Pregenerated sensors for ITGB1BP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031312Ensembl transcript IDs: ENSMUST00000033674.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AGAATAGAAGGTTTATTCAGGGGAGCAGAGGCACATTTGCACATTTaGTTCTCTCCTCCTTTAGCTTCCTGCTGCCCAGTGACACCACAC | + |
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Preference number: 2 (lower is better) Translates to: RIEGLFRGAEAHLHI*FSPPLASCCPVTPH Trigger: GTGTGGTGTCACTGGGCAGCAGGAAGCTAAAGGAGGAGAGAACAAAATGTGCAAATGTGCCTCTGCTCCCCTGAATAAACCTTCTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCCTGGGCCCAGGATCCTaGGTCAGCCTTGACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLLPSDTTRSTISWSLRFLGPGS*VSLDQG Trigger: TCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAG...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR TCA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCATCCTGGGTCAGCCTTaGCCAGGGAGATTTCAACCC | + |
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Preference number: 4 (lower is better) Translates to: FLLPSDTTRSTISWSLRFILGQP*PGRFQP Trigger: GGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGAT...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGCTGGGTTCTGGCAGCTaGAACCAGTCCAGATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSFLLPSDTTRSTISWSLLGSGS*NQSRSD Trigger: GTCTGATCTGGACTGGTTCCAGCTGCCAGAACCCAG...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGTCACATCCTGGGTTCTaGCAGCTGGAACCAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FSFLLPSDTTRSTISWSLSHPGF*QLEPVQ Trigger: CTGGACTGGTTCCAGCTGCCAGAACCCAGGATGTGA...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCAACAGCATCACATCCTaGGTTCTGGCAGCTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: FLLPSDTTRSTISWSLRFNSITS*VLAAGT Trigger: GGTTCCAGCTGCCAGAACCCAGGATGTGATGCTGTT...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAAGTCTGGTGCCAATCATaGCGGCAAGATGCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQVWCQS*RQDAGS Trigger: GCTGCCAGCATCTTGCCGCCATGATTGGCACCAGAC...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGTCTACATCCTGGCTGTaGCAGGAATGCCCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FSFLLPSDTTRSTISWSLSTSWL*QECPKI Trigger: GATTTTGGGGCATTCCTGGCACAGCCAGGATGTAGA...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCAAAGAGACAGAGCTCTaGTCCACGTTTATGACCCCC | + |
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Preference number: 4 (lower is better) Translates to: FLLPSDTTRSTISWSLRFKETEL*STFMTP Trigger: GGGGGTCATAAACGTGGAGCAGAGCTCTGTCTCTTT...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCTGCATCATGAAAGATTaGCACCCCAGGGTGATAGCG | + |
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Preference number: 4 (lower is better) Translates to: FLLPSDTTRSTISWSLRFCIMKD*HPRVIA Trigger: CGCTATCACCCTGGGGTGCCAATCTTTCATGATGCA...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTACCAACTCTACATCCTaGCTGTGCCAGGAATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSEILRRSLRAYLETQLSTNSTS*LCQECP Trigger: GGGGCATTCCTGGCACAGCCAGGATGTAGAGTTGGT...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTATGGCGGCAAGATGCTaGCAGCTGCTTTGCCCAATC | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVMAARC*QLLCPI Trigger: GATTGGGCAAAGCAGCTGCCAGCATCTTGCCGCCAT...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR TCA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTTTTTTGCTCCTGAAGTaGACTTGTGGCAGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSEILRRSLRAYLETQLSFLLLK*TCGRAL Trigger: GAGGGCCCTGCCACAAGTTCACTTCAGGAGCAAAAA...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR TCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAATGGCCTTCACCCAGTTaGATGCAGGAAGCGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQWPSPS*MQEAES Trigger: AGATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCA...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAATGGCTGTGCCAGGAATaGCCCAAAATCCAGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQWLCQE*PKIQSL Trigger: CAGACTCTGGATTTTGGGGCATTCCTGGCACAGCCA...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTCTTCACCCAGTTGAATaGAGGAAGCGGAATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSEILRRSLRAYLETQLSLHPVE*RKRNLA Trigger: GGCCAGATTCCGCTTCCTGCATTCAACTGGGTGAAG...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAATGCTGGCAGCTGCTTTaGCCAATCATGTCTACCAAC | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQCWQLL*PIMSTN Trigger: GTTGGTAGACATGATTGGGCAAAGCAGCTGCCAGCA...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTACAGAGTCTGTCTGGTaGCAATCATGGCGGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSEILRRSLRAYLETQLSTESVW*QSWRQD Trigger: ATCTTGCCGCCATGATTGGCACCAGACAGACTCTGT...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTCCAGAGCTTCATCTGTaGTTGGAACACACGGTTACC | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVPELHL*LEHTVT Trigger: GGTAACCGTGTGTTCCAAGCACAGATGAAGCTCTGG...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACAGGGAGATTGGTATTaGGGTCAAAGTGTTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQQGDWY*GQSVAH Trigger: GTGGGCAACACTTTGACCCCAATACCAATCTCCCTG...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTACTACAGAGTCTGTCTaGTGCCAATCATGGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSEILRRSLRAYLETQLSTTESV*CQSWRQ Trigger: TTGCCGCCATGATTGGCACCAGACAGACTCTGTAGT...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR TCA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAAGGAGATTTCAACCCGTaGTGGCATCAAAGAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: ILVSEILRRSLRAYLETQGDFNP*WHQRDR Trigger: TCTGTCTCTTTGATGCCATCACGGGTTGAAATCTCC...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGGAATCAGGGAGATTaGTATTGGGGTCAAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: FSFLLPSDTTRSTISWSLRNQGD*YWGQSV Trigger: AACACTTTGACCCCAATACCAATCTCCCTGATTCCT...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR TCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTCCACAGTACAGCCCTTaGTGTTTAAGAACTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVPQYSP*CLRTQR Trigger: TCTCTGAGTTCTTAAACATCAAGGGCTGTACTGTGG...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR GCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTGGACCAACCCTTAAGTaGATCATGAAAGATTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVGPTLK*IMKDWH Trigger: GTGCCAATCTTTCATGATGCACTTAAGGGTTGGTCC...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTCCAAAATCCAGAGTCTaGATACCACAACAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVPKSRV*IPQQLQ Trigger: TTGGAGCTGTTGTGGTATCCAGACTCTGGATTTTGG...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CCA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTAGCTTCATCTGTGCTTaGAACACACGGTTACCATCA | + |
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Preference number: 4 (lower is better) Translates to: EILRRSLRAYLETQLSAVSFICA*NTRLPS Trigger: TGATGGTAACCGTGTGTTCCAAGCACAGATGAAGCT...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 90 bp | TCTAGTAAAACCCCTGCCCTAGCCTTCTCAGCTAGTGAATCAGGGTaGTCCAGCTGGGCCCAGGATCCTGGGTCAGCCTTGACCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSKTPALAFSASESG*SSWAQDPGSALTRE Trigger: CTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAGCTGGAGCACCCTGATTCACTAGCTGAGAAGGCTAGGGCAGGGGTTTTACTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS TCA 90 bp | GTGAATCAGGGTGCTCCAGCTGGGCCCAGGATCCTGGGTCAGCCTTaGCCAGGGAGATTTCAACCCGTGATGGCATCAAAGAGACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VNQGAPAGPRILGQP*PGRFQPVMASKRQS Trigger: GCTCTGTCTCTTTGATGCCATCACGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAGCTGGAGCACCCTGATTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS TCA 90 bp | GGCCCAGGATCCTGGGTCAGCCTTGACCAGGGAGATTTCAACCCGTaGTGGCATCAAAGAGACAGAGCTCTGCTCCACGTTTATGACCCC | + |
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Preference number: 5 (lower is better) Translates to: GPGSWVSLDQGDFNP*WHQRDRALLHVYDP Trigger: GGGGTCATAAACGTGGAGCAGAGCTCTGTCTCTTTGATGCCATCACGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGGCTCCTGAAGTGAACTaGTGGCAGGGCCCTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FSFLLPSDTTRSTISWSLAPEVN*WQGPQA Trigger: AGCCTGAGGGCCCTGCCACAAGTTCACTTCAGGAGC...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 90 bp | TCTCAGGACCTTGGTAAACAGCATCACATCCTGGGTTCTGGCAGCTaGAACCAGTCCAGATCAGACTATTGTCAAGTCCTGCTCCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: SQDLGKQHHILGSGS*NQSRSDYCQVLLPV Trigger: AACCGGGAGCAGGACTTGACAATAGTCTGATCTGGACTGGTTCCAGCTGCCAGAACCCAGGATGTGATGCTGTTTACCAAGGTCCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 90 bp | TGCTGGCAGCTGCTTTGCCCAATCATGTCTACCAACTCTACATCCTaGCTGTGCCAGGAATGCCCCAAAATCCAGAGTCTGGATACCACA | + |
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Preference number: 5 (lower is better) Translates to: CWQLLCPIMSTNSTS*LCQECPKIQSLDTT Trigger: TGTGGTATCCAGACTCTGGATTTTGGGGCATTCCTGGCACAGCCAGGATGTAGAGTTGGTAGACATGATTGGGCAAAGCAGCTGCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGTCAGGGAGATTGGTATaGGGGTCAAAGTGTTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: FSFLLPSDTTRSTISWSLSGRLV*GSKCCP Trigger: TGGGCAACACTTTGACCCCAATACCAATCTCCCTGA...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | ATCCTGGTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGGCCTTCACCCAGTaGAATGCAGGAAGCGGAATC | + |
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Preference number: 5 (lower is better) Translates to: ILVSEILRRSLRAYLETQLAFTQ*NAGSGI Trigger: GATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCAG...TTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGACCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTGATCCTGGGTCAGCCTaGACCAGGGAGATTTCAACC | + |
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Preference number: 5 (lower is better) Translates to: EILRRSLRAYLETQLSAVDPGSA*TREIST Trigger: GGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATC...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 90 bp | CAGCTGCTTTGCCCAATCATGTCTACCAACTCTACATCCTGGCTGTaGCAGGAATGCCCCAAAATCCAGAGTCTGGATACCACAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: QLLCPIMSTNSTSWL*QECPKIQSLDTTTA Trigger: AGCTGTTGTGGTATCCAGACTCTGGATTTTGGGGCATTCCTGGCACAGCCAGGATGTAGAGTTGGTAGACATGATTGGGCAAAGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTGTGCATCATGAAAGATaGGCACCCCAGGGTGATAGC | + |
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Preference number: 5 (lower is better) Translates to: EILRRSLRAYLETQLSAVVHHER*APQGDS Trigger: GCTATCACCCTGGGGTGCCAATCTTTCATGATGCAC...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGTCCAGATCAGACTATaGTCAAGTCCTGCTCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: VSEILRRSLRAYLETQLSVQIRL*SSPAPG Trigger: ACCGGGAGCAGGACTTGACAATAGTCTGATCTGGAC...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | TTTAGCTTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGATCACTCTCAGGACCTaGGTAAACAGCATCACATCC | + |
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Preference number: 5 (lower is better) Translates to: FSFLLPSDTTRSTISWSLITLRT*VNSITS Trigger: GGATGTGATGCTGTTTACCAAGGTCCTGAGAGTGAT...CAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAAGCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS TCA 90 bp | AGACAATGTGGACATGAAGCTCAGTTTGACTGGCCTTCACCCAGTTaGATGCAGGAAGCGGAATCTGGCCATAGACCGTCAGCACTACTA | + |
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Preference number: 5 (lower is better) Translates to: RQCGHEAQFDWPSPS*MQEAESGHRPSALL Trigger: TAGTAGTGCTGACGGTCTATGGCCAGATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCAGTCAAACTGAGCTTCATGTCCACATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 90 bp | TGCCCAATCATGTCTACCAACTCTACATCCTGGCTGTGCCAGGAATaGCCCAAAATCCAGAGTCTGGATACCACAACAGCTCCAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: CPIMSTNSTSWLCQE*PKIQSLDTTTAPRL Trigger: AAGTCTTGGAGCTGTTGTGGTATCCAGACTCTGGATTTTGGGGCATTCCTGGCACAGCCAGGATGTAGAGTTGGTAGACATGATTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 90 bp | AATGTGGACATGAAGCTCAGTTTGACTGGCCTTCACCCAGTTGAATaGAGGAAGCGGAATCTGGCCATAGACCGTCAGCACTACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: NVDMKLSLTGLHPVE*RKRNLAIDRQHYYR Trigger: TCTGTAGTAGTGCTGACGGTCTATGGCCAGATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCAGTCAAACTGAGCTTCATGTCCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTATGCTGGCAGCTGCTTaGCCCAATCATGTCTACCAA | + |
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Preference number: 5 (lower is better) Translates to: VSEILRRSLRAYLETQLSMLAAA*PNHVYQ Trigger: TTGGTAGACATGATTGGGCAAAGCAGCTGCCAGCAT...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGACATGAAGCTCAGTTaGACTGGCCTTCACCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: VSEILRRSLRAYLETQLSDMKLS*TGLHPV Trigger: AACTGGGTGAAGGCCAGTCAAACTGAGCTTCATGTC...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTGAGCTTCATCTGTGCTaGGAACACACGGTTACCATC | + |
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Preference number: 5 (lower is better) Translates to: EILRRSLRAYLETQLSAVELHLC*EHTVTI Trigger: GATGGTAACCGTGTGTTCCAAGCACAGATGAAGCTC...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTGCTGTTCCCACAGTACAGCCCTaGATGTTTAAGAACTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: EILRRSLRAYLETQLSAVPTVQP*MFKNSE Trigger: CTCTGAGTTCTTAAACATCAAGGGCTGTACTGTGGG...AACAGCAGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | TTCCTGCTGCCCAGTGACACCACACGGTCAACCATATCCTGGTCTCTGAGATTCAGGTCTCTGCTGACTTaGGAATTGTATTTAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: FLLPSDTTRSTISWSLRFRSLLT*ELYLEV Trigger: AACCTCTAAATACAATTCCAAAGTCAGCAGAGACCT...GAATCTCAGAGACCAGGATATGGTTGACCGTGTGGTGTCACTGGGCAGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS-3UTR CAA 90 bp | GTCTCTGAGATTCTAAGGCGGTCACTGAGGGCCTACCTAGAAACTCAACTGTCTCTGCTGACTTTGGAATaGTATTTAGAGGTTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: VSEILRRSLRAYLETQLSLLTLE*YLEVFA Trigger: AGCAAAAACCTCTAAATACAATTCCAAAGTCAGCAG...AGACAGTTGAGTTTCTAGGTAGGCCCTCAGTGACCGCCTTAGAATCTCAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CAA 72 bp | GGGTGCTCCAGCTGGGCCCAGGATCCTGGGTCAGCCTaGACCAGGGAGATTTCAACCCGTGATGGCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: GCSSWAQDPGSA*TREISTRDGIK Trigger: TTTGATGCCATCACGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAGCTGGAGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CAA 90 bp | AGTGAATCAGGGTGCTCCAGCTGGGCCCAGGATCCTGGGTCAGCCTaGACCAGGGAGATTTCAACCCGTGATGGCATCAAAGAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: SESGCSSWAQDPGSA*TREISTRDGIKETE Trigger: CTCTGTCTCTTTGATGCCATCACGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGATCCTGGGCCCAGCTGGAGCACCCTGATTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 72 bp | CCAAGACTTCATCCCCTCATGAAACCGAGGTGCCCCTaGGTGATAGGTACACGGAGTAGCATCACTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRLHPLMKPRCP*VIGTRSSITLR Trigger: CCTGAGAGTGATGCTACTCCGTGTACCTATCACCCAGGGGCACCTCGGTTTCATGAGGGGATGAAGTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CAA 72 bp | GGGTTCTGGCAGCTGGAACCAGTCCAGATCAGACTATaGTCAAGTCCTGCTCCCGGTTCCTGGTCTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GFWQLEPVQIRL*SSPAPGSWSSS Trigger: GGAACTAGACCAGGAACCGGGAGCAGGACTTGACAATAGTCTGATCTGGACTGGTTCCAGCTGCCAGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS TCA 72 bp | TCCTGGGTCAGCCTTGACCAGGGAGATTTCAACCCGTaGTGGCATCAAAGAGACAGAGCTCTGCTCCACGTT | + |
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Preference number: 6 (lower is better) Translates to: SWVSLDQGDFNP*WHQRDRALLHV Trigger: AACGTGGAGCAGAGCTCTGTCTCTTTGATGCCATCACGGGTTGAAATCTCCCTGGTCAAGGCTGACCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS TCA 72 bp | GGACATGAAGCTCAGTTTGACTGGCCTTCACCCAGTTaGATGCAGGAAGCGGAATCTGGCCATAGACCGTCA | + |
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Preference number: 6 (lower is better) Translates to: GHEAQFDWPSPS*MQEAESGHRPS Trigger: TGACGGTCTATGGCCAGATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCAGTCAAACTGAGCTTCATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 72 bp | TACAGAGTCTGTCTGGTGCCAATCATGGCGGCAAGATaGTGGCAGCTGCTTTGCCCAATCATGTCTACCAAC | + |
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Preference number: 6 (lower is better) Translates to: YRVCLVPIMAAR*WQLLCPIMSTN Trigger: GTTGGTAGACATGATTGGGCAAAGCAGCTGCCAGCATCTTGCCGCCATGATTGGCACCAGACAGACTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 72 bp | ATGAAGCTCAGTTTGACTGGCCTTCACCCAGTTGAATaGAGGAAGCGGAATCTGGCCATAGACCGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: MKLSLTGLHPVE*RKRNLAIDRQH Trigger: GTGCTGACGGTCTATGGCCAGATTCCGCTTCCTGCATTCAACTGGGTGAAGGCCAGTCAAACTGAGCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 72 bp | CAGATCAGACTATTGTCAAGTCCTGCTCCCGGTTCCTaGTCTAGTTCCTTCTGTTCCAAAGCCACTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QIRLLSSPAPGS*SSSFCSKATPR Trigger: CCTGGGAGTGGCTTTGGAACAGAAGGAACTAGACCAGGAACCGGGAGCAGGACTTGACAATAGTCTGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 72 bp | ATCACTCTCAGGACCTTGGTAAACAGCATCACATCCTaGGTTCTGGCAGCTGGAACCAGTCCAGATCAGACT | + |
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Preference number: 6 (lower is better) Translates to: ITLRTLVNSITS*VLAAGTSPDQT Trigger: AGTCTGATCTGGACTGGTTCCAGCTGCCAGAACCCAGGATGTGATGCTGTTTACCAAGGTCCTGAGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS GCA 72 bp | ATGTCTACCAACTCTACATCCTGGCTGTGCCAGGAATaGCCCAAAATCCAGAGTCTGGATACCACAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: MSTNSTSWLCQE*PKIQSLDTTTA Trigger: AGCTGTTGTGGTATCCAGACTCTGGATTTTGGGGCATTCCTGGCACAGCCAGGATGTAGAGTTGGTAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 72 bp | CAGGGTGATAGCGACAGGAATCAGGGAGATTGGTATTaGGGTCAAAGTGTTGCCCACAGCCTTTGTTATAGC | + |
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Preference number: 6 (lower is better) Translates to: QGDSDRNQGDWY*GQSVAHSLCYS Trigger: GCTATAACAAAGGCTGTGGGCAACACTTTGACCCCAATACCAATCTCCCTGATTCCTGTCGCTATCACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CCA 72 bp | CTTGGTAAACAGCATCACATCCTGGGTTCTGGCAGCTaGAACCAGTCCAGATCAGACTATTGTCAAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGKQHHILGSGS*NQSRSDYCQVL Trigger: CAGGACTTGACAATAGTCTGATCTGGACTGGTTCCAGCTGCCAGAACCCAGGATGTGATGCTGTTTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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| CDS CAA 72 bp | ACAGGAATCAGGGAGATTGGTATTGGGGTCAAAGTGTaGCCCACAGCCTTTGTTATAGCAGAGCAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: TGIREIGIGVKV*PTAFVIAEQRH Trigger: ATGTCTCTGCTCTGCTATAACAAAGGCTGTGGGCAACACTTTGACCCCAATACCAATCTCCCTGATTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033674.6 |
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