Pregenerated sensors for ITGB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020689Ensembl transcript IDs: ENSMUST00000021028.5
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCAAGCTAGCTTCTCAGAGGTAATGAGCACCTGCCGGGCATCATaGGTCCCCCTCAAGCTAAGCAGGAAGAATCCTTTGGGGAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: KQASFSEVMSTCRAS*VPLKLSRKNPLGRA Trigger: GGCCCTCCCCAAAGGATTCTTCCTGCTTAGCTTGAGGGGGACTCATGATGCCCGGCAGGTGCTCATTACCTCTGAGAAGCTAGCTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | CCTCTGGAATGGGGGTTGGGGAACCTCAGCCCTGCCCTTCTCTTCTaGGAGAATGGCCTGACAAAGCAAGCTAGCTTCTCAGAGGTAATG | + |
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Preference number: 1 (lower is better) Translates to: PLEWGLGNLSPALLF*ENGLTKQASFSEVM Trigger: CATTACCTCTGAGAAGCTAGCTTGCTTTGTCAGGCCATTCTCCCAGAAGAGAAGGGCAGGGCTGAGGTTCCCCAACCCCCATTCCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | GAACAGGCCACACATGCAGTTCTGACTGGCCTTTCAACTCCTCCCTaGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: EQATHAVLTGLSTPP*HVVQQTHGRLGGLL Trigger: AAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCCAGGGAGGAGTTGAAAGGCCAGTCAGAACTGCATGTGTGGCCTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | GGTTGTCCAGCCCACAGGAGAACAGGCCACACATGCAGTTCTGACTaGCCTTTCAACTCCTCCCTGGCACGTTGTTCAACAGACTCATGG | + |
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Preference number: 1 (lower is better) Translates to: GCPAHRRTGHTCSSD*PFNSSLARCSTDSW Trigger: CCATGAGTCTGTTGAACAACGTGCCAGGGAGGAGTTGAAAGGCCAGTCAGAACTGCATGTGTGGCCTGTTCTCCTGTGGGCTGGACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | GCTGGCTTTCTCCTGTACTCGAGGCCTGCTCACCACACCAACATCTaGATCAGCCACTCCTTACTGAAGGTCCTCCCTGGTATGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: AGFLLYSRPAHHTNI*ISHSLLKVLPGMQM Trigger: CATCTGCATACCAGGGAGGACCTTCAGTAAGGAGTGGCTGATCCAGATGTTGGTGTGGTGAGCAGGCCTCGAGTACAGGAGAAAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 90 bp | TGGACCGAAACCACCTGTAAGAGAACGGGCCCAGCCGCTCTGTGCTaGGCATTCATTCCCAGCACAATTTTAGATGTTCATCCCCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: WTETTCKRTGPAALC*AFIPSTILDVHPLE Trigger: TTCCAGGGGATGAACATCTAAAATTGTGCTGGGAATGAATGCGCAGCACAGAGCGGCTGGGCCCGTTCTCTTACAGGTGGTTTCGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 90 bp | ACAAGGACTTTCCTTATGAGAGAGAGAGCCATAGCAGGACTGAGGTaGTGGCAAAAGCCACAGGCAACTCTTGAGGACTCGATTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: TRTFLMRERAIAGLR*WQKPQATLEDSILP Trigger: GGGGAGAATCGAGTCCTCAAGAGTTGCCTGTGGCTTTTGCCAGCACCTCAGTCCTGCTATGGCTCTCTCTCTCATAAGGAAAGTCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | TCCTTCACAAGACACCGAAGAGGTAGATACACACAAGCACCCCCATaGATGGGTGTAGCAAGCACACAGAGGCATAGGATGAGGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SFTRHRRGRYTQAPP*MGVASTQRHRMRCV Trigger: CACACACCTCATCCTATGCCTCTGTGTGCTTGCTACACCCATCCATGGGGGTGCTTGTGTGTATCTACCTCTTCGGTGTCTTGTGAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 90 bp | TTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACAGAGCTACCTaGCAGGCATTCTCTGTCTCTTCCTGTTGTCCTCAGACAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: FRMTVSEGKNGNRAT*QAFSVSSCCPQTET Trigger: AGTCTCTGTCTGAGGACAACAGGAAGAGACAGAGAATGCCTGGCAGGTAGCTCTGTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | CCACACCAACATCTGGATCAGCCACTCCTTACTGAAGGTCCTCCCTaGTATGCAGATGCAACTGTATGCAGAGTGAACAAGAAAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: PHQHLDQPLLTEGPP*YADATVCRVNKKEQ Trigger: TTGTTCTTTCTTGTTCACTCTGCATACAGTTGCATCTGCATACCAGGGAGGACCTTCAGTAAGGAGTGGCTGATCCAGATGTTGGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR TCA 90 bp | ATAAAATTGCACTTGTGGCCTCCCAGATTAAAGGCTGAGATAAAATaGGGTTGTCCAGCCCACAGGAGAACAGGCCACACATGCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: IKLHLWPPRLKAEIK*GCPAHRRTGHTCSS Trigger: AGAACTGCATGTGTGGCCTGTTCTCCTGTGGGCTGGACAACCTCATTTTATCTCAGCCTTTAATCTGGGAGGCCACAAGTGCAATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACGTTTTCAGTaGTGGGAATCAAACCCAGGACATTCCTTAACTGCTTGTTCTACT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTRFQ*WESNPGHSLTACST Trigger: AGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | CTGGGAATCAAACCCAGGACATTCCTTAACTGCTTGTTCTACTACTaGTCAACATTCCAGCCTCCTTATACACACACAGAATCTGGACCG | + |
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Preference number: 1 (lower is better) Translates to: LGIKPRTFLNCLFYY*STFQPPYTHTESGP Trigger: CGGTCCAGATTCTGTGTGTGTATAAGGAGGCTGGAATGTTGACCAGTAGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 90 bp | CACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTaGTTGTTCTACTACTGGTCAACATTCCAGCCTCCTTATACACAC | + |
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Preference number: 1 (lower is better) Translates to: HTFSVLGIKPRTFLN*LFYYWSTFQPPYTH Trigger: GTGTGTATAAGGAGGCTGGAATGTTGACCAGTAGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 90 bp | GCACCTGAGAAGTGTAGAAAAAGGATCAGAAGTTCAAGTCAACCTTaGCTACATAGCAAGTTCAAAGCCATCCTGGGATACATGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: APEKCRKRIRSSSQP*LHSKFKAILGYMRP Trigger: GGGTCTCATGTATCCCAGGATGGCTTTGAACTTGCTATGTAGCCAAGGTTGACTTGAACTTCTGATCCTTTTTCTACACTTCTCAGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | TCGGGGGACTCCTTCACAAGACACCGAAGAGGTAGATACACACAAGCACCCCCATTTGGGGAGGGCCCCTaGGGACAAAGGCTGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SGDSFTRHRRGRYTQAPPFGEGP*GQRLWS Trigger: GCTCCACAGCCTTTGTCCTCAGGGGCCCTCCCCAAA...TGGGGGTGCTTGTGTGTATCTACCTCTTCGGTGTCTTGTGAAGGAGTCCCCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGGACTCCTTCACAAGACACCGAAGAGGTAGATACACACAAGCACCCCCACTCTGGAATGGGGGTTaGGGAACCTCAGCCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SGDSFTRHRRGRYTQAPPLWNGG*GTSALP Trigger: GGGCAGGGCTGAGGTTCCCCAACCCCCATTCCAGAG...TGGGGGTGCTTGTGTGTATCTACCTCTTCGGTGTCTTGTGAAGGAGTCCCCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTCCCCCAGGCCATGCATaGCCCCTGAGTGGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PLTGKLLRMFATHSVWGFPPGHA*PLSGLA Trigger: GGCAAGGCCACTCAGGGGTCATGCATGGCCTGGGGG...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACCACAGAGGCATAGGATaGGGTGTGTGGAGGTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHHRGIG*GVWRCP Trigger: CGGGCACCTCCACACACCTCATCCTATGCCTCTGTG...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACAGAAAGCCTGGAGAGTaGGGATGGACCTCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHRKPGE*GWTSSS Trigger: AGAGCTGGAGGTCCATCCCCACTCTCCAGGCTTTCT...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCCACTTCCTCTGGAATaGGGGTTGGGGAACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNPLPLE*GLGNLS Trigger: GCTGAGGTTCCCCAACCCCCATTCCAGAGGAAGTGG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGGAGGAGCAGAAAGCCTaGAGAGTGGGGATGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGEEQKA*RVGMDL Trigger: GAGGTCCATCCCCACTCTCCAGGCTTTCTGCTCCTC...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CAA 90 bp | GAACGGGAACAGAGCTACCTGCCAGGCATTCTCTGTCTCTTCCTGTaGTCCTCAGACAGAGACTGGACCGAAACCACCTGTAAGAGAACG | + |
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Preference number: 2 (lower is better) Translates to: EREQSYLPGILCLFL*SSDRDWTETTCKRT Trigger: CGTTCTCTTACAGGTGGTTTCGGTCCAGTCTCTGTCTGAGGACAACAGGAAGAGACAGAGAATGCCTGGCAGGTAGCTCTGTTCCCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACTACATTCCCACATACTaGCATTCTTCCAGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHYIPTY*HSSSPA Trigger: GGCTGGGCTGGAAGAATGTCAGTATGTGGGAATGTA...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTGCCCTGGAGAGTGGGGATaGACCTCCAGCTCTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: HTHTFSVLGIKPRTFLNCPGEWG*TSSSDH Trigger: GTGGTCAGAGCTGGAGGTCCATCCCCACTCTCCAGG...GCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGTTCTACCACAGCTGTTaGCAGTCAGCCCCAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGFYHSC*QSAPRT Trigger: GGTTCTTGGGGCTGACTGTCAACAGCTGTGGTAGAA...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCCACACATGCAGTTCTaGCTGGCCTTTCAACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNPHMQF*LAFQLL Trigger: GAGGAGTTGAAAGGCCAGTCAGAACTGCATGTGTGG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR GCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCAGCAGAGCAAACCATaGTTGCTGGGCCAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNQQSKP*LLGQQN Trigger: GTTCTGTTGGCCCAGCAAGCATGGTTTGCTCTGCTG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTGCGCAGGAAGAATCCTTTaGGGAGGGCCCCTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: HTHTFSVLGIKPRTFLNCAGRIL*GGPLRT Trigger: TGTCCTCAGGGGCCCTCCCCAAAGGATTCTTCCTGC...GCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | GTAATGTTCTTGCCTAGCATGTGTGATGTCCTGGGTTCTATTCCCAGCACTGCAGCAGGACTGAGGTGCTaGCAAAAGCCACAGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: VMFLPSMCDVLGSIPSTAAGLRC*QKPQAT Trigger: AGTTGCCTGTGGCTTTTGCCAGCACCTCAGTCCTGC...TGCAGTGCTGGGAATAGAACCCAGGACATCACACATGCTAGGCAAGAACATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCACCACACCAACATCTaGATCAGCCACTCCTTACTG | + |
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Preference number: 2 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNHHTNI*ISHSLL Trigger: CAGTAAGGAGTGGCTGATCCAGATGTTGGTGTGGTG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACCCAATGAGGCAATTCTaGATGGCTGTGATTATGATC | + |
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Preference number: 2 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHPMRQF*MAVIMI Trigger: GATCATAATCACAGCCATTCAGAATTGCCTCATTGG...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR GCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCACACACGTTTTCAGTaGTGGGAATCAAACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNHTRFQ*WESNPG Trigger: TCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | GTAATGTTCTTGCCTAGCATGTGTGATGTCCTGGGTTCTATTCCCAGCACTGCATCAGCCCATAGCATCTaGCAATGTCAGAGAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VMFLPSMCDVLGSIPSTASAHSI*QCQRAS Trigger: TGAGGCTCTCTGACATTGTCAGATGCTATGGGCTGA...TGCAGTGCTGGGAATAGAACCCAGGACATCACACATGCTAGGCAAGAACATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGAGGTAAGAGATGGTGTTGACACAATGACACATGTTCACAAATCTCCTGGGGAACCTCAGCCCTaGCCTTCTCTTCTGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: KQEVRDGVDTMTHVHKSPGEPQP*PSLLGE Trigger: TTCTCCCAGAAGAGAAGGGCAGGGCTGAGGTTCCCC...AGGAGATTTGTGAACATGTGTCATTGTGTCAACACCATCTCTTACCTCCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAACCCAGTCGAGAAACCTCTTCAAGAAAGGGTCAGTGTGTCCACATACCATGGTGTTGACACAATaGCACATGTTCACAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PRTQSRNLFKKGSVCPHTMVLTQ*HMFTNL Trigger: GAGATTTGTGAACATGTGTCATTGTGTCAACACCAT...GGTATGTGGACACACTGACCCTTTCTTGAAGAGGTTTCTCGACTGGGTTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACAGTTCAAGTCAACCTTaGCTACATAGCAAGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHSSSQP*LHSKFK Trigger: TTTGAACTTGCTATGTAGCCAAGGTTGACTTGAACT...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CAA 90 bp | GATGTTGATACTAAAGCTGGGAATACAGATCAGTTGGTAATGTTCTaGCCTAGCATGTGTGATGTCCTGGGTTCTATTCCCAGCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: DVDTKAGNTDQLVMF*PSMCDVLGSIPSTA Trigger: TGCAGTGCTGGGAATAGAACCCAGGACATCACACATGCTAGGCAAGAACATTACCAACTGATCTGTATTCCCAGCTTTAGTATCAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCACATGCAGTTCTGACTaGCCTTTCAACTCCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSTCSSD*PFNSSL Trigger: CAGGGAGGAGTTGAAAGGCCAGTCAGAACTGCATGT...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTGTAATTGTAGCACCTGAGAAGTGTAGAAAAAGGATCAGAAGTTCAAGTTATAGAACCAAGACTTaGCACCACTTCCTCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: MPVIVAPEKCRKRIRSSSYRTKT*HHFLWN Trigger: ATTCCAGAGGAAGTGGTGTCAAGTCTTGGTTCTATA...ACTTGAACTTCTGATCCTTTTTCTACACTTCTCAGGTGCTACAATTACAGGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 72 bp | GCCAAGAGTAACCCAAGGGCACAACCGGACAGTCGCTaGCTTTCTCCTGTACTCGAGGCCTGCTCACCACAC | + |
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Preference number: 3 (lower is better) Translates to: AKSNPRAQPDSR*LSPVLEACSPH Trigger: GTGTGGTGAGCAGGCCTCGAGTACAGGAGAAAGCCAGCGACTGTCCGGTTGTGCCCTTGGGTTACTCTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR GCA 72 bp | CCGGACAGTCGCTGGCTTTCTCCTGTACTCGAGGCCTaGTCACCACACCAACATCTGGATCAGCCACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PDSRWLSPVLEA*SPHQHLDQPLL Trigger: AAGGAGTGGCTGATCCAGATGTTGGTGTGGTGAGCAGGCCTCGAGTACAGGAGAAAGCCAGCGACTGTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR TCA 72 bp | CAAGCTAAGCAGGAAGAATCCTTTGGGGAGGGCCCCTaGGGACAAAGGCTGTGGAGCTCTGCCTGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: QAKQEESFGEGP*GQRLWSSACET Trigger: TGTCTCACAGGCAGAGCTCCACAGCCTTTGTCCTCAGGGGCCCTCCCCAAAGGATTCTTCCTGCTTAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR CCA 72 bp | CTCCTGTACTCGAGGCCTGCTCACCACACCAACATCTaGATCAGCCACTCCTTACTGAAGGTCCTCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LLYSRPAHHTNI*ISHSLLKVLPG Trigger: ACCAGGGAGGACCTTCAGTAAGGAGTGGCTGATCCAGATGTTGGTGTGGTGAGCAGGCCTCGAGTACAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CAA 90 bp | CCCAGAACCCAGTCGAGAAACCTCTTCAAGAAAGGGTCAGTGTGTCCACATACCAGCAGGAAGAATCCTTaGGGGAGGGCCCCTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: PRTQSRNLFKKGSVCPHTSRKNP*GRAPED Trigger: GTCCTCAGGGGCCCTCCCCAAAGGATTCTTCCTGCT...GGTATGTGGACACACTGACCCTTTCTTGAAGAGGTTTCTCGACTGGGTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR-3UTR CAA 90 bp | CACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTGCCCTCTGGAATGGGGGTaGGGGAACCTCAGCCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: HTHTFSVLGIKPRTFLNCPLEWG*GNLSPA Trigger: GGCAGGGCTGAGGTTCCCCAACCCCCATTCCAGAGG...GCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| 3UTR TCA 72 bp | AGGGAGGGAGGTGGGCAGAGGCACAGACGATACAGCTaGGCTTCAACGTCAAGCACTTTCTACCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: REGGGQRHRRYS*ASTSSTFYHSC Trigger: ACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGTATCGTCTGTGCCTCTGCCCACCTCCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | GCCCACAGGAGAACAGGCCACACATGCAGTTCTGACTaGCCTTTCAACTCCTCCCTGGCACGTTGTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: AHRRTGHTCSSD*PFNSSLARCST Trigger: TGTTGAACAACGTGCCAGGGAGGAGTTGAAAGGCCAGTCAGAACTGCATGTGTGGCCTGTTCTCCTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | ACACATGCAGTTCTGACTGGCCTTTCAACTCCTCCCTaGCACGTTGTTCAACAGACTCATGGGAGACTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: THAVLTGLSTPP*HVVQQTHGRLG Trigger: CCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCCAGGGAGGAGTTGAAAGGCCAGTCAGAACTGCATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | ATTCTCTGTCTCTTCCTGTTGTCCTCAGACAGAGACTaGACCGAAACCACCTGTAAGAGAACGGGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILCLFLLSSDRD*TETTCKRTGPA Trigger: GGCTGGGCCCGTTCTCTTACAGGTGGTTTCGGTCCAGTCTCTGTCTGAGGACAACAGGAAGAGACAGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCAGAGCAAACCATGCTaGCTGGGCCAACAGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNQSKPC*LGQQNP Trigger: TGGGTTCTGTTGGCCCAGCAAGCATGGTTTGCTCTG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR TCA 72 bp | AGCTTCTCAGAGGTAATGAGCACCTGCCGGGCATCATaGGTCCCCCTCAAGCTAAGCAGGAAGAATCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SFSEVMSTCRAS*VPLKLSRKNPL Trigger: CAAAGGATTCTTCCTGCTTAGCTTGAGGGGGACTCATGATGCCCGGCAGGTGCTCATTACCTCTGAGAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | AGACACCGAAGAGGTAGATACACACAAGCACCCCCATaGATGGGTGTAGCAAGCACACAGAGGCATAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RHRRGRYTQAPP*MGVASTQRHRM Trigger: CATCCTATGCCTCTGTGTGCTTGCTACACCCATCCATGGGGGTGCTTGTGTGTATCTACCTCTTCGGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | GGAAGAGGGAAGCCCCTTGCAGACCCAGCCACTGACTaGCAAGTTACTAAGAATGTTTGCCACACACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRGKPLADPATD*QVTKNVCHTLC Trigger: ACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGGCTGGGTCTGCAAGGGGCTTCCCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR TCA 72 bp | CACTTGTGGCCTCCCAGATTAAAGGCTGAGATAAAATaGGGTTGTCCAGCCCACAGGAGAACAGGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: HLWPPRLKAEIK*GCPAHRRTGHT Trigger: TGTGTGGCCTGTTCTCCTGTGGGCTGGACAACCTCATTTTATCTCAGCCTTTAATCTGGGAGGCCACAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR GCA 72 bp | ACATTAGATCTAAGTCAATGCCAGCAGAGCAAACCATaGTTGCTGGGCCAACAGAACCCAGAACCCAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: TLDLSQCQQSKP*LLGQQNPEPSR Trigger: TCGACTGGGTTCTGGGTTCTGTTGGCCCAGCAAGCATGGTTTGCTCTGCTGGCATTGACTTAGATCTAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAAATCCAAAAGAATATaGAACTCCAGAGGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGKSKRI*NSRGVG Trigger: CCCCACCCCTCTGGAGTTCAATATTCTTTTGGATTT...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR TCA 72 bp | ACAAAGACTCTGATGTTGCTGTGGGCAGCTTCAGAATaGCTGTCTCTGAGGGAAAGAACGGGAACAGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TKTLMLLWAASE*LSLRERTGTEL Trigger: TAGCTCTGTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGAGTCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGCGGCATCTTAGGATGTaGATACTAAAGCTGGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGRHLRM*ILKLGI Trigger: TATTCCCAGCTTTAGTATCAACATCCTAAGATGCCG...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR TCA 72 bp | CAAATCTCCTGGGAAGAGCTACCAATGAGGCAATTCTaGATGGCTGTGATTATGATCTTGGAGGTGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QISWEELPMRQF*MAVIMILEVLA Trigger: TGCCAGCACCTCCAAGATCATAATCACAGCCATTCAGAATTGCCTCATTGGTAGCTCTTCCCAGGAGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR GCA 72 bp | TCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTaGTTGTTCTACTACTGGTCAACATTCCAGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SVLGIKPRTFLN*LFYYWSTFQPP Trigger: AGGAGGCTGGAATGTTGACCAGTAGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR GCA 72 bp | ACACACACACACACACACACACACACACGTTTTCAGTaGTGGGAATCAAACCCAGGACATTCCTTAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTRFQ*WESNPGHSLTA Trigger: AGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | AAACCCAGGACATTCCTTAACTGCTTGTTCTACTACTaGTCAACATTCCAGCCTCCTTATACACACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPRTFLNCLFYY*STFQPPYTHTE Trigger: TTCTGTGTGTGTATAAGGAGGCTGGAATGTTGACCAGTAGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CCA 72 bp | AAGTGTAGAAAAAGGATCAGAAGTTCAAGTCAACCTTaGCTACATAGCAAGTTCAAAGCCATCCTGGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: KCRKRIRSSSQP*LHSKFKAILGY Trigger: GTATCCCAGGATGGCTTTGAACTTGCTATGTAGCCAAGGTTGACTTGAACTTCTGATCCTTTTTCTACACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCCCGCTGGCTGCAGATaGGCTGGCCCTCCTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNPAGCR*AGPPWG Trigger: GCCCCAAGGAGGGCCAGCCCATCTGCAGCCAGCGGG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCCAAGACTCTCCCCGCTGGCTaGAGATGGGCTGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFNVKHFLPQLLTVSPKTLPAG*RWAGPP Trigger: AGGAGGGCCAGCCCATCTGCAGCCAGCGGGGAGAGT...CTTGGGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | CGCCCAAGCACCACAAGCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTAGTTGCCCCGGCCGCTaGACAGCAGCCCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSTTSLIPETVKIPTHLSCPGR*TAAHWW Trigger: CCACCAATGGGCTGCTGTGCAGCGGCCGGGGCAACT...AAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGCTTGTGGTGCTTGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACCGTGGGCTGGAAGGCTaGGCAAAGGCCTGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHRGLEG*AKAWQA Trigger: TGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACG...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGGGGCAGGACAATGCCTaGCAGCCTTCCATCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGGQDNA*QPSIQG Trigger: GCCCTGGATGGAAGGCTGGCAGGCATTGTCCTGCCC...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACGGAGCGTTCCCCGGTTaGACTTCTTACACTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HDREPQPIASDHDREPQHGAFPG*TSYTPH Trigger: GTGTGGAGTGTAAGAAGTTCAACCGGGGAACGCTCC...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACTCTTGCCGAAGTCGCTaGTATGGCAGACACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HDREPQPIASDHDREPQHSCRSR*YGRHTG Trigger: GCCAGTGTGTCTGCCATAGCAGCGACTTCGGCAAGA...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGAGAAAGCATCTGACCATGAGAGAGAGCCTCAGCCCATAGCATCTGACCTAGCCTCCAGGATCTaGGCCTCACTGACTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEEKASDHEREPQPIASDLASRI*ASLTGN Trigger: GTTCCCAGTCAGTGAGGCCCAGATCCTGGAGGCTAG...GTCAGATGCTATGGGCTGAGGCTCTCTCTCATGGTCAGATGCTTTCTCCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACCAGTCGAAGGTCACCTaGACGGTGAGGCTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHQSKVT*TVRLSL Trigger: TAAGGACAGCCTCACCGTCCAGGTGACCTTCGACTG...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGTGTTGCAGCGTGGGCTaGAAGGCTGGGCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGCCSVG*KAGQRP Trigger: AGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACA...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CGCCCAAGCACCACAAGCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTCAGAGCACTCACACATaGACCCCAGCCAGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSTTSLIPETVKIPTHLQSTHT*TPASPG Trigger: ACCAGGGCTGGCTGGGGTCCATGTGTGAGTGCTCTG...AAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGCTTGTGGTGCTTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGAGAAAGCATCTGACCATGAGAGAGAGCCTCAGCCCATAGCATCTGACCATCGGGGTGAGCCCTaGGACAAAGTCTCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEEKASDHEREPQPIASDHRGEP*DKVSSE Trigger: CTCAGATGAGACTTTGTCTCAGGGCTCACCCCGATG...GTCAGATGCTATGGGCTGAGGCTCTCTCTCATGGTCAGATGCTTTCTCCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACCCAGTCGAGAAACCTCTTCAAGAAAGGGTCAGTGTGTCCACATACCCTCACAGCCAGACACTaGTGGCAGGAGTTCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSRNLFKKGSVCPHTLTARH*WQEFTP Trigger: AGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAG...GGTATGTGGACACACTGACCCTTTCTTGAAGAGGTTTCTCGACTGGGTTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACACAGCCAGACACTGCTaGCAGGAGTTCACGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHTARHC*QEFTPR Trigger: ACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGT...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACCCAGGGTCTGGATGCTaGACAGATCATCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHPGSGC*TDHPSW Trigger: CCATGAAGGATGATCTGTCCAGCATCCAGACCCTGG...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTGACTGCTCCTTCTCCTaGGGGCAGCCACGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHVFSAGNQTQDIPDCSFS*GQPRTL Trigger: CAAGGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTC...AGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCCCGAAGTCGCTGCTATaGCAGACACACTGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAELQRQALSTTAVDSQPPKSLL*QTHWPQ Trigger: CTGTGGCCAGTGTGTCTGCCATAGCAGCGACTTCGG...GGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACGTCTCCATAGGAGCCTaGCTGGACGCACACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHVSIGA*LDAHTA Trigger: AGCTGTGTGTGCGTCCAGCCAGGCTCCTATGGAGAC...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CAA 72 bp | CCCATCTTCACATGCTTCCAGGAAGAGGGAAGCCCCTaGCAGACCCAGCCACTGACTGGCAAGTTACTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIFTCFQEEGSP*QTQPLTGKLLR Trigger: TCTTAGTAACTTGCCAGTCAGTGGCTGGGTCTGCAAGGGGCTTCCCTCTTCCTGGAAGCATGTGAAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACTCCACCTGCCGCACTTaGAGTGAGAAGATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHSTCRT*SEKIFE Trigger: TTCGAAGATCTTCTCACTTCAAGTGCGGCAGGTGGA...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACCGTAGTACTGGAATCTaGCGACACAGTCATCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HDREPQPIASDHDREPQHRSTGI*RHSHPR Trigger: ACGAGGATGACTGTGTCGTCAGATTCCAGTACTACG...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCCATTGGGCAGGACAATaGCTGCCAGCCTTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAELQRQALSTTAVDSQPHWAGQ*LPAFHP Trigger: TGGATGGAAGGCTGGCAGGCATTGTCCTGCCCAATG...GGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTGGCTGGGCAAAGGCCTaGCAGGCACAGTCACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLTGKLLRMFATHSVWGFGWAKA*QAQSQS Trigger: CGACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCC...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CGCCCAAGCACCACAAGCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTGCACAGCAGCCCATTaGTGGACATGCAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSTTSLIPETVKIPTHLCTAAH*WTCRCQ Trigger: CTGACACCTGCATGTCCACCAATGGGCTGCTGTGCA...AAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGCTTGTGGTGCTTGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACCTGCCGCACTTGAAGTaGGAAGATCTTCGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: HDREPQPIASDHDREPQHLPHLK*EDLRII Trigger: GATGATTCGAAGATCTTCTCACTTCAAGTGCGGCAG...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCTCTTCACTTCTTCATTaGAGCGGGACACCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAELQRQALSTTAVDSQPSSLLH*SGTPGR Trigger: CCGACCAGGTGTCCCGCTTCAATGAAGAAGTGAAGA...GGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACCGTAAGCATCAACAATaGGCTGGAGGACGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNRKHQQ*AGGRCL Trigger: CAAGCAACGTCCTCCAGCTCATTGTTGATGCTTACG...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACTTGATAGTGAAAGACTaGTCCTTCTCCTGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHLIVKD*SFSWGQ Trigger: CTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAA...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACAGGCCCTCCTTGGGGCTaGACTCTTCCTGCTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFQKPSRFLLTFHSSNTGPPWG*TLPAER Trigger: CCTCTCAGCAGGAAGAGTGCAGCCCCAAGGAGGGCC...TGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCGACCCCAGCCAGCCCTaGTCACAGCGGCACACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSDPSQP*SQRHTP Trigger: TGGGGTGTGCCGCTGTGACCAGGGCTGGCTGGGGTC...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTAACTGCACAGCAGCCCATTGGTaGACATGCAGGTGTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTFSVLGIKPRTFLNCTAAHW*TCRCQC Trigger: GCACTGACACCTGCATGTCCACCAATGGGCTGCTGT...GCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCCTGTGGTCCCAGGAATaGGCTCACTATAATTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAELQRQALSTTAVDSQPLWSQE*AHYNSG Trigger: ACCAGAATTATAGTGAGCTCATTCCTGGGACCACAG...GGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR TCA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTCACAGTACTTGCCAGTaGTCTTGCCGAAGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTGKLLRMFATHSVWGFHSTCQ*SCRSRC Trigger: GCAGCGACTTCGGCAAGATCACTGGCAAGTACTGTG...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGAACGCATCAACAATGAGCTaGAGGACGTTGCTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVAVGSFRMTVSEGKNGNASTMS*RTLLES Trigger: TGACTCAAGCAACGTCCTCCAGCTCATTGTTGATGC...GTTCCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCTGGCTGCAGATGGGCTaGCCCTCCTTGGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSWLQMG*PSLGLH Trigger: GTGCAGCCCCAAGGAGGGCCAGCCCATCTGCAGCCA...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACAATTCCTTCCGGTCATaGATAGTGATGAGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHNSFRS*IVMSSF Trigger: GAAGCTACTCATCACTATCCATGACCGGAAGGAATT...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTACCCAGGGTCTGGATaGTGGACAGATCATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHVFSAGNQTQDIPYPGSG*WTDHPS Trigger: TGAAGGATGATCTGTCCAGCATCCAGACCCTGGGTA...AGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GTAATGTTCTTGCCTAGCATGTGTGATGTCCTGGGTTCTATTCCCAGCACTGCAAGTTCACGCCTCGTGTaGTACAGATGTTGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VMFLPSMCDVLGSIPSTASSRLV*YRCWTL Trigger: GAGAGTCCAACATCTGTACCACACGAGGCGTGAACT...TGCAGTGCTGGGAATAGAACCCAGGACATCACACATGCTAGGCAAGAACATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTGAAGCGGGACACCTaGTCGGTTAGCGTCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASFQKPSRFLLTFHSSNTLKRDT*SVSVST Trigger: CGTGCTGACGCTAACCGACCAGGTGTCCCGCTTCAA...TGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGATGGATCTCTGACCATCTTCCCTGTCCCTCTACTGTACTCCCACCACGTTTTTGATTGCCTGTaGTGGGGAGATGTACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKDGSLTIFPVPLLYSHHVFDCL*WGDVHV Trigger: TACATGTACATCTCCCCACCACAGGCAATCAAAAAC...GTGGTGGGAGTACAGTAGAGGGACAGGGAAGATGGTCAGAGATCCATCCTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTTGTCCCACTTGGCTCTaGCTCGTTCTTCCTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHVFSAGNQTQDIPCPTWL*LVLPQI Trigger: AATTTGAGGAAGAACGAGCCAGAGCCAAGTGGGACA...AGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTAATTGTAGCACCTGAGAAGTGTAGAAAAAGGATCAGAAGTTCAAGTCCCATTGTTGCAGCGTaGGCTGGAAGGCTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MPVIVAPEKCRKRIRSSSPIVAA*AGRLGK Trigger: TTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGG...ACTTGAACTTCTGATCCTTTTTCTACACTTCTCAGGTGCTACAATTACAGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGTAAGAGATGGTGTTGACACAATGACACATGTTCACAAATCTCCTTTGCTGTGTCCCACTTaGCTCTGGCTCGTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQEVRDGVDTMTHVHKSPLLCPT*LWLVLP Trigger: AGGAAGAACGAGCCAGAGCCAAGTGGGACACAGCAA...AGGAGATTTGTGAACATGTGTCATTGTGTCAACACCATCTCTTACCTCCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CAA 72 bp | CTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTaGACAGTCAGCCCCAAGAACCGGAAAATTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFNVKHFLPQL*TVSPKNRKITK Trigger: CTTTGTAATTTTCCGGTTCTTGGGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTGTTTGTAGCCAAACATaGGCAAGCAGGCATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTGKLLRMFATHSVWGFVCSQT*ASRHSS Trigger: TGAAGAATGCCTGCTTGCCCATGTTTGGCTACAAAC...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CAA 72 bp | GTGCTGGGAATCAAACCCAGGACATTCCTTAACTGCTaGTTCTACTACTGGTCAACATTCCAGCCTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGIKPRTFLNC*FYYWSTFQPPY Trigger: ATAAGGAGGCTGGAATGTTGACCAGTAGTAGAACAAGCAGTTAAGGAATGTCCTGGGTTTGATTCCCAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCTTGGTACCCAGGGTCTaGATGCTGGACAGATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSLVPRV*MLDRSS Trigger: GGATGATCTGTCCAGCATCCAGACCCTGGGTACCAA...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCGGATATCAGGACCCTTaGGACACTCAGGCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSGYQDP*DTQALP Trigger: TGGAAGAGCCTGAGTGTCCCAAGGGTCCTGATATCC...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| 3UTR CAA 72 bp | ACTAAAGCTGGGAATACAGATCAGTTGGTAATGTTCTaGCCTAGCATGTGTGATGTCCTGGGTTCTATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKAGNTDQLVMF*PSMCDVLGSIP Trigger: GGGAATAGAACCCAGGACATCACACATGCTAGGCAAGAACATTACCAACTGATCTGTATTCCCAGCTTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCGTAAACACTAGCAAATaGGATGCGTCATTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSVNTSK*DASFLQ Trigger: CTGGAGGAATGACGCATCCCATTTGCTAGTGTTTAC...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | GGCAGACACACTGGCCACAGAGGCACTCTCCCCGCTGGCTGCAGATaGGCTGGCCCTCCTTGGGGCTGCACTCTTCCTGCTGAGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRHTGHRGTLPAGCR*AGPPWGCTLPAERV Trigger: GACCCTCTCAGCAGGAAGAGTGCAGCCCCAAGGAGGGCCAGCCCATCTGCAGCCAGCGGGGAGAGTGCCTCTGTGGCCAGTGTGTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | TCGCTGCTATGGCAGACACACTGGCCACAGAGGCACTCTCCCCGCTaGCTGCAGATGGGCTGGCCCTCCTTGGGGCTGCACTCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLWQTHWPQRHSPR*LQMGWPSLGLHSSC Trigger: GCAGGAAGAGTGCAGCCCCAAGGAGGGCCAGCCCATCTGCAGCCAGCGGGGAGAGTGCCTCTGTGGCCAGTGTGTCTGCCATAGCAGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 90 bp | GGCACTCTCCCCGCTGGCTGCAGATGGGCTGGCCCTCCTTGGGGCTaGACTCTTCCTGCTGAGAGGGTCGGTAATCCTCCTCAGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GTLPAGCRWAGPPWG*TLPAERVGNPPQST Trigger: AGTGCTCTGAGGAGGATTACCGACCCTCTCAGCAGGAAGAGTGCAGCCCCAAGGAGGGCCAGCCCATCTGCAGCCAGCGGGGAGAGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | CCGTTCCCATTGTTGCAGCGTGGGCTGGAAGGCTGGGCAAAGGCCTaGCAGGCACAGTCACAGTCGAAGGTCACCTGGACGGTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFPLLQRGLEGWAKA*QAQSQSKVTWTVRL Trigger: CAGCCTCACCGTCCAGGTGACCTTCGACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | GCGGCACACCCCACACTCAAAAGTCCCGTTCCCATTGTTGCAGCGTaGGCTGGAAGGCTGGGCAAAGGCCTGGCAGGCACAGTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAHPTLKSPVPIVAA*AGRLGKGLAGTVTV Trigger: GACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTGTGGGGTGTGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | CAGGACTCACAGCCAGACACTGCTGGCAGGAGTTCACGCCTCGTGTaGTACAGATGTTGGACTCTCCAACAACAACGCCCGCCAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSQPDTAGRSSRLV*YRCWTLQQQRPPAP Trigger: GGGCGCTGGCGGGCGTTGTTGTTGGAGAGTCCAACATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | CTTCCTGCTGAGAGGGTCGGTAATCCTCCTCAGAGCACTCACACATaGACCCCAGCCAGCCCTGGTCACAGCGGCACACCCCACACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPAERVGNPPQSTHT*TPASPGHSGTPHTQ Trigger: TTGAGTGTGGGGTGTGCCGCTGTGACCAGGGCTGGCTGGGGTCCATGTGTGAGTGCTCTGAGGAGGATTACCGACCCTCTCAGCAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | CACTCAAAAGTCCCGTTCCCATTGTTGCAGCGTGGGCTGGAAGGCTaGGCAAAGGCCTGGCAGGCACAGTCACAGTCGAAGGTCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSKVPFPLLQRGLEG*AKAWQAQSQSKVTW Trigger: CCAGGTGACCTTCGACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | TGGCCCCCATCACTGACAGCAGGACCACCAGGATATCAGGACCCTTaGGACACTCAGGCTCTTCCACCACATAGAGGACTGCCCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WPPSLTAGPPGYQDP*DTQALPPHRGLPSH Trigger: GTGGGAGGGCAGTCCTCTATGTGGTGGAAGAGCCTGAGTGTCCCAAGGGTCCTGATATCCTGGTGGTCCTGCTGTCAGTGATGGGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACGTTTTCAGTGCTGGGAATCAAACCCAGGACATTCCTCTGCCGCACTCGCAGTaGCCCCGGCCGCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHVFSAGNQTQDIPLPHSQ*PRPLHS Trigger: GCTGTGCAGCGGCCGGGGCAACTGCGAGTGCGGCAG...AGGAATGTCCTGGGTTTGATTCCCAGCACTGAAAACGTGTGTGTGTGTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | GGCTGGGCAAAGGCCTGGCAGGCACAGTCACAGTCGAAGGTCACCTaGACGGTGAGGCTGTCCTTAAAGCCCACAGGCTTGATAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWAKAWQAQSQSKVT*TVRLSLKPTGLIVK Trigger: TTTCACTATCAAGCCTGTGGGCTTTAAGGACAGCCTCACCGTCCAGGTGACCTTCGACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 90 bp | GTCTCATCTGAGCACCAGGCACACACAGGACTCACAGCCAGACACTaGTGGCAGGAGTTCACGCCTCGTGTGGTACAGATGTTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSEHQAHTGLTARH*WQEFTPRVVQMLDS Trigger: AGAGTCCAACATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAGTCCTGTGTGTGCCTGGTGCTCAGATGAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 90 bp | ACGGTGAGGCTGTCCTTAAAGCCCACAGGCTTGATAGTGAAAGACTaGTCCTTCTCCTGGGGGCAGCCACGCACCTTGGCCTCGATACTA | + |
|
Preference number: 5 (lower is better) Translates to: TVRLSLKPTGLIVKD*SFSWGQPRTLASIL Trigger: TAGTATCGAGGCCAAGGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAAGCCTGTGGGCTTTAAGGACAGCCTCACCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | TCATCTGAGCACCAGGCACACACAGGACTCACAGCCAGACACTGCTaGCAGGAGTTCACGCCTCGTGTGGTACAGATGTTGGACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSEHQAHTGLTARHC*QEFTPRVVQMLDSP Trigger: TGGAGAGTCCAACATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAGTCCTGTGTGTGCCTGGTGCTCAGATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCCAAGCTGCTTCCAGAGCCCTaGCTGCTGAGTGGCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFNVKHFLPQLLTVSPKLLPEP*LLSGLA Trigger: GGCTAGGCCACTCAGCAGCAAGGGCTCTGGAAGCAG...CTTGGGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGGTCCCGTTCCCATTGTaGCAGCGTGGGCTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGVPFPL*QRGLEG Trigger: GCCTTCCAGCCCACGCTGCAACAATGGGAACGGGAC...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | TCCTTAAAGCCCACAGGCTTGATAGTGAAAGACTGCTCCTTCTCCTaGGGGCAGCCACGCACCTTGGCCTCGATACTAAAGCTCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLKPTGLIVKDCSFS*GQPRTLASILKLTV Trigger: CACGGTGAGCTTTAGTATCGAGGCCAAGGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAAGCCTGTGGGCTTTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | GGCACGTTGTTCAACAGACTCATGGGAGACTCGGGGGACTCCTTCACAAGACACAGGATATCAGGACCCTaGGGACACTCAGGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTLFNRLMGDSGDSFTRHRISGP*GHSGSS Trigger: GGAAGAGCCTGAGTGTCCCAAGGGTCCTGATATCCT...GTGTCTTGTGAAGGAGTCCCCCGAGTCTCCCATGAGTCTGTTGAACAACGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 90 bp | AAGGCCCCAAAGCCAATCCGAAGGTTGCTAGTAAGCTTGCGCATCTaGGAGGCCAACTTGGTACCCAGGGTCTGGATGCTGGACAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KAPKPIRRLLVSLRI*EANLVPRVWMLDRS Trigger: TGATCTGTCCAGCATCCAGACCCTGGGTACCAAGTTGGCCTCTCAGATGCGCAAGCTTACTAGCAACCTTCGGATTGGCTTTGGGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 90 bp | GCCCGGGATAACCTCGTTGTTGAGGCAGGTGGCATTGAAGGACAGTaGCAGTTCTTCCGGCAGGTCACGTACTTCCAGCTCCACTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARDNLVVEAGGIEGQ*QFFRQVTYFQLHFR Trigger: TCTAAAGTGGAGCTGGAAGTACGTGACCTGCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 90 bp | ATCAGGACCCTTGGGACACTCAGGCTCTTCCACCACATAGAGGACTaGCCTCCCACTGGTGTCTTCGTAGTACTGGAATCTGACGACACA | + |
|
Preference number: 5 (lower is better) Translates to: IRTLGTLRLFHHIED*PPTGVFVVLESDDT Trigger: TGTGTCGTCAGATTCCAGTACTACGAAGACACCAGTGGGAGGGCAGTCCTCTATGTGGTGGAAGAGCCTGAGTGTCCCAAGGGTCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | CTTGCTGCTGAGTGGCCTAGCCTCCAGGATCTGGGCCTCACTGACTaGGAACTCAATAGACTCTGGAGCACAATTGTCCTTCAGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAAEWPSLQDLGLTD*ELNRLWSTIVLQQV Trigger: AACCTGCTGAAGGACAATTGTGCTCCAGAGTCTATTGAGTTCCCAGTCAGTGAGGCCCAGATCCTGGAGGCTAGGCCACTCAGCAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACGGGATAACCTCGTTGTaGAGGCAGGTGGCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HDREPQPIASDHDREPQHGITSL*RQVALK Trigger: CTTCAATGCCACCTGCCTCAACAACGAGGTTATCCC...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGCTGTGGGCAGCTTCAGAATGACTGTCTCTGAGGGAAAGAACGGGCCCGGGATAACCTCGTaGTTGAGGCAGGTGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SDVAVGSFRMTVSEGKNGPGITS*LRQVAL Trigger: CAATGCCACCTGCCTCAACAACGAGGTTATCCCGGG...CCCGTTCTTTCCCTCAGAGACAGTCATTCTGAAGCTGCCCACAGCAACATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | TCATTGGGCAGGACAATGCCTGCCAGCCTTCCATCCAGGGCAATATaGGTCTTGGCATCCGTGGTAAACACTAGCAAATGGGATGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGRTMPASLPSRAI*VLASVVNTSKWDAS Trigger: TGACGCATCCCATTTGCTAGTGTTTACCACGGATGCCAAGACCCATATTGCCCTGGATGGAAGGCTGGCAGGCATTGTCCTGCCCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CATGACAGAGAGCCTCAGCCCATAGCATCTGACCATGACAGAGAGCCTCAGCACAGGGCAATATGGGTCTaGGCATCCGTGGTAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: HDREPQPIASDHDREPQHRAIWV*ASVVNT Trigger: AGTGTTTACCACGGATGCCAAGACCCATATTGCCCT...GTGCTGAGGCTCTCTGTCATGGTCAGATGCTATGGGCTGAGGCTCTCTGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 90 bp | CGACACAGTCATCCTCGTTCTTGTAGGTACAATTCACGGCGTTTTTaGCAGTATCCGTCAGCTCTTTCACCTGCTCGATGTCATCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHSHPRSCRYNSRRF*QYPSALSPARCHPG Trigger: GCCGGGATGACATCGAGCAGGTGAAAGAGCTGACGGATACTGGCAAAAACGCCGTGAATTGTACCTACAAGAACGAGGATGACTGTGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | AGCCTCCAGGATCTGGGCCTCACTGACTGGGAACTCAATAGACTCTaGAGCACAATTGTCCTTCAGCAGGTTCTCCTTCAGGTTACATCG | + |
|
Preference number: 5 (lower is better) Translates to: SLQDLGLTDWELNRL*STIVLQQVLLQVTS Trigger: CGATGTAACCTGAAGGAGAACCTGCTGAAGGACAATTGTGCTCCAGAGTCTATTGAGTTCCCAGTCAGTGAGGCCCAGATCCTGGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGAGCTTCAACGTCAAGCACTTTCTACCACAGCTGTTGACAGTCAGCCCACCGTGTCTCCAATCTaGAGGCCCACACAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAELQRQALSTTAVDSQPTVSPI*RPTQDL Trigger: CAAGTCTTGTGTGGGCCTCAAGATTGGAGACACGGT...GGGCTGACTGTCAACAGCTGTGGTAGAAAGTGCTTGACGTTGAAGCTCAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CGCCCAAGCACCACAAGCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTCGCACTCACAGTACTaGCCAGTGATCTTGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPSTTSLIPETVKIPTHLSHSQY*PVILPK Trigger: CTTCGGCAAGATCACTGGCAAGTACTGTGAGTGCGA...AAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGCTTGTGGTGCTTGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 90 bp | CATAGAGGACTGCCCTCCCACTGGTGTCTTCGTAGTACTGGAATCTaGCGACACAGTCATCCTCGTTCTTGTAGGTACAATTCACGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HRGLPSHWCLRSTGI*RHSHPRSCRYNSRR Trigger: ACGCCGTGAATTGTACCTACAAGAACGAGGATGACTGTGTCGTCAGATTCCAGTACTACGAAGACACCAGTGGGAGGGCAGTCCTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 90 bp | GCAGGCATTCTTCATATTGTAACAGGGGTTTTTGATTGCCTGTGGTaGGGAGATGTACATGTACGGCGATACAGGCTTGTCCACGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGILHIVTGVFDCLW*GDVHVRRYRLVHEG Trigger: GCCTTCGTGGACAAGCCTGTATCGCCGTACATGTACATCTCCCCACCACAGGCAATCAAAAACCCCTGTTACAATATGAAGAATGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTGACTCTGGAGCACAATaGTCCTTCAGCAGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLTGKLLRMFATHSVWGFDSGAQ*SFSRFS Trigger: GGAGAACCTGCTGAAGGACAATTGTGCTCCAGAGTC...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGACTGGCAAGTTACTAAGAATGTTTGCCACACACTCTGTGTGGGGTTTTAAGCCAATCCGAAGGTaGCTAGTAAGCTTGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PLTGKLLRMFATHSVWGFKPIRR*LVSLRI Trigger: GATGCGCAAGCTTACTAGCAACCTTCGGATTGGCTT...AAAACCCCACACAGAGTGTGTGGCAAACATTCTTAGTAACTTGCCAGTCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGTAATTGTAGCACCTGAGAAGTGTAGAAAAAGGATCAGAAGTTCAAGTCTGCACAGCAGCCCATaGGTGGACATGCAGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MPVIVAPEKCRKRIRSSSLHSSP*VDMQVS Trigger: TGACACCTGCATGTCCACCAATGGGCTGCTGTGCAG...ACTTGAACTTCTGATCCTTTTTCTACACTTCTCAGGTGCTACAATTACAGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATATACAGCGGGTTGTTaGCTGTGTCCCACTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASFQKPSRFLLTFHSSNTYTAGC*LCPTWL Trigger: GAGCCAAGTGGGACACAGCAAACAACCCGCTGTATA...TGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCATTCCAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTGAGGCAGGTGGCATaGAAGGACAGTGACAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASFQKPSRFLLTFHSSNTLRQVA*KDSDSS Trigger: AGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAA...TGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTGGAATGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGTAATTGTAGCACCTGAGAAGTGTAGAAAAAGGATCAGAAGTTCAAGTTGGAGCGTTCCCCGGTaGAACTTCTTACACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MPVIVAPEKCRKRIRSSSWSVPR*NFLHST Trigger: TGTGGAGTGTAAGAAGTTCAACCGGGGAACGCTCCA...ACTTGAACTTCTGATCCTTTTTCTACACTTCTCAGGTGCTACAATTACAGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS-3UTR CAA 90 bp | CAGAAACCGTCAAGATTCCTACTCACCTTTCACTCTTCTAATACATTTTCTTCCTTCTTCACTTCTTCATaGAAGCGGGACACCTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QKPSRFLLTFHSSNTFSSFFTSS*KRDTWS Trigger: CGACCAGGTGTCCCGCTTCAATGAAGAAGTGAAGAA...GGAAGAAAATGTATTAGAAGAGTGAAAGGTGAGTAGGAATCTTGACGGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | ACTCTCCCCGCTGGCTGCAGATGGGCTGGCCCTCCTTaGGGCTGCACTCTTCCTGCTGAGAGGGTCGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLPAGCRWAGPP*GCTLPAERVGN Trigger: ATTACCGACCCTCTCAGCAGGAAGAGTGCAGCCCCAAGGAGGGCCAGCCCATCTGCAGCCAGCGGGGAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | CCCTGGTCACAGCGGCACACCCCACACTCAAAAGTCCCGTTCCCATaGTTGCAGCGTGGGCTGGAAGGCTGGGCAAAGGCCTGGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWSQRHTPHSKVPFP*LQRGLEGWAKAWQA Trigger: TGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTGTGGGGTGTGCCGCTGTGACCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 72 bp | GGCACACCCCACACTCAAAAGTCCCGTTCCCATTGTTaGAGCGTGGGCTGGAAGGCTGGGCAAAGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTPHTQKSRSHC*SVGWKAGQRPG Trigger: GCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTGTGGGGTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | TTGTTGCAGCGTGGGCTGGAAGGCTGGGCAAAGGCCTaGCAGGCACAGTCACAGTCGAAGGTCACCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LLQRGLEGWAKA*QAQSQSKVTWT Trigger: CGTCCAGGTGACCTTCGACTGTGACTGTGCCTGCCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | GGTGGGGCACTTCTCACAGGTGTCTCCATAGGAGCCTaGCTGGACGCACACACAGCTGCCGCACTCGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGALLTGVSIGA*LDAHTAAALAV Trigger: AACTGCGAGTGCGGCAGCTGTGTGTGCGTCCAGCCAGGCTCCTATGGAGACACCTGTGAGAAGTGCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | CGGCACACCCCACACTCAAAAGTCCCGTTCCCATTGTaGCAGCGTGGGCTGGAAGGCTGGGCAAAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RHTPHSKVPFPL*QRGLEGWAKAW Trigger: CCAGGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTGTGGGGTGTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | CAGCGGCACACCCCACACTCAAAAGTCCCGTTCCCATaGTTGCAGCGTGGGCTGGAAGGCTGGGCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QRHTPHSKVPFP*LQRGLEGWAKA Trigger: GGCCTTTGCCCAGCCTTCCAGCCCACGCTGCAACAATGGGAACGGGACTTTTGAGTGTGGGGTGTGCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 72 bp | GAGCACCAGGCACACACAGGACTCACAGCCAGACACTaGTGGCAGGAGTTCACGCCTCGTGTGGTACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EHQAHTGLTARH*WQEFTPRVVQM Trigger: CATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAGTCCTGTGTGTGCCTGGTGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | CAGTACTTGCCAGTGATCTTGCCGAAGTCGCTGCTATaGCAGACACACTGGCCACAGAGGCACTCTCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QYLPVILPKSLL*QTHWPQRHSPR Trigger: GCGGGGAGAGTGCCTCTGTGGCCAGTGTGTCTGCCATAGCAGCGACTTCGGCAAGATCACTGGCAAGTACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | TCGAAGGTCACCTGGACGGTGAGGCTGTCCTTAAAGCCCACAGGCTaGATAGTGAAAGACTGCTCCTTCTCCTGGGGGCAGCCACGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SKVTWTVRLSLKPTG*IVKDCSFSWGQPRT Trigger: GGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAAGCCTGTGGGCTTTAAGGACAGCCTCACCGTCCAGGTGACCTTCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 72 bp | CTGTCCTTAAAGCCCACAGGCTTGATAGTGAAAGACTaGTCCTTCTCCTGGGGGCAGCCACGCACCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLKPTGLIVKD*SFSWGQPRTLA Trigger: GGCCAAGGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAAGCCTGTGGGCTTTAAGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | CAGCCAGACACTGCTGGCAGGAGTTCACGCCTCGTGTaGTACAGATGTTGGACTCTCCAACAACAACGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QPDTAGRSSRLV*YRCWTLQQQRP Trigger: CGGGCGTTGTTGTTGGAGAGTCCAACATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | CACCAGGCACACACAGGACTCACAGCCAGACACTGCTaGCAGGAGTTCACGCCTCGTGTGGTACAGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HQAHTGLTARHC*QEFTPRVVQML Trigger: CAACATCTGTACCACACGAGGCGTGAACTCCTGCCAGCAGTGTCTGGCTGTGAGTCCTGTGTGTGCCTGGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | CCAGTCCGAGTCACACACGCAGTCCCCACAGTTACATaGCCCATGGCCGGAACACATCTCCCCTTTGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PVRVTHAVPTVT*PMAGTHLPFVA Trigger: CGCTACAAAGGGGAGATGTGTTCCGGCCATGGGCAATGTAACTGTGGGGACTGCGTGTGTGACTCGGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | CCCACAGGCTTGATAGTGAAAGACTGCTCCTTCTCCTaGGGGCAGCCACGCACCTTGGCCTCGATACTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PTGLIVKDCSFS*GQPRTLASILK Trigger: CTTTAGTATCGAGGCCAAGGTGCGTGGCTGCCCCCAGGAGAAGGAGCAGTCTTTCACTATCAAGCCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | AGGCCCGGGATAACCTCGTTGTTGAGGCAGGTGGCATaGAAGGACAGTGACAGTTCTTCCGGCAGGTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: RPGITSLLRQVA*KDSDSSSGRSR Trigger: ACGTGACCTGCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | CTCACCGTGTCTCCAATCTTGAGGCCCACACAAGACTaGAGGCCCGGGATAACCTCGTTGTTGAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTVSPILRPTQD*RPGITSLLRQV Trigger: CACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCTCAAGATTGGAGACACGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | CAAGACTTGAGGCCCGGGATAACCTCGTTGTTGAGGCAGGTGGCATaGAAGGACAGTGACAGTTCTTCCGGCAGGTCACGTACTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QDLRPGITSLLRQVA*KDSDSSSGRSRTSS Trigger: GCTGGAAGTACGTGACCTGCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | ATCTTGAGGCCCACACAAGACTTGAGGCCCGGGATAACCTCGTTGTaGAGGCAGGTGGCATTGAAGGACAGTGACAGTTCTTCCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILRPTQDLRPGITSL*RQVALKDSDSSSGR Trigger: CCTGCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCTCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | CCAATCTTGAGGCCCACACAAGACTTGAGGCCCGGGATAACCTCGTaGTTGAGGCAGGTGGCATTGAAGGACAGTGACAGTTCTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PILRPTQDLRPGITS*LRQVALKDSDSSSG Trigger: GCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCTCAAGATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | AGGCCCACACAAGACTTGAGGCCCGGGATAACCTCGTaGTTGAGGCAGGTGGCATTGAAGGACAGTGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPTQDLRPGITS*LRQVALKDSDS Trigger: ACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | GGCAGGACAATGCCTGCCAGCCTTCCATCCAGGGCAATATGGGTCTaGGCATCCGTGGTAAACACTAGCAAATGGGATGCGTCATTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRTMPASLPSRAIWV*ASVVNTSKWDASFL Trigger: GAGGAATGACGCATCCCATTTGCTAGTGTTTACCACGGATGCCAAGACCCATATTGCCCTGGATGGAAGGCTGGCAGGCATTGTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 72 bp | AAGCCAATCCGAAGGTTGCTAGTAAGCTTGCGCATCTaGGAGGCCAACTTGGTACCCAGGGTCTGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPIRRLLVSLRI*EANLVPRVWML Trigger: CAGCATCCAGACCCTGGGTACCAAGTTGGCCTCTCAGATGCGCAAGCTTACTAGCAACCTTCGGATTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 72 bp | AACCTCGTTGTTGAGGCAGGTGGCATTGAAGGACAGTaGCAGTTCTTCCGGCAGGTCACGTACTTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NLVVEAGGIEGQ*QFFRQVTYFQL Trigger: GAGCTGGAAGTACGTGACCTGCCGGAAGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS GCA 72 bp | CTTGGGACACTCAGGCTCTTCCACCACATAGAGGACTaGCCTCCCACTGGTGTCTTCGTAGTACTGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LGTLRLFHHIED*PPTGVFVVLES Trigger: AGATTCCAGTACTACGAAGACACCAGTGGGAGGGCAGTCCTCTATGTGGTGGAAGAGCCTGAGTGTCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | ATGCCTGCCAGCCTTCCATCCAGGGCAATATGGGTCTaGGCATCCGTGGTAAACACTAGCAAATGGGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: MPASLPSRAIWV*ASVVNTSKWDA Trigger: CGCATCCCATTTGCTAGTGTTTACCACGGATGCCAAGACCCATATTGCCCTGGATGGAAGGCTGGCAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | CCCACACAAGACTTGAGGCCCGGGATAACCTCGTTGTaGAGGCAGGTGGCATTGAAGGACAGTGACAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PTQDLRPGITSL*RQVALKDSDSS Trigger: AGAACTGTCACTGTCCTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 72 bp | TTGGCCTCGATACTAAAGCTCACCGTGTCTCCAATCTaGAGGCCCACACAAGACTTGAGGCCCGGGATAACC | + |
|
Preference number: 6 (lower is better) Translates to: LASILKLTVSPI*RPTQDLRPGIT Trigger: GGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCTCAAGATTGGAGACACGGTGAGCTTTAGTATCGAGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | ATCTGGGCCTCACTGACTGGGAACTCAATAGACTCTGGAGCACAATaGTCCTTCAGCAGGTTCTCCTTCAGGTTACATCGGGGTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: IWASLTGNSIDSGAQ*SFSRFSFRLHRGEP Trigger: GGGCTCACCCCGATGTAACCTGAAGGAGAACCTGCTGAAGGACAATTGTGCTCCAGAGTCTATTGAGTTCCCAGTCAGTGAGGCCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | TTGATTGCCTGTGGTGGGGAGATGTACATGTACGGCGATACAGGCTaGTCCACGAAGGCCCCAAAGCCAATCCGAAGGTTGCTAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LIACGGEMYMYGDTG*STKAPKPIRRLLVS Trigger: GCTTACTAGCAACCTTCGGATTGGCTTTGGGGCCTTCGTGGACAAGCCTGTATCGCCGTACATGTACATCTCCCCACCACAGGCAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | AGGACAATGCCTGCCAGCCTTCCATCCAGGGCAATATaGGTCTTGGCATCCGTGGTAAACACTAGCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: RTMPASLPSRAI*VLASVVNTSKW Trigger: CCATTTGCTAGTGTTTACCACGGATGCCAAGACCCATATTGCCCTGGATGGAAGGCTGGCAGGCATTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CAA 90 bp | ATACTAAAGCTCACCGTGTCTCCAATCTTGAGGCCCACACAAGACTaGAGGCCCGGGATAACCTCGTTGTTGAGGCAGGTGGCATTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ILKLTVSPILRPTQD*RPGITSLLRQVALK Trigger: CTTCAATGCCACCTGCCTCAACAACGAGGTTATCCCGGGCCTCAAGTCTTGTGTGGGCCTCAAGATTGGAGACACGGTGAGCTTTAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | GATCTGGGCCTCACTGACTGGGAACTCAATAGACTCTaGAGCACAATTGTCCTTCAGCAGGTTCTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLGLTDWELNRL*STIVLQQVLLQ Trigger: CTGAAGGAGAACCTGCTGAAGGACAATTGTGCTCCAGAGTCTATTGAGTTCCCAGTCAGTGAGGCCCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS TCA 72 bp | CTGCCCTCCCACTGGTGTCTTCGTAGTACTGGAATCTaGCGACACAGTCATCCTCGTTCTTGTAGGTACAAT | + |
|
Preference number: 6 (lower is better) Translates to: LPSHWCLRSTGI*RHSHPRSCRYN Trigger: ATTGTACCTACAAGAACGAGGATGACTGTGTCGTCAGATTCCAGTACTACGAAGACACCAGTGGGAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
||
| CDS CCA 72 bp | GGTCGGTTAGCGTCAGCACGTGTTTGTAGCCAAACATaGGCAAGCAGGCATTCTTCATATTGTAACAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GRLASARVCSQT*ASRHSSYCNRG Trigger: ACCCCTGTTACAATATGAAGAATGCCTGCTTGCCCATGTTTGGCTACAAACACGTGCTGACGCTAACCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| CDS CAA 72 bp | CGGCTGCAGGTGTTTTCTTCATGGAGCGTTCCCCGGTaGAACTTCTTACACTCCACACACTCCTTCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RLQVFSSWSVPR*NFLHSTHSFLK Trigger: CTTTAAGAAGGAGTGTGTGGAGTGTAAGAAGTTCAACCGGGGAACGCTCCATGAAGAAAACACCTGCAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| CDS GCA 72 bp | CATCCTCGTTCTTGTAGGTACAATTCACGGCGTTTTTaGCAGTATCCGTCAGCTCTTTCACCTGCTCGATGT | + |
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Preference number: 6 (lower is better) Translates to: HPRSCRYNSRRF*QYPSALSPARC Trigger: ACATCGAGCAGGTGAAAGAGCTGACGGATACTGGCAAAAACGCCGTGAATTGTACCTACAAGAACGAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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| CDS CCA 72 bp | CTTCATATTGTAACAGGGGTTTTTGATTGCCTGTGGTaGGGAGATGTACATGTACGGCGATACAGGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LHIVTGVFDCLW*GDVHVRRYRLV Trigger: GACAAGCCTGTATCGCCGTACATGTACATCTCCCCACCACAGGCAATCAAAAACCCCTGTTACAATATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021028.5 |
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