Pregenerated sensors for ITGB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000290Ensembl transcript IDs: ENSMUST00000000299.14, ENSMUST00000153541.2, ENSMUST00000156644.8
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GACCCAAAGCCGATGCGGCCAGACTCGGTGATCTCGTTGAGGGCCTaGAGCAAGTCCCCGCCCAGCTTCTTGACGTTGTTGAGGTCATCA | + |
Preference number: 1 (lower is better) Translates to: DPKPMRPDSVISLRA*SKSPPSFLTLLRSS Trigger: TGATGACCTCAACAACGTCAAGAAGCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTCTGGCCGCATCGGCTTTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 90 bp | GGGGTCCATGATATCATCGGCTGGACAACCCTTCAGCAGCAGCTGTaGCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCCTGGTCCAGT | + |
Preference number: 1 (lower is better) Translates to: GVHDIIGWTTLQQQL*PCVTAQGVRFSWSS Trigger: ACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACACACGGGCACAGCTGCTGCTGAAGGGTTGTCCAGCCGATGATATCATGGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 90 bp | TGGTGGACCTCTGACACTGGCAGGCCGAGCCCTCGTAACCGGGCTTaGAACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTT | + |
Preference number: 1 (lower is better) Translates to: WWTSDTGRPSPRNRA*NYICHSCRNPDRVV Trigger: AACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGCCCGGTTACGAGGGCTCGGCCTGCCAGTGTCAGAGGTCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 90 bp | GGAGGACACCAATCAGTACGACACCTACCACGGTGCCCCCTACGATaGCAGCCACATTGGGGCCCTTCACACACTCTAGACTGTCCTCCA | + |
Preference number: 1 (lower is better) Translates to: GGHQSVRHLPRCPLR*QPHWGPSHTLDCPP Trigger: TGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTGGTGTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 90 bp | ACTCGGCACAAGAGGTGTGGTTGTCCCTGCAGTGCGAGCCACAGCTaGGACAATCCTCACACATCGGTGGCTGGTAGCCTTCGTCACATA | + |
Preference number: 1 (lower is better) Translates to: TRHKRCGCPCSASHS*DNPHTSVAGSLRHI Trigger: TATGTGACGAAGGCTACCAGCCACCGATGTGTGAGGATTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR TCA 90 bp | GCTTGCCGACCTCTGTCTGAAACTGGTTGGAGTTGTCGGTTAACTTaGGCACGTGCCGAAAGGCAAATGGGGGCTGGCAGGCCTTCTCCT | + |
Preference number: 1 (lower is better) Translates to: ACRPLSETGWSCRLT*ARAERQMGAGRPSP Trigger: AGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCACGTGCTCAAGTTAACCGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 90 bp | CCTTATCAAACTTCAGGCACTCGGCACAAGAGGTGTGGTTGTCCCTaGAGTGCGAGCCACAGCTGGGACAATCCTCACACATCGGTGGCT | + |
Preference number: 1 (lower is better) Translates to: PYQTSGTRHKRCGCP*SASHSWDNPHTSVA Trigger: AGCCACCGATGTGTGAGGATTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGTGCCTGAAGTTTGATAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 90 bp | TCAGTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCACATTaGGGCCCTTCACACACTCTAGACTGTCCTCCACATGGATGTTGT | + |
Preference number: 1 (lower is better) Translates to: SVRHLPRCPLRWQPH*GPSHTLDCPPHGCC Trigger: ACAACATCCATGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 90 bp | GAACTCAGGATTAGCGATGCTCCTGGGGTCCATGATATCATCGGCTaGACAACCCTTCAGCAGCAGCTGTGCCCGTGTGTCACAGCGCAA | + |
Preference number: 1 (lower is better) Translates to: ELRISDAPGVHDIIG*TTLQQQLCPCVTAQ Trigger: TTGCGCTGTGACACACGGGCACAGCTGCTGCTGAAGGGTTGTCCAGCCGATGATATCATGGACCCCAGGAGCATCGCTAATCCTGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 90 bp | GAGTTGTCGGTTAACTTGAGCACGTGCCGAAAGGCAAATGGGGGCTaGCAGGCCTTCTCCTTGTTGGGACATGGGTTCCTCAGCTTCTCA | + |
Preference number: 1 (lower is better) Translates to: ELSVNLSTCRKANGG*QAFSLLGHGFLSFS Trigger: TGAGAAGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCACGTGCTCAAGTTAACCGACAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR TCA 90 bp | GGGGCGTCCAGGTTTCCGGAAATCAGTTGCTTGCCGACCTCTGTCTaGAACTGGTTGGAGTTGTCGGTTAACTTGAGCACGTGCCGAAAG | + |
Preference number: 1 (lower is better) Translates to: GASRFPEISCLPTSV*NWLELSVNLSTCRK Trigger: CTTTCGGCACGTGCTCAAGTTAACCGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAACCTGGACGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 90 bp | TGTCACCGCAAAGATGGGCTGGATGTTGCTCTCGGAAAGTTTGTGTaGCAGCTGACCCACGGATGGGTAGTCGAACTCATTGCTCCTCTT | + |
Preference number: 1 (lower is better) Translates to: CHRKDGLDVALGKFV*QLTHGWVVELIAPL Trigger: AAGAGGAGCAATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCACACAAACTTTCCGAGAGCAACATCCAGCCCATCTTTGCGGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR TCA 90 bp | TTGCAACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTTaGTCTGTACGCCATCACAGTCCCCACGGGATTTGCCTATACTCG | + |
Preference number: 1 (lower is better) Translates to: LQLHLPQLQEPRSGC*SVRHHSPHGICLYS Trigger: CGAGTATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 90 bp | CCTGGCAGACTTGATATAATGGCGGAAAGAAACCGAGCAGGCTTTTaGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTT | + |
Preference number: 1 (lower is better) Translates to: PGRLDIMAERNRAGF*ILGSTGVSCKPRCV Trigger: AACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCATTATATCAAGTCTGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR TCA 90 bp | AGTACAGATCAATGGGGTATCCCTTGGCCCGCCGGAAAGTCACATTaGATGCGGCAGCCTGTCCTGGTCGCAAGTAAAGTGTCACTTTTT | + |
Preference number: 1 (lower is better) Translates to: STDQWGIPWPAGKSH*MRQPVLVASKVSLF Trigger: AAAAAGTGACACTTTACTTGCGACCAGGACAGGCTGCCGCATTCAATGTGACTTTCCGGCGGGCCAAGGGATACCCCATTGATCTGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 90 bp | GATCTGTACGCCATCACAGTCCCCACGGGATTTGCCTATACTCGATaGTCCATTACTGCAGAAGGAGTCATAGGTGACTTTCAGGGTGTC | + |
Preference number: 1 (lower is better) Translates to: DLYAITVPTGFAYTR*SITAEGVIGDFQGV Trigger: GACACCCTGAAAGTCACCTATGACTCCTTCTGCAGTAATGGAGCATCGAGTATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 90 bp | CTGGATGTTGCTCTCGGAAAGTTTGTGTGCCAGCTGACCCACGGATaGGTAGTCGAACTCATTGCTCCTCTTGTACATGTTATCCTCCAG | + |
Preference number: 1 (lower is better) Translates to: LDVALGKFVCQLTHG*VVELIAPLVHVILQ Trigger: CTGGAGGATAACATGTACAAGAGGAGCAATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCACACAAACTTTCCGAGAGCAACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 90 bp | ACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTaGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAA | + |
Preference number: 1 (lower is better) Translates to: TFTETAVFLYARKCG*NLLGLGTILRALRQ Trigger: TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | GCGGCCAGACTCGGTGATCTCGTTGAGGGCCTGCAGCAAGTCCCCGCCCAGCTTGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCTAGGC | + |
Preference number: 2 (lower is better) Translates to: AARLGDLVEGLQQVPAQLGVRFS*SSEVLG Trigger: GCCTAGAACTTCACTGGACCAGGAGAACCTGACTCC...AAGCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTCTGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 90 bp | TCCACAAACGACCCAAAGCCGATGCGGCCAGACTCGGTGATCTCGTaGAGGGCCTGCAGCAAGTCCCCGCCCAGCTTCTTGACGTTGTTG | + |
Preference number: 2 (lower is better) Translates to: STNDPKPMRPDSVIS*RACSKSPPSFLTLL Trigger: CAACAACGTCAAGAAGCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTCTGGCCGCATCGGCTTTGGGTCGTTTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | AGCCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGAAGCCACGTTGTGTTTaGAGAGGGGAGGAGGCGTGG | + |
Preference number: 2 (lower is better) Translates to: SHVVFAEGRRRGLRGSHLKPRCV*RGEEAW Trigger: CCACGCCTCCTCCCCTCTGCAAACACAACGTGGCTT...CAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAGGTGTGGTTGTCCCTaGAGTGCGAGCCACAGCTGG | + |
Preference number: 2 (lower is better) Translates to: AERNRAGFWILGSTGVSCRCGCP*SASHSW Trigger: CCAGCTGTGGCTCGCACTGCAGGGACAACCACACCT...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 90 bp | ACACATCGGTGGCTGGTAGCCTTCGTCACATATGCACCTGTTGCATaGGCAGTGGCCACGGCCACTGCACTCTACCAGCCGTGCATTCAG | + |
Preference number: 2 (lower is better) Translates to: THRWLVAFVTYAPVA*AVATATALYQPCIQ Trigger: CTGAATGCACGGCTGGTAGAGTGCAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCATATGTGACGAAGGCTACCAGCCACCGATGTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | CTTGCATTATGGCATCCAGCCCACCCTCAGGGGCGTCCAGGTTTCCGGAAATCAATGCACCTGTTGCATTaGCAGTGGCCACGGCCACTG | + |
Preference number: 2 (lower is better) Translates to: LALWHPAHPQGRPGFRKSMHLLH*QWPRPL Trigger: CAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCAT...TGATTTCCGGAAACCTGGACGCCCCTGAGGGTGGGCTGGATGCCATAATGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | AGCCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTCCTTGTTGGGACATaGGTTCCTCAGCTTCTCAGG | + |
Preference number: 2 (lower is better) Translates to: SHVVFAEGRRRGLRGSHLLLVGT*VPQLLR Trigger: CCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAG...CAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 90 bp | ATCAGTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCACATaGGGGCCCTTCACACACTCTAGACTGTCCTCCACATGGATGTTG | + |
Preference number: 2 (lower is better) Translates to: ISTTPTTVPPTMAAT*GPFTHSRLSSTWML Trigger: CAACATCCATGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR TCA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTTTGGCAGCACTGGGGTaGGCTGTAAGCCACGTTGTG | + |
Preference number: 2 (lower is better) Translates to: GWNLLGLGTILRALRQDCLAALG*AVSHVV Trigger: CACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAA...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTAAGCCACGTTGTGTTTaGAGAGGGGAGGAGGCGTGG | + |
Preference number: 2 (lower is better) Translates to: GWNLLGLGTILRALRQDCKPRCV*RGEEAW Trigger: CCACGCCTCCTCCCCTCTGCAAACACAACGTGGCTT...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTCTGTTGCATTGGCAGTaGCCACGGCCACTGCACTCT | + |
Preference number: 2 (lower is better) Translates to: GWNLLGLGTILRALRQDCLLHWQ*PRPLHS Trigger: AGAGTGCAGTGGCCGTGGCCACTGCCAATGCAACAG...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 90 bp | AAAGGGCCCTTATCAAACTTCAGGCACTCGGCACAAGAGGTGTGGTaGTCCCTGCAGTGCGAGCCACAGCTGGGACAATCCTCACACATC | + |
Preference number: 2 (lower is better) Translates to: KGPLSNFRHSAQEVW*SLQCEPQLGQSSHI Trigger: GATGTGTGAGGATTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGTGCCTGAAGTTTGATAAGGGCCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 90 bp | TTGAGCACGTGCCGAAAGGCAAATGGGGGCTGGCAGGCCTTCTCCTaGTTGGGACATGGGTTCCTCAGCTTCTCAGGATGGGTGTTAACA | + |
Preference number: 2 (lower is better) Translates to: LSTCRKANGGWQAFS*LGHGFLSFSGWVLT Trigger: TGTTAACACCCATCCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCACGTGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | AATCAGTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCACATTGGGGCCTTCAAAGGGATAGTCTaGAGCGTCATACCAGCACAC | + |
Preference number: 2 (lower is better) Translates to: NQYDTYHGAPYDGSHIGAFKGIV*SVIPAH Trigger: GTGTGCTGGTATGACGCTGCAGACTATCCCTTTGAA...GGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | ATGACCAGGAGGAGGACACCAATCAGTACGACACCTACCACGGTGCCCCCTACGGCTTGCAACTACATTTaGCACAGTTGCAGGAACCCC | + |
Preference number: 2 (lower is better) Translates to: MTRRRTPISTTPTTVPPTACNYI*HSCRNP Trigger: GGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGC...CGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTGGTGTCCTCCTCCTGGTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | TGCAACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTTGATCTGTACGGCAGCGGCCATCATTaGGGGTCAGGATGGCACCCA | + |
Preference number: 2 (lower is better) Translates to: CNYICHSCRNPDRVVDLYGSGHH*GSGWHP Trigger: TGGGTGCCATCCTGACCCCCAATGATGGCCGCTGCC...GTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 90 bp | TTCCTCAGCTTCTCAGGATGGGTGTTAACAAAAGGCAGCACCGTCTaGTCCACAAACGACCCAAAGCCGATGCGGCCAGACTCGGTGATC | + |
Preference number: 2 (lower is better) Translates to: FLSFSGWVLTKGSTV*STNDPKPMRPDSVI Trigger: GATCACCGAGTCTGGCCGCATCGGCTTTGGGTCGTTTGTGGACAAGACGGTGCTGCCTTTTGTTAACACCCATCCTGAGAAGCTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR TCA 90 bp | AAAGTTTGTGTGCCAGCTGACCCACGGATGGGTAGTCGAACTCATTGCTCCTCTTTGGCAGCACTGGGGTaGGCTGTAAGCCACGTTGTG | + |
Preference number: 2 (lower is better) Translates to: KVCVPADPRMGSRTHCSSLAALG*AVSHVV Trigger: CACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAA...AGAGGAGCAATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCACACAAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | CGTCACATATGCACCTGTTGCATTGGCAGTGGCCACGGCCACTGCACTCTACCACAATTCTTAGGGCTCTaGGGCAAGATTGTGCAGGTC | + |
Preference number: 2 (lower is better) Translates to: RHICTCCIGSGHGHCTLPQFLGL*GKIVQV Trigger: GACCTGCACAATCTTGCCGCAGAGCCCTAAGAATTG...TGGTAGAGTGCAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCATATGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | CACGGATGGGTAGTCGAACTCATTGCTCCTCTTGTACATGTTATCCTCCAGGTGGTGCCGAAAGGCAAATaGGGGCTGGCAGGCCTTCTC | + |
Preference number: 2 (lower is better) Translates to: HGWVVELIAPLVHVILQVVPKGK*GLAGLL Trigger: GAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCAC...CACCTGGAGGATAACATGTACAAGAGGAGCAATGAGTTCGACTACCCATCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 90 bp | GGGCTTGCAACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTaGTTGATCTGTACGCCATCACAGTCCCCACGGGATTTGCCTATA | + |
Preference number: 2 (lower is better) Translates to: GLATTFATVAGTPIG*LICTPSQSPRDLPI Trigger: TATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR TCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGATCAGGGCCTTCCAGATaGCCAGGAGGAGGACACCAA | + |
Preference number: 2 (lower is better) Translates to: VGRQVPGNPGRLDIMAERSGPSR*PGGGHQ Trigger: TTGGTGTCCTCCTCCTGGTCATCTGGAAGGCCCTGA...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR GCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGATGGTTGTCCCTGCAGTaGGAGCCACAGCTGGGACAA | + |
Preference number: 2 (lower is better) Translates to: VGRQVPGNPGRLDIMAERWLSLQ*EPQLGQ Trigger: TTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCA...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 90 bp | CTTGCAACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTaGATCTGTACGCCATCACAGTCCCCACGGGATTTGCCTATACTC | + |
Preference number: 2 (lower is better) Translates to: LATTFATVAGTPIGL*ICTPSQSPRDLPIL Trigger: GAGTATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR TCA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGTGGGGCCACCTTTACTaGGACTGCTGTCTTCCTTTA | + |
Preference number: 2 (lower is better) Translates to: ERNRAGFWILGSTGVSCKWGHLY*DCCLPL Trigger: TAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCA...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR TCA 90 bp | ATCCAACAGCCTTCCGAGTCCCTCTCCTTGCAGGGCTTTTTCTTCAAAGGGATAGTTCTCCTGGTCCAGTaGAGTTCTAGGCCAGTGGGA | + |
Preference number: 2 (lower is better) Translates to: IQQPSESLSLQGFFFKGIVLLVQ*SSRPVG Trigger: TCCCACTGGCCTAGAACTTCACTGGACCAGGAGAAC...TATCCCTTTGAAGAAAAAGCCCTGCAAGGAGAGGGACTCGGAAGGCTGTTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | GTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGTGTACTGAGGTCAGTCAGGTaGGTCAGGGCCTTCCAGATG | + |
Preference number: 2 (lower is better) Translates to: VLHMDVVNVPSVLLLQSVLRSVR*VRAFQM Trigger: CATCTGGAAGGCCCTGACCCACCTGACTGACCTCAG...TACACTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | CTAGACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCATGCGGCAGCCTGTCCTaGTCGCAAGTAAAGTGTCAC | + |
Preference number: 2 (lower is better) Translates to: LDCPPHGCCKCSFRPSAACGSLS*SQVKCH Trigger: GTGACACTTTACTTGCGACCAGGACAGGCTGCCGCA...TGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR CAA 90 bp | GAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTaGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTGCA | + |
Preference number: 2 (lower is better) Translates to: ETAVFLYARKCGWNL*GLGTILRALRQDCA Trigger: TGCACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR TCA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTGCCGACCTCTGTCTaGAACTGGTTGGAGTTGTCG | + |
Preference number: 2 (lower is better) Translates to: LSSFMQENVGGTSWDSGQLPTSV*NWLELS Trigger: CGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAA...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR CCA 90 bp | GACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGCAGCAACTTGCATTATaGCATCCAGCCCACCCTCAG | + |
Preference number: 2 (lower is better) Translates to: DCPPHGCCKCSFRPSAAKQQLAL*HPAHPQ Trigger: CTGAGGGTGGGCTGGATGCCATAATGCAAGTTGCTG...CTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR GCA 90 bp | GGCCCTTCACACACTCTAGACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCAATTCTTAGGGCTCTaGGGCAAGATTGTGCAGGTC | + |
Preference number: 2 (lower is better) Translates to: GPSHTLDCPPHGCCKCSFQFLGL*GKIVQV Trigger: GACCTGCACAATCTTGCCGCAGAGCCCTAAGAATTG...GAAGGAACATTTACAACATCCATGTGGAGGACAGTCTAGAGTGTGTGAAGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR GCA 90 bp | GGGGGTCACATCTGCTTGATTATGATAACTCATGCTCTAGCTTTCAGCAAACTTTGGTTGTCCCTGCAGTaGGAGCCACAGCTGGGACAA | + |
Preference number: 2 (lower is better) Translates to: GGHICLIMITHALAFSKLWLSLQ*EPQLGQ Trigger: TTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCA...AAGTTTGCTGAAAGCTAGAGCATGAGTTATCATAATCAAGCAGATGTGACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR GCA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACCCGAGTCCCTCTCCTTaGAGGGCTTTTTCTTCAAAG | + |
Preference number: 2 (lower is better) Translates to: LRLLSSFMQENVGGTSWDPSPSP*RAFSSK Trigger: CTTTGAAGAAAAAGCCCTGCAAGGAGAGGGACTCGG...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR CCA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTCTCAGCTTCTCAGGATaGGTGTTAACAAAAGGCAGC | + |
Preference number: 2 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVLSFSG*VLTKGS Trigger: GCTGCCTTTTGTTAACACCCATCCTGAGAAGCTGAG...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR TCA 90 bp | GGGGGTCACATCTGCTTGATTATGATAACTCATGCTCTAGCTTTCAGCAAACTTTGCTCCTGGGGTCCATaGTATCATCGGCTGGACAAC | + |
Preference number: 2 (lower is better) Translates to: GGHICLIMITHALAFSKLCSWGP*YHRLDN Trigger: GTTGTCCAGCCGATGATATCATGGACCCCAGGAGCA...AAGTTTGCTGAAAGCTAGAGCATGAGTTATCATAATCAAGCAGATGTGACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CCA 90 bp | GGGGGTCACATCTGCTTGATTATGATAACTCATGCTCTAGCTTTCAGCAAACTTAGGCCTTCTCCTTGTTaGGACATGGGTTCCTCAGCT | + |
Preference number: 2 (lower is better) Translates to: GGHICLIMITHALAFSKLRPSPC*DMGSSA Trigger: AGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCT...AAGTTTGCTGAAAGCTAGAGCATGAGTTATCATAATCAAGCAGATGTGACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR TCA 90 bp | ACTGAACACTACAGTTCTTCTCAAAAGGGCCCTTATCAAACTTCAGGCACTCGGAAACCCTGGCAGACTTaGTATAATGGCGGAAAGAAA | + |
Preference number: 2 (lower is better) Translates to: TEHYSSSQKGPYQTSGTRKPWQT*YNGGKK Trigger: TTTCTTTCCGCCATTATATCAAGTCTGCCAGGGTTT...CCGAGTGCCTGAAGTTTGATAAGGGCCCTTTTGAGAAGAACTGTAGTGTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR GCA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTGCTGTCTTCCTTTATaGAAGAAAATGTGGGTGGAA | + |
Preference number: 2 (lower is better) Translates to: LRLLSSFMQENVGGTSWDCCLPL*KKMWVE Trigger: TTCCACCCACATTTTCTTGCATAAAGGAAGACAGCA...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR CCA 90 bp | ACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGTTTATGCAAGAAAATGTaGGTGGAACCTCTTGGGACT | + |
Preference number: 2 (lower is better) Translates to: TVLHMDVVNVPSVLLLQSLCKKM*VEPLGT Trigger: AGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAA...ACTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR CCA 90 bp | CACAAAGCTTACCTTCCATGGACAGCATGGATGGAAGCTTTATTATTTTTCATAGCAAGAAAATGTGGGTaGAACCTCTTGGGACTCGGG | + |
Preference number: 2 (lower is better) Translates to: HKAYLPWTAWMEALLFFIARKCG*NLLGLG Trigger: CCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGC...TATGAAAAATAATAAAGCTTCCATCCATGCTGTCCATGGAAGGTAAGCTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
||
3UTR-3UTR CCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGACATGGACAGCATGGATaGAAGCTTTATTATTTTTCA | + |
Preference number: 2 (lower is better) Translates to: VGRQVPGNPGRLDIMAERHGQHG*KLYYFS Trigger: TGAAAAATAATAAAGCTTCCATCCATGCTGTCCATG...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
3UTR-3UTR CCA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGCATGGACAGCATGGATaGAAGCTTTATTATTTTTCA | + |
Preference number: 2 (lower is better) Translates to: VGATFTETAVFLYARKCGHGQHG*KLYYFS Trigger: TGAAAAATAATAAAGCTTCCATCCATGCTGTCCATG...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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3UTR-3UTR CAA 90 bp | GACTTTCAGGGTGTCCGGGAGGGTGCTGTGGTCCAGGAAGACTCTAGAGGAGAGTGGCAGCGGCCATCATaGGGGGTCAGGATGGCACCC | + |
Preference number: 3 (lower is better) Translates to: DFQGVREGAVVQEDSRGEWQRPS*GVRMAP Trigger: GGGTGCCATCCTGACCCCCAATGATGGCCGCTGCCA...CTCTCCTCTAGAGTCTTCCTGGACCACAGCACCCTCCCGGACACCCTGAAAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | CCGATGCGGCCAGACTCGGTGATCTCGTTGAGGGCCTaGAGCAAGTCCCCGCCCAGCTTCTTGACGTTGTTG | + |
Preference number: 3 (lower is better) Translates to: PMRPDSVISLRA*SKSPPSFLTLL Trigger: CAACAACGTCAAGAAGCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTCTGGCCGCATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | AGCCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGGCACAAGAGGTGTGGTaGTCCCTGCAGTGCGAGCCA | + |
Preference number: 3 (lower is better) Translates to: SHVVFAEGRRRGLRGSHLAQEVW*SLQCEP Trigger: TGGCTCGCACTGCAGGGACAACCACACCTCTTGTGC...CAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR GCA 72 bp | AGGCACTCGGCACAAGAGGTGTGGTTGTCCCTGCAGTaGGAGCCACAGCTGGGACAATCCTCACACATCGGT | + |
Preference number: 3 (lower is better) Translates to: RHSAQEVWLSLQ*EPQLGQSSHIG Trigger: ACCGATGTGTGAGGATTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR GCA 72 bp | TTGCGCCAGCCAATTTCCTCCGGACATGCAGCAACTTaGATTATGGCATCCAGCCCACCCTCAGGGGCGTCC | + |
Preference number: 3 (lower is better) Translates to: LRQPISSGHAAT*IMASSPPSGAS Trigger: GGACGCCCCTGAGGGTGGGCTGGATGCCATAATGCAAGTTGCTGCATGTCCGGAGGAAATTGGCTGGCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 72 bp | CACCTACCACGGTGCCCCCTACGATGGCAGCCACATTaGGGCCCTTCACACACTCTAGACTGTCCTCCACAT | + |
Preference number: 3 (lower is better) Translates to: HLPRCPLRWQPH*GPSHTLDCPPH Trigger: ATGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | GCCACAGTTGCAGGAACCCCGATCGGGTTGTTGATCTGTACGCCATCACAGTCCGCACAAGAGGTGTGGTaGTCCCTGCAGTGCGAGCCA | + |
Preference number: 3 (lower is better) Translates to: ATVAGTPIGLLICTPSQSAQEVW*SLQCEP Trigger: TGGCTCGCACTGCAGGGACAACCACACCTCTTGTGC...GGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | ATGACCAGGAGGAGGACACCAATCAGTACGACACCTACCACGGTGCCCCCTACGTGGCAGGCCTTCTCCTaGTTGGGACATGGGTTCCTC | + |
Preference number: 3 (lower is better) Translates to: MTRRRTPISTTPTTVPPTWQAFS*LGHGFL Trigger: GAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCA...CGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTGGTGTCCTCCTCCTGGTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR CAA 90 bp | GCCACAGTTGCAGGAACCCCGATCGGGTTGTTGATCTGTACGCCATCACAGTCCTCAATGGGGTATCCCTaGGCCCGCCGGAAAGTCACA | + |
Preference number: 3 (lower is better) Translates to: ATVAGTPIGLLICTPSQSSMGYP*ARRKVT Trigger: TGTGACTTTCCGGCGGGCCAAGGGATACCCCATTGA...GGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | TCGGTGGCTGGTAGCCTTCGTCACATATGCACCTGTTaGATTGGCAGTGGCCACGGCCACTGCACTCTACCA | + |
Preference number: 3 (lower is better) Translates to: SVAGSLRHICTC*IGSGHGHCTLP Trigger: TGGTAGAGTGCAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCATATGTGACGAAGGCTACCAGCCACCGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR GCA 72 bp | GATATCATCGGCTGGACAACCCTTCAGCAGCAGCTGTaGCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCC | + |
Preference number: 3 (lower is better) Translates to: DIIGWTTLQQQL*PCVTAQGVRFS Trigger: GGAGAACCTGACTCCTTGCGCTGTGACACACGGGCACAGCTGCTGCTGAAGGGTTGTCCAGCCGATGATATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | GGGGTATCCCTTGGCCCGCCGGAAAGTCACATTGAATaGGGCAGCCTGTCCTGGTCGCAAGTAAAGTGTCAC | + |
Preference number: 3 (lower is better) Translates to: GVSLGPPESHIE*GSLSWSQVKCH Trigger: GTGACACTTTACTTGCGACCAGGACAGGCTGCCGCATTCAATGTGACTTTCCGGCGGGCCAAGGGATACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 72 bp | AAGAGGTGTGGTTGTCCCTGCAGTGCGAGCCACAGCTaGGACAATCCTCACACATCGGTGGCTGGTAGCCTT | + |
Preference number: 3 (lower is better) Translates to: KRCGCPCSASHS*DNPHTSVAGSL Trigger: AAGGCTACCAGCCACCGATGTGTGAGGATTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCACACCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 72 bp | CAATCAGTACGACACCTACCACGGTGCCCCCTACGATaGCAGCCACATTGGGGCCCTTCACACACTCTAGAC | + |
Preference number: 3 (lower is better) Translates to: QSVRHLPRCPLR*QPHWGPSHTLD Trigger: GTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 72 bp | TGCCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCTAGGCCAGTGGGAAGGAAGG | + |
Preference number: 3 (lower is better) Translates to: CPCVTAQGVRFS*SSEVLGQWEGR Trigger: CCTTCCTTCCCACTGGCCTAGAACTTCACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACACACGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR TCA 72 bp | CAATGGGGTATCCCTTGGCCCGCCGGAAAGTCACATTaGATGCGGCAGCCTGTCCTGGTCGCAAGTAAAGTG | + |
Preference number: 3 (lower is better) Translates to: QWGIPWPAGKSH*MRQPVLVASKV Trigger: CACTTTACTTGCGACCAGGACAGGCTGCCGCATTCAATGTGACTTTCCGGCGGGCCAAGGGATACCCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | CCTCAGGGGCGTCCAGGTTTCCGGAAATCAGTTGCTTaGCGACCTCTGTCTGAAACTGGTTGGAGTTGTCGG | + |
Preference number: 3 (lower is better) Translates to: PQGRPGFRKSVA*RPLSETGWSCR Trigger: CCGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAACCTGGACGCCCCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 72 bp | ATTAGCGATGCTCCTGGGGTCCATGATATCATCGGCTaGACAACCCTTCAGCAGCAGCTGTGCCCGTGTGTC | + |
Preference number: 3 (lower is better) Translates to: ISDAPGVHDIIG*TTLQQQLCPCV Trigger: GACACACGGGCACAGCTGCTGCTGAAGGGTTGTCCAGCCGATGATATCATGGACCCCAGGAGCATCGCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 72 bp | GAAAGGCAAATGGGGGCTGGCAGGCCTTCTCCTTGTTaGGACATGGGTTCCTCAGCTTCTCAGGATGGGTGT | + |
Preference number: 3 (lower is better) Translates to: ERQMGAGRPSPC*DMGSSASQDGC Trigger: ACACCCATCCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CCA 72 bp | GTTAACTTGAGCACGTGCCGAAAGGCAAATGGGGGCTaGCAGGCCTTCTCCTTGTTGGGACATGGGTTCCTC | + |
Preference number: 3 (lower is better) Translates to: VNLSTCRKANGG*QAFSLLGHGFL Trigger: GAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCACGTGCTCAAGTTAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR TCA 72 bp | CCTCTGTCTGAAACTGGTTGGAGTTGTCGGTTAACTTaGGCACGTGCCGAAAGGCAAATGGGGGCTGGCAGG | + |
Preference number: 3 (lower is better) Translates to: PLSETGWSCRLT*ARAERQMGAGR Trigger: CCTGCCAGCCCCCATTTGCCTTTCGGCACGTGCTCAAGTTAACCGACAACTCCAACCAGTTTCAGACAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR TCA 72 bp | CATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTTaGTCTGTACGCCATCACAGTCCCCACGGGATTTGC | + |
Preference number: 3 (lower is better) Translates to: HLPQLQEPRSGC*SVRHHSPHGIC Trigger: GCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR GCA 72 bp | GTGCCAGCTGACCCACGGATGGGTAGTCGAACTCATTaGTCCTCTTGTACATGTTATCCTCCAGGTGGCAGC | + |
Preference number: 3 (lower is better) Translates to: VPADPRMGSRTH*SSCTCYPPGGS Trigger: GCTGCCACCTGGAGGATAACATGTACAAGAGGAGCAATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | TCGTCAGACAGTTCCCCCACTGCTGACTTGGGGATGATCTCCGTGAGTTTCTCATCCCCGCCCAGCTTCTaGACGTTGTTGAGGTCATCA | + |
Preference number: 3 (lower is better) Translates to: SSDSSPTADLGMISVSFSSPPSF*TLLRSS Trigger: TGATGACCTCAACAACGTCAAGAAGCTGGGCGGGGA...TGAGAAACTCACGGAGATCATCCCCAAGTCAGCAGTGGGGGAACTGTCTGACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTGACTCGGTGATCTCGTaGAGGGCCTGCAGCAAGTCC | + |
Preference number: 3 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVDSVIS*RACSKS Trigger: GGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTC...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR-3UTR CAA 90 bp | AGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTGTCCAGGCCTTCTCCTTGTaGGGACATGGGTTCCTCAGC | + |
Preference number: 3 (lower is better) Translates to: SKLGVHDRCRSTLEEGVVQAFSL*GHGFLS Trigger: GCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTG...GACAACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | CCATCTTCTTTGTCACCGCAAAGATGGGCTGGATGTTaGTCTCGGAAAGTTTGTGTGCCAGCTGACCCACGG | + |
Preference number: 3 (lower is better) Translates to: PSSLSPQRWAGC*SRKVCVPADPR Trigger: CCGTGGGTCAGCTGGCACACAAACTTTCCGAGAGCAACATCCAGCCCATCTTTGCGGTGACAAAGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR-3UTR CAA 90 bp | TGTCACCGCAAAGATGGGCTGGATGTTGCTCTCGGAAAGTTTGTGTGCCAGCTGAGCTTCTTGACGTTGTaGAGGTCATCAAGCATGGAG | + |
Preference number: 3 (lower is better) Translates to: CHRKDGLDVALGKFVCQLSFLTL*RSSSME Trigger: CTCCATGCTTGATGACCTCAACAACGTCAAGAAGCT...CAGCTGGCACACAAACTTTCCGAGAGCAACATCCAGCCCATCTTTGCGGTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR GCA 72 bp | AAAGATGGGCTGGATGTTGCTCTCGGAAAGTTTGTGTaGCAGCTGACCCACGGATGGGTAGTCGAACTCATT | + |
Preference number: 3 (lower is better) Translates to: KDGLDVALGKFV*QLTHGWVVELI Trigger: AATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCACACAAACTTTCCGAGAGCAACATCCAGCCCATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR CCA 72 bp | CTTGATATAATGGCGGAAAGAAACCGAGCAGGCTTTTaGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCA | + |
Preference number: 3 (lower is better) Translates to: LDIMAERNRAGF*ILGSTGVSCKP Trigger: TGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCATTATATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CCA 72 bp | GCTCTCGGAAAGTTTGTGTGCCAGCTGACCCACGGATaGGTAGTCGAACTCATTGCTCCTCTTGTACATGTT | + |
Preference number: 3 (lower is better) Translates to: ALGKFVCQLTHG*VVELIAPLVHV Trigger: AACATGTACAAGAGGAGCAATGAGTTCGACTACCCATCCGTGGGTCAGCTGGCACACAAACTTTCCGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR TCA 72 bp | AGGTTTCCGGAAATCAGTTGCTTGCCGACCTCTGTCTaGAACTGGTTGGAGTTGTCGGTTAACTTGAGCACG | + |
Preference number: 3 (lower is better) Translates to: RFPEISCLPTSV*NWLELSVNLST Trigger: CGTGCTCAAGTTAACCGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR GCA 72 bp | GCCATCACAGTCCCCACGGGATTTGCCTATACTCGATaGTCCATTACTGCAGAAGGAGTCATAGGTGACTTT | + |
Preference number: 3 (lower is better) Translates to: AITVPTGFAYTR*SITAEGVIGDF Trigger: AAAGTCACCTATGACTCCTTCTGCAGTAATGGAGCATCGAGTATAGGCAAATCCCGTGGGGACTGTGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR CCA 72 bp | TCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTaGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAG | + |
Preference number: 3 (lower is better) Translates to: SSFMQENVGGTS*DSGQFLGLCGK Trigger: CTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR-3UTR CAA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACCCCAGCTTCTTGACGTaGTTGAGGTCATCAAGCATG | + |
Preference number: 3 (lower is better) Translates to: LRLLSSFMQENVGGTSWDPSFLT*LRSSSM Trigger: CATGCTTGATGACCTCAACAACGTCAAGAAGCTGGG...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR CCA 72 bp | GAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTaGAACCTCTTGGGACTCGGGACAATTCTTAGGGCT | + |
Preference number: 3 (lower is better) Translates to: ETAVFLYARKCG*NLLGLGTILRA Trigger: AGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
3UTR CCA 72 bp | CATACGTTTTCACCATCTTCTTTGTCACCGCAAAGATaGGCTGGATGTTGCTCTCGGAAAGTTTGTGTGCCA | + |
Preference number: 3 (lower is better) Translates to: HTFSPSSLSPQR*AGCCSRKVCVP Trigger: TGGCACACAAACTTTCCGAGAGCAACATCCAGCCCATCTTTGCGGTGACAAAGAAGATGGTGAAAACGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
3UTR CAA 72 bp | GACCCAAAGCCGATGCGGCCAGACTCGGTGATCTCGTaGAGGGCCTGCAGCAAGTCCCCGCCCAGCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: DPKPMRPDSVIS*RACSKSPPSFL Trigger: CAAGAAGCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTCTGGCCGCATCGGCTTTGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
||
CDS-3UTR GCA 90 bp | AGCCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGGGGTGTCCGGGAGGGTaGTGTGGTCCAGGAAGACTC | + |
Preference number: 4 (lower is better) Translates to: SHVVFAEGRRRGLRGSHLGCPGG*CGPGRL Trigger: GAGTCTTCCTGGACCACAGCACCCTCCCGGACACCC...CAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR GCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGATCTCGTTGAGGGCCTaGAGCAAGTCCCCGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGISLRA*SKSPPS Trigger: GCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGAT...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR GCA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCATCTCGTTGAGGGCCTaGAGCAAGTCCCCGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: MAERNRAGFWILGSTGVSISLRA*SKSPPS Trigger: GCTGGGCGGGGACTTGCTGCAGGCCCTCAACGAGAT...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR GCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGGGGTGTCCGGGAGGGTaGTGTGGTCCAGGAAGACTC | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGGCPGG*CGPGRL Trigger: GAGTCTTCCTGGACCACAGCACCCTCCCGGACACCC...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR GCA 90 bp | CCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTTGGTTGTCCCTGCAGTaGGAGCCACAGCTGGGACAA | + |
Preference number: 4 (lower is better) Translates to: PRCVCRGEEAWSEGVTSAWLSLQ*EPQLGQ Trigger: TTGTCCCAGCTGTGGCTCGCACTGCAGGGACAACCA...AGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
||
3UTR CAA 72 bp | ACACCTACCACGGTGCCCCCTACGATGGCAGCCACATaGGGGCCCTTCACACACTCTAGACTGTCCTCCACA | + |
Preference number: 4 (lower is better) Translates to: TPTTVPPTMAAT*GPFTHSRLSST Trigger: TGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
||
CDS-3UTR TCA 90 bp | AAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAACTCTGGTCCCGGCACTaGCACTCACACTGGGGACGG | + |
Preference number: 4 (lower is better) Translates to: KCGWNLLGLGTILRALRQLWSRH*HSHWGR Trigger: CCGTCCCCAGTGTGAGTGTCAGTGCCGGGACCAGAG...TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR CCA 90 bp | AGCCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGAAGGCAAATGGGGGCTaGCAGGCCTTCTCCTTGTTG | + |
Preference number: 4 (lower is better) Translates to: SHVVFAEGRRRGLRGSHLKANGG*QAFSLL Trigger: CAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTT...CAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR CCA 90 bp | AATCAGTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCACATTGGGGCCCATTGGGGGTCAGGATaGCACCCAGTTTGCCATCAC | + |
Preference number: 4 (lower is better) Translates to: NQYDTYHGAPYDGSHIGAHWGSG*HPVCHH Trigger: GTGATGGCAAACTGGGTGCCATCCTGACCCCCAATG...GGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCGGCAGCGGCCATCATTaGGGGTCAGGATGGCACCCA | + |
Preference number: 4 (lower is better) Translates to: ENVGGTSWDSGQFLGLCGGSGHH*GSGWHP Trigger: TGGGTGCCATCCTGACCCCCAATGATGGCCGCTGCC...GCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR CCA 90 bp | CCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTATGTTATCCTCCAGGTaGCAGCGGCCATCATTGGGG | + |
Preference number: 4 (lower is better) Translates to: PRCVCRGEEAWSEGVTSAMLSSR*QRPSLG Trigger: CCCCAATGATGGCCGCTGCCACCTGGAGGATAACAT...AGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGAACCCAGTGCCCGGATaGCAAAGGACTGCTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGNPVPG*QRTAPG Trigger: TCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTT...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGTCTCCAGCTCCTGGCTaGTCCGACCCTGAGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: ERNRAGFWILGSTGVSCKSPAPG*SDPESG Trigger: GCCAGACTCAGGGTCGGAGCAGCCAGGAGCTGGAGA...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTGGAAGCCATCGTCTGTaGCAAACACCAGCAGCCTCG | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCGSHRL*QTPAAS Trigger: CGAGGCTGCTGGTGTTTGCCACAGACGATGGCTTCC...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR CCA 90 bp | ATCAAACTTCAGGCACTCGGCACAAGAGGTGTGGTTGTCCCTGCAGTGCGAGCCGGAAGCCATCGTCTGTaGCAAACACCAGCAGCCTCG | + |
Preference number: 4 (lower is better) Translates to: IKLQALGTRGVVVPAVRAGSHRL*QTPAAS Trigger: CGAGGCTGCTGGTGTTTGCCACAGACGATGGCTTCC...GGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGTGCCTGAAGTTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTCCATCACCAGCAAAGTaGAAGCCATCGTCTGTGGCA | + |
Preference number: 4 (lower is better) Translates to: PRCVCRGEEAWSEGVTSAPSPAK*KPSSVA Trigger: TGCCACAGACGATGGCTTCCACTTTGCTGGTGATGG...AGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTTCCGGGAGGGTGCTGTaGTCCAGGAAGACTCTAGAG | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCSGRVL*SRKTLE Trigger: CTCTAGAGTCTTCCTGGACCACAGCACCCTCCCGGA...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTATGCACCTGTTGCATTaGCAGTGGCCACGGCCACTG | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCMHLLH*QWPRPL Trigger: CAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCAT...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | ATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGGAGCTGAGGTCAGTCAGGTaGGTCAGGGCCTTCCAGATG | + |
Preference number: 4 (lower is better) Translates to: ILGSTGVSCKPRCVCRGELRSVR*VRAFQM Trigger: CATCTGGAAGGCCCTGACCCACCTGACTGACCTCAG...CTCCCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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3UTR CAA 72 bp | TGCCGAAAGGCAAATGGGGGCTGGCAGGCCTTCTCCTaGTTGGGACATGGGTTCCTCAGCTTCTCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: CRKANGGWQAFS*LGHGFLSFSGW Trigger: CCATCCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS-3UTR TCA 90 bp | AGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCATGGCTGCTCCGACCCTaGGTCTGGCACTCACAGTTT | + |
Preference number: 4 (lower is better) Translates to: RNRAGFWILGSTGVSCKPWLLRP*VWHSQF Trigger: AAACTGTGAGTGCCAGACTCAGGGTCGGAGCAGCCA...TGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR GCA 90 bp | ATGACCAGGAGGAGGACACCAATCAGTACGACACCTACCACGGTGCCCCCTACGGAAAGTCACATTGAATaGGGCAGCCTGTCCTGGTCG | + |
Preference number: 4 (lower is better) Translates to: MTRRRTPISTTPTTVPPTESHIE*GSLSWS Trigger: CGACCAGGACAGGCTGCCGCATTCAATGTGACTTTC...CGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTGGTGTCCTCCTCCTGGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | CCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTCGGATGACAAAGGACTaGTCCTGGATACACTCGGAA | + |
Preference number: 4 (lower is better) Translates to: PRCVCRGEEAWSEGVTSARMTKD*SWIHSE Trigger: TTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCG...AGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGGTGAAGTTCAGCTTCTaGCACCAGGAACAGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGVKFSF*HQEQPG Trigger: GCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCAC...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | TATGCACCTGTTGCATTGGCAGTGGCCACGGCCACTGCACTCTACCAGCCGTGCGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCAGCTT | + |
Preference number: 4 (lower is better) Translates to: YAPVALAVATATALYQPCGVRFS*SSEVQL Trigger: AAGCTGAACTTCACTGGACCAGGAGAACCTGACTCC...GCACGGCTGGTAGAGTGCAGTGGCCGTGGCCACTGCCAATGCAACAGGTGCATA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTTGCGGCAGCCTGTCCTaGTCGCAAGTAAAGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCCGSLS*SQVKCH Trigger: GTGACACTTTACTTGCGACCAGGACAGGCTGCCGCA...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGCAATGGGGTATCCCTTaGCCCGCCGGAAAGTCACAT | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGQWGIP*PAGKSH Trigger: ATGTGACTTTCCGGCGGGCCAAGGGATACCCCATTG...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCGGTAGTACAGATCAATaGGGTATCCCTTGGCCCGCC | + |
Preference number: 4 (lower is better) Translates to: MAERNRAGFWILGSTGVSGSTDQ*GIPWPA Trigger: GGCGGGCCAAGGGATACCCCATTGATCTGTACTACC...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTCATTGGGGGTCAGGATaGCACCCAGTTTGCCATCAC | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCHWGSG*HPVCHH Trigger: GTGATGGCAAACTGGGTGCCATCCTGACCCCCAATG...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTGCTGCACCACGTTGCTaGAGTCGTCAGACAGTTCCC | + |
Preference number: 4 (lower is better) Translates to: GWNLLGLGTILRALRQDCAAPRC*SRQTVP Trigger: GGGAACTGTCTGACGACTCCAGCAACGTGGTGCAGC...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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3UTR CAA 72 bp | CCCACCCTCAGGGGCGTCCAGGTTTCCGGAAATCAGTaGCTTGCCGACCTCTGTCTGAAACTGGTTGGAGTT | + |
Preference number: 4 (lower is better) Translates to: PTLRGVQVSGNQ*LADLCLKLVGV Trigger: AACTCCAACCAGTTTCAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAACCTGGACGCCCCTGAGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS-3UTR TCA 90 bp | AGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGGCCGGAAAGTCACATTaGATGCGGCAGCCTGTCCTG | + |
Preference number: 4 (lower is better) Translates to: RKCGWNLLGLGTILRALRAGKSH*MRQPVL Trigger: CAGGACAGGCTGCCGCATTCAATGTGACTTTCCGGC...CCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | AGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGAACCCAGTGCCCGGATaGCAAAGGACTGCTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: RKCGWNLLGLGTILRALRNPVPG*QRTAPG Trigger: TCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTT...CCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACCTCTGGTCCCGGCACTaGCACTCACACTGGGGACGG | + |
Preference number: 4 (lower is better) Translates to: LRLLSSFMQENVGGTSWDLWSRH*HSHWGR Trigger: CCGTCCCCAGTGTGAGTGTCAGTGCCGGGACCAGAG...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | CAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCAGCGCCTGTACTCCCTaGGGTCAGTCAGGTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: QENVGGTSWDSGQFLGLCSACTP*GQSGGS Trigger: TGACCCACCTGACTGACCTCAGGGAGTACAGGCGCT...GCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | GAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCGGTAGTACAGATCAATaGGGTATCCCTTGGCCCGCC | + |
Preference number: 4 (lower is better) Translates to: ENVGGTSWDSGQFLGLCGGSTDQ*GIPWPA Trigger: GGCGGGCCAAGGGATACCCCATTGATCTGTACTACC...GCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAATCCGGGAGGGTGCTGTaGTCCAGGAAGACTCTAGAG | + |
Preference number: 4 (lower is better) Translates to: KCGWNLLGLGTILRALRQSGRVL*SRKTLE Trigger: CTCTAGAGTCTTCCTGGACCACAGCACCCTCCCGGA...TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CCTACGATGGCAGCCACATTGGGGCCCTTCACACACTCTAGACTGTCCTCCACAGCCATGACCTTTACCTaGAAGGTGACCGGGTTGTTG | + |
Preference number: 4 (lower is better) Translates to: PTMAATLGPFTHSRLSSTAMTFT*KVTGLL Trigger: CAACAACCCGGTCACCTTCCAGGTAAAGGTCATGGC...TGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTTGGGGACGTCACTaGTATGGCATACACACTGCC | + |
Preference number: 4 (lower is better) Translates to: MAERNRAGFWILGSTGVSCWGRH*YGIHTA Trigger: GGCAGTGTGTATGCCATACCAGTGACGTCCCCAACA...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR TCA 90 bp | AGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCAAGAAGGAGTCATAGGTaGCTTTCAGGGTGTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: RNRAGFWILGSTGVSCKPRRSHR*LSGCPG Trigger: TCCCGGACACCCTGAAAGTCACCTATGACTCCTTCT...TGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | GTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTTGATTATAGATACCACACTCCATaGCTCCCTTGCCTCCACAGA | + |
Preference number: 4 (lower is better) Translates to: VFAEGRRRGLRGSHLLDYRYHTP*LPCLHR Trigger: TCTGTGGAGGCAAGGGAGTCATGGAGTGTGGTATCT...ATAATCAAGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
||
CDS-3UTR GCA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTATCCGTGAAACCCAGTaGCCGGATGACAAAGGACTG | + |
Preference number: 4 (lower is better) Translates to: GWNLLGLGTILRALRQDCIRETQ*PDDKGL Trigger: CAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGAT...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | ATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGGAGGCTTGCAACTACATTTaGCACAGTTGCAGGAACCCC | + |
Preference number: 4 (lower is better) Translates to: ILGSTGVSCKPRCVCRGEACNYI*HSCRNP Trigger: GGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGC...CTCCCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
||
CDS-3UTR GCA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTCCGAGTCCCTCTCCTTaGAGGGCTTTTTCTTCAAAG | + |
Preference number: 4 (lower is better) Translates to: AERNRAGFWILGSTGVSCPSPSP*RAFSSK Trigger: CTTTGAAGAAAAAGCCCTGCAAGGAGAGGGACTCGG...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
||
CDS-3UTR CCA 90 bp | AAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGTGAAGTTCAGCTTCTaGCACCAGGAACAGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: KCGWNLLGLGTILRALRQVKFSF*HQEQPG Trigger: GCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCAC...TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTTGATTATAGGCCTTCTCCTTGTTaGGACATGGGTTCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VFAEGRRRGLRGSHLLDYRPSPC*DMGSSA Trigger: AGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCT...ATAATCAAGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACGGCAGCGGCCATCATTaGGGGTCAGGATGGCACCCA | + |
Preference number: 4 (lower is better) Translates to: LRLLSSFMQENVGGTSWDGSGHH*GSGWHP Trigger: TGGGTGCCATCCTGACCCCCAATGATGGCCGCTGCC...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | TCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTGGCTGCACCACGTTGCTaGAGTCGTCAGACAGTTCCC | + |
Preference number: 4 (lower is better) Translates to: SANLGFMTVVVALLKRGLAAPRC*SRQTVP Trigger: GGGAACTGTCTGACGACTCCAGCAACGTGGTGCAGC...CAACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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3UTR CAA 72 bp | TTCTCAGGATGGGTGTTAACAAAAGGCAGCACCGTCTaGTCCACAAACGACCCAAAGCCGATGCGGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: FSGWVLTKGSTV*STNDPKPMRPD Trigger: GTCTGGCCGCATCGGCTTTGGGTCGTTTGTGGACAAGACGGTGCTGCCTTTTGTTAACACCCATCCTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 72 bp | ACATTTGCCACAGTTGCAGGAACCCCGATCGGGTTGTaGATCTGTACGCCATCACAGTCCCCACGGGATTTG | + |
Preference number: 4 (lower is better) Translates to: TFATVAGTPIGL*ICTPSQSPRDL Trigger: CAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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3UTR CAA 72 bp | ACTACATTTGCCACAGTTGCAGGAACCCCGATCGGGTaGTTGATCTGTACGCCATCACAGTCCCCACGGGAT | + |
Preference number: 4 (lower is better) Translates to: TTFATVAGTPIG*LICTPSQSPRD Trigger: ATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGATCGGGGTTCCTGCAACTGTGGCAAATGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS-3UTR TCA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGTTGCCGACCTCTGTCTaGAACTGGTTGGAGTTGTCG | + |
Preference number: 4 (lower is better) Translates to: ERNRAGFWILGSTGVSCKLPTSV*NWLELS Trigger: CGACAACTCCAACCAGTTTCAGACAGAGGTCGGCAA...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTCAGTTCCCCCACTGCTaGCTTGGGGATGATCTCCGT | + |
Preference number: 4 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVQFPHC*LGDDLR Trigger: ACGGAGATCATCCCCAAGTCAGCAGTGGGGGAACTG...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGGGATGGCACCCAGTTTaGCATCACCAGCAAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: ERNRAGFWILGSTGVSCKGWHPV*HHQQSG Trigger: TCCACTTTGCTGGTGATGGCAAACTGGGTGCCATCC...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAACACACTGCCCACAGATaGAGTCCCCAAGCCCTGAGC | + |
Preference number: 4 (lower is better) Translates to: LSSFMQENVGGTSWDSGQHTAHR*SPQALS Trigger: GCTCAGGGCTTGGGGACTGCATCTGTGGGCAGTGTG...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR GCA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGAGGTGTGGTTGTCCCTaGAGTGCGAGCCACAGCTGG | + |
Preference number: 4 (lower is better) Translates to: VGATFTETAVFLYARKCGRCGCP*SASHSW Trigger: CCAGCTGTGGCTCGCACTGCAGGGACAACCACACCT...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR GCA 90 bp | TGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGCCACGTTGTGTTTGCAGAGGGTTCAAAGGGATAGTCTaGAGCGTCATACCAGCACAC | + |
Preference number: 4 (lower is better) Translates to: WILGSTGVSCKPRCVCRGFKGIV*SVIPAH Trigger: GTGTGCTGGTATGACGCTGCAGACTATCCCTTTGAA...CCCTCTGCAAACACAACGTGGCTTACAGCTCACCCCAGTGCTGCCAAGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | GAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCAGCTT | + |
Preference number: 4 (lower is better) Translates to: ENVGGTSWDSGQFLGLCGGVRFS*SSEVQL Trigger: AAGCTGAACTTCACTGGACCAGGAGAACCTGACTCC...GCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAAGTGCCGAAAGGCAAATaGGGGCTGGCAGGCCTTCTC | + |
Preference number: 4 (lower is better) Translates to: LSSFMQENVGGTSWDSGQVPKGK*GLAGLL Trigger: GAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCAC...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAACAGCAACTTGCATTATaGCATCCAGCCCACCCTCAG | + |
Preference number: 4 (lower is better) Translates to: KCGWNLLGLGTILRALRQQQLAL*HPAHPQ Trigger: CTGAGGGTGGGCTGGATGCCATAATGCAAGTTGCTG...TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGGCCCTGAGCACACGATaGAACTATTGTCCTTCCGAC | + |
Preference number: 4 (lower is better) Translates to: ERNRAGFWILGSTGVSCKALSTR*NYCPSD Trigger: GTCGGAAGGACAATAGTTCCATCGTGTGCTCAGGGC...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR TCA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGGCCGGAAAGTCACATTaGATGCGGCAGCCTGTCCTG | + |
Preference number: 4 (lower is better) Translates to: VGATFTETAVFLYARKCGAGKSH*MRQPVL Trigger: CAGGACAGGCTGCCGCATTCAATGTGACTTTCCGGC...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGAATGTTATCCTCCAGGTaGCAGCGGCCATCATTGGGG | + |
Preference number: 4 (lower is better) Translates to: VGRQVPGNPGRLDIMAERMLSSR*QRPSLG Trigger: CCCCAATGATGGCCGCTGCCACCTGGAGGATAACAT...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | AAGATTGTGCAGGTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATATGCTCCTGGGGTCCATaGTATCATCGGCTGGACAAC | + |
Preference number: 4 (lower is better) Translates to: KIVQVGRQVPGNPGRLDICSWGP*YHRLDN Trigger: GTTGTCCAGCCGATGATATCATGGACCCCAGGAGCA...TATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGACCTGCACAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | GACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGTGCTCCTGGGGTCCATaGTATCATCGGCTGGACAAC | + |
Preference number: 4 (lower is better) Translates to: DCPPHGCCKCSFRPSAAKCSWGP*YHRLDN Trigger: GTTGTCCAGCCGATGATATCATGGACCCCAGGAGCA...CTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | TGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATCAGTTCCCCCACTGCTaGCTTGGGGATGATCTCCGT | + |
Preference number: 4 (lower is better) Translates to: CLPLCKKMWVEPLGTRDNQFPHC*LGDDLR Trigger: ACGGAGATCATCCCCAAGTCAGCAGTGGGGGAACTG...ATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTAGAAGGAGTCATAGGTaGCTTTCAGGGTGTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVRRSHR*LSGCPG Trigger: TCCCGGACACCCTGAAAGTCACCTATGACTCCTTCT...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGGCAGTCCCCAAGCCCTaGGCACACGATGGAACTATT | + |
Preference number: 4 (lower is better) Translates to: VGATFTETAVFLYARKCGAVPKP*AHDGTI Trigger: AATAGTTCCATCGTGTGCTCAGGGCTTGGGGACTGC...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR GCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGAGTATGGCATACACACTaGCCACAGATGCAGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: VGRQVPGNPGRLDIMAERVWHTH*PQMQSP Trigger: TGGGGACTGCATCTGTGGGCAGTGTGTATGCCATAC...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | AAGATTGTGCAGGTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATACAATGGGGTATCCCTTaGCCCGCCGGAAAGTCACAT | + |
Preference number: 4 (lower is better) Translates to: KIVQVGRQVPGNPGRLDIQWGIP*PAGKSH Trigger: ATGTGACTTTCCGGCGGGCCAAGGGATACCCCATTG...TATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGACCTGCACAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGAAGGCCTTCTCCTTGTTaGGACATGGGTTCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VGRQVPGNPGRLDIMAERRPSPC*DMGSSA Trigger: AGCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCT...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CTTTTTCTTCAAAGGGATAGTCTGCAGCGTCATACCAGCACACTGAACACTACAGTGCCGAAAGGCAAATaGGGGCTGGCAGGCCTTCTC | + |
Preference number: 4 (lower is better) Translates to: LFLQRDSLQRHTSTLNTTVPKGK*GLAGLL Trigger: GAGAAGGCCTGCCAGCCCCCATTTGCCTTTCGGCAC...TGTAGTGTTCAGTGTGCTGGTATGACGCTGCAGACTATCCCTTTGAAGAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTTTGTCACCGCAAAGATaGGCTGGATGTTGCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVLSPQR*AGCCSR Trigger: CCGAGAGCAACATCCAGCCCATCTTTGCGGTGACAA...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | GACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGAGATACCACACTCCATaGCTCCCTTGCCTCCACAGA | + |
Preference number: 4 (lower is better) Translates to: DCPPHGCCKCSFRPSAAKRYHTP*LPCLHR Trigger: TCTGTGGAGGCAAGGGAGTCATGGAGTGTGGTATCT...CTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR TCA 90 bp | TTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTTCAGGGCCTTCCAGATaGCCAGGAGGAGGACACCAA | + |
Preference number: 4 (lower is better) Translates to: FLYARKCGWNLLGLGTILSGPSR*PGGGHQ Trigger: TTGGTGTCCTCCTCCTGGTCATCTGGAAGGCCCTGA...AAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR GCA 90 bp | AGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGAAAGTCACATTGAATaGGGCAGCCTGTCCTGGTCG | + |
Preference number: 4 (lower is better) Translates to: RLLSSFMQENVGGTSWDSESHIE*GSLSWS Trigger: CGACCAGGACAGGCTGCCGCATTCAATGTGACTTTC...CGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | CAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCCTCAGCTTCTCAGGATaGGTGTTAACAAAAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: QENVGGTSWDSGQFLGLCLSFSG*VLTKGS Trigger: GCTGCCTTTTGTTAACACCCATCCTGAGAAGCTGAG...GCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AAGATTGTGCAGGTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATACTCCTTGTTGGGACATaGGTTCCTCAGCTTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: KIVQVGRQVPGNPGRLDILLVGT*VPQLLR Trigger: CCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAG...TATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGACCTGCACAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | ACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGTAAGGCAAATGGGGGCTaGCAGGCCTTCTCCTTGTTG | + |
Preference number: 4 (lower is better) Translates to: TVLHMDVVNVPSVLLLQSKANGG*QAFSLL Trigger: CAACAAGGAGAAGGCCTGCCAGCCCCCATTTGCCTT...ACTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGCCATCACCAGCAAAGTaGAAGCCATCGTCTGTGGCA | + |
Preference number: 4 (lower is better) Translates to: RLLSSFMQENVGGTSWDSPSPAK*KPSSVA Trigger: TGCCACAGACGATGGCTTCCACTTTGCTGGTGATGG...CGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGTTGTCACCGCAAAGATaGGCTGGATGTTGCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: RLLSSFMQENVGGTSWDSLSPQR*AGCCSR Trigger: CCGAGAGCAACATCCAGCCCATCTTTGCGGTGACAA...CGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGGCCATGACCTTTACCTaGAAGGTGACCGGGTTGTTG | + |
Preference number: 4 (lower is better) Translates to: VGATFTETAVFLYARKCGAMTFT*KVTGLL Trigger: CAACAACCCGGTCACCTTCCAGGTAAAGGTCATGGC...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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3UTR CAA 72 bp | GTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTaGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAA | + |
Preference number: 4 (lower is better) Translates to: VFLYARKCGWNL*GLGTILRALRQ Trigger: TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 72 bp | GCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTaGAAGAGGGGGTTGTCATTGTTCCATTGGGACTTG | + |
Preference number: 4 (lower is better) Translates to: ANLGFMTVVVAL*KRGLSLFHWDL Trigger: CAAGTCCCAATGGAACAATGACAACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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3UTR CAA 72 bp | TTGTTGATCTGTACGCCATCACAGTCCCCACGGGATTaGCCTATACTCGATGCTCCATTACTGCAGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: LLICTPSQSPRD*PILDAPLLQKE Trigger: CTCCTTCTGCAGTAATGGAGCATCGAGTATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS-3UTR GCA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAACGGATGACAAAGGACTaGTCCTGGATACACTCGGAA | + |
Preference number: 4 (lower is better) Translates to: LSSFMQENVGGTSWDSGQRMTKD*SWIHSE Trigger: TTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCG...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | CAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCTCACACTCGCAGTATTaGCCAAAGATCTCTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: QENVGGTSWDSGQFLGLCSHSQY*PKISLL Trigger: CAACAAAGAGATCTTTGGGCAATACTGCGAGTGTGA...GCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | TTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTCAGCAACTTGCATTATaGCATCCAGCCCACCCTCAG | + |
Preference number: 4 (lower is better) Translates to: FLYARKCGWNLLGLGTILQQLAL*HPAHPQ Trigger: CTGAGGGTGGGCTGGATGCCATAATGCAAGTTGCTG...AAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAATTGTCATTGTTCCATTaGGACTTGAGTTTCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: KCGWNLLGLGTILRALRQLSLFH*DLSFSF Trigger: GAAGGAGAAACTCAAGTCCCAATGGAACAATGACAA...TTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CCA 90 bp | GGGGGTCACATCTGCTTGATTATGATAACTCATGCTCTAGCTTTCAGCAAACTTCTCCTTGTTGGGACATaGGTTCCTCAGCTTCTCAGG | + |
Preference number: 4 (lower is better) Translates to: GGHICLIMITHALAFSKLLLVGT*VPQLLR Trigger: CCTGAGAAGCTGAGGAACCCATGTCCCAACAAGGAG...AAGTTTGCTGAAAGCTAGAGCATGAGTTATCATAATCAAGCAGATGTGACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR GCA 90 bp | AAGCTTACCTTCCATGGACAGCATGGATGGAAGCTTTATTATTTTTCATACATGATCCGTGAAACCCAGTaGCCGGATGACAAAGGACTG | + |
Preference number: 4 (lower is better) Translates to: KLTFHGQHGWKLYYFSYMIRETQ*PDDKGL Trigger: CAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGAT...CATGTATGAAAAATAATAAAGCTTCCATCCATGCTGTCCATGGAAGGTAAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CCA 90 bp | AAGCTTACCTTCCATGGACAGCATGGATGGAAGCTTTATTATTTTTCATACATGCTCAGCTTCTCAGGATaGGTGTTAACAAAAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: KLTFHGQHGWKLYYFSYMLSFSG*VLTKGS Trigger: GCTGCCTTTTGTTAACACCCATCCTGAGAAGCTGAG...CATGTATGAAAAATAATAAAGCTTCCATCCATGCTGTCCATGGAAGGTAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS TCA 90 bp | CCCTTGCCTCCACAGAGACTCTGCTCCCGACTCTGGTCCCGGCACTaGCACTCACACTGGGGACGGACCTGCACGGTCACTGTATCCGTG | + |
Preference number: 5 (lower is better) Translates to: PLPPQRLCSRLWSRH*HSHWGRTCTVTVSV Trigger: CACGGATACAGTGACCGTGCAGGTCCGTCCCCAGTGTGAGTGTCAGTGCCGGGACCAGAGTCGGGAGCAGAGTCTCTGTGGAGGCAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS TCA 90 bp | GTGCCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCCTGGTCCAGTaGAGTTCAGCTTCTGGCACCAGGAACAGCCAGGCCCCGACTGGA | + |
Preference number: 5 (lower is better) Translates to: VPVCHSARSQVLLVQ*SSASGTRNSQAPTG Trigger: TCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACACACGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 90 bp | CAGCAGCTGTGCCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCAGCTTCTGGCACCAGGAACAGCCAGGCCC | + |
Preference number: 5 (lower is better) Translates to: QQLCPCVTAQGVRFS*SSEVQLLAPGTARP Trigger: GGGCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACACACGGGCACAGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCACATTGGGGCCCTTCATCCCCGCCCAGCTTCTaGACGTTGTTGAGGTCATCA | + |
Preference number: 5 (lower is better) Translates to: VRHLPRCPLRWQPHWGPSSPPSF*TLLRSS Trigger: TGATGACCTCAACAACGTCAAGAAGCTGGGCGGGGA...TGAAGGGCCCCAATGTGGCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTGACTCGGTGATCTCGTaGAGGGCCTGCAGCAAGTCC | + |
Preference number: 5 (lower is better) Translates to: AERNRAGFWILGSTGVSCDSVIS*RACSKS Trigger: GGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTC...ACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GAGGAGGACACCAATCAGTACGACACCTACCACGGTGCCCCCTACGATGGCAGCCGGACATGCAGCAACTaGCATTATGGCATCCAGCCC | + |
Preference number: 5 (lower is better) Translates to: EEDTNQYDTYHGAPYDGSRTCSN*HYGIQP Trigger: GGGCTGGATGCCATAATGCAAGTTGCTGCATGTCCG...GCTGCCATCGTAGGGGGCACCGTGGTAGGTGTCGTACTGATTGGTGTCCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGTGGCAGCGGCCATCATaGGGGGTCAGGATGGCACCC | + |
Preference number: 5 (lower is better) Translates to: ERNRAGFWILGSTGVSCKWQRPS*GVRMAP Trigger: GGGTGCCATCCTGACCCCCAATGATGGCCGCTGCCA...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCGCACAAGAGGTGTGGTaGTCCCTGCAGTGCGAGCCA | + |
Preference number: 5 (lower is better) Translates to: MAERNRAGFWILGSTGVSAQEVW*SLQCEP Trigger: TGGCTCGCACTGCAGGGACAACCACACCTCTTGTGC...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS TCA 90 bp | TTTGCCACAGTTGCAGGAACCCCGATCTGCAGATACCACACTCCATaGCTCCCTTGCCTCCACAGAGACTCTGCTCCCGACTCTGGTCCC | + |
Preference number: 5 (lower is better) Translates to: FATVAGTPICRYHTP*LPCLHRDSAPDSGP Trigger: GGGACCAGAGTCGGGAGCAGAGTCTCTGTGGAGGCAAGGGAGTCATGGAGTGTGGTATCTGCAGATCGGGGTTCCTGCAACTGTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS GCA 90 bp | ACACTGGGGACGGACCTGCACGGTCACTGTATCCGTGAAACCCAGTaGCCGGATGACAAAGGACTGCTCCTGGATACACTCGGAAGCCAT | + |
Preference number: 5 (lower is better) Translates to: TLGTDLHGHCIRETQ*PDDKGLLLDTLGSH Trigger: ATGGCTTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGATACAGTGACCGTGCAGGTCCGTCCCCAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 90 bp | GCAGCTCTTACCAGCTTCTGGCACCAGGAACAGCCAGGCCCCGACTaGATACAGTCCCGGCAACTGCTGACTTTGTACTTGGTGCATTCC | + |
Preference number: 5 (lower is better) Translates to: AALTSFWHQEQPGPD*IQSRQLLTLYLVHS Trigger: GGAATGCACCAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGGTAAGAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS-3UTR CAA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTCAATGGGGTATCCCTaGGCCCGCCGGAAAGTCACA | + |
Preference number: 5 (lower is better) Translates to: MAERNRAGFWILGSTGVSSMGYP*ARRKVT Trigger: TGTGACTTTCCGGCGGGCCAAGGGATACCCCATTGA...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | ATCAAACTTCAGGCACTCGGCACAAGAGGTGTGGTTGTCCCTGCAGTGCGAGCCTGGCAGGCCTTCTCCTaGTTGGGACATGGGTTCCTC | + |
Preference number: 5 (lower is better) Translates to: IKLQALGTRGVVVPAVRAWQAFS*LGHGFL Trigger: GAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCA...GGCTCGCACTGCAGGGACAACCACACCTCTTGTGCCGAGTGCCTGAAGTTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS CCA 90 bp | CCAGTGAAGTTCAGCTTCTGGCACCAGGAACAGCCAGGCCCCGACTaGATACAGTCCCGGCAACTGCTGACTTTGTACTTGGTGCATTCC | + |
Preference number: 5 (lower is better) Translates to: PVKFSFWHQEQPGPD*IQSRQLLTLYLVHS Trigger: GGAATGCACCAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTCAGGCCTTCTCCTTGTaGGGACATGGGTTCCTCAGC | + |
Preference number: 5 (lower is better) Translates to: GWNLLGLGTILRALRQDCQAFSL*GHGFLS Trigger: GCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTG...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | TGGCAGCCACATTGGGGCCCTTCACACACTCTAGACTGTCCTCCACATGGATGTCAGGCCTTCTCCTTGTaGGGACATGGGTTCCTCAGC | + |
Preference number: 5 (lower is better) Translates to: WQPHWGPSHTLDCPPHGCQAFSL*GHGFLS Trigger: GCTGAGGAACCCATGTCCCAACAAGGAGAAGGCCTG...ACATCCATGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS CCA 90 bp | ACTGTATCCGTGAAACCCAGTGCCCGGATGACAAAGGACTGCTCCTaGATACACTCGGAAGCCATGACCTTTACCTGGAAGGTGACCGGG | + |
Preference number: 5 (lower is better) Translates to: TVSVKPSARMTKDCS*IHSEAMTFTWKVTG Trigger: CCCGGTCACCTTCCAGGTAAAGGTCATGGCTTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGATACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CCACGTTGTGTTTGCAGAGGGGAGGAGGCGTGGTCTGAGGGGGTCACATCTGCTAGCTTCTTGACGTTGTaGAGGTCATCAAGCATGGAG | + |
Preference number: 5 (lower is better) Translates to: PRCVCRGEEAWSEGVTSASFLTL*RSSSME Trigger: CTCCATGCTTGATGACCTCAACAACGTCAAGAAGCT...AGCAGATGTGACCCCCTCAGACCACGCCTCCTCCCCTCTGCAAACACAACGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CTAGACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCATGGCAGCGGCCATCATaGGGGGTCAGGATGGCACCC | + |
Preference number: 5 (lower is better) Translates to: LDCPPHGCCKCSFRPSAAWQRPS*GVRMAP Trigger: GGGTGCCATCCTGACCCCCAATGATGGCCGCTGCCA...TGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS GCA 90 bp | ACGGTCACTGTATCCGTGAAACCCAGTGCCCGGATGACAAAGGACTaGTCCTGGATACACTCGGAAGCCATGACCTTTACCTGGAAGGTG | + |
Preference number: 5 (lower is better) Translates to: TVTVSVKPSARMTKD*SWIHSEAMTFTWKV Trigger: CACCTTCCAGGTAAAGGTCATGGCTTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGATACAGTGACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS GCA 90 bp | CTTTGTTGGGGACGTCACTGGTATGGCATACACACTGCCCACAGATaGAGTCCCCAAGCCCTGAGCACACGATGGAACTATTGTCCTTCC | + |
Preference number: 5 (lower is better) Translates to: LCWGRHWYGIHTAHR*SPQALSTRWNYCPS Trigger: GGAAGGACAATAGTTCCATCGTGTGCTCAGGGCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CCA 90 bp | TCGCAGTATTGCCCAAAGATCTCTTTGTTGGGGACGTCACTGGTATaGCATACACACTGCCCACAGATGCAGTCCCCAAGCCCTGAGCAC | + |
Preference number: 5 (lower is better) Translates to: SQYCPKISLLGTSLV*HTHCPQMQSPSPEH Trigger: GTGCTCAGGGCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCAATACTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CCA 90 bp | CACACTCGCAGTATTGCCCAAAGATCTCTTTGTTGGGGACGTCACTaGTATGGCATACACACTGCCCACAGATGCAGTCCCCAAGCCCTG | + |
Preference number: 5 (lower is better) Translates to: HTRSIAQRSLCWGRH*YGIHTAHRCSPQAL Trigger: CAGGGCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCAATACTGCGAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CAA 90 bp | ATGGCGGAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCCTGCTGACTTTGTACTaGGTGCATTCCTGGGACACA | + |
Preference number: 5 (lower is better) Translates to: MAERNRAGFWILGSTGVSLLTLY*VHSWDT Trigger: TGTGTCCCAGGAATGCACCAAGTACAAAGTCAGCAG...GCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTCCGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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CDS-3UTR CAA 90 bp | CCTACGATGGCAGCCACATTGGGGCCCTTCACACACTCTAGACTGTCCTCCACACCCAGCTTCTTGACGTaGTTGAGGTCATCAAGCATG | + |
Preference number: 5 (lower is better) Translates to: PTMAATLGPFTHSRLSSTPSFLT*LRSSSM Trigger: CATGCTTGATGACCTCAACAACGTCAAGAAGCTGGG...TGTGGAGGACAGTCTAGAGTGTGTGAAGGGCCCCAATGTGGCTGCCATCGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCTGGCAGGCCTTCTCCTaGTTGGGACATGGGTTCCTC | + |
Preference number: 5 (lower is better) Translates to: QENVGGTSWDSGQFLGLCWQAFS*LGHGFL Trigger: GAGGAACCCATGTCCCAACAAGGAGAAGGCCTGCCA...GCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCAAGATTGTGGCTTGCAACTACATTaGCCACAGTTGCAGGAACCC | + |
Preference number: 5 (lower is better) Translates to: GWNLLGLGTILRALRQDCGLQLH*PQLQEP Trigger: GGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGCC...ACAATCTTGCCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS TCA 90 bp | ACTGGTATGGCATACACACTGCCCACAGATGCAGTCCCCAAGCCCTaGGCACACGATGGAACTATTGTCCTTCCGACAGTTTCTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: TGMAYTLPTDAVPKP*AHDGTIVLPTVSLQ Trigger: CTGGAGAGAAACTGTCGGAAGGACAATAGTTCCATCGTGTGCTCAGGGCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS GCA 90 bp | CCAAAGATCTCTTTGTTGGGGACGTCACTGGTATGGCATACACACTaGCCACAGATGCAGTCCCCAAGCCCTGAGCACACGATGGAACTA | + |
Preference number: 5 (lower is better) Translates to: PKISLLGTSLVWHTH*PQMQSPSPEHTMEL Trigger: TAGTTCCATCGTGTGCTCAGGGCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CAA 90 bp | TTCAGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTTCAATGGGGTATCCCTaGGCCCGCCGGAAAGTCACA | + |
Preference number: 5 (lower is better) Translates to: FSKLGVHDRCRSTLEEGVSMGYP*ARRKVT Trigger: TGTGACTTTCCGGCGGGCCAAGGGATACCCCATTGA...AACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GAAAGAAACCGAGCAGGCTTTTGGATCCTTGGCAGCACTGGGGTGAGCTGTAAGAAAGGCAGCACCGTCTaGTCCACAAACGACCCAAAG | + |
Preference number: 5 (lower is better) Translates to: ERNRAGFWILGSTGVSCKKGSTV*STNDPK Trigger: CTTTGGGTCGTTTGTGGACAAGACGGTGCTGCCTTT...CTTACAGCTCACCCCAGTGCTGCCAAGGATCCAAAAGCCTGCTCGGTTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GTCGGAAGACAAGTCCCTGGAAACCCTGGCAGACTTGATATAATGGCGGAAAGACACTCCATGACTCCCTaGCCTCCACAGAGACTCTGC | + |
Preference number: 5 (lower is better) Translates to: VGRQVPGNPGRLDIMAERHSMTP*PPQRLC Trigger: GCAGAGTCTCTGTGGAGGCAAGGGAGTCATGGAGTG...TCTTTCCGCCATTATATCAAGTCTGCCAGGGTTTCCAGGGACTTGTCTTCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | AGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGCCCAGCTTCTTGACGTaGTTGAGGTCATCAAGCATG | + |
Preference number: 5 (lower is better) Translates to: RKCGWNLLGLGTILRALRPSFLT*LRSSSM Trigger: CATGCTTGATGACCTCAACAACGTCAAGAAGCTGGG...CCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCAAAGTGTAGACTCGGTGATCTCGTaGAGGGCCTGCAGCAAGTCC | + |
Preference number: 5 (lower is better) Translates to: VLHMDVVNVPSVLLLQSVDSVIS*RACSKS Trigger: GGACTTGCTGCAGGCCCTCAACGAGATCACCGAGTC...TACACTTTGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | AGCAAACTTGGGGTTCATGACCGTTGTCGTAGCACTCTTGAAGAGGGGGTTGTCAAAGGCAGCACCGTCTaGTCCACAAACGACCCAAAG | + |
Preference number: 5 (lower is better) Translates to: SKLGVHDRCRSTLEEGVVKGSTV*STNDPK Trigger: CTTTGGGTCGTTTGTGGACAAGACGGTGCTGCCTTT...GACAACCCCCTCTTCAAGAGTGCTACGACAACGGTCATGAACCCCAAGTTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | ATCCAACAGCCTTCCGAGTCCCTCTCCTTGCAGGGCTTTTTCTTCAAAGGGATAAGGATGGCACCCAGTTaGCCATCACCAGCAAAGTGG | + |
Preference number: 5 (lower is better) Translates to: IQQPSESLSLQGFFFKGIRMAPS*PSPAKW Trigger: CCACTTTGCTGGTGATGGCAAACTGGGTGCCATCCT...TATCCCTTTGAAGAAAAAGCCCTGCAAGGAGAGGGACTCGGAAGGCTGTTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | AGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGTCCCCCACTGCTGACTaGGGGATGATCTCCGTGAGT | + |
Preference number: 5 (lower is better) Translates to: RLLSSFMQENVGGTSWDSSPTAD*GMISVS Trigger: ACTCACGGAGATCATCCCCAAGTCAGCAGTGGGGGA...CGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CTAGACTGTCCTCCACATGGATGTTGTAAATGTTCCTTCCGTCCTTCTGCTGCACACTCCATGACTCCCTaGCCTCCACAGAGACTCTGC | + |
Preference number: 5 (lower is better) Translates to: LDCPPHGCCKCSFRPSAAHSMTP*PPQRLC Trigger: GCAGAGTCTCTGTGGAGGCAAGGGAGTCATGGAGTG...TGCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS TCA 90 bp | ACCGGGCTTGCAACTACATTTGCCACAGTTGCAGGAACCCCGATCTaGGCCACCGCAGACTTGGCTGTTATATCTCTCACAGTTGACATT | + |
Preference number: 5 (lower is better) Translates to: TGLATTFATVAGTPI*ATADLAVISLTVDI Trigger: AATGTCAACTGTGAGAGATATAACAGCCAAGTCTGCGGTGGCTCAGATCGGGGTTCCTGCAACTGTGGCAAATGTAGTTGCAAGCCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS-3UTR CAA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATCCCCGCCCAGCTTCTaGACGTTGTTGAGGTCATCA | + |
Preference number: 5 (lower is better) Translates to: LSSFMQENVGGTSWDSGQSPPSF*TLLRSS Trigger: TGATGACCTCAACAACGTCAAGAAGCTGGGCGGGGA...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACCGGACATGCAGCAACTaGCATTATGGCATCCAGCCC | + |
Preference number: 5 (lower is better) Translates to: LRLLSSFMQENVGGTSWDRTCSN*HYGIQP Trigger: GGGCTGGATGCCATAATGCAAGTTGCTGCATGTCCG...GTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGAGGATGGCACCCAGTTaGCCATCACCAGCAAAGTGG | + |
Preference number: 5 (lower is better) Translates to: VGATFTETAVFLYARKCGRMAPS*PSPAKW Trigger: CCACTTTGCTGGTGATGGCAAACTGGGTGCCATCCT...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GTTCTTCTCAAAAGGGCCCTTATCAAACTTCAGGCACTCGGCACAAGAGGTGTGCTGCTGACTTTGTACTaGGTGCATTCCTGGGACACA | + |
Preference number: 5 (lower is better) Translates to: VLLKRALIKLQALGTRGVLLTLY*VHSWDT Trigger: TGTGTCCCAGGAATGCACCAAGTACAAAGTCAGCAG...CACACCTCTTGTGCCGAGTGCCTGAAGTTTGATAAGGGCCCTTTTGAGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153541.2 ENSMUST00000156644.8 |
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CDS-3UTR CAA 90 bp | GTTGGGGCCACCTTTACTGAGACTGCTGTCTTCCTTTATGCAAGAAAATGTGGGGTTTCCGGAAATCAGTaGCTTGCCGACCTCTGTCTG | + |
Preference number: 5 (lower is better) Translates to: VGATFTETAVFLYARKCGVSGNQ*LADLCL Trigger: CAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAAC...CCCACATTTTCTTGCATAAAGGAAGACAGCAGTCTCAGTAAAGGTGGCCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | AGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAATTCTTAGGGCTCTGCGGAACTCATTGCTCCTCTaGTACATGTTATCCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: RKCGWNLLGLGTILRALRNSLLL*YMLSSR Trigger: CCTGGAGGATAACATGTACAAGAGGAGCAATGAGTT...CCGCAGAGCCCTAAGAATTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CTTTTTCTTCAAAGGGATAGTCTGCAGCGTCATACCAGCACACTGAACACTACATCCCCCACTGCTGACTaGGGGATGATCTCCGTGAGT | + |
Preference number: 5 (lower is better) Translates to: LFLQRDSLQRHTSTLNTTSPTAD*GMISVS Trigger: ACTCACGGAGATCATCCCCAAGTCAGCAGTGGGGGA...TGTAGTGTTCAGTGTGCTGGTATGACGCTGCAGACTATCCCTTTGAAGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CTGTCTTCCTTTATGCAAGAAAATGTGGGTGGAACCTCTTGGGACTCGGGACAACTGCTGACTTTGTACTaGGTGCATTCCTGGGACACA | + |
Preference number: 5 (lower is better) Translates to: LSSFMQENVGGTSWDSGQLLTLY*VHSWDT Trigger: TGTGTCCCAGGAATGCACCAAGTACAAAGTCAGCAG...TTGTCCCGAGTCCCAAGAGGTTCCACCCACATTTTCTTGCATAAAGGAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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CDS-3UTR CAA 90 bp | ACTGAACACTACAGTTCTTCTCAAAAGGGCCCTTATCAAACTTCAGGCACTCGGGTTTCCGGAAATCAGTaGCTTGCCGACCTCTGTCTG | + |
Preference number: 5 (lower is better) Translates to: TEHYSSSQKGPYQTSGTRVSGNQ*LADLCL Trigger: CAGACAGAGGTCGGCAAGCAACTGATTTCCGGAAAC...CCGAGTGCCTGAAGTTTGATAAGGGCCCTTTTGAGAAGAACTGTAGTGTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | GGGGGTCACATCTGCTTGATTATGATAACTCATGCTCTAGCTTTCAGCAAACTTAACTCATTGCTCCTCTaGTACATGTTATCCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: GGHICLIMITHALAFSKLNSLLL*YMLSSR Trigger: CCTGGAGGATAACATGTACAAGAGGAGCAATGAGTT...AAGTTTGCTGAAAGCTAGAGCATGAGTTATCATAATCAAGCAGATGTGACCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS-3UTR CAA 90 bp | CACAAAGCTTACCTTCCATGGACAGCATGGATGGAAGCTTTATTATTTTTCATAAGCTTCTTGACGTTGTaGAGGTCATCAAGCATGGAG | + |
Preference number: 5 (lower is better) Translates to: HKAYLPWTAWMEALLFFISFLTL*RSSSME Trigger: CTCCATGCTTGATGACCTCAACAACGTCAAGAAGCT...TATGAAAAATAATAAAGCTTCCATCCATGCTGTCCATGGAAGGTAAGCTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS TCA 72 bp | CCACAGAGACTCTGCTCCCGACTCTGGTCCCGGCACTaGCACTCACACTGGGGACGGACCTGCACGGTCACT | + |
Preference number: 6 (lower is better) Translates to: PQRLCSRLWSRH*HSHWGRTCTVT Trigger: AGTGACCGTGCAGGTCCGTCCCCAGTGTGAGTGTCAGTGCCGGGACCAGAGTCGGGAGCAGAGTCTCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS TCA 72 bp | TGTCACAGCGCAAGGAGTCAGGTTCTCCTGGTCCAGTaGAGTTCAGCTTCTGGCACCAGGAACAGCCAGGCC | + |
Preference number: 6 (lower is better) Translates to: CHSARSQVLLVQ*SSASGTRNSQA Trigger: GGCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS TCA 72 bp | GTTGCAGGAACCCCGATCTGCAGATACCACACTCCATaGCTCCCTTGCCTCCACAGAGACTCTGCTCCCGAC | + |
Preference number: 6 (lower is better) Translates to: VAGTPICRYHTP*LPCLHRDSAPD Trigger: GTCGGGAGCAGAGTCTCTGTGGAGGCAAGGGAGTCATGGAGTGTGGTATCTGCAGATCGGGGTTCCTGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153541.2 |
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CDS CCA 72 bp | GAGTCAGGTTCTCCTGGTCCAGTGAAGTTCAGCTTCTaGCACCAGGAACAGCCAGGCCCCGACTGGATACAG | + |
Preference number: 6 (lower is better) Translates to: ESGSPGPVKFSF*HQEQPGPDWIQ Trigger: CTGTATCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGAACTTCACTGGACCAGGAGAACCTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | ACCAGCTTCTGGCACCAGGAACAGCCAGGCCCCGACTaGATACAGTCCCGGCAACTGCTGACTTTGTACTTG | + |
Preference number: 6 (lower is better) Translates to: TSFWHQEQPGPD*IQSRQLLTLYL Trigger: CAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156644.8 |
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CDS CAA 90 bp | CCAGGCCCCGACTGGATACAGTCCCGGCAACTGCTGACTTTGTACTaGGTGCATTCCTGGGACACAGCAGATCCCAGGAAGAACAGTCCA | + |
Preference number: 6 (lower is better) Translates to: PGPDWIQSRQLLTLY*VHSWDTADPRKNSP Trigger: TGGACTGTTCTTCCTGGGATCTGCTGTGTCCCAGGAATGCACCAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTCGGGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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CDS TCA 72 bp | TGTAGCCAGACTCACACCTGCAGATACCACACTCCATaGCTCCCTTGCCTCCACAGAGACTCTGCTCCCGAC | + |
Preference number: 6 (lower is better) Translates to: CSQTHTCRYHTP*LPCLHRDSAPD Trigger: GTCGGGAGCAGAGTCTCTGTGGAGGCAAGGGAGTCATGGAGTGTGGTATCTGCAGGTGTGAGTCTGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS GCA 72 bp | ACGGACCTGCACGGTCACTGTATCCGTGAAACCCAGTaGCCGGATGACAAAGGACTGCTCCTGGATACACTC | + |
Preference number: 6 (lower is better) Translates to: TDLHGHCIRETQ*PDDKGLLLDTL Trigger: GAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGATACAGTGACCGTGCAGGTCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | TTCAGCTTCTGGCACCAGGAACAGCCAGGCCCCGACTaGATACAGTCCCGGCAACTGCTGACTTTGTACTTG | + |
Preference number: 6 (lower is better) Translates to: FSFWHQEQPGPD*IQSRQLLTLYL Trigger: CAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTCGGGGCCTGGCTGTTCCTGGTGCCAGAAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | TGCCCGTGTGTCACAGCGCAAGGAGTCAGGTTCTCCTaGTCCAGTGAAGTTCAGCTTCTGGCACCAGGAACA | + |
Preference number: 6 (lower is better) Translates to: CPCVTAQGVRFS*SSEVQLLAPGT Trigger: TGTTCCTGGTGCCAGAAGCTGAACTTCACTGGACCAGGAGAACCTGACTCCTTGCGCTGTGACACACGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | GCCCACAGATGCAGTCCCCAAGCCCTGAGCACACGATaGAACTATTGTCCTTCCGACAGTTTCTCTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: AHRCSPQALSTR*NYCPSDSFSPA Trigger: AGCTGGAGAGAAACTGTCGGAAGGACAATAGTTCCATCGTGTGCTCAGGGCTTGGGGACTGCATCTGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CAA 72 bp | TCGGAAGCCATGACCTTTACCTGGAAGGTGACCGGGTaGTTGATCTGTACGCCATCACAGTCCCCACGGGAT | + |
Preference number: 6 (lower is better) Translates to: SEAMTFTWKVTG*LICTPSQSPRD Trigger: ATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGGTCACCTTCCAGGTAAAGGTCATGGCTTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS GCA 72 bp | GTATCCGTGAAACCCAGTGCCCGGATGACAAAGGACTaGTCCTGGATACACTCGGAAGCCATGACCTTTACC | + |
Preference number: 6 (lower is better) Translates to: VSVKPSARMTKD*SWIHSEAMTFT Trigger: GGTAAAGGTCATGGCTTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCACGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | GTGAAACCCAGTGCCCGGATGACAAAGGACTGCTCCTaGATACACTCGGAAGCCATGACCTTTACCTGGAAG | + |
Preference number: 6 (lower is better) Translates to: VKPSARMTKDCS*IHSEAMTFTWK Trigger: CTTCCAGGTAAAGGTCATGGCTTCCGAGTGTATCCAGGAGCAGTCCTTTGTCATCCGGGCACTGGGTTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CCA 72 bp | TGCCCAAAGATCTCTTTGTTGGGGACGTCACTGGTATaGCATACACACTGCCCACAGATGCAGTCCCCAAGC | + |
Preference number: 6 (lower is better) Translates to: CPKISLLGTSLV*HTHCPQMQSPS Trigger: GCTTGGGGACTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CAA 72 bp | GACTGGATACAGTCCCGGCAACTGCTGACTTTGTACTaGGTGCATTCCTGGGACACAGCAGATCCCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: DWIQSRQLLTLY*VHSWDTADPRK Trigger: CTTCCTGGGATCTGCTGTGTCCCAGGAATGCACCAAGTACAAAGTCAGCAGTTGCCGGGACTGTATCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 ENSMUST00000156644.8 |
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CDS CAA 72 bp | GAAGCCATGACCTTTACCTGGAAGGTGACCGGGTTGTaGATCTGTACGCCATCACAGTCCCCACGGGATTTG | + |
Preference number: 6 (lower is better) Translates to: EAMTFTWKVTGL*ICTPSQSPRDL Trigger: CAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGGTCACCTTCCAGGTAAAGGTCATGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CAA 90 bp | ATACACTCGGAAGCCATGACCTTTACCTGGAAGGTGACCGGGTTGTaGATCTGTACGCCATCACAGTCCCCACGGGATTTGCCTATACTC | + |
Preference number: 6 (lower is better) Translates to: IHSEAMTFTWKVTGL*ICTPSQSPRDLPIL Trigger: GAGTATAGGCAAATCCCGTGGGGACTGTGATGGCGTACAGATCAACAACCCGGTCACCTTCCAGGTAAAGGTCATGGCTTCCGAGTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000299.14 ENSMUST00000153541.2 |
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CDS CAA 90 bp | CAGTTGACATTGTCACACTCGCAGTATTGCCCAAAGATCTCTTTGTaGGGGACGTCACTGGTATGGCATACACACTGCCCACAGATGCAG | + |
Preference number: 6 (lower is better) Translates to: QLTLSHSQYCPKISL*GTSLVWHTHCPQMQ Trigger: CTGCATCTGTGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCAATACTGCGAGTGTGACAATGTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CAA 72 bp | TTGTCACACTCGCAGTATTGCCCAAAGATCTCTTTGTaGGGGACGTCACTGGTATGGCATACACACTGCCCA | + |
Preference number: 6 (lower is better) Translates to: LSHSQYCPKISL*GTSLVWHTHCP Trigger: TGGGCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCAATACTGCGAGTGTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |
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CDS CAA 72 bp | ACATTGTCACACTCGCAGTATTGCCCAAAGATCTCTTaGTTGGGGACGTCACTGGTATGGCATACACACTGC | + |
Preference number: 6 (lower is better) Translates to: TLSHSQYCPKIS*LGTSLVWHTHC Trigger: GCAGTGTGTATGCCATACCAGTGACGTCCCCAACAAAGAGATCTTTGGGCAATACTGCGAGTGTGACAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000299.14 |