RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020758

Ensembl transcript IDs: ENSMUST00000021107.14, ENSMUST00000068981.13, ENSMUST00000106458.2, ENSMUST00000106460.9, ENSMUST00000106461.8, ENSMUST00000169928.8

Found 1196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATaGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCT +
Preference number: 1 (lower is better)
Translates to: VGCSQKDLVSPLPTL*FLDSTYPCSLTTGA
Trigger: AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCTACCCCTGCTCTCTaGCTACAGGGGCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPTPAL*LQGLAL
Trigger: CAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCTACCCCTGCTCTCTaGCTACAGGGGCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPTPAL*LQGLAL
Trigger: CAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR TCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCCTACCCCTGCTCTCTaGCTACAGGGGCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFPTPAL*LQGLAL
Trigger: CAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTGGTCAGCAAGCTCGTaGGTAGAGCAGCAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: WDWTQGGMQSERPCITSTWSASS*VEQQRK
Trigger: CTTCCTCTGCTGCTCTACCCACGAGCTTGCTGACCA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGGGGCTGGCTCTGTaGTCAGCAAGCTCGTGGGTA +
Preference number: 2 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYQGLAL*SASSWV
Trigger: TACCCACGAGCTTGCTGACCACAGAGCCAGCCCCTG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTGGTCAGCAAGCTCGTaGGTAGAGCAGCAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPWSASS*VEQQRK
Trigger: CTTCCTCTGCTGCTCTACCCACGAGCTTGCTGACCA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGTCAGCAAGCTCGTaGGTAGAGCAGCAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVWSASS*VEQQRK
Trigger: CTTCCTCTGCTGCTCTACCCACGAGCTTGCTGACCA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGGTCAGCAAGCTCGTaGGTAGAGCAGCAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYWSASS*VEQQRK
Trigger: CTTCCTCTGCTGCTCTACCCACGAGCTTGCTGACCA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCTCTACCCACTTTATaGTTCCTGGACAGCACCTAC +
Preference number: 2 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPLPTL*FLDSTY
Trigger: GTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTCTACCCACTTTATaGTTCCTGGACAGCACCTAC +
Preference number: 2 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPLPTL*FLDSTY
Trigger: GTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR TCA 72 bp CTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTaGCTACAGGGGCTGGCTCTGTGGTCAGCAAGCTCG +
Preference number: 3 (lower is better)
Translates to: LYGSWTAPTPAL*LQGLALWSASS
Trigger: CGAGCTTGCTGACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR GCA 72 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTaGTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGC +
Preference number: 3 (lower is better)
Translates to: LPTLWFLDSTYP*SLTTGAGSVVS
Trigger: GCTGACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR CCA 72 bp AGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATaGTTCCTGGACAGCACCTACCCCTGCTCTCTGACT +
Preference number: 3 (lower is better)
Translates to: SQKDLVSPLPTL*FLDSTYPCSLT
Trigger: AGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGGGTAGCCGCCACGTaGCGCGCCGCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGVAAT*RAAGPA
Trigger: AGCTGGACCTGCGGCGCGTCACGTGGCGGCTACCCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTCAGAGCGCCCGCTaGTGGCGGACAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRQSAR*WRTGAG
Trigger: TCCCGCGCCTGTCCGCCAGCAGCGGGCGCTCTGACG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVSAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCSAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCPVPQA*HCTQER
Trigger: CCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCGGCAGGACACCAGTaGGCTATAGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAAGHQ*AIGPLT
Trigger: GGTGAGGGGCCCTATAGCTCACTGGTGTCCTGCCGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGSHAG*GSLLLP
Trigger: TGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARWASG*WLGTAG
Trigger: TCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCGCGGATCCAGCCGCTaGCCTCCCCTTCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGRGSSR*PPLPRP
Trigger: GGGGCGTGGAAGGGGAGGGCAGCGGCTGGATCCGCG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGCCAGAAGCTCCGCCTaGGTGTTGCAGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGARSSA*VLQRLS
Trigger: GGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGGC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTGCTGGCGGCATGGGTaGCAAAGCCAGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGCWRHG*QSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCTGGTGCTGGCGGCATaGGTGGCAAAGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLVLAA*VAKPGR
Trigger: GCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGCGGCAGGACACCAGTaGGCTATAGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCAAGHQ*AIGPLT
Trigger: GGTGAGGGGCCCTATAGCTCACTGGTGTCCTGCCGC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGGGAGATACCTGGCTaGGGTGCAGGCTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGEIPG*GAGWCR
Trigger: TCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGRSRT*RPWGDT
Trigger: GGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGTCTCAGCTGGCTCTaGCCAGCTCAGCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGLSWL*PAQLRH
Trigger: GTGACGCAGCTGAGCTGGGCAGAGCCAGCTGAGACC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGAGGGCTCTGCGGGTaGACCTGGGACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRGLCG*TWDSMV
Trigger: CACCATCGAGTCCCAGGTGCACCCGCAGAGCCCTCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCGCTCCCAGCTGAGCTaGAGGGAGTCTGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRSQLS*RESGLR
Trigger: CCTAAGCCCAGACTCCCTGCAGCTCAGCTGGGAGCG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGAGCCCAGAATGGCTaGCCAGCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRAQNG*PAVGRG
Trigger: GCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCGTCAGAGCGCCCGCTaGTGGCGGACAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRQSAR*WRTGAG
Trigger: TCCCGCGCCTGTCCGCCAGCAGCGGGCGCTCTGACG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACGCGGATCCAGCCGCTaGCCTCCCCTTCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTRGSSR*PPLPRP
Trigger: GGGGCGTGGAAGGGGAGGGCAGCGGCTGGATCCGCG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGCATTGGGGTTCTGTaGGGCGCCCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGIGVL*GAQVSM
Trigger: CATGGAGACCTGGGCGCCCCACAGAACCCCAATGCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGCATTGGGGTTCTGTaGGGCGCCCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGIGVL*GAQVSM
Trigger: CATGGAGACCTGGGCGCCCCACAGAACCCCAATGCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTGGACCCGGCAGCCTTaGCATTGGGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGWTRQP*HWGSVG
Trigger: CCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGHPVPH*LARRGQ
Trigger: CTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVDTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGSHAG*GSLLLP
Trigger: TGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCGGACAGGCGCGGGATaGGTTCCGGGGGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPRTGAG*VPGVAA
Trigger: GGCGGCTACCCCCGGAACTCATCCCGCGCCTGTCCG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGRSRT*RPWGDT
Trigger: GGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTTTCTTCTCCCCGGTaGCCCAGGCCTGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGLSSPR*PRPGTV
Trigger: TACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCAGCTGGCTCTaGCCAGCTCAGCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGLSWL*PAQLRH
Trigger: GTGACGCAGCTGAGCTGGGCAGAGCCAGCTGAGACC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCGCTCCCAGCTGAGCTaGAGGGAGTCTGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCRSQLS*RESGLR
Trigger: CCTAAGCCCAGACTCCCTGCAGCTCAGCTGGGAGCG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGAAGGTCCTGGCTGGTaGTCCTCCTTGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVEGPGW*SSLGHL
Trigger: GAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTAGAGCCCAGAATGGCTaGCCAGCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCRAQNG*PAVGRG
Trigger: GCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACGGCCATTCACCAGGTaGTCTCCCGGGGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTRPFTR*SPGGRG
Trigger: GCCCCGACCCCCGGGAGAGCACCTGGTGAATGGCCG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCTGGCGCAGGATCTTaGCCAGGTTCTGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAGAGS*PGSAPS
Trigger: AGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTGCCGGCCAGCACGTTaGCACCATCAGCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVCRPAR*HHQPRS
Trigger: ACTACGAGGCTGATGGTGCCAACGTGCTGGCCGGCA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTGCCGGCCAGCACGTTaGCACCATCAGCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGCRPAR*HHQPRS
Trigger: ACTACGAGGCTGATGGTGCCAACGTGCTGGCCGGCA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTGCTGGCGGCATGGGTaGCAAAGCCAGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGACWRHG*QSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCCGTGGGGCTGGTGCTaGCGGCATGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGPWGWC*RHGWQS
Trigger: GCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCGAGCTCCGTGGGGCTaGTGCTGGCGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRAPWG*CWRHGW
Trigger: CCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVLGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGTGCTCAGCACTCGGTaGGACAGGTGTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGVLSTR*DRCGLR
Trigger: TCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCAC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTGCTCAGCACTCGGTaGGACAGGTGTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVVLSTR*DRCGLR
Trigger: TCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCAC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRVTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAATTCGTGACCCG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRVTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAATTCGTGACCCG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSVQVA*DAFSLQ
Trigger: CTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCATCATTGCGGTTCATaGTGCCGGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVHHCGS*CRPARW
Trigger: CCAACGTGCTGGCCGGCATCATGAACCGCAATGATG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCHPQAG*RGALAH
Trigger: ATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCTGGGAAGTGTGCCTaGGTGGGAGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPGKCA*VGVLCA
Trigger: CGCACAGAGCACTCCCACTCAGGCACACTTCCCAGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCAGGAGGGTGCTGCTaGCTGCCCGGCCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPGGCC*LPGQDY
Trigger: ATAATCCTGGCCGGGCAGTCAGCAGCACCCTCCTGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPSAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGGTAGCCGCCACGTaGCGCGCCGCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGVAAT*RAAGPA
Trigger: AGCTGGACCTGCGGCGCGTCACGTGGCGGCTACCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGGACAGGCGCGGGATaGGTTCCGGGGGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRTGAG*VPGVAA
Trigger: GGCGGCTACCCCCGGAACTCATCCCGCGCCTGTCCG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCDTWLR*RLVSIW
Trigger: CCAGATCGACACCAGCCTGCACCGCAGCCAGGTATC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGGGAGATACCTGGCTaGGGTGCAGGCTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGEIPG*GAGWCR
Trigger: TCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGCCGGTGGAGCAGTTaGAGGTTTTGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSRWSS*RFCHSS
Trigger: GCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCTTTCTTCTCCCCGGTaGCCCAGGCCTGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLSSPR*PRPGTV
Trigger: TACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGCRNFV*WSLCAP
Trigger: CGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGAGGGCTCTGCGGGTaGACCTGGGACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARGLCG*TWDSMV
Trigger: CACCATCGAGTCCCAGGTGCACCCGCAGAGCCCTCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGAAGGTCCTGGCTGGTaGTCCTCCTTGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCEGPGW*SSLGHL
Trigger: GAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVTGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGAGAACACCAGCAGGTaGGTGCTGTCAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCENTSR*VLSALQ
Trigger: CTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPVPQA*HCTQER
Trigger: CCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTATGGGCGTGTCCAGGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGMGVSR*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACCTGGACACGCCCAT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTGCTGGCGGCATGGGTaGCAAAGCCAGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGCWRHG*QSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCESQPP*LAGYFL
Trigger: CAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRTPAE*VCQAHP
Trigger: TGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGADTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCRVTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAATTCGTGACCCG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVSAPSA*GCPDRQ
Trigger: CTGACGATCTGGACAACCTCAAGCAGATGGGGCAGA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGNQRGH*WVVLCL
Trigger: AAGACACAGGACTACCCATCAGTGCCCACGCTGGTT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGAGAGTATCGGAGGTaGCCTCTGTTCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGEYRR*PLFSGL
Trigger: GAGGCCTGAGAACAGAGGTCACCTCCGATACTCTCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGACTGCTGGTTGCAGTaGCAACGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCDCWLQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGTTGTCACTGCAACCAGCAGTC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAHPQAG*RGALAH
Trigger: ATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYPGCAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCCTGGGAAGTGTGCCTaGGTGGGAGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGPGKCA*VGVLCA
Trigger: CGCACAGAGCACTCCCACTCAGGCACACTTCCCAGG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYGSHAG*GSLLLP
Trigger: TGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTGRSRT*RPWGDT
Trigger: GGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTACACCAGCAGGTGGGTaGTGTCAGCCCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGATPAGG*CQPSSQ
Trigger: TTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGCGPGL*CWAQGC
Trigger: GCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGGTCTCAGCTGGCTCTaGCCAGCTCAGCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGGLSWL*PAQLRH
Trigger: GTGACGCAGCTGAGCTGGGCAGAGCCAGCTGAGACC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPRWASG*WLGTAG
Trigger: TCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTAGGACAGCGGAAGCCTaGTCCTCCCATCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCRTAEA*SSHLPR
Trigger: TCTGGGAAGATGGGAGGAGCAGGCTTCCGCTGTCCT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACACTGGCACTCGCCGTaGCCCGAGCACGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTHWHSP*PEHGLS
Trigger: GGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTGGCACTCGCCGTaGCCCGAGCACGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTHWHSP*PEHGLS
Trigger: GGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGAGGTCCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVEVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGGACCTC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVPVPQA*HCTQER
Trigger: CCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPVPQA*HCTQER
Trigger: CCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTATGGGCGTGTCCAGGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCMGVSR*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACCTGGACACGCCCAT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTGCTGGCGGCATGGGTaGCAAAGCCAGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYCWRHG*QSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTGGTGCTGGCGGCATaGGTGGCAAAGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLVLAA*VAKPGR
Trigger: GCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCGTGGGGCTGGTGCTaGCGGCATGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPWGWC*RHGWQS
Trigger: GCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGAGCTCCGTGGGGCTaGTGCTGGCGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRAPWG*CWRHGW
Trigger: CCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGAGCTCCGTGGGGCTaGTGCTGGCGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYRAPWG*CWRHGW
Trigger: CCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCPQGHQ*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGCAGCCAGTTGAAATaGATCTTCCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGSQLK*IFLDPA
Trigger: TGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAESQPP*LAGYFL
Trigger: CAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGVGAA*IGKVHP
Trigger: CGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGTGCTCAGCACTCGGTaGGACAGGTGTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAVLSTR*DRCGLR
Trigger: TCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCAC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCACCTTCAAAGACGTaGGCCCCAGGGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVSPSKT*APGQRT
Trigger: TGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCATCCGATCACACTGTaGCTCCTGCCAGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVHPITL*LLPAHL
Trigger: AAGGTGAGCTGGCAGGAGCCACAGTGTGATCGGATG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCATCCGATCACACTGTaGCTCCTGCCAGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGHPITL*LLPAHL
Trigger: AAGGTGAGCTGGCAGGAGCCACAGTGTGATCGGATG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVTTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTGGAAGAGCCCAGAATaGCTGCCCAGCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCWKSPE*LPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASVQVA*DAFSLQ
Trigger: CTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGAGAGTATCGGAGGTaGCCTCTGTTCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGEYRR*PLFSGL
Trigger: GAGGCCTGAGAACAGAGGTCACCTCCGATACTCTCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGHPQAG*RGALAH
Trigger: ATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGCGGCAGGACACCAGTaGGCTATAGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPAAGHQ*AIGPLT
Trigger: GGTGAGGGGCCCTATAGCTCACTGGTGTCCTGCCGC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCGCAGATTCTCAATaGGCAGCATCCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGLADSQ*AASGSW
Trigger: CCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACCTGGGAAGTGTGCCTaGGTGGGAGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTPGKCA*VGVLCA
Trigger: CGCACAGAGCACTCCCACTCAGGCACACTTCCCAGG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGATTATAGAGTCTGGTaGACCCCTGGATGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCDYRVW*TPGCGH
Trigger: GTGCCCGCATCCAGGGGTTCACCAGACTCTATAATC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTCGGCCGCTCCCAGCTaGGCTGCAGGGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSAAPS*AAGSLG
Trigger: GCCCAGACTCCCTGCAGCTCAGCTGGGAGCGGCCGA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAAGGGGCCTCCAACCTaGGACTCGATGGTGATGATA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVKGPPT*DSMVMI
Trigger: TATCATCACCATCGAGTCTCAGGTTGGAGGCCCCTT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGCTGGCACTCAGCATTaGTGCCAGCAGCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAAGTQH*CQQQQL
Trigger: AAGCTGCTGCTGCTGGCAGCAATGCTGAGTGCCAGC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGRSRT*RPWGDT
Trigger: GGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGGTTCTGCCCCATCTaGTTGAGGTTGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVRFCPI*LRLSRS
Trigger: CGATCTGGACAACCTCAAGCAGATGGGGCAGAACCT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCCCCTCACCCTGTaGCCCATAGGCACACACCTT +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTGPLTL*PIGTHL
Trigger: AAGGTGTGTGCCTATGGGGCACAGGGTGAGGGGCCC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWRWASG*WLGTAG
Trigger: TCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARWASG*WLGTAG
Trigger: TCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGGACAGCGGAAGCCTaGTCCTCCCATCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARTAEA*SSHLPR
Trigger: TCTGGGAAGATGGGAGGAGCAGGCTTCCGCTGTCCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGAGGGCTCTGCGGGTaGACCTGGGACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRGLCG*TWDSMV
Trigger: CACCATCGAGTCCCAGGTGCACCCGCAGAGCCCTCT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCGCTCCCAGCTGAGCTaGAGGGAGTCTGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRSQLS*RESGLR
Trigger: CCTAAGCCCAGACTCCCTGCAGCTCAGCTGGGAGCG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGAGCCCAGAATGGCTaGCCAGCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRAQNG*PAVGRG
Trigger: GCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGANSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCGGCCATTCACCAGGTaGTCTCCCGGGGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFRPFTR*SPGGRG
Trigger: GCCCCGACCCCCGGGAGAGCACCTGGTGAATGGCCG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVKEGFR*MLPPWS
Trigger: AGACCAAGGGGGCAACATCCACCTGAAACCCTCCTT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACTGGCACTCGCCGTaGCCCGAGCACGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIHWHSP*PEHGLS
Trigger: GGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCGTGGGGCTGGTGCTaGCGGCATGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPWGWC*RHGWQS
Trigger: GCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCGTGGGGCTGGTGCTaGCGGCATGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPWGWC*RHGWQS
Trigger: GCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCGAGCTCCGTGGGGCTaGTGCTGGCGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRAPWG*CWRHGW
Trigger: CCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPQGHQ*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFWKRRT*RPRRRE
Trigger: CTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALGLLS*TWKRRT
Trigger: GGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTGGACCCGGCAGCCTTaGCATTGGGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTWTRQP*HWGSVG
Trigger: CCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTGGACCCGGCAGCCTTaGCATTGGGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYWTRQP*HWGSVG
Trigger: CCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYHPVPH*LARRGQ
Trigger: CTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGESQPP*LAGYFL
Trigger: CAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAGVGAA*IGKVHP
Trigger: CGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTATAGGAGGGAGGCCTTaGGAGGAAAGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCIGGRP*EEREVR
Trigger: CCTCACTTCCCTTTCCTCCCAAGGCCTCCCTCCTAT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTCTGCGGGTGCACCTaGGACTCGATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALCGCT*DSMVMT
Trigger: TGTCATCACCATCGAGTCCCAGGTGCACCCGCAGAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYDTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTDTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGELALH*VLEEPR
Trigger: TCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTCTGGGTGTTCTCTGTaGTTTCAAGGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVSGCSL*FQGCSP
Trigger: TGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASAPSA*GCPDRQ
Trigger: CTGACGATCTGGACAACCTCAAGCAGATGGGGCAGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSVQVA*DAFSLQ
Trigger: CTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGACTGCTGGTTGCAGTaGCAACGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGDCWLQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGTTGTCACTGCAACCAGCAGTC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPGCAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGSHAG*GSLLLP
Trigger: TGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCTTTCTTCTCCCCGGTaGCCCAGGCCTGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYLSSPR*PRPGTV
Trigger: TACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPCGPGL*CWAQGC
Trigger: GCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCICGPGL*CWAQGC
Trigger: GCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGGTCTCAGCTGGCTCTaGCCAGCTCAGCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPGLSWL*PAQLRH
Trigger: GTGACGCAGCTGAGCTGGGCAGAGCCAGCTGAGACC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTCACACTGTGGCTCCTaGCAGCTCACCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCSHCGS*QLTFKD
Trigger: GTCTTTGAAGGTGAGCTGGCAGGAGCCACAGTGTGA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGAGGGCTCTGCGGGTaGACCTGGGACTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRGLCG*TWDSMV
Trigger: CACCATCGAGTCCCAGGTGCACCCGCAGAGCCCTCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCGCTCCCAGCTGAGCTaGAGGGAGTCTGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRSQLS*RESGLR
Trigger: CCTAAGCCCAGACTCCCTGCAGCTCAGCTGGGAGCG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGAGCCCAGAATGGCTaGCCAGCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRAQNG*PAVGRG
Trigger: GCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCAGCAGCTTCACCCATaGGCTGCAACAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPQQLHP*AATGPC
Trigger: GCAGGGCCCTGTTGCAGCCCATGGGTGAAGCTGCTG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGTCTCCAGGGAGGCTaGCACTCAGCATTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGLQGG*HSALLP
Trigger: TGGCAGCAATGCTGAGTGCCAGCCTCCCTGGAGACC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCCAGAAGCTCCGCCTaGGTGTTGCAGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPARSSA*VLQRLS
Trigger: GGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGCCAGAAGCTCCGCCTaGGTGTTGCAGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVARSSA*VLQRLS
Trigger: GGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGGC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGCTGGCGCAGGATCTTaGCCAGGTTCTGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTAGAGS*PGSAPS
Trigger: AGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTGCCGGCCAGCACGTTaGCACCATCAGCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTCRPAR*HHQPRS
Trigger: ACTACGAGGCTGATGGTGCCAACGTGCTGGCCGGCA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCKEGFR*MLPPWS
Trigger: AGACCAAGGGGGCAACATCCACCTGAAACCCTCCTT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPVPQA*HCTQER
Trigger: CCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTGCTGGCGGCATGGGTaGCAAAGCCAGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPCWRHG*QSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCTGGTGCTGGCGGCATaGGTGGCAAAGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLVLAA*VAKPGR
Trigger: GCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTGCTGGCGGCATaGGTGGCAAAGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFLVLAA*VAKPGR
Trigger: GCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACTGGTGCTGGCGGCATaGGTGGCAAAGCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTALVLAA*VAKPGR
Trigger: GCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCGTGGGGCTGGTGCTaGCGGCATGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPWGWC*RHGWQS
Trigger: GCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCGAGCTCCGTGGGGCTaGTGCTGGCGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQRAPWG*CWRHGW
Trigger: CCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGMRAT*SPRLTE
Trigger: CTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLGLLS*TWKRRT
Trigger: GGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGCATTGGGGTTCTGTaGGGCGCCCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGIGVL*GAQVSM
Trigger: CATGGAGACCTGGGCGCCCCACAGAACCCCAATGCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPHPVPH*LARRGQ
Trigger: CTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTESQPP*LAGYFL
Trigger: CAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWETLGL*LLAGDR
Trigger: GCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCATCCGATCACACTGTaGCTCCTGCCAGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAHPITL*LLPAHL
Trigger: AAGGTGAGCTGGCAGGAGCCACAGTGTGATCGGATG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTCTGCGGGTGCACCTaGGACTCGATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLCGCT*DSMVMT
Trigger: TGTCATCACCATCGAGTCCCAGGTGCACCCGCAGAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGVQLFT*AFLQRL
Trigger: CAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTAC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTSVQVA*DAFSLQ
Trigger: CTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCATCATTGCGGTTCATaGTGCCGGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTHHCGS*CRPARW
Trigger: CCAACGTGCTGGCCGGCATCATGAACCGCAATGATG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGAGAGTATCGGAGGTaGCCTCTGTTCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGEYRR*PLFSGL
Trigger: GAGGCCTGAGAACAGAGGTCACCTCCGATACTCTCC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGGAGAGTATCGGAGGTaGCCTCTGTTCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYGEYRR*PLFSGL
Trigger: GAGGCCTGAGAACAGAGGTCACCTCCGATACTCTCC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIHPQAG*RGALAH
Trigger: ATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPGCAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGRDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCGGCAGGACACCAGTaGGCTATAGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAAGHQ*AIGPLT
Trigger: GGTGAGGGGCCCTATAGCTCACTGGTGTCCTGCCGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCGGCAGGACACCAGTaGGCTATAGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAAGHQ*AIGPLT
Trigger: GGTGAGGGGCCCTATAGCTCACTGGTGTCCTGCCGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTCGCAGATTCTCAATaGGCAGCATCCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALADSQ*AASGSW
Trigger: CCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCTGGGAAGTGTGCCTaGGTGGGAGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPGKCA*VGVLCA
Trigger: CGCACAGAGCACTCCCACTCAGGCACACTTCCCAGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTGGGAAGTGTGCCTaGGTGGGAGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPGKCA*VGVLCA
Trigger: CGCACAGAGCACTCCCACTCAGGCACACTTCCCAGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCAGGAGGGTGCTGCTaGCTGCCCGGCCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPGGCC*LPGQDY
Trigger: ATAATCCTGGCCGGGCAGTCAGCAGCACCCTCCTGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCTCAGAGTGAAGGCTaGGCCTGGCAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAQSEG*AWQGAE
Trigger: CTCTGCCCCCTGCCAGGCTCAGCCTTCACTCTGAGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCTGGGCTTAGGGCAGTaGACACCAGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQLGLGQ*TPAVPG
Trigger: CCCCGGGACCGCTGGTGTTCACTGCCCTAAGCCCAG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTAACTGTTGGTCCATATaGGTGCTGAGAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCNCWSI*VLREPL
Trigger: CAGTGGCTCTCTCAGCACTCATATGGACCAACAGTT...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPDTWLR*RLVSIW
Trigger: CCAGATCGACACCAGCCTGCACCGCAGCCAGGTATC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGGGAGATACCTGGCTaGGGTGCAGGCTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGEIPG*GAGWCR
Trigger: TCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGRSRT*RPWGDT
Trigger: GGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGGTTCTGCCCCATCTaGTTGAGGTTGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGARFCPI*LRLSRS
Trigger: CGATCTGGACAACCTCAAGCAGATGGGGCAGAACCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCPGCLR*VLLAVC
Trigger: ACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGTGCACACAGCTGTCTaGAGGATGGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGVHTAV*RMASKP
Trigger: GGGCTTTGATGCCATCCTGCAGACAGCTGTGTGCAC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTACACCAGCAGGTGGGTaGTGTCAGCCCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPTPAGG*CQPSSQ
Trigger: TTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAGCCGGTGGAGCAGTTaGAGGTTTTGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTSRWSS*RFCHSS
Trigger: GCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAGCCGGTGGAGCAGTTaGAGGTTTTGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSRWSS*RFCHSS
Trigger: GCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPCGPGL*CWAQGC
Trigger: GCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCCAGTAGCTTCACCTaGAACTCCTTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASSSFT*NSFQVS
Trigger: GGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGGCCCCTCACCCTGTaGCCCATAGGCACACACCTT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGPLTL*PIGTHL
Trigger: AAGGTGTGTGCCTATGGGGCACAGGGTGAGGGGCCC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGTCTCAGCTGGCTCTaGCCAGCTCAGCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGLSWL*PAQLRH
Trigger: GTGACGCAGCTGAGCTGGGCAGAGCCAGCTGAGACC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGAGGGTGCTGCTGACTaGCCGGCCAGGATTATAGAG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYEGAAD*PARIIE
Trigger: CTCTATAATCCTGGCCGGGCAGTCAGCAGCACCCTC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGAGGGTGCTGCTGACTaGCCGGCCAGGATTATAGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTEGAAD*PARIIE
Trigger: CTCTATAATCCTGGCCGGGCAGTCAGCAGCACCCTC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGGCAGAGAGGGCTCTaGGGGTGCACCTGGGACTCG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGQRGL*GCTWDS
Trigger: CGAGTCCCAGGTGCACCCGCAGAGCCCTCTCTGCCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGTGAGGGAGCCTCCTaGTTCCAGGCGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGEGAS*FQALGP
Trigger: GGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYNSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCTCCACCACCTCTTCTaGTTTCTTAAGCTCGTCTAC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVLHHLF*FLKLVY
Trigger: GTAGACGAGCTTAAGAAAGCAGAAGAGGTGGTGGAG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCAGCAGCTTCACCCATaGGCTGCAACAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPQQLHP*AATGPC
Trigger: GCAGGGCCCTGTTGCAGCCCATGGGTGAAGCTGCTG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGCAGCTTCACCCATaGGCTGCAACAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYQQLHP*AATGPC
Trigger: GCAGGGCCCTGTTGCAGCCCATGGGTGAAGCTGCTG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCCAGAAGCTCCGCCTaGGTGTTGCAGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFARSSA*VLQRLS
Trigger: GGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCCAGAAGCTCCGCCTaGGTGTTGCAGCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAARSSA*VLQRLS
Trigger: GGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGGC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPRTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTTGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAKEGFR*MLPPWS
Trigger: AGACCAAGGGGGCAACATCCACCTGAAACCCTCCTT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCACTGGCACTCGCCGTaGCCCGAGCACGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWHWHSP*PEHGLS
Trigger: GGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACACTGGCACTCGCCGTaGCCCGAGCACGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAHWHSP*PEHGLS
Trigger: GGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGAGGTCCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGEVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGGACCTC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLGLLS*TWKRRT
Trigger: GGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVHPVPH*LARRGQ
Trigger: CTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYHPVPH*LARRGQ
Trigger: CTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTTTGCTGTCTAGAAGGTaGGCTTCAGACTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLLSRR*ASDSES
Trigger: CGACTCTGAGTCTGAAGCCCACCTTCTAGACAGCAA...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTGGGCCTCTGGCTGCTaGCTGGGGACCGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQWASGC*LGTAGR
Trigger: ACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTGVGAA*IGKVHP
Trigger: CGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTTCTGTGCAGGGAGTTaGCGCTGCCTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGFCAGS*RCLDRQ
Trigger: TTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRTPAE*VCQAHP
Trigger: TGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTCACCTTCAAAGACGTaGGCCCCAGGGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSPSKT*APGQRT
Trigger: TGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTCTGCGGGTGCACCTaGGACTCGATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLCGCT*DSMVMT
Trigger: TGTCATCACCATCGAGTCCCAGGTGCACCCGCAGAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPDTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTGGAAGAGCCCAGAATaGCTGCCCAGCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYWKSPE*LPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYVQLFT*AFLQRL
Trigger: CAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTAC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCATCATTGCGGTTCATaGTGCCGGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPHHCGS*CRPARW
Trigger: CCAACGTGCTGGCCGGCATCATGAACCGCAATGATG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYNQRGH*WVVLCL
Trigger: AAGACACAGGACTACCCATCAGTGCCCACGCTGGTT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGACTGCTGGTTGCAGTaGCAACGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPDCWLQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGTTGTCACTGCAACCAGCAGTC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPGCAG*QGCGPP
Trigger: AGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGDESV*FMRLLS
Trigger: GGACAGGAGTCTCATAAATCAAACACTTTCATCGCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGATTATAGAGTCTGGTaGACCCCTGGATGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTDYRVW*TPGCGH
Trigger: GTGCCCGCATCCAGGGGTTCACCAGACTCTATAATC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCAGGAGGGTGCTGCTaGCTGCCCGGCCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPGGCC*LPGQDY
Trigger: ATAATCCTGGCCGGGCAGTCAGCAGCACCCTCCTGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVDTWLR*RLVSIW
Trigger: CCAGATCGACACCAGCCTGCACCGCAGCCAGGTATC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYDTWLR*RLVSIW
Trigger: CCAGATCGACACCAGCCTGCACCGCAGCCAGGTATC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGGGAGATACCTGGCTaGGGTGCAGGCTGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWGEIPG*GAGWCR
Trigger: TCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGTGCACACAGCTGTCTaGAGGATGGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYVHTAV*RMASKP
Trigger: GGGCTTTGATGCCATCCTGCAGACAGCTGTGTGCAC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATACACCAGCAGGTGGGTaGTGTCAGCCCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYTPAGG*CQPSSQ
Trigger: TTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTLDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYLDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGCCGGTGGAGCAGTTaGAGGTTTTGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISRWSS*RFCHSS
Trigger: GCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTTTCTTCTCCCCGGTaGCCCAGGCCTGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYLSSPR*PRPGTV
Trigger: TACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFCGPGL*CWAQGC
Trigger: GCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPCRNFV*WSLCAP
Trigger: CGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVLYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGGGCCCCTCACCCTGTaGCCCATAGGCACACACCTT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFGPLTL*PIGTHL
Trigger: AAGGTGTGTGCCTATGGGGCACAGGGTGAGGGGCCC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAGGACAGCGGAAGCCTaGTCCTCCCATCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPRTAEA*SSHLPR
Trigger: TCTGGGAAGATGGGAGGAGCAGGCTTCCGCTGTCCT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCGCTCCCAGCTGAGCTaGAGGGAGTCTGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWRSQLS*RESGLR
Trigger: CCTAAGCCCAGACTCCCTGCAGCTCAGCTGGGAGCG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGAGCCCAGAATGGCTaGCCAGCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRAQNG*PAVGRG
Trigger: GCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCAGCAGCTTCACCCATaGGCTGCAACAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFQQLHP*AATGPC
Trigger: GCAGGGCCCTGTTGCAGCCCATGGGTGAAGCTGCTG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCCTTCTTGCAGCGGTTaGCCAGGTCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLPSCSG*PGLQGG
Trigger: GCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWRTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFRTCRP*GDTWLR
Trigger: CCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTRGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGCTGGCGCAGGATCTTaGCCAGGTTCTGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVAGAGS*PGSAPS
Trigger: AGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPTGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCITGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGAGAACACCAGCAGGTaGGTGCTGTCAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVENTSR*VLSALQ
Trigger: CTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGAGAACACCAGCAGGTaGGTGCTGTCAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYENTSR*VLSALQ
Trigger: CTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPGLCC*AQGCHR
Trigger: GCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSSTPS*NSTMPR
Trigger: CCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGCATTGGGGTTCTGTaGGGCGCCCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGIGVL*GAQVSM
Trigger: CATGGAGACCTGGGCGCCCCACAGAACCCCAATGCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTGGACCCGGCAGCCTTaGCATTGGGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFWTRQP*HWGSVG
Trigger: CCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGCAGCCAGTTGAAATaGATCTTCCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGSQLK*IFLDPA
Trigger: TGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTCGCTGGGTACTTCCTaGTGGGTGCGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSLGTS*WVRQDT
Trigger: GGTGTCCTGCCGCACCCACCAGGAAGTACCCAGCGA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYESQPP*LAGYFL
Trigger: CAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGVGAA*IGKVHP
Trigger: CGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTTCTGTGCAGGGAGTTaGCGCTGCCTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYFCAGS*RCLDRQ
Trigger: TTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTTCTGTGCAGGGAGTTaGCGCTGCCTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTFCAGS*RCLDRQ
Trigger: TTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAATAGGAGGGAGGCCTTaGGAGGAAAGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTIGGRP*EEREVR
Trigger: CCTCACTTCCCTTTCCTCCCAAGGCCTCCCTCCTAT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCA +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPRTPAE*VCQAHP
Trigger: TGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCACCTTCAAAGACGTaGGCCCCAGGGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSPSKT*APGQRT
Trigger: TGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCATCCGATCACACTGTaGCTCCTGCCAGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTHPITL*LLPAHL
Trigger: AAGGTGAGCTGGCAGGAGCCACAGTGTGATCGGATG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTTTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTTTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYTTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTCTGCGGGTGCACCTaGGACTCGATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILCGCT*DSMVMT
Trigger: TGTCATCACCATCGAGTCCCAGGTGCACCCGCAGAG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCCGGAAGGTCCTGGCTaGTGCTCCTCCTTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLPEGPG*CSSLGH
Trigger: ATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGATACCCTCACGCTCTaGCCCGAAGCCCTCGGTCGT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWDTLTL*PEALGR
Trigger: ACGACCGAGGGCTTCGGGCCAGAGCGTGAGGGTATC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGGAAGAGCCCAGAATaGCTGCCCAGCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIWKSPE*LPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRVTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAATTCGTGACCCG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCAAGGCTGCTCTCCATaGCCAGGATGCTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLQGCSP*PGCSLP
Trigger: GGGGAGAGAGCATCCTGGTCATGGAGAGCAGCCTTG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWWCSRW*AGAGSW
Trigger: CCAAGATCCTGCGCCAGCTCACCAGCGACTACACCA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVLHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYLHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGACTGCTGGTTGCAGTaGCAACGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVDCWLQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGTTGTCACTGCAACCAGCAGTC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLHPQAG*RGALAH
Trigger: ATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTCGCAGATTCTCAATaGGCAGCATCCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLADSQ*AASGSW
Trigger: CCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAAGGGGCCTCCAACCTaGGACTCGATGGTGATGATA +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTKGPPT*DSMVMI
Trigger: TATCATCACCATCGAGTCTCAGGTTGGAGGCCCCTT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCTGGCACTCAGCATTaGTGCCAGCAGCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPAGTQH*CQQQQL
Trigger: AAGCTGCTGCTGCTGGCAGCAATGCTGAGTGCCAGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGATGCTCTCTCCCCTaGAGCCTGCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGCSLP*SLQPEA
Trigger: AGCTTCTGGCTGCAGGCTGCAGGGGAGAGAGCATCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWDTWLR*RLVSIW
Trigger: CCAGATCGACACCAGCCTGCACCGCAGCCAGGTATC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGPGCLR*VLLAVC
Trigger: ACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGTGCACACAGCTGTCTaGAGGATGGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPVHTAV*RMASKP
Trigger: GGGCTTTGATGCCATCCTGCAGACAGCTGTGTGCAC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCACACCAGCAGGTGGGTaGTGTCAGCCCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFTPAGG*CQPSSQ
Trigger: TTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACACCAGCAGGTGGGTaGTGTCAGCCCTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWTPAGG*CQPSSQ
Trigger: TTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACACTCCAGCCCTCATTaGACACACAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTHSSPH*THSVHT
Trigger: TGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCACTCCAGCCCTCATTaGACACACAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYHSSPH*THSVHT
Trigger: TGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGGGACAGTCACAGCTaGGGCCTGTCCAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGDSHS*GLSNQA
Trigger: AGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGRCSCK*SRHPHP
Trigger: GGGATGAGGATGACGACTGCACTTACAGCTACAACG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVCRNFV*WSLCAP
Trigger: CGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYCRNFV*WSLCAP
Trigger: CGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCTGGAACTCCACCATaGCCCGGGCATCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPGTPP*PGHPAL
Trigger: CAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCCAGTAGCTTCACCTaGAACTCCTTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSSSFT*NSFQVS
Trigger: GGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTCCAGTAGCTTCACCTaGAACTCCTTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYSSSFT*NSFQVS
Trigger: GGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGGCCCCTCACCCTGTaGCCCATAGGCACACACCTT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGPLTL*PIGTHL
Trigger: AAGGTGTGTGCCTATGGGGCACAGGGTGAGGGGCCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGTACTTCCTGGTGGGTaGGGCAGGACACCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFVLPGG*GRTPVS
Trigger: GCTCACTGGTGTCCTGCCGCACCCACCAGGAAGTAC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCGGCCATTCACCAGGTaGTCAGTGTCATCAGAAACG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRPFTR*SVSSET
Trigger: CGTTTCTGATGACACTGAGCACCTGGTGAATGGCCG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCACACTGTGGCTCCTaGCAGCTCACCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSHCGS*QLTFKD
Trigger: GTCTTTGAAGGTGAGCTGGCAGGAGCCACAGTGTGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGAAGGTCCTGGCTGGTaGTCCTCCTTGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWEGPGW*SSLGHL
Trigger: GAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGAAGGTCCTGGCTGGTaGTCCTCCTTGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFEGPGW*SSLGHL
Trigger: GAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGAAGGTCCTGGCTGGTaGTCCTCCTTGGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAEGPGW*SSLGHL
Trigger: GAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVNSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTCCACCACCTCTTCTaGTTTCTTAAGCTCGTCTAC +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALHHLF*FLKLVY
Trigger: GTAGACGAGCTTAAGAAAGCAGAAGAGGTGGTGGAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCTGGCGCAGGATCTTaGCCAGGTTCTGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAGAGS*PGSAPS
Trigger: AGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCTGGCGCAGGATCTTaGCCAGGTTCTGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFAGAGS*PGSAPS
Trigger: AGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGAGAACACCAGCAGGTaGGTGCTGTCAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFENTSR*VLSALQ
Trigger: CTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGRQTR*RTPAGG
Trigger: CCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATGCCGGCCAGCACGTTaGCACCATCAGCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTACRPAR*HHQPRS
Trigger: ACTACGAGGCTGATGGTGCCAACGTGCTGGCCGGCA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPQGHQ*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGACGGCGACCAAGGGTaGCAGTGCCCACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQDGDQG*QCPQGH
Trigger: ATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLLSWT*KRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVLGLLS*TWKRRT
Trigger: GGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTGGACCCGGCAGCCTTaGCATTGGGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQWTRQP*HWGSVG
Trigger: CCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGCAGCCAGTTGAAATaGATCTTCCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGSQLK*IFLDPA
Trigger: TGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACTGGGTACTTCCTGGTaGGTGCGGCAGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTALGTSW*VRQDTS
Trigger: ACTGGTGTCCTGCCGCACCCACCAGGAAGTACCCAG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVGVGAA*IGKVHP
Trigger: CGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGTGCTCAGCACTCGGTaGGACAGGTGTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFVLSTR*DRCGLR
Trigger: TCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCAC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTGCTCAGCACTCGGTaGGACAGGTGTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVLSTR*DRCGLR
Trigger: TCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGGGTGGAGTAGTCCCTaGGAAGTGTGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFGWSSP*EVCLSG
Trigger: CCCACTCAGGCACACTTCCCAGGGACTACTCCACCC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCITTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGGAAGAGCCCAGAATaGCTGCCCAGCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYWKSPE*LPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTGGAAGAGCCCAGAATaGCTGCCCAGCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPWKSPE*LPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTELALH*VLEEPR
Trigger: TCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARVTNS*VTCRVR
Trigger: CCTCACCCGGCATGTGACCCAGGAATTCGTGACCCG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPVQLFT*AFLQRL
Trigger: CAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTAC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTCTGGGTGTTCTCTGTaGTTTCAAGGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTSGCSL*FQGCSP
Trigger: TGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCTGGGTGTTCTCTGTaGTTTCAAGGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSGCSL*FQGCSP
Trigger: TGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSAPSA*GCPDRQ
Trigger: CTGACGATCTGGACAACCTCAAGCAGATGGGGCAGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLSVGR*LCPQTF
Trigger: GAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTLSVGR*LCPQTF
Trigger: GAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAG...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSVQVA*DAFSLQ
Trigger: CTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCATCATTGCGGTTCATaGTGCCGGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWHHCGS*CRPARW
Trigger: CCAACGTGCTGGCCGGCATCATGAACCGCAATGATG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVNQRGH*WVVLCL
Trigger: AAGACACAGGACTACCCATCAGTGCCCACGCTGGTT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYNQRGH*WVVLCL
Trigger: AAGACACAGGACTACCCATCAGTGCCCACGCTGGTT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACTCCACGATGTTGGATaGATCCTCCTGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTALHDVG*ILLQDA
Trigger: GGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLEGAAS*NGSSWT
Trigger: GGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYRDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTCGCAGATTCTCAATaGGCAGCATCCGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILADSQ*AASGSW
Trigger: CCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAACTGTTGGTCCATATaGGTGCTGAGAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTNCWSI*VLREPL
Trigger: CAGTGGCTCTCTCAGCACTCATATGGACCAACAGTT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCTGGCACTCAGCATTaGTGCCAGCAGCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAAGTQH*CQQQQL
Trigger: AAGCTGCTGCTGCTGGCAGCAATGCTGAGTGCCAGC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCTGGCACTCAGCATTaGTGCCAGCAGCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAGTQH*CQQQQL
Trigger: AAGCTGCTGCTGCTGGCAGCAATGCTGAGTGCCAGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGGTTCTGCCCCATCTaGTTGAGGTTGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRFCPI*LRLSRS
Trigger: CGATCTGGACAACCTCAAGCAGATGGGGCAGAACCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGTGCACACAGCTGTCTaGAGGATGGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPVHTAV*RMASKP
Trigger: GGGCTTTGATGCCATCCTGCAGACAGCTGTGTGCAC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAATGGGGATGATGTTATaGTTGGCAAGCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTMGMML*LASRRT
Trigger: GGTTCGCCTGCTTGCCAAGCATAACATCATCCCCAT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCATGGGGATGATGTTATaGTTGGCAAGCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTMGMML*LASRRT
Trigger: GGTTCGCCTGCTTGCCAAGCATAACATCATCCCCAT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACTCCAGCCCTCATTaGACACACAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIHSSPH*THSVHT
Trigger: TGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRCSCK*SRHPHP
Trigger: GGGATGAGGATGACGACTGCACTTACAGCTACAACG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIASTSS*FSSSSS
Trigger: TGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAGSWR*LDRQSP
Trigger: TGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCTGCAGTCATTCTGTaGAGGGAGTTGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAAVIL*RELALP
Trigger: AGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGGGTGCTGCTGACTaGCCGGCCAGGATTATAGAG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLEGAAD*PARIIE
Trigger: CTCTATAATCCTGGCCGGGCAGTCAGCAGCACCCTC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWNSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTANSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPRGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWTGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAACGGGGGATCACTGTTaGGCCAGGGCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTATGDHC*ARAPSV
Trigger: AACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGAGAACACCAGCAGGTaGGTGCTGTCAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQENTSR*VLSALQ
Trigger: CTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAATGGGCGTGTCCAGGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAMGVSR*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACCTGGACACGCCCAT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGATGGGCGTGTCCAGGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWMGVSR*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACCTGGACACGCCCAT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCATGGGCGTGTCCAGGTaGTCAGAGGCCATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFMGVSR*SEAIRF
Trigger: GAACCTGATGGCCTCTGACCACCTGGACACGCCCAT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYVSTMV*SCFFPV
Trigger: CACCGGGAAAAAGCAAGACCACACCATTGTGGACAC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPQGHQ*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLPQGHQ*PPPAAA
Trigger: AGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCAGCATCCGGTTCTTaGGGTTGTCCACGAGCACCT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAASGS*GCPRAP
Trigger: AGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWRTPAE*VCQAHP
Trigger: TGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTCACCTTCAAAGACGTaGGCCCCAGGGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYSPSKT*APGQRT
Trigger: TGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPTTTEV*PGLGML
Trigger: CAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCTGGTGCTCCTCCTTaGGCCATCTCACAGGTCACC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQAGAPP*AISQVT
Trigger: GGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIELALH*VLEEPR
Trigger: TCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVQLFT*AFLQRL
Trigger: CAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYSWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSAPSA*GCPDRQ
Trigger: CTGACGATCTGGACAACCTCAAGCAGATGGGGCAGA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTASAPSA*GCPDRQ
Trigger: CTGACGATCTGGACAACCTCAAGCAGATGGGGCAGA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTC +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLSVGR*LCPQTF
Trigger: GAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATCATTGCGGTTCATaGTGCCGGCCAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQHHCGS*CRPARW
Trigger: CCAACGTGCTGGCCGGCATCATGAACCGCAATGATG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGACTGCTGGTTGCAGTaGCAACGGCCACACTCACAG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQDCWLQ*QRPHSQ
Trigger: CTGTGAGTGTGGCCGTTGTCACTGCAACCAGCAGTC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRDTGW*VPLRAP
Trigger: AGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGACCTCGTAGGCTGTaGTCTCGCCATTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRPRRL*SRHWSQ
Trigger: CTGAGACCAATGGCGAGATCACAGCCTACGAGGTCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAAGGGGCCTCCAACCTaGGACTCGATGGTGATGATA +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVKGPPT*DSMVMI
Trigger: TATCATCACCATCGAGTCTCAGGTTGGAGGCCCCTT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAACTGTTGGTCCATATaGGTGCTGAGAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPNCWSI*VLREPL
Trigger: CAGTGGCTCTCTCAGCACTCATATGGACCAACAGTT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCTGGCACTCAGCATTaGTGCCAGCAGCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQAGTQH*CQQQQL
Trigger: AAGCTGCTGCTGCTGGCAGCAATGCTGAGTGCCAGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPILARF*PICLRL
Trigger: CAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGAT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPGCLR*VLLAVC
Trigger: ACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWQERPG*LRCVLL
Trigger: AAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGTGCACACAGCTGTCTaGAGGATGGCATCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFVHTAV*RMASKP
Trigger: GGGCTTTGATGCCATCCTGCAGACAGCTGTGTGCAC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCATGGGGATGATGTTATaGTTGGCAAGCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIMGMML*LASRRT
Trigger: GGTTCGCCTGCTTGCCAAGCATAACATCATCCCCAT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTALDESS*RTPREE
Trigger: CTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGCCGGTGGAGCAGTTaGAGGTTTTGCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSRWSS*RFCHSS
Trigger: GCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRCSCK*SRHPHP
Trigger: GGGATGAGGATGACGACTGCACTTACAGCTACAACG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQCRNFV*WSLCAP
Trigger: CGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVASTSS*FSSSSS
Trigger: TGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPASTSS*FSSSSS
Trigger: TGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCCACTGAGGGCACCTTaGTGTCTAGAAGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLPLRAP*CLEGGL
Trigger: AAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGCCATTCACCAGGTaGTCAGTGTCATCAGAAACG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYRPFTR*SVSSET
Trigger: CGTTTCTGATGACACTGAGCACCTGGTGAATGGCCG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACACTGTGGCTCCTaGCAGCTCACCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSHCGS*QLTFKD
Trigger: GTCTTTGAAGGTGAGCTGGCAGGAGCCACAGTGTGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQNSWVT*RVREPP
Trigger: AGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTCCACCACCTCTTCTaGTTTCTTAAGCTCGTCTAC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLHHLF*FLKLVY
Trigger: GTAGACGAGCTTAAGAAAGCAGAAGAGGTGGTGGAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGAGGTCCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAEVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGGACCTC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGAGGTCCGGGGACACTaGAAGTTGTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWEVRGH*KLSYSQ
Trigger: CTGCGAGTATGACAACTTCCAGTGTCCCCGGACCTC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGTLCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCCACCTTCAGTTCATaGAAGGACCCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQATFSS*KDPCST
Trigger: GGTGGAGCAGGGGTCCTTCCATGAACTGAAGGTGGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGCAGCCAGTTGAAATaGATCTTCCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGSQLK*IFLDPA
Trigger: TGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGCAGCCAGTTGAAATaGATCTTCCTGGACCCGGCA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWGSQLK*IFLDPA
Trigger: TGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTTGCTGTCTAGAAGGTaGGCTTCAGACTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILLSRR*ASDSES
Trigger: CGACTCTGAGTCTGAAGCCCACCTTCTAGACAGCAA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATTCTGTGCAGGGAGTTaGCGCTGCCTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAFCAGS*RCLDRQ
Trigger: TTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGATAGGAGGGAGGCCTTaGGAGGAAAGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLIGGRP*EEREVR
Trigger: CCTCACTTCCCTTTCCTCCCAAGGCCTCCCTCCTAT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQRTPAE*VCQAHP
Trigger: TGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTCACCTTCAAAGACGTaGGCCCCAGGGCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSPSKT*APGQRT
Trigger: TGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCATCCGATCACACTGTaGCTCCTGCCAGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFHPITL*LLPAHL
Trigger: AAGGTGAGCTGGCAGGAGCCACAGTGTGATCGGATG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCTCTGCGGGTGCACCTaGGACTCGATGGTGATGACA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQLCGCT*DSMVMT
Trigger: TGTCATCACCATCGAGTCCCAGGTGCACCCGCAGAG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVELALH*VLEEPR
Trigger: TCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPELALH*VLEEPR
Trigger: TCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
3UTR CAA 72 bp GGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTaGTATCACCTCTACCCACTTTATGGTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: GLDPGWDAVRKT*YHLYPLYGSWT
Trigger: TGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLSVGR*LCPQTF
Trigger: GAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQNQRGH*WVVLCL
Trigger: AAGACACAGGACTACCCATCAGTGCCCACGCTGGTT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPKSPLK*QRADRT
Trigger: AGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLVSQSS*SHRWCP
Trigger: CGGACACCACCTGTGAGATCAACTACTCTGCGATAC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGDESV*FMRLLS
Trigger: GGACAGGAGTCTCATAAATCAAACACTTTCATCGCC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTCGGTTGTCCTCATTaGCCAGTCCATAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVGCPH*PVHSRP
Trigger: AGGTCTGCTATGGACTGGTCAATGAGGACAACCGAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGATTATAGAGTCTGGTaGACCCCTGGATGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQDYRVW*TPGCGH
Trigger: GTGCCCGCATCCAGGGGTTCACCAGACTCTATAATC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAAGGGGCCTCCAACCTaGGACTCGATGGTGATGATA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWKGPPT*DSMVMI
Trigger: TATCATCACCATCGAGTCTCAGGTTGGAGGCCCCTT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAACTGTTGGTCCATATaGGTGCTGAGAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVNCWSI*VLREPL
Trigger: CAGTGGCTCTCTCAGCACTCATATGGACCAACAGTT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAACTGTTGGTCCATATaGGTGCTGAGAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPNCWSI*VLREPL
Trigger: CAGTGGCTCTCTCAGCACTCATATGGACCAACAGTT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGGTTCTGCCCCATCTaGTTGAGGTTGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRFCPI*LRLSRS
Trigger: CGATCTGGACAACCTCAAGCAGATGGGGCAGAACCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAGGTTCTGCCCCATCTaGTTGAGGTTGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARFCPI*LRLSRS
Trigger: CGATCTGGACAACCTCAAGCAGATGGGGCAGAACCT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVPGCLR*VLLAVC
Trigger: ACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTCCACTGCCCGGAGATaGACATTGTATGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSTARR*TLYVPT
Trigger: AGTGGGCACATACAATGTGCATCTCCGGGCAGTGGA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCACTCCAGCCCTCATTaGACACACAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFHSSPH*THSVHT
Trigger: TGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCACTCCAGCCCTCATTaGACACACAGTGTCCACACA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWHSSPH*THSVHT
Trigger: TGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGAGCGACTGCTGGTTaGAGTGACAACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQRATAG*SDNGHT
Trigger: AGTGTGGCCGTTGTCACTGCAACCAGCAGTCGCTCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRCSCK*SRHPHP
Trigger: GGGATGAGGATGACGACTGCACTTACAGCTACAACG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFASTSS*FSSSSS
Trigger: TGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTCCAGTAGCTTCACCTaGAACTCCTTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSSSFT*NSFQVS
Trigger: GGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTCCAGTAGCTTCACCTaGAACTCCTTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSSSFT*NSFQVS
Trigger: GGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCGGCCATTCACCAGGTaGTCAGTGTCATCAGAAACG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFRPFTR*SVSSET
Trigger: CGTTTCTGATGACACTGAGCACCTGGTGAATGGCCG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCGGCCATTCACCAGGTaGTCAGTGTCATCAGAAACG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLRPFTR*SVSSET
Trigger: CGTTTCTGATGACACTGAGCACCTGGTGAATGGCCG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTCACACTGTGGCTCCTaGCAGCTCACCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSHCGS*QLTFKD
Trigger: GTCTTTGAAGGTGAGCTGGCAGGAGCCACAGTGTGA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTCCACCACCTCTTCTaGTTTCTTAAGCTCGTCTAC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILHHLF*FLKLVY
Trigger: GTAGACGAGCTTAAGAAAGCAGAAGAGGTGGTGGAG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQRGSNT*NTKLRS
Trigger: GGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAKEGFR*MLPPWS
Trigger: AGACCAAGGGGGCAACATCCACCTGAAACCCTCCTT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFKEGFR*MLPPWS
Trigger: AGACCAAGGGGGCAACATCCACCTGAAACCCTCCTT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVVSTMV*SCFFPV
Trigger: CACCGGGAAAAAGCAAGACCACACCATTGTGGACAC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: WDWTQGGMQSERPCITSTTLCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTTCTGTGCAGGGAGTTaGCGCTGCCTGGATAGGCAA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQFCAGS*RCLDRQ
Trigger: TTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFLCTGF*KSPEWL
Trigger: CAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTCTGGGTGTTCTCTGTaGTTTCAAGGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSGCSL*FQGCSP
Trigger: TGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFPGCLR*VLLAVC
Trigger: ACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCATGGGGATGATGTTATaGTTGGCAAGCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFMGMML*LASRRT
Trigger: GGTTCGCCTGCTTGCCAAGCATAACATCATCCCCAT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARCSCK*SRHPHP
Trigger: GGGATGAGGATGACGACTGCACTTACAGCTACAACG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCAAAGCCAGGGCGCTaGACATTGTTGGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQAKPGR*TLLVIF
Trigger: GAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQASTSS*FSSSSS
Trigger: TGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAATCCCGGTGTCCGTGTaGTGTATTATCCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAIPVSV*CIILCA
Trigger: AGCACACAGGATAATACAGCACACGGACACCGGGAT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTCACACTGTGGCTCCTaGCAGCTCACCTTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSHCGS*QLTFKD
Trigger: GTCTTTGAAGGTGAGCTGGCAGGAGCCACAGTGTGA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPHVCL*DADFVH
Trigger: GTGGACAAAGTCAGCGTCCCACAGACAGACATGAGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQAAPRC*MNPPAG
Trigger: TCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPGCPG*SEFDRR
Trigger: CCTTCTATCGAATTCGCTCCAACCTGGACATCCGGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLVSTMV*SCFFPV
Trigger: CACCGGGAAAAAGCAAGACCACACCATTGTGGACAC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFVSTMV*SCFFPV
Trigger: CACCGGGAAAAAGCAAGACCACACCATTGTGGACAC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GYMWDWTQGGMQSERPCITLCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTTGCTGTCTAGAAGGTaGGCTTCAGACTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLLSRR*ASDSES
Trigger: CGACTCTGAGTCTGAAGCCCACCTTCTAGACAGCAA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTTGCTGTCTAGAAGGTaGGCTTCAGACTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFLLSRR*ASDSES
Trigger: CGACTCTGAGTCTGAAGCCCACCTTCTAGACAGCAA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTCTGGGTGTTCTCTGTaGTTTCAAGGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSGCSL*FQGCSP
Trigger: TGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGTTGGAGAAGTCCATaGGGATATACAGATCCACGG +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSWRSP*GYTDPR
Trigger: CCGTGGATCTGTATATCCTCATGGACTTCTCCAACT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQLSVGR*LCPQTF
Trigger: GAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGDESV*FMRLLS
Trigger: GGACAGGAGTCTCATAAATCAAACACTTTCATCGCC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATCCTGGCCTGAACCTTaGACTTGTAAGGAACGTTCT +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTASWPEP*TCKERS
Trigger: AGAACGTTCCTTACAAGTTCAAGGTTCAGGCCAGGA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGATGGGGATGATGTTATaGTTGGCAAGCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQMGMML*LASRRT
Trigger: GGTTCGCCTGCTTGCCAAGCATAACATCATCCCCAT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVLYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGCAAAGATGGGGATaGTGTTATGCTTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQQQRWG*CYAWQA
Trigger: TGCTTGCCAAGCATAACATCATCCCCATCTTTGCTG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGDESV*FMRLLS
Trigger: GGACAGGAGTCTCATAAATCAAACACTTTCATCGCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR GCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFLYYPV*YRRPGT
Trigger: AGTCCCAGGTCTCCTATAGCACACAGGATAATACAG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACAGTCTTTCTTTTTGTaGACCAGGACTGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAQSFFL*TRTVLL
Trigger: CAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLTLCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CCA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFTLCPQ*CGLAFS
Trigger: GGAAAAAGCAAGACCACACCATTGTGGACACAGTGT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR TCA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGDESV*FMRLLS
Trigger: GGACAGGAGTCTCATAAATCAAACACTTTCATCGCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAGTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: GWPRRAPNLGLLSWT*KRRTWRPRRRESTS
Trigger: GGAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GTGCTGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VLGWPRRAPNLGLLS*TWKRRTWRPRRRES
Trigger: CGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp TGGTTGTGCTGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTaGGTTGGACTTGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: WLCWAGPGGLRTWGC*VGLGSGGPGGHAGG
Trigger: CCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp CAAGGCGCAGGGACAGCCCGTAGGGTACGAGCTCCGTGGGGCTGGTaGTGGCGGCATGGGTGGCAAAGCCAGGGCGCTGCACATTGTTGG +
Preference number: 5 (lower is better)
Translates to: QGAGTARRVRAPWGW*WRHGWQSQGAAHCW
Trigger: CCAACAATGTGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCGTACCCTACGGGCTGTCCCTGCGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp ACCTGGAACACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTTaGAGGCCTTGGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: TWNTKLRSSPGRSRT*RPWGDTWLRCRLVS
Trigger: CGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGTGTTCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp GAGCCACTGGCCGTTAAGGTCCGGGTCACGAATTCCTGGGTCACATaGCGGGTGAGGGAGCCTCCTGCTTCCAGGCGCTGGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: EPLAVKVRVTNSWVT*RVREPPASRRWVPR
Trigger: CCTGGGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATTCGTGACCCGGACCTTAACGGCCAGTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp ACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTCGATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TKLRSSPGRSRTCRP*GDTWLRCRLVSIWV
Trigger: CACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp TGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAGTCGACCTCCTaGAGCTCCAGTAGCTTCACCTGCAACTCCTTCCAGGTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: WKRRTWRPRRRESTS*SSSSFTCNSFQVSP
Trigger: TGGGGAGACCTGGAAGGAGTTGCAGGTGAAGCTACTGGAGCTGCAGGAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CAATCGTCACACGCGCGCCCTTTCTTCTCCCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGGAGATCCTCACAGAGACCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: QSSHARPFFSPVPQA*HCTQERRSSQRPRR
Trigger: ACGCCTGGGTCTCTGTGAGGATCTCCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAGGGCGCGCGTGTGACGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CGGATGAAGAGGGGCACTCGCACATCCACCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGGGCATCCTGCTCTGCCGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: RMKRGTRTSTSSTPS*NSTMPRASCSAVTV
Trigger: CACTGTCACGGCAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGATGTGCGAGTGCCCCTCTTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GCTCCGAACTTGGGGTTGCTGAGTTGGACTTGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAGTCGACCTCCTGCAGCTCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: APNLGLLSWTWKRRT*RPRRRESTSCSSSS
Trigger: GCTACTGGAGCTGCAGGAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp AGCCTCCTGCTTCCAGGCGCTGGGTCCCCAGGGTTAGACCATCCATaGGGAAGGGCTCAGTCGTGGTGCTGTGCGTGCTGGTCACGCTGC +
Preference number: 5 (lower is better)
Translates to: SLLLPGAGSPGLDHP*GRAQSWCCACWSRC
Trigger: GCAGCGTGACCAGCACGCACAGCACCACGACTGAGCCCTTCCTCATGGATGGTCTAACCCTGGGGACCCAGCGCCTGGAAGCAGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp TGGCCGTTAAGGTCCGGGTCACGAATTCCTGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCAGGCGCTGGGTCCCCAGGGTTAGAC +
Preference number: 5 (lower is better)
Translates to: WPLRSGSRIPGSHAG*GSLLLPGAGSPGLD
Trigger: GTCTAACCCTGGGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATTCGTGACCCGGACCTTAACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TCCTGGGTCACATGCCGGGTGAGGGAGCCTCCTGCTTCCAGGCGCTaGGTCCCCAGGGTTAGACCATCCATGAGGAAGGGCTCAGTCGTG +
Preference number: 5 (lower is better)
Translates to: SWVTCRVREPPASRR*VPRVRPSMRKGSVV
Trigger: CACGACTGAGCCCTTCCTCATGGATGGTCTAACCCTGGGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GTGCTGAGAGAGCCACTGGCCGTTAAGGTCCGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGGGAGCCTCCTGCTTCCAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VLREPLAVKVRVTNS*VTCRVREPPASRRW
Trigger: CCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATTCGTGACCCGGACCTTAACGGCCAGTGGCTCTCTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATAC +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRPQPD*QALGRY
Trigger: GTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTTCAGCAGCATCTGCTaGGCGGAGCGGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGFSSIC*AERGAS
Trigger: GCTGGCGCCCCGCTCCGCCAAGCAGATGCTGCTGAA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TCCTCACCCGGCCGCAGCCGGACTTGCAGGCCTTGGGGAGATACCTaGCTGCGGTGCAGGCTGGTGTCGATCTGGGTGTTCTCTGTGATT +
Preference number: 5 (lower is better)
Translates to: SSPGRSRTCRPWGDT*LRCRLVSIWVFSVI
Trigger: AATCACAGAGAACACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TCACCTTCAAAGACGTGGGCCCCAGGGCAGAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCACAGCCCCACGGGAATCTGTACCCC +
Preference number: 5 (lower is better)
Translates to: SPSKTWAPGQRTPAE*VCQAHPQPHGNLYP
Trigger: GGGGTACAGATTCCCGTGGGGCTGTGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS CCA 90 bp TCACCTTCAAAGACGTGGGCCCCAGGGCAGAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCACAGCCCCACGGGAATCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SPSKTWAPGQRTPAE*VCQAHPQPHGNLGR
Trigger: CCTCCCAAGATTCCCGTGGGGCTGTGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCTCTGCCCTGGGGCCCACGTCTTTGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGCCTTCTTGCAGCGGTaGGCCAGGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVAFLQR*ARSPGR
Trigger: CCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATAC +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCRPQPD*QALGRY
Trigger: GTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp GCACAGCTCTTGTCCACCCGGATGCACTCGGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTGGCCAGGTCTCCAGGGAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: AQLLSTRMHSVQLFT*AFLQRLARSPGRLA
Trigger: TGCCAGCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTACCGAGTGCATCCGGGTGGACAAGAGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp GGCCGTTGCAGATGCCCCCGTTGCTATCGATGCAGGTGGCATTGCTaGGGGGACAGTCACAGCTGCGGCCTGTCCAACCAGGCTCACACA +
Preference number: 5 (lower is better)
Translates to: GRCRCPRCYRCRWHC*GDSHSCGLSNQAHT
Trigger: TGTGTGAGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGATAGCAACGGGGGCATCTGCAACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp TGGCCTCCACCAGCAGCTGCTTCTCATCATCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACATCCACCAGCTCCACGCCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: WPPPAAASHHHPQAG*RGALAHPPAPRPPG
Trigger: TCCAGGAGGGCGTGGAGCTGGTGGATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp GGCCGCAGCCGGACTTGCAGGCCTTGGGGAGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGGGTGTTCTCTGTGATTTCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRSRTCRPWGDTWLR*RLVSIWVFSVISRL
Trigger: CAGCCTTGAAATCACAGAGAACACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTGCCCAGCTGTGGGAAGGGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LCVLVTLLNSLCTGF*KSPEWLPSCGKGPP
Trigger: TGGAGGCCCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CGTGGTGCTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGAATGGCTGCCCAGCTGTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RGAVRAGHAAELALH*VLEEPRMAAQLWEG
Trigger: CCCTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVVAELD*EAADLA
Trigger: CGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAAC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGWCSS*GHLTGH
Trigger: GTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp GCGGAGCGGGGCGCCAGCAACACTGTGTCCACAATGGTGTGGTCTTaGTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AERGASNTVSTMVWS*FFPVLGCCRNFVCW
Trigger: CCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCCCGCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp AGGGTGGCAGTGCCCACAGGGACATCAATGGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCAGGCCGGATGAAGAGGGGCACTCGC +
Preference number: 5 (lower is better)
Translates to: RVAVPTGTSMASTSS*FSSSSSGRMKRGTR
Trigger: GCGAGTGCCCCTCTTCATCCGGCCTGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGGGCACTGCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp TCAGTCGTGGTGCTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTTaGACTGGGTTCTGGAAGAGCCCAGAATGGCTGCCCAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SVVVLCVLVTLLNSL*TGFWKSPEWLPSCG
Trigger: CCCACAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCACCACGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp ATGAGGATATACAGATCCACGGGGCTCTCCAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTTGC +
Preference number: 5 (lower is better)
Translates to: MRIYRSTGLSRGSNT*NTKLRSSPGRSRTC
Trigger: GCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCTGGAGAGCCCCGTGGATCTGTATATCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CCAGCACGTTGGCACCATCAGCCTCGTAGTGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGGTGCTGTCAGCCCTCCAGCCAATGT +
Preference number: 5 (lower is better)
Translates to: PARWHHQPRSGRQTR*RTPAGGCCQPSSQC
Trigger: ACATTGGCTGGAGGGCTGACAGCACCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCCACTACGAGGCTGATGGTGCCAACGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CCTCACCCTCACGCAGGCAGGGCTGTGTGTCACTCAGAGAGCCGGTaGAGCAGTTGCAGGTTTTGCCACTCCAGCCCTCATTGCACACAC +
Preference number: 5 (lower is better)
Translates to: PHPHAGRAVCHSESR*SSCRFCHSSPHCTH
Trigger: GTGTGTGCAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTCTCTGAGTGACACACAGCCCTGCCTGCGTGAGGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CTCGGTGGGACAGGTGTGGGCTCAGATGCGTGCCATAGGCCACATTaGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTGCCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: LGGTGVGSDACHRPH*LQSFCAGSWRCLDR
Trigger: CCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCCTATGGCACGCATCTGAGCCCACACCTGTCCCACCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CCGGGTAAGGGTGGAGGACGTGCTCAGCACTCGGTGGGACAGGTGTaGGCTCAGATGCGTGCCATAGGCCACATTGGCTGCAGTCATTCT +
Preference number: 5 (lower is better)
Translates to: PGKGGGRAQHSVGQV*AQMRAIGHIGCSHS
Trigger: AGAATGACTGCAGCCAATGTGGCCTATGGCACGCATCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCACGTCCTCCACCCTTACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GGCCACATTGGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GHIGCSHSVQGVGAA*IGKVHPAIHQVLSR
Trigger: CCGGGAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTCCTGTGTCTTGTATaGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVVLCLV*GVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGAC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGAGCCGGTGGAGCAGTaGCAGGTTTTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGEPVEQ*QVLPLQ
Trigger: CTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGQRPRS*HRNPEV
Trigger: GACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTACCAGGACTGTGCTGTaGGGCCCAGGGCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGATRTVL*GPGLPS
Trigger: CGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCTGTACCCCATTGGCTaGCCAGGAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALYPIG*PGGGSQ
Trigger: CTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGMDMGR*GCVARL
Trigger: CAACCTGGCTACACAGCCCAAGCGGCCCATGTCCAT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVMDMGR*GCVARL
Trigger: CAACCTGGCTACACAGCCCAAGCGGCCCATGTCCAT...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCCCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVPGLGM*SRCISP
Trigger: CGGCGAGATGCATCGGCTCAACATCCCTAACCCTGG...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGWCSS*GHLTGH
Trigger: GTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp TGTTGGGCCCAGGGCTGCCATCGCCCTCCACGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCCGGAAGGAGCAGTACTCCACCACCT +
Preference number: 5 (lower is better)
Translates to: CWAQGCHRPPRCSCK*SRHPHPGRSSTPPP
Trigger: AGGTGGTGGAGTACTGCTCCTTCCGGGATGAGGATGACGACTGCACTTACAGCTACAACGTGGAGGGCGATGGCAGCCCTGGGCCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp AGAAGGAGCCGGGAGGGCAGTCTTTCTTTTTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGCCATCGCCCTCCACGTTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: RRSREGSLSFCGPGL*CWAQGCHRPPRCSC
Trigger: ACAGCTACAACGTGGAGGGCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCCTCCCGGCTCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp AGGACGTGCTCAGCACTCGGTGGGACAGGTGTGGGCTCAGATGCGTaGCATAGGCCACATTGGCTGCAGTCATTCTGTGCAGGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: RTCSALGGTGVGSDA*HRPHWLQSFCAGSW
Trigger: CCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCCTATGGCACGCATCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCACGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TGCTTGGCGGAGCGGGGCGCCAGCAACACTGTGTCCACAATGGTGTaGTCTTGCTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTC +
Preference number: 5 (lower is better)
Translates to: CLAERGASNTVSTMV*SCFFPVLGCCRNFV
Trigger: GACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCCCGCTCCGCCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GCATCTGCTTGGCGGAGCGGGGCGCCAGCAACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCCCGGTGTTGGGCTGCTGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: ASAWRSGAPATLCPQ*CGLAFSRCWAAVGT
Trigger: AGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCCCGCTCCGCCAAGCAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TTACCAGACGGCGACCAAGGGTGGCAGTGCCCACAGGGACATCAATaGCCTCCACCAGCAGCTGCTTCTCATCATCATCCTCAGGCCGGA +
Preference number: 5 (lower is better)
Translates to: LPDGDQGWQCPQGHQ*PPPAAASHHHPQAG
Trigger: TCCGGCCTGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGGGCACTGCCACCCTTGGTCGCCGTCTGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CGGCCATTCACCAGGTGCTCAGTGTCATCAGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGCAGGACGTCATCACTGTACATAAGG +
Preference number: 5 (lower is better)
Translates to: RPFTRCSVSSETLGL*LLAGDRRTSSLYIR
Trigger: CCTTATGTACAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGAGCACCTGGTGAATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS CCA 90 bp TCCGTTTCATCGTGCTCACCGAGAATAACGGTGGTTGTGCTGGGCTaGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: SVSSCSPRITVVVLG*PRRAPNLGLLSWTW
Trigger: CCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGTTATTCTCGGTGAGCACGATGAAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS CCA 90 bp TCGAACTTCCAGCCGCAGCCAGTGTCATCAGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGCAGGACGTCATCACTGTACATAAGG +
Preference number: 5 (lower is better)
Translates to: SNFQPQPVSSETLGL*LLAGDRRTSSLYIR
Trigger: CCTTATGTACAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGGCTGCGGCTGGAAGTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATAC +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRPQPD*QALGRY
Trigger: GTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATAC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRPQPD*QALGRY
Trigger: GTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCQRPRS*HRNPEV
Trigger: GACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACT +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGRCTL*VIFQRT
Trigger: AGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTTCAGCAGCATCTGCTaGGCGGAGCGGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTFSSIC*AERGAS
Trigger: GCTGGCGCCCCGCTCCGCCAAGCAGATGCTGCTGAA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGLDPAA*ALGFCG
Trigger: CCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTTCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp GGGGATGATGTTATGCTTGGCAAGCAGGCGAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTTGTATTGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GDDVMLGKQANQRGH*WVVLCLVLGVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGACTACCCATCAGTGCCCACGCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp ATTATAGAGTCTGGTGAACCCCTGGATGCGGGCACACCCTTCATGTaGGCCCGGCTCAAGGACCCAAGAGTCCAGGACAGCGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: IIESGEPLDAGTPFM*ARLKDPRVQDSGSL
Trigger: CAGGCTTCCGCTGTCCTGGACTCTTGGGTCCTTGAGCCGGGCTCACATGAAGGGTGTGCCCGCATCCAGGGGTTCACCAGACTCTATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS CCA 90 bp TTGCCATTGTCCAGGATGTGCCGGATGACAGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAGTATTCAGGCTGCTCGAAGGACACT +
Preference number: 5 (lower is better)
Translates to: LPLSRMCRMTGMRAT*SPRLTEYSGCSKDT
Trigger: AGTGTCCTTCGAGCAGCCTGAATACTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGGACAATGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp AGACTCCTGTCCGTTTCATCGAGAATAACGGTGGTTGTGCTGGGCTaGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: RLLSVSSRITVVVLG*PRRAPNLGLLSWTW
Trigger: CCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGTTATTCTCGATGAAACGGACAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021107.14
ENSMUST00000169928.8
CDS CCA 90 bp GGCCACATTGGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GHIGCSHSVQGVGAA*IGKVHPAIHQVLSV
Trigger: GACACTGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGCCTTCTTGCAGCGGTaGGCCAGGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTAFLQR*ARSPGR
Trigger: CCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACACCAGGACTGTGCTGTaGGGCCCAGGGCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYTRTVL*GPGLPS
Trigger: CGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGVAELD*EAADLA
Trigger: CGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAAC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGAPNLG*LSWTWK
Trigger: CTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACCTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYLDPAA*ALGFCG
Trigger: CCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAG...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLDPAA*ALGFCG
Trigger: CCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp TGCTATAGGAGACCTGGGACTTGCCATTGTCCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCTGGTCTCCACGACTCACCGAGTATT +
Preference number: 5 (lower is better)
Translates to: CYRRPGTCHCPGCAG*QGCGPPGLHDSPSI
Trigger: AATACTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGGACAATGGCAAGTCCCAGGTCTCCTATAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp CATAGGCCACATTGGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: HRPHWLQSFCAGSWR*LDRQSPSGHSPGAQ
Trigger: CTGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS GCA 90 bp CATAGGCCACATTGGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCATCCGGCCATTCACCAGGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: HRPHWLQSFCAGSWR*LDRQSPSGHSPGAL
Trigger: GAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS CCA 90 bp CCCCATCCTGCCCCATTGCGCGCCTTAACCGTGTATCGGTATGGCTaGGATTCTCGCAGATTCTCAATGAGCAGCATCCGGTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PHPAPLRALTVYRYG*DSRRFSMSSIRFLG
Trigger: CCCCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATACCGATACACGGTTAAGGCGCGCAATGGGGCAGGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTTGCAGCGCCTCTCCTaGAACAGCTCGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGALQRLS*NSSSVQ
Trigger: CTGCACAGACGAGCTGTTCAAGGAGAGGCGCTGCAA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCTTCTGCCCCATCTGCTaGAGGTTGTCCAGATCGTCA +
Preference number: 5 (lower is better)
Translates to: FLDSTYPCSLTTGAGSVVFCPIC*RLSRSS
Trigger: TGACGATCTGGACAACCTCAAGCAGATGGGGCAGAA...GACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCCCGGAGATGCACATaGTATGTGCCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGARRCT*YVPTSP
Trigger: GGGGGAAGTGGGCACATACAATGTGCATCTCCGGGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCAGGACTGTGCTGTaGGGCCCAGGGCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCITRTVL*GPGLPS
Trigger: CGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTTCAGCAGCATCTGCTaGGCGGAGCGGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYFSSIC*AERGAS
Trigger: GCTGGCGCCCCGCTCCGCCAAGCAGATGCTGCTGAA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCAPNLG*LSWTWK
Trigger: CTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTGTACCCCATTGGCTaGCCAGGAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLYPIG*PGGGSQ
Trigger: CTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCTGTACCCCATTGGCTaGCCAGGAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCILYPIG*PGGGSQ
Trigger: CTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCTCACCCTGTACCCCATaGGCTTGCCAGGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTSPCTP*ACQEGA
Trigger: TGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGA...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGASTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSSIRF*GLSTST
Trigger: GGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp AGGAGCGGAGATCCTCACAGAGACCCAGGCGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCGTGTAGAGCGACTGCTGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: RSGDPHRDPGVSQSS*SHRWCPCRATAGCS
Trigger: ACTGCAACCAGCAGTCGCTCTACACGGACACCACCTGTGAGATCAACTACTCTGCGATACGCCTGGGTCTCTGTGAGGATCTCCGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp TGGGCTGCTGTCGGAACTTCGTCTGCTGGAGCTTGTGTGCGCCGCTaGCCTGTCTATACACCTCATTCAGATTTTCCTCCACCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: WAAVGTSSAGACVRR*PVYTPHSDFPPPPG
Trigger: GCCAGGAGGTGGAGGAAAATCTGAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp CCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTGCTGGAGCTTGTGTaGGCCGCTGACCTGTCTATACACCTCATTCAGATTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PGVGLLSELRLLELV*AADLSIHLIQIFLH
Trigger: GTGGAGGAAAATCTGAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp GGGATGCGGGCCACCTGGTCTCCACGACTCACCGAGTATTCAGGCTaGTCGAAGGACACTACCCCACTAGCTTGTTCCTTGATAATGGTG +
Preference number: 5 (lower is better)
Translates to: GMRATWSPRLTEYSG*SKDTTPLACSLIMV
Trigger: CACCATTATCAAGGAACAAGCTAGTGGGGTAGTGTCCTTCGAGCAGCCTGAATACTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TGGAGCGAATTCGATAGAAGGCCTCCTCCAGCAGCTCCACGATGTTaGATGAATCCTCCTGCAGGACGCCCAGAGAGGAGACGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: WSEFDRRPPPAAPRC*MNPPAGRPERRRGN
Trigger: ATTTCCCCGTCTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCTGGAGGAGGCCTTCTATCGAATTCGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GAGGGTTTCAGGTGGATGTTGCCCCCTTGGTCTTCTTTAGCCAGCTaGCACACATGTGTCCCATCTATGTCCTCCACTGCCCGGAGATGC +
Preference number: 5 (lower is better)
Translates to: EGFRWMLPPWSSLAS*HTCVPSMSSTARRC
Trigger: GCATCTCCGGGCAGTGGAGGACATAGATGGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GGGTCCCCATCCTGCCCCATTGCGCGCCTTAACCGTGTATCGGTATaGCTGGGATTCTCGCAGATTCTCAATGAGCAGCATCCGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GSPSCPIARLNRVSV*LGFSQILNEQHPVL
Trigger: AAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATACCGATACACGGTTAAGGCGCGCAATGGGGCAGGATGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGCCTTCTTGCAGCGGTaGGCCAGGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPAFLQR*ARSPGR
Trigger: CCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGCCTTCTTGCAGCGGTaGGCCAGGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYAFLQR*ARSPGR
Trigger: CCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATAC +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARPQPD*QALGRY
Trigger: GTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGTCCTGTGTCTTGTATaGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTVLCLV*GVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGAC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGTCCTGTGTCTTGTATaGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTVLCLV*GVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGAC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGCCCGGAGATGCACATaGTATGTGCCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTARRCT*YVPTSP
Trigger: GGGGGAAGTGGGCACATACAATGTGCATCTCCGGGC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGCCCGGAGATGCACATaGTATGTGCCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTARRCT*YVPTSP
Trigger: GGGGGAAGTGGGCACATACAATGTGCATCTCCGGGC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGCCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTQRPRS*HRNPEV
Trigger: GACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATACCAGGACTGTGCTGTaGGGCCCAGGGCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYTRTVL*GPGLPS
Trigger: CGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: MVPGQHLPLLSDYRGWLCGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...ACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTTCAGCAGCATCTGCTaGGCGGAGCGGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWFSSIC*AERGAS
Trigger: GCTGGCGCCCCGCTCCGCCAAGCAGATGCTGCTGAA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGTACCCCATTGGCTaGCCAGGAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLYPIG*PGGGSQ
Trigger: CTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTGTACCCCATTGGCTaGCCAGGAGGGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYLYPIG*PGGGSQ
Trigger: CTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCTCACCCTGTACCCCATaGGCTTGCCAGGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISPCTP*ACQEGA
Trigger: TGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGA...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTATCCGGTTCTTGGGGTaGTCCACGAGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAIRFLG*STSTFF
Trigger: GAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGAT...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSSIRF*GLSTST
Trigger: GGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYSSIRF*GLSTST
Trigger: GGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYMDMGR*GCVARL
Trigger: CAACCTGGCTACACAGCCCAAGCGGCCCATGTCCAT...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTMDMGR*GCVARL
Trigger: CAACCTGGCTACACAGCCCAAGCGGCCCATGTCCAT...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTTACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAYHHRG*ARVRDV
Trigger: AACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTA...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGWCSS*GHLTGH
Trigger: GTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPNRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp GGGGCGCCCAGGTCTCCATGGGGTGGCGGAGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCCGTTTCATCGTGCTCACCGAGAATA +
Preference number: 5 (lower is better)
Translates to: GAPRSPWGGGGDESV*FMRLLSVSSCSPRI
Trigger: TATTCTCGGTGAGCACGATGAAACGGACAGGAGTCTCATAAATCAAACACTTTCATCGCCTCCGCCACCCCATGGAGACCTGGGCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS GCA 90 bp AGTCTTTCTTTTTGTGGACCAGGACTGTGCTGTTGGGCCCAGGGCTaGCATCGCCCTCCACGTTGTAGCTGTAAGTGCAGTCGTCATCCT +
Preference number: 5 (lower is better)
Translates to: SLSFCGPGLCCWAQG*HRPPRCSCKCSRHP
Trigger: AGGATGACGACTGCACTTACAGCTACAACGTGGAGGGCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACAAAAAGAAAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp TGGTCTTGCTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCGCTGACCTGTCTATACACCTCATTC +
Preference number: 5 (lower is better)
Translates to: WSCFFPVLGCCRNFV*WSLCAPLTCLYTSF
Trigger: GAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp CGGAGGCCATCAGAGAAGGAGGGTTTCAGGTGGATGTTGCCCCCTTaGTCTTCTTTAGCCAGCTGGCACACATGTGTCCCATCTATGTCC +
Preference number: 5 (lower is better)
Translates to: RRPSEKEGFRWMLPP*SSLASWHTCVPSMS
Trigger: GGACATAGATGGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGATGGCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp TACAGGTTGGTGAGTTCCACTGAGGGCACCTTGCTGTCTAGAAGGTaGGCTTCAGACTCAGAGTCGCCCTGGATCCAGTACTTCACCCTG +
Preference number: 5 (lower is better)
Translates to: YRLVSSTEGTLLSRR*ASDSESPWIQYFTL
Trigger: CAGGGTGAAGTACTGGATCCAGGGCGACTCTGAGTCTGAAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGAACTCACCAACCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCCTTCTTGCAGCGGTaGGCCAGGTCTCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLAFLQR*ARSPGR
Trigger: CCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYSSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYSWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGAGCCGGTGGAGCAGTaGCAGGTTTTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIEPVEQ*QVLPLQ
Trigger: CTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIQRPRS*HRNPEV
Trigger: GACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPQRPRS*HRNPEV
Trigger: GACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCG +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGSSSTI*TLKGQS
Trigger: CGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCT...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAACCAGGACTGTGCTGTaGGGCCCAGGGCTGCCATCG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTATRTVL*GPGLPS
Trigger: CGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGAPNLG*LSWTWK
Trigger: CTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACT +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIRRAPN*GLLSWT
Trigger: AGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTALDPAA*ALGFCG
Trigger: CCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCCTGTACCCCATaGGCTTGCCAGGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSPCTP*ACQEGA
Trigger: TGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACTCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYSTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGTACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGYHHRG*ARVRDV
Trigger: AACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTA...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYNRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp GGGGCGCCCAGGTCTCCATGGGGTGGCGGAGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCCGTTTCATCGAGAATAACGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GAPRSPWGGGGDESV*FMRLLSVSSRITVV
Trigger: AACCACCGTTATTCTCGATGAAACGGACAGGAGTCTCATAAATCAAACACTTTCATCGCCTCCGCCACCCCATGGAGACCTGGGCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021107.14
ENSMUST00000169928.8
CDS GCA 90 bp CCACAGGGACATAATCCCGGTGTCCGTGTGCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACTTGCCATTGTCCAGGATGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: PQGHNPGVRVLYYPV*YRRPGTCHCPGCAG
Trigger: TCCGGCACATCCTGGACAATGGCAAGTCCCAGGTCTCCTATAGCACACAGGATAATACAGCACACGGACACCGGGATTATGTCCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTTGCAGCGCCTCTCCTaGAACAGCTCGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPLQRLS*NSSSVQ
Trigger: CTGCACAGACGAGCTGTTCAAGGAGAGGCGCTGCAA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGCTCCGCCTGGGTGTaGCAGCGCCTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSSAWV*QRLSLN
Trigger: GTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAGCTGGCGCAGGATCTaGGCCAGGTTCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTASWRRI*ARFCPI
Trigger: GATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTGGCTCTGTGGTCGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: VPGQHLPLLSDYRGWLCGRSPCS*FQNSST
Trigger: TGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACG...ACCACAGAGCCAGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTSSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGTCCTGTGTCTTGTATaGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYVLCLV*GVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGAC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGGGATGATGTTATGCTaGGCAAGCAGGCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTGMMLC*ASRRTS
Trigger: GCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGCCCGGAGATGCACATaGTATGTGCCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYARRCT*YVPTSP
Trigger: GGGGGAAGTGGGCACATACAATGTGCATCTCCGGGC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVAELD*EAADLA
Trigger: CGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTAPNLG*LSWTWK
Trigger: CTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQLDPAA*ALGFCG
Trigger: CCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTCACCCTGTACCCCATaGGCTTGCCAGGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSPCTP*ACQEGA
Trigger: TGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTCACCCTGTACCCCATaGGCTTGCCAGGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSPCTP*ACQEGA
Trigger: TGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGA...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCATCCGGTTCTTGGGGTaGTCCACGAGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTIRFLG*STSTFF
Trigger: GAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGAT...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSSIRF*GLSTST
Trigger: GGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCT...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSSIRF*GLSTST
Trigger: GGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: TSTHFMVPGQHLPLLSDYGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...GTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCG +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPPGLGM*SRCISP
Trigger: CGGCGAGATGCATCGGCTCAACATCCCTAACCCTGG...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFGWCSS*GHLTGH
Trigger: GTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCAC +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGWCSS*GHLTGH
Trigger: GTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFNRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWNRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTANRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLNRLSG*SPSTRK
Trigger: CTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp CCCTCATTGCACACACAGTGTCCACACATGAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACTTCCTTTTGCAGCTCACAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: PSLHTQCPHMKSPLK*QRADRTSFCSSQGH
Trigger: GTGCCCCTGTGAGCTGCAAAAGGAAGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTTCATGTGTGGACACTGTGTGTGCAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTTGCAGCGCCTCTCCTaGAACAGCTCGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPLQRLS*NSSSVQ
Trigger: CTGCACAGACGAGCTGTTCAAGGAGAGGCGCTGCAA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACATTCTGCCCCATCTGCTaGAGGTTGTCCAGATCGTCA +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTFCPIC*RLSRSS
Trigger: TGACGATCTGGACAACCTCAAGCAGATGGGGCAGAA...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPSSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGTCCTGTGTCTTGTATaGGGTGTAGGCGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLVLCLV*GVGARG
Trigger: GCCTCGGGCGCCTACACCCAATACAAGACACAGGAC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCAGCAGCTCCACGATGTaGGATGAATCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCISSSTM*DESSCR
Trigger: CCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCT...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGCCCGGAGATGCACATaGTATGTGCCCACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFARRCT*YVPTSP
Trigger: GGGGGAAGTGGGCACATACAATGTGCATCTCCGGGC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCGAGCCGGTGGAGCAGTaGCAGGTTTTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFEPVEQ*QVLPLQ
Trigger: CTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTC...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGAGCCGGTGGAGCAGTaGCAGGTTTTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAEPVEQ*QVLPLQ
Trigger: CTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGCCGGTGGAGCAGTaGCAGGTTTTGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLEPVEQ*QVLPLQ
Trigger: CTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACT +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVGRCTL*VIFQRT
Trigger: AGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACT +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGRCTL*VIFQRT
Trigger: AGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQVAELD*EAADLA
Trigger: CGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAAC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFLGVAE*DLEAAD
Trigger: GTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTCCACTGAGGGCACCTaGCTGTCTAGAAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPSTEGT*LSRRWA
Trigger: AGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PLPTLWFLDSTYPCSLTTVEETT*KASLPG
Trigger: GCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTAC...TGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTATCCGGTTCTTGGGGTaGTCCACGAGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPIRFLG*STSTFF
Trigger: GAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGAT...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGCCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLPGLGM*SRCISP
Trigger: CGGCGAGATGCATCGGCTCAACATCCCTAACCCTGG...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPGLGM*SRCISP
Trigger: CGGCGAGATGCATCGGCTCAACATCCCTAACCCTGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp AGGGCTCCTTCAGTTTCTCGGGCCTCATGTCTGTCTGTGGGACGCTaGCTTTGTCCACAAACTTTCCAAATCCAATGGTGTAGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: RAPSVSRASCLSVGR*LCPQTFQIQWCSRW
Trigger: CCAGCGACTACACCATTGGATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAGACATGAGGCCCGAGAAACTGAAGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 90 bp AGGCACACACCTTCATTTCGTAGTCGCAATAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCTTGCTGTCTAGAAGGTGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RHTPSFRSRNRDTGW*VPLRAPCCLEGGLQ
Trigger: CTGAAGCCCACCTTCTAGACAGCAAGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCTATTGCGACTACGAAATGAAGGTGTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 90 bp GTTGGGCCAGGGCTCCTTCAGTTTCTCGGGCCTCATGTCTGTCTGTaGGACGCTGACTTTGTCCACAAACTTTCCAAATCCAATGGTGTA +
Preference number: 5 (lower is better)
Translates to: VGPGLLQFLGPHVCL*DADFVHKLSKSNGV
Trigger: TACACCATTGGATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACAGACAGACATGAGGCCCGAGAAACTGAAGGAGCCCTGGCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTTGCAGCGCCTCTCCTaGAACAGCTCGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLLQRLS*NSSSVQ
Trigger: CTGCACAGACGAGCTGTTCAAGGAGAGGCGCTGCAA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTTTCTGCCCCATCTGCTaGAGGTTGTCCAGATCGTCA +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPFCPIC*RLSRSS
Trigger: TGACGATCTGGACAACCTCAAGCAGATGGGGCAGAA...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGATGATGTTATGCTaGGCAAGCAGGCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGMMLC*ASRRTS
Trigger: GCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGGGATGATGTTATGCTaGGCAAGCAGGCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPGMMLC*ASRRTS
Trigger: GCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAAGCAGCTCCACGATGTaGGATGAATCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVSSSTM*DESSCR
Trigger: CCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCT...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CTACCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCG +
Preference number: 5 (lower is better)
Translates to: LPTLWFLDSTYPCSLTTGSSSTI*TLKGQS
Trigger: CGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCT...CCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACT +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGRCTL*VIFQRT
Trigger: AGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIVEETT*KASLPG
Trigger: GCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTAC...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQMDMGR*GCVARL
Trigger: CAACCTGGCTACACAGCCCAAGCGGCCCATGTCCAT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVYHHRG*ARVRDV
Trigger: AACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTA...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTTCTGCCCCATCTGCTaGAGGTTGTCCAGATCGTCA +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYFCPIC*RLSRSS
Trigger: TGACGATCTGGACAACCTCAAGCAGATGGGGCAGAA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTASSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGGATGATGTTATGCTaGGCAAGCAGGCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGMMLC*ASRRTS
Trigger: GCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCAGCAGCTCCACGATGTaGGATGAATCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSSSTM*DESSCR
Trigger: CCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGCAGCTCCACGATGTaGGATGAATCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSSSTM*DESSCR
Trigger: CCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCCACTCCAGCCCTCATaGCACACACAGTGTCCACAC +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQPLQPS*HTQCPH
Trigger: GTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGG...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAEQLQV*PLQPSL
Trigger: CAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACT +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGRCTL*VIFQRT
Trigger: AGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp CCCACTTTATGGTTCCTGGACAGCACCTACCCCTGCTCTCTGACTACAGGGGCTCCACTAGCTTGTTCCTaGATAATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: PTLWFLDSTYPCSLTTGAPLACS*IMVMFT
Trigger: GGTAAACATCACCATTATCAAGGAACAAGCTAGTGG...AGCCCCTGTAGTCAGAGAGCAGGGGTAGGTGCTGTCCAGGAACCATAAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTAGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVVEETT*KASLPG
Trigger: GCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTAC...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPVEETT*KASLPG
Trigger: GCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTAC...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCATCCGGTTCTTGGGGTaGTCCACGAGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFIRFLG*STSTFF
Trigger: GAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGAT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGCVAR*MIASLS
Trigger: CGAGAGAGAGGCTATCATCAACCTGGCTACACAGCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLYHHRG*ARVRDV
Trigger: AACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 90 bp AAGCCCCCTTCAGGAGCGTCCAGGTTGCCTGAGATGCGTTCTCCTTaGAGTTTGTTCCAGAATTCTTCCACATTCTCCGTTAAGCTGATA +
Preference number: 5 (lower is better)
Translates to: KPPSGASRLPEMRSP*SLFQNSSTFSVKLI
Trigger: TATCAGCTTAACGGAGAATGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGGGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCTTCTGCCCCATCTGCTaGAGGTTGTCCAGATCGTCA +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFFCPIC*RLSRSS
Trigger: TGACGATCTGGACAACCTCAAGCAGATGGGGCAGAA...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTCCAGCCAATGTCCCTaGTGCACACAGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSSQCP*CTQLSA
Trigger: TGCAGACAGCTGTGTGCACAAGGGACATTGGCTGGA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGGGATGATGTTATGCTaGGCAAGCAGGCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQGMMLC*ASRRTS
Trigger: GCTGGTTCGCCTGCTTGCCAAGCATAACATCATCCC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGAGCAGCTCCACGATGTaGGATGAATCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQSSSTM*DESSCR
Trigger: CCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCT...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCAGGGCAGTCTTTCTTTTaGTGGACCAGGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAGQSFF*WTRTVL
Trigger: CAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCC...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQAPNLG*LSWTWK
Trigger: CTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGC...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWVEETT*KASLPG
Trigger: GCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTAC...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: TCGIGPRVGCSQKDLVSPRSPCS*FQNSST
Trigger: TGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACG...AGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCCACTAGCTTGTTCCTaGATAATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: WDWTQGGMQSERPCITSTPLACS*IMVMFT
Trigger: GGTAAACATCACCATTATCAAGGAACAAGCTAGTGG...GGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCTACCCTGTGGGACGCTGACTTaGTCCACAAACTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: ERPCITSTHFMVPGQHLPCGTLT*STNFPN
Trigger: ATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACA...GGGTAGGTGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATTGTGGGACGCTGACTTaGTCCACAAACTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: WLHVGLDPGWDAVRKTLYCGTLT*STNFPN
Trigger: ATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACA...ATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVRSPCS*FQNSST
Trigger: TGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp AGGGTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCG +
Preference number: 5 (lower is better)
Translates to: RVGCSQKDLVSPLPTLWFSSSTI*TLKGQS
Trigger: CGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCT...GAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCG +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLSSSTI*TLKGQS
Trigger: CGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCT...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCG +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWSSSTI*TLKGQS
Trigger: CGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCT...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTATCCCACTAGCTTGTTCCTaGATAATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: GYMWDWTQGGMQSERPCIPLACS*IMVMFT
Trigger: GGTAAACATCACCATTATCAAGGAACAAGCTAGTGG...GATACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GTGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGTGTGGGACGCTGACTTaGTCCACAAACTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: VGCSQKDLVSPLPTLWFLCGTLT*STNFPN
Trigger: ATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACA...CAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCATGTGGGACGCTGACTTaGTCCACAAACTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTACGTLT*STNFPN
Trigger: ATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACA...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTARSPCS*FQNSST
Trigger: TGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TGGGATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGCGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: WDAVRKTLYHLYPLYGSWRSPCS*FQNSST
Trigger: TGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACG...CCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp TTGGTTACATGTGGGATTGGACCCAGGGTGGGATGCAGTCAGAAAGACCTTGTACCACTAGCTTGTTCCTaGATAATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: LVTCGIGPRVGCSQKDLVPLACS*IMVMFT
Trigger: GGTAAACATCACCATTATCAAGGAACAAGCTAGTGG...TACAAGGTCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp ATGCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGTGTGGGACGCTGACTTaGTCCACAAACTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: MQSERPCITSTHFMVPGQCGTLT*STNFPN
Trigger: ATTTGGAAAGTTTGTGGACAAAGTCAGCGTCCCACA...CTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS-3UTR CAA 90 bp GCAGTCAGAAAGACCTTGTATCACCTCTACCCACTTTATGGTTCCTGGACAGCACCACTAGCTTGTTCCTaGATAATGGTGATGTTTACC +
Preference number: 5 (lower is better)
Translates to: AVRKTLYHLYPLYGSWTAPLACS*IMVMFT
Trigger: GGTAAACATCACCATTATCAAGGAACAAGCTAGTGG...TGCTGTCCAGGAACCATAAAGTGGGTAGAGGTGATACAAGGTCTTTCTGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGGACAGCCCGTAGGGTACGAGCTCCGTGGGGCTGGTaGTGGCGGCATGGGTGGCAAAGCCAGGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: GTARRVRAPWGW*WRHGWQSQGAA
Trigger: TGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCGTACCCTACGGGCTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CGCTCCTCACCCGGCCGCAGCCGGACTTGCAGGCCTTaGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTCG +
Preference number: 6 (lower is better)
Translates to: RSSPGRSRTCRP*GDTWLRCRLVS
Trigger: CGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GCGCTCCTCACCCGGCCGCAGCCGGACTTGCAGGCCTaGGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: ALLTRPQPDLQA*GRYLAAVQAGV
Trigger: GACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAGTCGACCTC +
Preference number: 6 (lower is better)
Translates to: GLAQAGSELGVAELD*EAADLAATQEGVDL
Trigger: GAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TGTGCTGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTaGGACTTGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAGTC +
Preference number: 6 (lower is better)
Translates to: CAGLAQAGSELGVAE*DLEAADLAATQEGV
Trigger: GACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp ACGGTGGTTGTGCTGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAGCGGCGGACCTGGCGGCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: TVVVLGWPRRAPNLG*LSWTWKRRTWRPRR
Trigger: CCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTaGGTTGGACTTGGAAGCGGCGGACCTGGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: WAGPGGLRTWGC*VGLGSGGPGGH
Trigger: GTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CAAGGCGCAGGGACAGCCCGTAGGGTACGAGCTCCGTaGGGCTGGTGCTGGCGGCATGGGTGGCAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: QGAGTARRVRAP*GWCWRHGWQSQ
Trigger: CTGGCTTTGCCACCCATGCCGCCAGCACCAGCCCCACGGAGCTCGTACCCTACGGGCTGTCCCTGCGCCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TGGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTaGACTTGGAAGCGGCGGACCTGGCGGCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: WPRRAPNLGLLS*TWKRRTWRPRR
Trigger: CCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGCTGGGCTGGCCCAGGCGGGCTCCGAACTTGGGGTaGCTGAGTTGGACTTGGAAGCGGCGGACCTGGCGG +
Preference number: 6 (lower is better)
Translates to: VLGWPRRAPNLG*LSWTWKRRTWR
Trigger: CCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp AGGGGCACTCGCACATCCACCAGCTCCACGCCCTCCTaGAACTCCACCATGCCCCGGGCATCCTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RGTRTSTSSTPS*NSTMPRASCSA
Trigger: GGCAGAGCAGGATGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCTGGTGGATGTGCGAGTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp AGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTTaGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RRAPNLGLLSWT*KRRTWRPRRRE
Trigger: CTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATACCTGGCTGCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: HKAALLTRPQPD*QALGRYLAAVQ
Trigger: CTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CGTCCGCACTGGCACTCGCCGTGGCCCGAGCACGGTTaGTCCTCACCCTCACGCAGGCAGGGCTGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: RPHWHSPWPEHG*SSPSRRQGCVS
Trigger: TGACACACAGCCCTGCCTGCGTGAGGGTGAGGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTGCGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CAGGCGGGCTCCGAACTTGGGGTTGCTGAGTTGGACTaGGAAGCGGCGGACCTGGCGGCCACGCAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: QAGSELGVAELD*EAADLAATQEG
Trigger: TCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTTGCAGGCCTaGGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTCGATCTGGGT +
Preference number: 6 (lower is better)
Translates to: HKAALLTRPQPDLQA*GRYLAAVQAGVDLG
Trigger: ACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CACCTGGAACACAAAGCTGCGCTCCTCACCCGGCCGCAGCCGGACTaGCAGGCCTTGGGGAGATACCTGGCTGCGGTGCAGGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: HLEHKAALLTRPQPD*QALGRYLAAVQAGV
Trigger: GACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGCGGCCGGGTGAGGAGCGCAGCTTTGTGTTCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp AGGTCCGGGTCACGAATTCCTGGGTCACATGCCGGGTaGGGGAGCCTCCTGCTTCCAGGCGCTGGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: RSGSRIPGSHAG*GSLLLPGAGSP
Trigger: TGGGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATTCGTGACCCGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGCAATCGTCACACGCGCGCCCTTTCTTCTCCCCGGTaGCCCAGGCCTGGCACTGTACGCAGGAGCGGAGAT +
Preference number: 6 (lower is better)
Translates to: GNRHTRALSSPR*PRPGTVRRSGD
Trigger: ATCTCCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAGGGCGCGCGTGTGACGATTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CACGCGCGCCCTTTCTTCTCCCCGGTGCCCCAGGCCTaGCACTGTACGCAGGAGCGGAGATCCTCACAGAGA +
Preference number: 6 (lower is better)
Translates to: HARPFFSPVPQA*HCTQERRSSQR
Trigger: TCTCTGTGAGGATCTCCGCTCCTGCGTACAGTGCCAGGCCTGGGGCACCGGGGAGAAGAAAGGGCGCGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TTGGGGTTGCTGAGTTGGACTTGGAAGCGGCGGACCTaGCGGCCACGCAGGAGGGAGTCGACCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LGLLSWTWKRRT*RPRRRESTSCS
Trigger: GCTGCAGGAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGGTTGTGCTGGGCTGGCCCAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACTTGGAAGCGGCGGACC +
Preference number: 6 (lower is better)
Translates to: VVVLGWPRRAPN*GLLSWTWKRRT
Trigger: GGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CACACACAGCGTCCGCACTGGCACTCGCCGTGGCCCGAGCACGGTTaGTCCTCACCCTCACGCAGGCAGGGCTGTGTGTCACTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: HTQRPHWHSPWPEHG*SSPSRRQGCVSLRE
Trigger: CTCTCTGAGTGACACACAGCCCTGCCTGCGTGAGGGTGAGGACAAACCGTGCTCGGGCCACGGCGAGTGCCAGTGCGGACGCTGTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CGGACCTGGCGGCCACGCAGGAGGGAGTCGACCTCCTaGAGCTCCAGTAGCTTCACCTGCAACTCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: RTWRPRRRESTS*SSSSFTCNSFQ
Trigger: CTGGAAGGAGTTGCAGGTGAAGCTACTGGAGCTGCAGGAGGTCGACTCCCTCCTGCGTGGCCGCCAGGTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp AAGACGTGGGCCCCAGGGCAGAGAACACCAGCCGAGTaGGTGTGTCAGGCACACCCACAGCCCCACGGGAAT +
Preference number: 6 (lower is better)
Translates to: KTWAPGQRTPAE*VCQAHPQPHGN
Trigger: ATTCCCGTGGGGCTGTGGGTGTGCCTGACACACCCACTCGGCTGGTGTTCTCTGCCCTGGGGCCCACGTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp ACATGCCGGGTGAGGGAGCCTCCTGCTTCCAGGCGCTaGGTCCCCAGGGTTAGACCATCCATGAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TCRVREPPASRR*VPRVRPSMRKG
Trigger: GCCCTTCCTCATGGATGGTCTAACCCTGGGGACCCAGCGCCTGGAAGCAGGAGGCTCCCTCACCCGGCATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CAGCCGCAGCCAGTGTCATCAGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGCAGGACGTCATCACTG +
Preference number: 6 (lower is better)
Translates to: QPQPVSSETLGL*LLAGDRRTSSL
Trigger: CAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGGCTGCGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS CAA 90 bp AGAATAACGGTGGTTGTGCTGGGCTGGCCCAGGCGGGCTCCGAACTaGGGGTTGCTGAGTTGGACTTGGAAGCGGCGGACCTGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: RITVVVLGWPRRAPN*GLLSWTWKRRTWRP
Trigger: TGGCCGCCAGGTCCGCCGCTTCCAAGTCCAACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGTTATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp CTTCCAGGCGCTGGGTCCCCAGGGTTAGACCATCCATaGGGAAGGGCTCAGTCGTGGTGCTGTGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPGAGSPGLDHP*GRAQSWCCACW
Trigger: CCAGCACGCACAGCACCACGACTGAGCCCTTCCTCATGGATGGTCTAACCCTGGGGACCCAGCGCCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GCAGCCGGACTTGCAGGCCTTGGGGAGATACCTGGCTaGGGTGCAGGCTGGTGTCGATCTGGGTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: AAGLAGLGEIPG*GAGWCRSGCSL
Trigger: CAGAGAACACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TACAGATCCACGGGGCTCTCCAGGGGCTCAAACACCTaGAACACAAAGCTGCGCTCCTCACCCGGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: YRSTGLSRGSNT*NTKLRSSPGRS
Trigger: GCTGCGGCCGGGTGAGGAGCGCAGCTTTGTGTTCCAGGTGTTTGAGCCCCTGGAGAGCCCCGTGGATCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GGTGGAGGACGTGCTCAGCACTCGGTGGGACAGGTGTaGGCTCAGATGCGTGCCATAGGCCACATTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGRAQHSVGQV*AQMRAIGHIGC
Trigger: GCAGCCAATGTGGCCTATGGCACGCATCTGAGCCCACACCTGTCCCACCGAGTGCTGAGCACGTCCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GAGCCACTGGCCGTTAAGGTCCGGGTCACGAATTCCTaGGTCACATGCCGGGTGAGGGAGCCTCCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: EPLAVKVRVTNS*VTCRVREPPAS
Trigger: GGAAGCAGGAGGCTCCCTCACCCGGCATGTGACCCAGGAATTCGTGACCCGGACCTTAACGGCCAGTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CCTCGGCCGTTGCAGATGCCCCCGTTGCTATCGATGCAGGTGGCATaGCTGAGGGGACAGTCACAGCTGCGGCCTGTCCAACCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: PRPLQMPPLLSMQVA*LRGQSQLRPVQPGS
Trigger: TGAGCCTGGTTGGACAGGCCGCAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGATAGCAACGGGGGCATCTGCAACGGCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CTGGTGCTGGCGGCATGGGTGGCAAAGCCAGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACTGTGTCTCGTCCCTTGAGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: LVLAAWVAKPGRCTL*VIFQRTVSRPLRFP
Trigger: CGGGAACCTCAAGGGACGAGACACAGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GGGCTGGTGCTGGCGGCATGGGTGGCAAAGCCAGGGCGCTGCACATaGTTGGTGATCTTCCAGCGGACTGTGTCTCGTCCCTTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: GLVLAAWVAKPGRCT*LVIFQRTVSRPLRF
Trigger: GAACCTCAAGGGACGAGACACAGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAGCACCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GGAACGTTCTCACTGAGGCCAGGTACAGTCAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAGGTCCTGGCTGGTGCTCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: GTFSLRPGTVNRLSG*SPSTRKVLAGAPPW
Trigger: CCAAGGAGGAGCACCAGCCAGGACCTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTTGACTGTACCTGGCCTCAGTGAGAACGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGATGCACTCGGTACAGCTCTTCACCTGAGCCTTCTTaGAGCGGTTGGCCAGGTCTCCAGGGAGGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: GCTRYSSSPEPS*SGWPGLQGGWH
Trigger: GTGCCAGCCTCCCTGGAGACCTGGCCAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTACCGAGTGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CGGGAGGGCAGTCTTTCTTTTTGTGGACCAGGACTGTaGTGTTGGGCCCAGGGCTGCCATCGCCCTCCACGT +
Preference number: 6 (lower is better)
Translates to: REGSLSFCGPGL*CWAQGCHRPPR
Trigger: ACGTGGAGGGCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCCCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CGCAGCCAGTGTCATCAGAAACGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGACGTCATCACTGTACA +
Preference number: 6 (lower is better)
Translates to: RSQCHQKRWASG*WLGTAGRHHCT
Trigger: TGTACAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106458.2
ENSMUST00000106461.8
CDS CCA 72 bp TGGCACCATCAGCCTCGTAGTGGAAGGCAGACTCGGTaGAGAACACCAGCAGGTGGGTGCTGTCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: WHHQPRSGRQTR*RTPAGGCCQPS
Trigger: GGAGGGCTGACAGCACCCACCTGCTGGTGTTCTCCACCGAGTCTGCCTTCCACTACGAGGCTGATGGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GGCCTCTGGGGCTGTCCAGAGCCCGGATGTCCAGGTTaGAGCGAATTCGATAGAAGGCCTCCTCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GLWGCPEPGCPG*SEFDRRPPPAA
Trigger: AGCTGCTGGAGGAGGCCTTCTATCGAATTCGCTCCAACCTGGACATCCGGGCTCTGGACAGCCCCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TCCAGGATGTGCCGGATGACAGGGATGCGGGCCACCTaGTCTCCACGACTCACCGAGTATTCAGGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SRMCRMTGMRAT*SPRLTEYSGCS
Trigger: CGAGCAGCCTGAATACTCGGTGAGTCGTGGAGACCAGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp ACCAGGTGCTCAGTGTCATCAGAAACGCTGGGCCTCTaGCTGCTGGCTGGGGACCGCAGGACGTCATCACTG +
Preference number: 6 (lower is better)
Translates to: TRCSVSSETLGL*LLAGDRRTSSL
Trigger: CAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGAGCACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS CCA 72 bp TCGTGCTCACCGAGAATAACGGTGGTTGTGCTGGGCTaGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: SCSPRITVVVLG*PRRAPNLGLLS
Trigger: ACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGTTATTCTCGGTGAGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS CAA 72 bp CTGGCGGCATGGGTGGCAAAGCCAGGGCGCTGCACATaGTTGGTGATCTTCCAGCGGACTGTGTCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: LAAWVAKPGRCT*LVIFQRTVSRP
Trigger: GGGACGAGACACAGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGCCACCCATGCCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GGGATGGACATGGGCCGCTTGGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCGGGTCCCCATCCTGCC +
Preference number: 6 (lower is better)
Translates to: GMDMGRLGCVAR*MIASLSGPHPA
Trigger: GGCAGGATGGGGACCCGAGAGAGAGGCTATCATCAACCTGGCTACACAGCCCAAGCGGCCCATGTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp TCACTGAGGCCAGGTACAGTCAACCGGCTCTCAGGGTaGTCTCCGTCCACCCGGAAGGTCCTGGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SLRPGTVNRLSG*SPSTRKVLAGA
Trigger: AGCACCAGCCAGGACCTTCCGGGTGGACGGAGACAACCCTGAGAGCCGGTTGACTGTACCTGGCCTCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GGCGGAGCGGGGCGCCAGCAACACTGTGTCCACAATGGTGTGGTCTaGCTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: GGAGRQQHCVHNGVV*LFPGVGLLSELRLL
Trigger: CAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCCCGCTCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GCTGGCTCTGCCCAGCTCAGCTGCGTCACCGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGCTCGCTGGGTACTTCCTGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AGSAQLSCVTVEETT*KASLPGSLGTSWWV
Trigger: CACCCACCAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTACGGTGACGCAGCTGAGCTGGGCAGAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GGGATGATAGGGATGGACATGGGCCGCTTGGGCTGTGTAGCCAGGTaGATGATAGCCTCTCTCTCGGGTCCCCATCCTGCCCCATTGCGC +
Preference number: 6 (lower is better)
Translates to: GMIGMDMGRLGCVAR*MIASLSGPHPAPLR
Trigger: GCGCAATGGGGCAGGATGGGGACCCGAGAGAGAGGCTATCATCAACCTGGCTACACAGCCCAAGCGGCCCATGTCCATCCCTATCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CTCAGTCGTGGTGCTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTaGCACTGGGTTCTGGAAGAGCCCAGAATGGCTGCCCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LSRGAVRAGHAAELA*HWVLEEPRMAAQLW
Trigger: CCACAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCACCACGACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TTGTCCACCCGGATGCACTCGGTACAGCTCTTCACCTaGGCCTTCTTGCAGCGGTTGGCCAGGTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LSTRMHSVQLFT*AFLQRLARSPG
Trigger: CCCTGGAGACCTGGCCAACCGCTGCAAGAAGGCTCAGGTGAAGAGCTGTACCGAGTGCATCCGGGTGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp CCAGCAGCTGCTTCTCATCATCATCCTCAGGCCGGATaGAGAGGGGCACTCGCACATCCACCAGCTCCACGC +
Preference number: 6 (lower is better)
Translates to: PAAASHHHPQAG*RGALAHPPAPR
Trigger: GCGTGGAGCTGGTGGATGTGCGAGTGCCCCTCTTCATCCGGCCTGAGGATGATGATGAGAAGCAGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp AGACCTGGGACTTGCCATTGTCCAGGATGTGCCGGATaGCAGGGATGCGGGCCACCTGGTCTCCACGACTCA +
Preference number: 6 (lower is better)
Translates to: RPGTCHCPGCAG*QGCGPPGLHDS
Trigger: TGAGTCGTGGAGACCAGGTGGCCCGCATCCCTGTCATCCGGCACATCCTGGACAATGGCAAGTCCCAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGTGCTCAGTGTCATCAGAAACGCTGGGCCTCTGGCTaGTGGCTGGGGACCGCAGGACGTCATCACTGTACA +
Preference number: 6 (lower is better)
Translates to: GAQCHQKRWASG*WLGTAGRHHCT
Trigger: TGTACAGTGATGACGTCCTGCGGTCCCCAGCCAGCAGCCAGAGGCCCAGCGTTTCTGATGACACTGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS GCA 72 bp CCACGGGAATCTGTACCCCAGGAGGGTGCTGCTGACTaGCCGGCCAGGATTATAGAGTCTGGTGAACCCCTG +
Preference number: 6 (lower is better)
Translates to: PRESVPQEGAAD*PARIIESGEPL
Trigger: CAGGGGTTCACCAGACTCTATAATCCTGGCCGGGCAGTCAGCAGCACCCTCCTGGGGTACAGATTCCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021107.14
ENSMUST00000106460.9
ENSMUST00000169928.8
CDS GCA 72 bp GTGCTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTTaGACTGGGTTCTGGAAGAGCCCAGAATGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: VLCVLVTLLNSL*TGFWKSPEWLP
Trigger: GGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CACGCAGGCAGGGCTGTGTGTCACTCAGAGAGCCGGTaGAGCAGTTGCAGGTTTTGCCACTCCAGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: HAGRAVCHSESR*SSCRFCHSSPH
Trigger: ATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTCTCTGAGTGACACACAGCCCTGCCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TGGCGGAGCGGGGCGCCAGCAACACTGTGTCCACAATaGTGTGGTCTTGCTTTTTCCCGGTGTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: WRSGAPATLCPQ*CGLAFSRCWAA
Trigger: AGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCCCGCTCCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GTCTTCTCCACCCTGGGCGTCCACTATGGGGATGTCTaGGATGATAGGGATGGACATGGGCCGCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: VFSTLGVHYGDV*DDRDGHGPLGL
Trigger: CAGCCCAAGCGGCCCATGTCCATCCCTATCATCCCAGACATCCCCATAGTGGACGCCCAGGGTGGAGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GTGCGTGCTGGTCACGCTGCTGAACTCGCTTTGCACTaGGTTCTGGAAGAGCCCAGAATGGCTGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VRAGHAAELALH*VLEEPRMAAQL
Trigger: CAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GCGGCATGGGTGGCAAAGCCAGGGCGCTGCACATTGTaGGTGATCTTCCAGCGGACTGTGTCTCGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: AAWVAKPGRCTL*VIFQRTVSRPL
Trigger: CAAGGGACGAGACACAGTCCGCTGGAAGATCACCAACAATGTGCAGCGCCCTGGCTTTGCCACCCATGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp AGCCAGTTGAAATGGATCTTCCTGGACCCGGCAGCCTaGGCATTGGGGTTCTGTGGGGCGCCCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SQLKWIFLDPAA*ALGFCGAPRSP
Trigger: TGGAGACCTGGGCGCCCCACAGAACCCCAATGCCAAGGCTGCCGGGTCCAGGAAGATCCATTTCAACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GGTGCTGTGCGTGCTGGTCACGCTGCTGAACTCGCTTaGCACTGGGTTCTGGAAGAGCCCAGAATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GAVRAGHAAELA*HWVLEEPRMAA
Trigger: GGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp CCAGAAGCTCCGCCTGGGTGTTGCAGCGCCTCTCCTTaGACAGCTCGTCTGTGCAGTAGGCACAGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PEAPPGCCSASP*TARLCSRHSSC
Trigger: ACAAGAGCTGTGCCTACTGCACAGACGAGCTGTTCAAGGAGAGGCGCTGCAACACCCAGGCGGAGCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp ATAGAAGGCCTCCTCCAGCAGCTCCACGATGTTGGATaGATCCTCCTGCAGGACGCCCAGAGAGGAGACGGG +
Preference number: 6 (lower is better)
Translates to: IEGLLQQLHDVG*ILLQDAQRGDG
Trigger: CCCGTCTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCTGGAGGAGGCCTTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TGTACCCCATTGGCTTGCCAGGAGGGGGCAGCCAGTTaGAATGGATCTTCCTGGACCCGGCAGCCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: CTPLACQEGAAS*NGSSWTRQPWH
Trigger: ATGCCAAGGCTGCCGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CGGACTTGCAGGCCTTGGGGAGATACCTGGCTGCGGTaGAGGCTGGTGTCGATCTGGGTGTTCTCTGTGATT +
Preference number: 6 (lower is better)
Translates to: RTCRPWGDTWLR*RLVSIWVFSVI
Trigger: AATCACAGAGAACACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCCCCAAGGCCTGCAAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TCGCTGGTGAGCTGGCGCAGGATCTTGGCCAGGTTCTaGCCCATCTGCTTGAGGTTGTCCAGATCGTCAGAC +
Preference number: 6 (lower is better)
Translates to: SLVSWRRILARF*PICLRLSRSSD
Trigger: GTCTGACGATCTGGACAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCTCACCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GGCAGTCTTTCTTTTTGTGGACCAGGACTGTGCTGTTaGGCCCAGGGCTGCCATCGCCCTCCACGTTGTAGC +
Preference number: 6 (lower is better)
Translates to: GSLSFCGPGLCC*AQGCHRPPRCS
Trigger: GCTACAACGTGGAGGGCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACAAAAAGAAAGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TCCGTTTCATCGAGAATAACGGTGGTTGTGCTGGGCTaGCCCAGGCGGGCTCCGAACTTGGGGTTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: SVSSRITVVVLG*PRRAPNLGLLS
Trigger: ACTCAGCAACCCCAAGTTCGGAGCCCGCCTGGGCCAGCCCAGCACAACCACCGTTATTCTCGATGAAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021107.14
ENSMUST00000169928.8
CDS CCA 72 bp CACCGTAGAAGAGACTACATTGAAAGCCAGCCTCCCTaGCTCGCTGGGTACTTCCTGGTGGGTGCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: HRRRDYIESQPP*LAGYFLVGAAG
Trigger: TCCTGCCGCACCCACCAGGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTGCCTaGATAGGCAAAGTCCATCCGGCCATTCACCAGGTG +
Preference number: 6 (lower is better)
Translates to: GCSHSVQGVGAA*IGKVHPAIHQV
Trigger: CACCTGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp ACAGGTGTGGGCTCAGATGCGTGCCATAGGCCACATTaGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: TGVGSDACHRPH*LQSFCAGSWRC
Trigger: GCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATGTGGCCTATGGCACGCATCTGAGCCCACACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CTGGTCACGCTGCTGAACTCGCTTTGCACTGGGTTCTaGAAGAGCCCAGAATGGCTGCCCAGCTGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: LVTLLNSLCTGF*KSPEWLPSCGK
Trigger: CTTCCCACAGCTGGGCAGCCATTCTGGGCTCTTCCAGAACCCAGTGCAAAGCGAGTTCAGCAGCGTGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp TTGCAGATGCCCCCGTTGCTATCGATGCAGGTGGCATaGCTGAGGGGACAGTCACAGCTGCGGCCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: LQMPPLLSMQVA*LRGQSQLRPVQ
Trigger: TTGGACAGGCCGCAGCTGTGACTGTCCCCTCAGCAATGCCACCTGCATCGATAGCAACGGGGGCATCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GCCCAGCTCAGCTGCGTCACCGTAGAAGAGACTACATaGAAAGCCAGCCTCCCTGGCTCGCTGGGTACTTCC +
Preference number: 6 (lower is better)
Translates to: AQLSCVTVEETT*KASLPGSLGTS
Trigger: GGAAGTACCCAGCGAGCCAGGGAGGCTGGCTTTCAATGTAGTCTCTTCTACGGTGACGCAGCTGAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CGCTGCACATTGTTGGTGATCTTCCAGCGGACTGTGTCTCGTCCCTaGAGGTTCCCGCTTCGTAGCATGGGCGTGTCCAGGTGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RCTLLVIFQRTVSRP*RFPLRSMGVSRWSE
Trigger: CTCTGACCACCTGGACACGCCCATGCTACGAAGCGGGAACCTCAAGGGACGAGACACAGTCCGCTGGAAGATCACCAACAATGTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp AGGGTTGTCTCCGTCCACCCGGAAGGTCCTGGCTGGTGCTCCTCCTaGGGCCATCTCACAGGTCACCAGGTAGCCAAGGATATCTCCATT +
Preference number: 6 (lower is better)
Translates to: RVVSVHPEGPGWCSS*GHLTGHQVAKDISI
Trigger: AATGGAGATATCCTTGGCTACCTGGTGACCTGTGAGATGGCCCAAGGAGGAGCACCAGCCAGGACCTTCCGGGTGGACGGAGACAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GCGTCCATCCGGAGGCCATCAGAGAAGGAGGGTTTCAGGTGGATGTaGCCCCCTTGGTCTTCTTTAGCCAGCTGGCACACATGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: ASIRRPSEKEGFRWM*PPWSSLASWHTCVP
Trigger: TGGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGATGGCCTCCGGATGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CACATAGGAGTGGTTAGGCAGGAGATCCTCTACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTTGAGCCGATGCATCTCGCCGCCGTT +
Preference number: 6 (lower is better)
Translates to: HIGVVRQEILYHHRG*ARVRDVEPMHLAAV
Trigger: AACGGCGGCGAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTAGAGGATCTCCTGCCTAACCACTCCTATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CGTCTGTGCAGTAGGCACAGCTCTTGTCCACCCGGATaGACTCGGTACAGCTCTTCACCTGAGCCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: RLCSRHSSCPPG*TRYSSSPEPSC
Trigger: GCAAGAAGGCTCAGGTGAAGAGCTGTACCGAGTGCATCCGGGTGGACAAGAGCTGTGCCTACTGCACAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CAGGGCTGCCATCGCCCTCCACGTTGTAGCTGTAAGTaGAGTCGTCATCCTCATCCCGGAAGGAGCAGTACT +
Preference number: 6 (lower is better)
Translates to: QGCHRPPRCSCK*SRHPHPGRSST
Trigger: AGTACTGCTCCTTCCGGGATGAGGATGACGACTGCACTTACAGCTACAACGTGGAGGGCGATGGCAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TTTTGTGGACCAGGACTGTGCTGTTGGGCCCAGGGCTaGCATCGCCCTCCACGTTGTAGCTGTAAGTGCAGT +
Preference number: 6 (lower is better)
Translates to: FCGPGLCCWAQG*HRPPRCSCKCS
Trigger: ACTGCACTTACAGCTACAACGTGGAGGGCGATGGCAGCCCTGGGCCCAACAGCACAGTCCTGGTCCACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GTGCCCACAGGGACATCAATGGCCTCCACCAGCAGCTaGTTCTCATCATCATCCTCAGGCCGGATGAAGAGG +
Preference number: 6 (lower is better)
Translates to: VPTGTSMASTSS*FSSSSSGRMKR
Trigger: CCTCTTCATCCGGCCTGAGGATGATGATGAGAAGCAGCTGCTGGTGGAGGCCATTGATGTCCCTGTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp AGACCATCCATGAGGAAGGGCTCAGTCGTGGTGCTGTaGGTGCTGGTCACGCTGCTGAACTCGCTTTGCACT +
Preference number: 6 (lower is better)
Translates to: RPSMRKGSVVVL*VLVTLLNSLCT
Trigger: AGTGCAAAGCGAGTTCAGCAGCGTGACCAGCACGCACAGCACCACGACTGAGCCCTTCCTCATGGATGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GTCGCCCTGGATCCAGTACTTCACCCTGTACCCCATTaGCTTGCCAGGAGGGGGCAGCCAGTTGAAATGGAT +
Preference number: 6 (lower is better)
Translates to: VALDPVLHPVPH*LARRGQPVEMD
Trigger: ATCCATTTCAACTGGCTGCCCCCTCCTGGCAAGCCAATGGGGTACAGGGTGAAGTACTGGATCCAGGGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CACACACACTCTCCCATAGAACAGCGACCCCGGTCATaGCACAGGAATCCAGAGGTCCGGGGACACTGGAAG +
Preference number: 6 (lower is better)
Translates to: HTHSPIEQRPRS*HRNPEVRGHWK
Trigger: CTTCCAGTGTCCCCGGACCTCTGGATTCCTGTGCAATGACCGGGGTCGCTGTTCTATGGGAGAGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp TTGTTGGTGATCTTCCAGCGGACTGTGTCTCGTCCCTaGAGGTTCCCGCTTCGTAGCATGGGCGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLVIFQRTVSRP*RFPLRSMGVSR
Trigger: CCTGGACACGCCCATGCTACGAAGCGGGAACCTCAAGGGACGAGACACAGTCCGCTGGAAGATCACCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp ATGATAGCCTCTCTCTCGGGTCCCCATCCTGCCCCATaGCGCGCCTTAACCGTGTATCGGTATGGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: MIASLSGPHPAP*RALTVYRYGWD
Trigger: ATCCCAGCCATACCGATACACGGTTAAGGCGCGCAATGGGGCAGGATGGGGACCCGAGAGAGAGGCTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp TCTACCACCACCGAGGTTTGGCCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCGCCGTTTAGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: STTTEVWPGLGM*SRCISPPFSSW
Trigger: CCAGCTACTAAACGGCGGCGAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp GGCGCAGGATCTTGGCCAGGTTCTGCCCCATCTGCTTaGGGTTGTCCAGATCGTCAGACATGGAGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: GAGSWPGSAPSA*GCPDRQTWSWR
Trigger: TCTCCAACTCCATGTCTGACGATCTGGACAACCTCAAGCAGATGGGGCAGAACCTGGCCAAGATCCTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TGGGGCGCCCAGGTCTCCATGGGGTGGCGGAGGCGATaGAAGTGTTTGATTTATGAGACTCCTGTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: WGAQVSMGWRRR*KCLIYETPVRF
Trigger: GAAACGGACAGGAGTCTCATAAATCAAACACTTTCATCGCCTCCGCCACCCCATGGAGACCTGGGCGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CAGCTGGCACACATGTGTCCCATCTATGTCCTCCACTaGCCGGAGATGCACATTGTATGTGCCCACTTCCCC +
Preference number: 6 (lower is better)
Translates to: QLAHMCPIYVLH*PEMHIVCAHFP
Trigger: GGGGAAGTGGGCACATACAATGTGCATCTCCGGGCAGTGGAGGACATAGATGGGACACATGTGTGCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TGTCACTCAGAGAGCCGGTGGAGCAGTTGCAGGTTTTaGCACTCCAGCCCTCATTGCACACACAGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: CHSESRWSSCRF*HSSPHCTHSVH
Trigger: GTGGACACTGTGTGTGCAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTCTCTGAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTaGTGGAGCTTGTGTGCGCCGCTGACCTGTCTATAC +
Preference number: 6 (lower is better)
Translates to: FFPVLGCCRNFV*WSLCAPLTCLY
Trigger: GTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGCGCCAGCAACACTGTGTCCACAATGGTGTGGTCTTaGTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTC +
Preference number: 6 (lower is better)
Translates to: GASNTVSTMVWS*FFPVLGCCRNF
Trigger: GAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GCCACCTGGTCTCCACGACTCACCGAGTATTCAGGCTaGTCGAAGGACACTACCCCACTAGCTTGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: ATWSPRLTEYSG*SKDTTPLACSL
Trigger: CAAGGAACAAGCTAGTGGGGTAGTGTCCTTCGAGCAGCCTGAATACTCGGTGAGTCGTGGAGACCAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CATTGGCTGCAGTCATTCTGTGCAGGGAGTTGGCGCTaGCTGGATAGGCAAAGTCCATCCGGCCATTCACCA +
Preference number: 6 (lower is better)
Translates to: HWLQSFCAGSWR*LDRQSPSGHSP
Trigger: TGGTGAATGGCCGGATGGACTTTGCCTATCCAGGCAGCGCCAACTCCCTGCACAGAATGACTGCAGCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GGAGATACCTGGCTGCGGTGCAGGCTGGTGTCGATCTaGGTGTTCTCTGTGATTTCAAGGCTGCTCTCCATG +
Preference number: 6 (lower is better)
Translates to: GDTWLRCRLVSI*VFSVISRLLSM
Trigger: CATGGAGAGCAGCCTTGAAATCACAGAGAACACCCAGATCGACACCAGCCTGCACCGCAGCCAGGTATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TCCATCCGGAGGCCATCAGAGAAGGAGGGTTTCAGGTaGATGTTGCCCCCTTGGTCTTCTTTAGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SIRRPSEKEGFR*MLPPWSSLASW
Trigger: CCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGATGGCCTCCGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp GCCCCATTGCGCGCCTTAACCGTGTATCGGTATGGCTaGGATTCTCGCAGATTCTCAATGAGCAGCATCCGG +
Preference number: 6 (lower is better)
Translates to: APLRALTVYRYG*DSRRFSMSSIR
Trigger: CCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATACCGATACACGGTTAAGGCGCGCAATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TGGTTAGGCAGGAGATCCTCTACCACCACCGAGGTTTaGCCAGGGTTAGGGATGTTGAGCCGATGCATCTCG +
Preference number: 6 (lower is better)
Translates to: WLGRRSSTTTEV*PGLGMLSRCIS
Trigger: CGAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTAGAGGATCTCCTGCCTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CGGAGGCCATCAGAGAAGGAGGGTTTCAGGTGGATGTaGCCCCCTTGGTCTTCTTTAGCCAGCTGGCACACA +
Preference number: 6 (lower is better)
Translates to: RRPSEKEGFRWM*PPWSSLASWHT
Trigger: TGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGATGGCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGTCACTCAGAGAGCCGGTGGAGCAGTTGCAGGTTTaGCCACTCCAGCCCTCATTGCACACACAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: VSLREPVEQLQV*PLQPSLHTQCP
Trigger: TGGACACTGTGTGTGCAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTCCACCGGCTCTCTGAGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGTTGGGCTGCTGTCGGAACTTCGTCTGCTGGAGCTaGTGTGCGCCGCTGACCTGTCTATACACCTCATTC +
Preference number: 6 (lower is better)
Translates to: VLGCCRNFVCWS*CAPLTCLYTSF
Trigger: GAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GGGCGCCAGCAACACTGTGTCCACAATGGTGTGGTCTaGCTTTTTCCCGGTGTTGGGCTGCTGTCGGAACTT +
Preference number: 6 (lower is better)
Translates to: GRQQHCVHNGVV*LFPGVGLLSEL
Trigger: AAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGTGGACACAGTGTTGCTGGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GGGATGTCTGGGATGATAGGGATGGACATGGGCCGCTaGGGCTGTGTAGCCAGGTTGATGATAGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: GMSGMIGMDMGR*GCVARLMIASL
Trigger: GAGAGAGGCTATCATCAACCTGGCTACACAGCCCAAGCGGCCCATGTCCATCCCTATCATCCCAGACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGGTTAGGCAGGAGATCCTCTACCACCACCGAGGTTaGGCCAGGGTTAGGGATGTTGAGCCGATGCATCTC +
Preference number: 6 (lower is better)
Translates to: VVRQEILYHHRG*ARVRDVEPMHL
Trigger: GAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTAGAGGATCTCCTGCCTAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CCGGAGGCCATCAGAGAAGGAGGGTTTCAGGTGGATGTTGCCCCCTaGGTCTTCTTTAGCCAGCTGGCACACATGTGTCCCATCTATGTC +
Preference number: 6 (lower is better)
Translates to: PEAIREGGFQVDVAP*VFFSQLAHMCPIYV
Trigger: GACATAGATGGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGATGGCCTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp AGGAGATCCTCTACCACCACCGAGGTTTGGCCAGGGTTAGGGATGTaGAGCCGATGCATCTCGCCGCCGTTTAGTAGCTGGTATTCCACA +
Preference number: 6 (lower is better)
Translates to: RRSSTTTEVWPGLGM*SRCISPPFSSWYST
Trigger: TGTGGAATACCAGCTACTAAACGGCGGCGAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGTGGTGGTAGAGGATCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp CCACAAACTTTCCAAATCCAATGGTGTAGTCGCTGGTaGGCTGGCGCAGGATCTTGGCCAGGTTCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: PQTFQIQWCSRW*AGAGSWPGSAP
Trigger: TGGGGCAGAACCTGGCCAAGATCCTGCGCCAGCTCACCAGCGACTACACCATTGGATTTGGAAAGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp GTTATGCTTGGCAAGCAGGCGAACCAGCGTGGGCACTaGTGGGTAGTCCTGTGTCTTGTATTGGGTGTAGGC +
Preference number: 6 (lower is better)
Translates to: VMLGKQANQRGH*WVVLCLVLGVG
Trigger: GCCTACACCCAATACAAGACACAGGACTACCCATCAGTGCCCACGCTGGTTCGCCTGCTTGCCAAGCATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp GATCCTCACAGAGACCCAGGCGTATCGCAGAGTAGTTaGTCTCACAGGTGGTGTCCGTGTAGAGCGACTGCT +
Preference number: 6 (lower is better)
Translates to: DPHRDPGVSQSS*SHRWCPCRATA
Trigger: AGCAGTCGCTCTACACGGACACCACCTGTGAGATCAACTACTCTGCGATACGCCTGGGTCTCTGTGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGATGGCATCAAAGCCCCCTTCAGGAGCGTCCAGGTTaGCTGAGATGCGTTCTCCTTGCAGTTTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GWHQSPLQERPG*LRCVLLAVCSR
Trigger: TCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGGGGGCTTTGATGCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TCCTCCAGCAGCTCCACGATGTTGGATGAATCCTCCTaGAGGACGCCCAGAGAGGAGACGGGGAAATACTTA +
Preference number: 6 (lower is better)
Translates to: SSSSSTMLDESS*RTPREETGKYL
Trigger: TAAGTATTTCCCCGTCTCCTCTCTGGGCGTCCTGCAGGAGGATTCATCCAACATCGTGGAGCTGCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp GGGCTGCTGTCGGAACTTCGTCTGCTGGAGCTTGTGTaGGCCGCTGACCTGTCTATACACCTCATTCAGATT +
Preference number: 6 (lower is better)
Translates to: GLLSELRLLELV*AADLSIHLIQI
Trigger: AATCTGAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp ACAATGGTGTGGTCTTGCTTTTTCCCGGTGTTGGGCTaGTGTCGGAACTTCGTCTGCTGGAGCTTGTGTGCG +
Preference number: 6 (lower is better)
Translates to: TMVWSCFFPVLG*CRNFVCWSLCA
Trigger: CGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAAGCAAGACCACACCATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp ACCGAGGTTTGGCCAGGGTTAGGGATGTTGAGCCGATaGATCTCGCCGCCGTTTAGTAGCTGGTATTCCACA +
Preference number: 6 (lower is better)
Translates to: TEVWPGLGMLSR*ISPPFSSWYST
Trigger: TGTGGAATACCAGCTACTAAACGGCGGCGAGATGCATCGGCTCAACATCCCTAACCCTGGCCAAACCTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp ACCTCATTCAGATTTTCCTCCACCTCCTGGCGTAGCTaGTCACACTCTCGGGTGCCCGGCTTCATAAGGTTC +
Preference number: 6 (lower is better)
Translates to: TSFRFSSTSWRS*SHSRVPGFIRF
Trigger: GAACCTTATGAAGCCGGGCACCCGAGAGTGTGACCAGCTACGCCAGGAGGTGGAGGAAAATCTGAATGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp CTGTCTAGAAGGTGGGCTTCAGACTCAGAGTCGCCCTaGATCCAGTACTTCACCCTGTACCCCATTGGCTTG +
Preference number: 6 (lower is better)
Translates to: LSRRWASDSESP*IQYFTLYPIGL
Trigger: CAAGCCAATGGGGTACAGGGTGAAGTACTGGATCCAGGGCGACTCTGAGTCTGAAGCCCACCTTCTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp CTGATAACGTTCTTGAAGGAGAACGGGGGATCACTGTaGGGCCAGGGCTCCTTCAGTTTCTCGGGCCTCATG +
Preference number: 6 (lower is better)
Translates to: LITFLKENGGSL*GQGSFSFSGLM
Trigger: CATGAGGCCCGAGAAACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGTTCTCCTTCAAGAACGTTATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp AGGATGGCATCAAAGCCCCCTTCAGGAGCGTCCAGGTaGCCTGAGATGCGTTCTCCTTGCAGTTTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: RMASKPPSGASR*PEMRSPCSLFQ
Trigger: CTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGGGGGCTTTGATGCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp GGCATCAAAGCCCCCTTCAGGAGCGTCCAGGTTGCCTaGGATGCGTTCTCCTTGCAGTTTGTTCCAGAATTC +
Preference number: 6 (lower is better)
Translates to: GIKAPFRSVQVA*DAFSLQFVPEF
Trigger: GAATTCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGGGGGCTTTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TCAGAGAAGGAGGGTTTCAGGTGGATGTTGCCCCCTTaGTCTTCTTTAGCCAGCTGGCACACATGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: SEKEGFRWMLPP*SSLASWHTCVP
Trigger: TGGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CCA 72 bp TCCTGCCCCATTGCGCGCCTTAACCGTGTATCGGTATaGCTGGGATTCTCGCAGATTCTCAATGAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: SCPIARLNRVSV*LGFSQILNEQH
Trigger: ATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATACCGATACACGGTTAAGGCGCGCAATGGGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp ATCAGAGAAGGAGGGTTTCAGGTGGATGTTGCCCCCTaGGTCTTCTTTAGCCAGCTGGCACACATGTGTCCC +
Preference number: 6 (lower is better)
Translates to: IREGGFQVDVAP*VFFSQLAHMCP
Trigger: GGGACACATGTGTGCCAGCTGGCTAAAGAAGACCAAGGGGGCAACATCCACCTGAAACCCTCCTTCTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GTGGAGCAGTTGCAGGTTTTGCCACTCCAGCCCTCATaGCACACACAGTGTCCACACATGAAGTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VEQLQVLPLQPS*HTQCPHMKSPL
Trigger: CAGAGGAGACTTCATGTGTGGACACTGTGTGTGCAATGAGGGCTGGAGTGGCAAAACCTGCAACTGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TCCGTTAAGCTGATAACGTTCTTGAAGGAGAACGGGGGATCACTGTaGGGCCAGGGCTCCTTCAGTTTCTCGGGCCTCATGTCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: SVKLITFLKENGGSL*GQGSFSFSGLMSVC
Trigger: ACAGACAGACATGAGGCCCGAGAAACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGTTCTCCTTCAAGAACGTTATCAGCTTAACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TTTTTCCCGGTGTTGGGCTGCTGTCGGAACTTCGTCTGCTGGAGCTaGTGTGCGCCGCTGACCTGTCTATACACCTCATTCAGATTTTCC +
Preference number: 6 (lower is better)
Translates to: FFPVLGCCRNFVCWS*CAPLTCLYTSFRFS
Trigger: GGAAAATCTGAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGACAGCAGCCCAACACCGGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TGGGATTCTCGCAGATTCTCAATGAGCAGCATCCGGTTCTTGGGGTaGTCCACGAGCACCTTCTTCATAGGTCCAATGGGTCGGTTGTCC +
Preference number: 6 (lower is better)
Translates to: WDSRRFSMSSIRFLG*STSTFFIGPMGRLS
Trigger: GGACAACCGACCCATTGGACCTATGAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TATGGCTGGGATTCTCGCAGATTCTCAATGAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACCTTCTTCATAGGTCCAATGGGTCGG +
Preference number: 6 (lower is better)
Translates to: YGWDSRRFSMSSIRF*GLSTSTFFIGPMGR
Trigger: CCGACCCATTGGACCTATGAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TCCACACATGAAGTCTCCTCTGAAGTGACAGCGAGCTaGTCGAACTTCCTTTTGCAGCTCACAGGGGCACAC +
Preference number: 6 (lower is better)
Translates to: STHEVSSEVTAS*SNFLLQLTGAH
Trigger: GTGTGCCCCTGTGAGCTGCAAAAGGAAGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTTCATGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp GTCGGAACTTCGTCTGCTGGAGCTTGTGTGCGCCGCTaGCCTGTCTATACACCTCATTCAGATTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: VGTSSAGACVRR*PVYTPHSDFPP
Trigger: TGGAGGAAAATCTGAATGAGGTGTATAGACAGGTCAGCGGCGCACACAAGCTCCAGCAGACGAAGTTCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp TGTATCGGTATGGCTGGGATTCTCGCAGATTCTCAATaGGCAGCATCCGGTTCTTGGGGTTGTCCACGAGCA +
Preference number: 6 (lower is better)
Translates to: CIGMAGILADSQ*AASGSWGCPRA
Trigger: TGCTCGTGGACAACCCCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATCCCAGCCATACCGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp CAAAGCCCCCTTCAGGAGCGTCCAGGTTGCCTGAGATaGGTTCTCCTTGCAGTTTGTTCCAGAATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: QSPLQERPGCLR*VLLAVCSRILP
Trigger: TGGAAGAATTCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGGGGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GGCTGCTCGAAGGACACTACCCCACTAGCTTGTTCCTaGATAATGGTGATGTTTACCAGACGGCGACCAAGG +
Preference number: 6 (lower is better)
Translates to: GCSKDTTPLACS*IMVMFTRRRPR
Trigger: CCTTGGTCGCCGTCTGGTAAACATCACCATTATCAAGGAACAAGCTAGTGGGGTAGTGTCCTTCGAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GAGTATTCAGGCTGCTCGAAGGACACTACCCCACTAGCTTGTTCCTaGATAATGGTGATGTTTACCAGACGGCGACCAAGGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: EYSGCSKDTTPLACS*IMVMFTRRRPRVAV
Trigger: CACTGCCACCCTTGGTCGCCGTCTGGTAAACATCACCATTATCAAGGAACAAGCTAGTGGGGTAGTGTCCTTCGAGCAGCCTGAATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp GAGCAGTACTCCACCACCTCTTCTTTCTTAAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCGTCACACGCGCGCCCTTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: EQYSTTSSFLSSSTI*TLKGQSSHARPFFS
Trigger: GGAGAAGAAAGGGCGCGCGTGTGACGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCTTAAGAAAGAAGAGGTGGTGGAGTACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021107.14
ENSMUST00000169928.8
CDS CAA 90 bp CAGTACTCCACCACCTCTTCTGCTTTCTTAAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCGTCACACGCGCGCCCTTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QYSTTSSAFLSSSTI*TLKGQSSHARPFFS
Trigger: GGAGAAGAAAGGGCGCGCGTGTGACGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCTTAAGAAAGCAGAAGAGGTGGTGGAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS TCA 72 bp AGGTCTCCATGGGGTGGCGGAGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCCGTTTCATCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: RSPWGGGGDESV*FMRLLSVSSCS
Trigger: TGAGCACGATGAAACGGACAGGAGTCTCATAAATCAAACACTTTCATCGCCTCCGCCACCCCATGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS GCA 72 bp CATAATCCCGGTGTCCGTGTGCTGTATTATCCTGTGTaGTATAGGAGACCTGGGACTTGCCATTGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: HNPGVRVLYYPV*YRRPGTCHCPG
Trigger: TCCTGGACAATGGCAAGTCCCAGGTCTCCTATAGCACACAGGATAATACAGCACACGGACACCGGGATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp GATTCTCGCAGATTCTCAATGAGCAGCATCCGGTTCTaGGGGTTGTCCACGAGCACCTTCTTCATAGGTCCA +
Preference number: 6 (lower is better)
Translates to: DSRRFSMSSIRF*GLSTSTFFIGP
Trigger: TGGACCTATGAAGAAGGTGCTCGTGGACAACCCCAAGAACCGGATGCTGCTCATTGAGAATCTGCGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp ACCACCTCTTCTGCTTTCTTAAGCTCGTCTACCATCTaGACTTTAAAGGGGCAATCGTCACACGCGCGCCCT +
Preference number: 6 (lower is better)
Translates to: TTSSAFLSSSTI*TLKGQSSHARP
Trigger: AGGGCGCGCGTGTGACGATTGCCCCTTTAAAGTCAAGATGGTAGACGAGCTTAAGAAAGCAGAAGAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
CDS TCA 72 bp CACACACAGTGTCCACACATGAAGTCTCCTCTGAAGTaGCAGCGAGCTGATCGAACTTCCTTTTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: HTQCPHMKSPLK*QRADRTSFCSS
Trigger: TGAGCTGCAAAAGGAAGTTCGATCAGCTCGCTGTCACTTCAGAGGAGACTTCATGTGTGGACACTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp CCTTCATTTCGTAGTCGCAATAGGGATACAGGTTGGTaGGTTCCACTGAGGGCACCTTGCTGTCTAGAAGGT +
Preference number: 6 (lower is better)
Translates to: PSFRSRNRDTGW*VPLRAPCCLEG
Trigger: ACCTTCTAGACAGCAAGGTGCCCTCAGTGGAACTCACCAACCTGTATCCCTATTGCGACTACGAAATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS GCA 72 bp TCAGGAGCGTCCAGGTTGCCTGAGATGCGTTCTCCTTaGAGTTTGTTCCAGAATTCTTCCACATTCTCCGTT +
Preference number: 6 (lower is better)
Translates to: SGASRLPEMRSP*SLFQNSSTFSV
Trigger: AACGGAGAATGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 72 bp AATTCTTCCACATTCTCCGTTAAGCTGATAACGTTCTaGAAGGAGAACGGGGGATCACTGTTGGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: NSSTFSVKLITF*KENGGSLLGQG
Trigger: GCCCTGGCCCAACAGTGATCCCCCGTTCTCCTTCAAGAACGTTATCAGCTTAACGGAGAATGTGGAAGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp TTGTTCCAGAATTCTTCCACATTCTCCGTTAAGCTGATAACGTTCTaGAAGGAGAACGGGGGATCACTGTTGGGCCAGGGCTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LFQNSSTFSVKLITF*KENGGSLLGQGSFS
Trigger: ACTGAAGGAGCCCTGGCCCAACAGTGATCCCCCGTTCTCCTTCAAGAACGTTATCAGCTTAACGGAGAATGTGGAAGAATTCTGGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS CAA 90 bp CCTTCAGGAGCGTCCAGGTTGCCTGAGATGCGTTCTCCTTGCAGTTaGTTCCAGAATTCTTCCACATTCTCCGTTAAGCTGATAACGTTC +
Preference number: 6 (lower is better)
Translates to: PSGASRLPEMRSPCS*FQNSSTFSVKLITF
Trigger: GAACGTTATCAGCTTAACGGAGAATGTGGAAGAATTCTGGAACAAACTGCAAGGAGAACGCATCTCAGGCAACCTGGACGCTCCTGAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021107.14
ENSMUST00000068981.13
ENSMUST00000106458.2
ENSMUST00000106460.9
ENSMUST00000106461.8
ENSMUST00000169928.8
CDS TCA 72 bp AGGTCTCCATGGGGTGGCGGAGGCGATGAAAGTGTTTaGTTTATGAGACTCCTGTCCGTTTCATCGAGAATA +
Preference number: 6 (lower is better)
Translates to: RSPWGGGGDESV*FMRLLSVSSRI
Trigger: TATTCTCGATGAAACGGACAGGAGTCTCATAAATCAAACACTTTCATCGCCTCCGCCACCCCATGGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021107.14
ENSMUST00000169928.8