS Trigger: ACTGCCCAATGGGAGGTCCAACTTGACGGTCCTCCG...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTCTCCTTGCTTTCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGAGGGGGTTTGAGGCTTaGGAACTTGGCAAACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PESPCFPWLGGKWPQVPVRGFEA*ELGKLS Trigger: CGAGAGTTTGCCAAGTTCCAAAGCCTCAAACCCCCT...CACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGAAAGCAAGGAGACTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGTTGCCAAAGTACTCTTaGGAGCACCAGGCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AARPSEVHGDSKLEAAEGLPKYS*EHQAHF Trigger: AAAATGTGCCTGGTGCTCCAAAGAGTACTTTGGCAA...CCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAGGTAAGATATGCCATCTaGGCAGGTGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARPSEVHGDSKLEAAEGKVRYAI*AGGSEE Trigger: TTCTTCACTGCCACCTGCCAAGATGGCATATCTTAC...CTTCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGCTTGGAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACGATTTGTTGAACTTGTaGAAGGCGAAATCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLAWREVAPSACGPLCGYDLLNL*KAKSTV Trigger: CACTGTCGATTTCGCCTTCAACAAGTTCAACAAATC...GTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTCCAAGCCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | CCCGCTGTGTGGCTACCAGGTCCCTTAGGGCTCAATGGAGGGCATCTCCATTATCCTGGAGCGCTCACTTaGGAACTTGGCAAACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAVWLPGPLGLNGGHLHYPGALT*ELGKLS Trigger: CGAGAGTTTGCCAAGTTCCAAAGTGAGCGCTCCAGG...ATAATGGAGATGCCCTCCATTGAGCCCTAAGGGACCTGGTAGCCACACAGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 90 bp | GGCCTCGGTCACTGCAGATCTGCCCATCCTTGGCCCTGCATGTGCTaGCGTCTGTTGAGCAGTTACAATTGTCCCCAATGTAACCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGHCRSAHPWPCMC*RLLSSYNCPQCNLR Trigger: ACGCAGGTTACATTGGGGACAATTGTAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTGACCGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGAAGTGGCCCCAAGTGCCTGTGGCCCGCTGTGTGGCTACCAGGTCCCTTAAAAGGAGAGATGTCCTaGTCAACAAAAGACCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGSGPKCLWPAVWLPGPLKGEMS*STKDPK Trigger: TTTCGGGTCTTTTGTTGACAAGGACATCTCTCCTTT...TAAGGGACCTGGTAGCCACACAGCGGGCCACAGGCACTTGGGGCCACTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS GCA 90 bp | GGCTGGACTCTCAATCTCACCTTCACAGCCATTCCGGATGAGGTTTaGCTTCAGGTCACACCGAGAGGTGATGGACCGTGGATTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWTLNLTFTAIPDEV*LQVTPRGDGPWIAK Trigger: TTTGGCAATCCACGGTCCATCACCTCTCGGTGTGACCTGAAGGCAAACCTCATCCGGAATGGCTGTGAAGGTGAGATTGAGAGTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGGCCTTCAGAGGTTCATGGAGACAGCAAGCTGGAGGCGGCAGAGGGGAAAAGGAGAGATGTCCTaGTCAACAAAAGACCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QPGLQRFMETASWRRQRGKGEMS*STKDPK Trigger: TTTCGGGTCTTTTGTTGACAAGGACATCTCTCCTTT...TCCCCTCTGCCGCCTCCAGCTTGCTGTCTCCATGAACCTCTGAAGGCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS TCA 90 bp | ACTGCAGATCTGCCCATCCTTGGCCCTGCATGTGCTGACGTCTGTTaGGCAGTTACAATTGTCCCCAATGTAACCTGCGTGGCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TADLPILGPACADVC*AVTIVPNVTCVAFA Trigger: TGCAAATGCCACGCAGGTTACATTGGGGACAATTGTAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 90 bp | TCTTTGCACTGGTGGTGGCAGGTCTGGTTGTCAGGTTTCCCCTGGTaGAGTAGCAAGCATTCGACACAGTCTCTCTTAGAGCTGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLHWWWQVWLSGFPW*SSKHSTQSLLELQA Trigger: TGCTTGCAGCTCTAAGAGAGACTGTGTCGAATGCTTGCTACTTCACCAGGGGAAACCTGACAACCAGACCTGCCACCACCAGTGCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGTAAGATATGCCATCTaGGCAGGTGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NGPGSPRHARVFILSPPPVRYAI*AGGSEE Trigger: TTCTTCACTGCCACCTGCCAAGATGGCATATCTTAC...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGGATTTGTTGAACTTGTaGAAGGCGAAATCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MVQEVQGTPESSSLVPLQDLLNL*KAKSTV Trigger: CACTGTCGATTTCGCCTTCAACAAGTTCAACAAATC...CTGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCAGGAAGTCCAAGGCACGCCAGAGTCTTCATCCTTAGTCCCCCTCCAGATTTGTTGAACTTGTaGAAGGCGAAATCGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NGPGSPRHARVFILSPPPDLLNL*KAKSTV Trigger: CACTGTCGATTTCGCCTTCAACAAGTTCAACAAATC...TGGAGGGGGACTAAGGATGAAGACTCTGGCGTGCCTTGGACTTCCTGGACCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 90 bp | GGTGGCAGTGAAGAAGAGATTAAGGTCTTCTGGCTGATCCCACACTaGCAGCTCCACTTTAGCCCGGATGCTACTGTACGCATTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGSEEEIKVFWLIPH*QLHFSPDATVRIDN Trigger: ATTATCAATGCGTACAGTAGCATCCGGGCTAAAGTGGAGCTGTCAGTGTGGGATCAGCCAGAAGACCTTAATCTCTTCTTCACTGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 90 bp | GTTGATATTGTTCTCTGCCAGCTTCTCCCCAAGCAAGGCAAGCGATaGATAGTCCATCTGGTTAGAGGCTGTGTACTCATTGGCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VDIVLCQLLPKQGKR*IVHLVRGCVLIGFI Trigger: AATGAAGCCAATGAGTACACAGCCTCTAACCAGATGGACTATCCATCGCTTGCCTTGCTTGGGGAGAAGCTGGCAGAGAACAATATCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | AAACAAACACAGACCGGAGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCACCTGGAGCGCTCACTTaGGAACTTGGCAAACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KQTQTGGQNLTFARHVLSPGALT*ELGKLS Trigger: CGAGAGTTTGCCAAGTTCCAAAGTGAGCGCTCCAGG...TGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCTCCGGTCTGTGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS GCA 90 bp | ATAGTGGTTCTTCGTCACAGCAAAAATGAGGTTGATATTGTTCTCTaGCAGCTTCTCCCCAAGCAAGGCAAGCGATGGATAGTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: IVVLRHSKNEVDIVL*QLLPKQGKRWIVHL Trigger: CAGATGGACTATCCATCGCTTGCCTTGCTTGGGGAGAAGCTGGCAGAGAACAATATCAACCTCATTTTTGCTGTGACGAAGAACCACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAAACCTAACATTTGCAAGGCATGTACTTTCAACAGGCAACTCCCCAATAGCACCAGGCACATTTaGGGTGGATCAACAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RAKPNICKACTFNRQLPNSTRHI*GGSTGI Trigger: AATGCCTGTTGATCCACCCAAAATGTGCCTGGTGCT...ATTGGGGAGTTGCCTGTTGAAAGTACATGCCTTGCAAATGTTAGGTTTTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | CCCTCTGCCTCCCGGCACAGGTTCTGGTACCCGCTCTaGTTCTCCCCCTCCTGGCACTCGCACCTAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSASRHRFWYPL*FSPSWHSHLVP Trigger: GGGCACTAGGTGCGAGTGCCAGGAGGGGGAGAACCAGAGCGGGTACCAGAACCTGTGCCGGGAGGCAGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | GTCCCGGAAGCCCACGGGCCTCAAGGTGAAAGACTGTaGTGCTTGTCTGCCGGGGCAGCTCCGAGCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VPEAHGPQGERL*CLSAGAAPSLH Trigger: GTGGAGGCTCGGAGCTGCCCCGGCAGACAAGCAGCACAGTCTTTCACCTTGAGGCCCGTGGGCTTCCGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | CGAGGTGGCACTTCCACTAGTGCATATGTTGAGCCCTaGGAGGCGCGGAACGAGCGCGCAGAGCCCGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGGTSTSAYVEP*EARNERAEPEQ Trigger: CTGCTCGGGCTCTGCGCGCTCGTTCCGCGCCTCGCAGGGCTCAACATATGCACTAGTGGAAGTGCCACCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS GCA 72 bp | GTCTGCTCGCCTGGCCGGAGGCTCACTGCAATCTCCTaGGGCGTCATCTGGATGACGTCAGAGCCCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VCSPGRRLTAIS*GVIWMTSEPVA Trigger: TGCCACGGGCTCTGACGTCATCCAGATGACGCCGCAGGAGATTGCAGTGAGCCTCCGGCCAGGCGAGCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | CTGGCGCACCTGCAGCTGGAACGTAGTCTGCTCGCCTaGCCGGAGGCTCACTGCAATCTCCTGCGGCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LAHLQLERSLLA*PEAHCNLLRRH Trigger: ATGACGCCGCAGGAGATTGCAGTGAGCCTCCGGCCAGGCGAGCAGACTACGTTCCAGCTGCAGGTGCGCCAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | GGCCGGAGGCTCACTGCAATCTCCTGCGGCGTCATCTaGATGACGTCAGAGCCCGTGGCACTGGAACCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRLTAISCGVI*MTSEPVALEPL Trigger: CAAGGGTTCCAGTGCCACGGGCTCTGACGTCATCCAGATGACGCCGCAGGAGATTGCAGTGAGCCTCCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CAA 90 bp | TGCGGCGTCATCTGGATGACGTCAGAGCCCGTGGCACTGGAACCCTaGCTGCTGAGAGGTAGGTTCCGGAGGACGTGGGTGCTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CGVIWMTSEPVALEP*LLRGRFRRTWVLLA Trigger: AGCCAGCAGCACCCACGTCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTCCAGTGCCACGGGCTCTGACGTCATCCAGATGACGCCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CAA 90 bp | ACTGTCCCGGAAGCCCACGGGCCTCAAGGTGAAAGACTGTGCTGCTaGTCTGCCGGGGCAGCTCCGAGCCTCCACGGACACTTCAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TVPEAHGPQGERLCC*SAGAAPSLHGHFKG Trigger: TCCTTTGAAGTGTCCGTGGAGGCTCGGAGCTGCCCCGGCAGACAAGCAGCACAGTCTTTCACCTTGAGGCCCGTGGGCTTCCGGGACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 72 bp | GGAGGCTCACTGCAATCTCCTGCGGCGTCATCTGGATaGCGTCAGAGCCCGTGGCACTGGAACCCTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSLQSPAASSG*RQSPWHWNPCC Trigger: GCAGCAAGGGTTCCAGTGCCACGGGCTCTGACGTCATCCAGATGACGCCGCAGGAGATTGCAGTGAGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | TCACACGTCTCCCCAAAGGCTCCAGGCTCTGTGCACTaGCACTGCCCACAGACACAACGGCCTCGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SHVSPKAPGSVH*HCPQTQRPRSL Trigger: CAGTGACCGAGGCCGTTGTGTCTGTGGGCAGTGCCAGTGCACAGAGCCTGGAGCCTTTGGGGAGACGTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | TGCTGCCAACCACAGCCAGCAGGATGGTCATGGCATTaGGGGCACTTCCACATTCTGGCTCCCGGAGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: CCQPQPAGWSWH*GHFHILAPGGP Trigger: CGGTCCTCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | CTGGAACGTAGTCTGCTCGCCTGGCCGGAGGCTCACTaGAATCTCCTGCGGCGTCATCTGGATGACGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LERSLLAWPEAH*NLLRRHLDDVR Trigger: TCTGACGTCATCCAGATGACGCCGCAGGAGATTGCAGTGAGCCTCCGGCCAGGCGAGCAGACTACGTTCCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS GCA 72 bp | TCCTCCCGAACTCACTCTCGAAGCAGGAGCACTGGTTaGAGCTACACTCTCCACGCCCGCTGCACAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRTHSRSRSTG*SYTLHARCTEA Trigger: AGCCTCTGTGCAGCGGGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGAGAGTGAGTTCGGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | ACAGCCCACAGGTGTATGTTCCATTCCCACTGCATCTaGCACTGTTGGGCTCCAGCCCCGTGCTACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TAHRCMFHSHCI*HCWAPAPCYSR Trigger: GCGGCTGTAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATGGAACATACACCTGTGGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | GGAGGATGCTGCCAACCACAGCCAGCAGGATGGTCATaGCATTGGGGGCACTTCCACATTCTGGCTCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGCCQPQPAGWS*HWGHFHILAPG Trigger: TCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CAA 72 bp | ATCTGGATGACGTCAGAGCCCGTGGCACTGGAACCCTaGCTGCTGAGAGGTAGGTTCCGGAGGACGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IWMTSEPVALEP*LLRGRFRRTWV Trigger: CACCCACGTCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTCCAGTGCCACGGGCTCTGACGTCATCCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CAA 72 bp | ATCCTCCCGAACTCACTCTCGAAGCAGGAGCACTGGTaGCAGCTACACTCTCCACGCCCGCTGCACAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILPNSLSKQEHW*QLHSPRPLHRG Trigger: GCCTCTGTGCAGCGGGCGTGGAGAGTGTAGCTGCAACCAGTGCTCCTGCTTCGAGAGTGAGTTCGGGAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | GGGGCAGCTCCGAGCCTCCACGGACACTTCAAAGGATaGCGTGTCCCCAATCTTCAGACCCTCACACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAAPSLHGHFKG*RVPNLQTLTLP Trigger: AGGAAGTGTGAGGGTCTGAAGATTGGGGACACGGCATCCTTTGAAGTGTCCGTGGAGGCTCGGAGCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | TGCCCACAGACACAACGGCCTCGGTCACTGCAGATCTaGCCATCCTTGGCCCTGCATGTGCTGACGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CPQTQRPRSLQI*PSLALHVLTSV Trigger: AACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTGACCGAGGCCGTTGTGTCTGTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 72 bp | TGGTTAGAGGCTGTGTACTCATTGGCTTCATTCAGGTaGCACTGGCCATCGTGGGGCTGGACCAGGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WLEAVYSLASFR*HWPSWGWTRPP Trigger: GGGTGGCCTGGTCCAGCCCCACGATGGCCAGTGTCACCTGAATGAAGCCAATGAGTACACAGCCTCTAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS GCA 72 bp | TTGAAGCTGTCGACTCTGTCTGTGAGAGGCAGCAGATaGCGGAACCCGAAGGAGGGGACGCAGTTGGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LKLSTLSVRGSR*RNPKEGTQLGN Trigger: ATTCCCCAACTGCGTCCCCTCCTTCGGGTTCCGGCATCTGCTGCCTCTCACAGACAGAGTCGACAGCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS GCA 72 bp | AGATGGCCAGGAGTGCCATCCCAATCAGGAGGATGCTaGCAACCACAGCCAGCAGGATGGTCATGGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: RWPGVPSQSGGC*QPQPAGWSWHW Trigger: CCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTGGGATGGCACTCCTGGCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS GCA 72 bp | TCCAGATGGCCAGGAGTGCCATCCCAATCAGGAGGATaGTGCCAACCACAGCCAGCAGGATGGTCATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRWPGVPSQSGG*CQPQPAGWSWH Trigger: ATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTGGGATGGCACTCCTGGCCATCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | GAACCCTTGCTGCTGAGAGGTAGGTTCCGGAGGACGTaGGTGCTGCTGGCTGGACTCTCAATCTCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EPLLLRGRFRRT*VLLAGLSISPS Trigger: TGAAGGTGAGATTGAGAGTCCAGCCAGCAGCACCCACGTCCTCCGGAACCTACCTCTCAGCAGCAAGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS CCA 72 bp | CAGGATGGTCATGGCATTGGGGGCACTTCCACATTCTaGCTCCCGGAGGACCGTCAAGTTGGACCTCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: QDGHGIGGTSTF*LPEDRQVGPPI Trigger: AATGGGAGGTCCAACTTGACGGTCCTCCGGGAGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CCA 72 bp | CGCTCACTTTGGAACTTGGCAAACTCTCGGCGGTCGTaGATGGTGACGAGCAGCTTCCAGATGGCCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLWNLANSRRS*MVTSSFQMARS Trigger: ACTCCTGGCCATCTGGAAGCTGCTCGTCACCATCCACGACCGCCGAGAGTTTGCCAAGTTCCAAAGTGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CAA 72 bp | CGGTTCCGGGACACCCTCTGCTTCCTCACTTCCTCGTaGAAGCTGTCGACTCTGTCTGTGAGAGGCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RFRDTLCFLTSS*KLSTLSVRGSR Trigger: TCTGCTGCCTCTCACAGACAGAGTCGACAGCTTCAACGAGGAAGTGAGGAAGCAGAGGGTGTCCCGGAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS CAA 72 bp | CAGGTGTATGTTCCATTCCCACTGCATCTGGCACTGTaGGGCTCCAGCCCCGTGCTACAGCCGCATGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVYVPFPLHLAL*GSSPVLQPHVQ Trigger: TTGCACATGCGGCTGTAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATGGAACATACACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CAA 90 bp | TGCCCACAGACACAACGGCCTCGGTCACTGCAGATCTGCCCATCCTaGGCCCTGCATGTGCTGACGTCTGTTGAGCAGTTACAATTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPQTQRPRSLQICPS*ALHVLTSVEQLQLS Trigger: GGACAATTGTAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTGACCGAGGCCGTTGTGTCTGTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS GCA 72 bp | AGTGCAGAGCATCTTTTCGCCATCCGATCTTCTCCTTaGAGACAGCAGCCTGGAGGACCGCATCAAACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAEHLFAIRSSP*RQQPGGPHQTP Trigger: GGGGGTTTGATGCGGTCCTCCAGGCTGCTGTCTGCAAGGAGAAGATCGGATGGCGAAAAGATGCTCTGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | TGGACCAGGCCACCCAGTTTTCCATCCAGTGCGATGTaGGGCACATCGTCTGTTGTGAACACCAGCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WTRPPSFPSSAM*GTSSVVNTSKC Trigger: GCACTTGCTGGTGTTCACAACAGACGATGTGCCCCACATCGCACTGGATGGAAAACTGGGTGGCCTGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | AGGTGTATGTTCCATTCCCACTGCATCTGGCACTGTTaGGCTCCAGCCCCGTGCTACAGCCGCATGTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RCMFHSHCIWHC*APAPCYSRMCN Trigger: ATTGCACATGCGGCTGTAGCACGGGGCTGGAGCCCAACAGTGCCAGATGCAGTGGGAATGGAACATACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | CAATCAGGAGGATGCTGCCAACCACAGCCAGCAGGATaGTCATGGCATTGGGGGCACTTCCACATTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QSGGCCQPQPAG*SWHWGHFHILA Trigger: AGCCAGAATGTGGAAGTGCCCCCAATGCCATGACCATCCTGCTGGCTGTGGTTGGCAGCATCCTCCTGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | TTGAGGCTTTGGAACTTGGCAAACTCTCGGCGGTCGTaGATGGTGACGAGCAGCTTCCAGATGGCCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLWNLANSRRS*MVTSSFQMARS Trigger: ACTCCTGGCCATCTGGAAGCTGCTCGTCACCATCCACGACCGCCGAGAGTTTGCCAAGTTCCAAAGCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS CAA 72 bp | ACACAACGGCCTCGGTCACTGCAGATCTGCCCATCCTaGGCCCTGCATGTGCTGACGTCTGTTGAGCAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TQRPRSLQICPS*ALHVLTSVEQL Trigger: TAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTGACCGAGGCCGTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CAA 72 bp | TGGGCTTTCTGTACAGGGGGTTTGAGGCTTTGGAACTaGGCAAACTCTCGGCGGTCGTGGATGGTGACGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WAFCTGGLRLWN*ANSRRSWMVTS Trigger: GCTCGTCACCATCCACGACCGCCGAGAGTTTGCCAAGTTCCAAAGCCTCAAACCCCCTGTACAGAAAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069345.6 |
||
| CDS GCA 72 bp | CTCAATCTCACCTTCACAGCCATTCCGGATGAGGTTTaGCTTCAGGTCACACCGAGAGGTGATGGACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LNLTFTAIPDEV*LQVTPRGDGPW Trigger: CCACGGTCCATCACCTCTCGGTGTGACCTGAAGGCAAACCTCATCCGGAATGGCTGTGAAGGTGAGATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | ATGGTGTCTACCCACGTGATCACCTCATCTTTGCACTaGTGGTGGCAGGTCTGGTTGTCAGGTTTCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MVSTHVITSSLH*WWQVWLSGFPW Trigger: CCAGGGGAAACCTGACAACCAGACCTGCCACCACCAGTGCAAAGATGAGGTGATCACGTGGGTAGACACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CAA 72 bp | AAGTGCAGAGCATCTTTTCGCCATCCGATCTTCTCCTaGCAGACAGCAGCCTGGAGGACCGCATCAAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: KCRASFRHPIFS*QTAAWRTASNP Trigger: GGGGTTTGATGCGGTCCTCCAGGCTGCTGTCTGCAAGGAGAAGATCGGATGGCGAAAAGATGCTCTGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS TCA 72 bp | CTGCCCATCCTTGGCCCTGCATGTGCTGACGTCTGTTaGGCAGTTACAATTGTCCCCAATGTAACCTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPILGPACADVC*AVTIVPNVTCV Trigger: CACGCAGGTTACATTGGGGACAATTGTAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CCA 72 bp | GTTTGCCTTCAGGTCACACCGAGAGGTGATGGACCGTaGATTGCCAAAGTACTCTTTGGAGCACCAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VCLQVTPRGDGP*IAKVLFGAPGT Trigger: TGTGCCTGGTGCTCCAAAGAGTACTTTGGCAATCCACGGTCCATCACCTCTCGGTGTGACCTGAAGGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS CCA 72 bp | GCAGCAGATGCCGGAACCCGAAGGAGGGGACGCAGTTaGGGAATAACTTGTAACCAATACACGGATTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AADAGTRRRGRS*GITCNQYTDWS Trigger: AGACCAATCCGTGTATTGGTTACAAGTTATTCCCCAACTGCGTCCCCTCCTTCGGGTTCCGGCATCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
||
| CDS TCA 72 bp | CACTGCAGATCTGCCCATCCTTGGCCCTGCATGTGCTaGCGTCTGTTGAGCAGTTACAATTGTCCCCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: HCRSAHPWPCMC*RLLSSYNCPQC Trigger: ACATTGGGGACAATTGTAACTGCTCAACAGACGTCAGCACATGCAGGGCCAAGGATGGGCAGATCTGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS TCA 72 bp | TGGTGGTGGCAGGTCTGGTTGTCAGGTTTCCCCTGGTaGAGTAGCAAGCATTCGACACAGTCTCTCTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WWWQVWLSGFPW*SSKHSTQSLLE Trigger: CTCTAAGAGAGACTGTGTCGAATGCTTGCTACTTCACCAGGGGAAACCTGACAACCAGACCTGCCACCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CAA 72 bp | TTGACGATGGTGTCTACCCACGTGATCACCTCATCTTaGCACTGGTGGTGGCAGGTCTGGTTGTCAGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTMVSTHVITSS*HWWWQVWLSGF Trigger: GAAACCTGACAACCAGACCTGCCACCACCAGTGCAAAGATGAGGTGATCACGTGGGTAGACACCATCGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
||
| CDS CAA 90 bp | TGGACCGTGGATTGCCAAAGTACTCTTTGGAGCACCAGGCACATTTaGGGTGGATCAACAGGCATTCTTCACACGAGGTGGCACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: WTVDCQSTLWSTRHI*GGSTGILHTRWHFH Trigger: GTGGAAGTGCCACCTCGTGTGAAGAATGCCTGTTGATCCACCCAAAATGTGCCTGGTGCTCCAAAGAGTACTTTGGCAATCCACGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS TCA 72 bp | GAAGAAGAGATTAAGGTCTTCTGGCTGATCCCACACTaGCAGCTCCACTTTAGCCCGGATGCTACTGTACGC | + |
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Preference number: 6 (lower is better) Translates to: EEEIKVFWLIPH*QLHFSPDATVR Trigger: GCGTACAGTAGCATCCGGGCTAAAGTGGAGCTGTCAGTGTGGGATCAGCCAGAAGACCTTAATCTCTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CAA 90 bp | CTTCAGACCCTCACACTTCCTCTGACCAGGGTAAGATATGCCATCTaGGCAGGTGGCAGTGAAGAAGAGATTAAGGTCTTCTGGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: LQTLTLPLTRVRYAI*AGGSEEEIKVFWLI Trigger: GATCAGCCAGAAGACCTTAATCTCTTCTTCACTGCCACCTGCCAAGATGGCATATCTTACCCTGGTCAGAGGAAGTGTGAGGGTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS GCA 72 bp | AGTTACAATTGTCCCCAATGTAACCTGCGTGGCATTTaGATTCTCCACAGTGACACTCTCCATGGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SYNCPQCNLRGI*ILHSDTLHGLS Trigger: GCTCAGGCCATGGAGAGTGTCACTGTGGAGAATGCAAATGCCACGCAGGTTACATTGGGGACAATTGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CAA 72 bp | GATTGCCAAAGTACTCTTTGGAGCACCAGGCACATTTaGGGTGGATCAACAGGCATTCTTCACACGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: DCQSTLWSTRHI*GGSTGILHTRW Trigger: CCACCTCGTGTGAAGAATGCCTGTTGATCCACCCAAAATGTGCCTGGTGCTCCAAAGAGTACTTTGGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS GCA 72 bp | CTTGTAACCAATACACGGATTGGTCTGGTATCTCGGTaGCGTGTAGGAGAAAGGAGAGATGTCCTTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LVTNTRIGLVSR*RVGERRDVLVN Trigger: GTTGACAAGGACATCTCTCCTTTCTCCTACACGGCACCGAGATACCAGACCAATCCGTGTATTGGTTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 |
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| CDS CAA 72 bp | CTCACACTTCCTCTGACCAGGGTAAGATATGCCATCTaGGCAGGTGGCAGTGAAGAAGAGATTAAGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LTLPLTRVRYAI*AGGSEEEIKVF Trigger: GAAGACCTTAATCTCTTCTTCACTGCCACCTGCCAAGATGGCATATCTTACCCTGGTCAGAGGAAGTGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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| CDS CAA 90 bp | CAGCTCCACTTTAGCCCGGATGCTACTGTACGCATTGATAATCAGTaGAATAATATTTTTGGAATCTCCATGCAAAATCTCCACAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: QLHFSPDATVRIDNQ*NNIFGISMQNLHSG Trigger: ACCACTGTGGAGATTTTGCATGGAGATTCCAAAAATATTATTCAACTGATTATCAATGCGTACAGTAGCATCCGGGCTAAAGTGGAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069345.6 ENSMUST00000115028.11 ENSMUST00000232262.2 |
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