Pregenerated sensors for ITGB1BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062352Ensembl transcript IDs: ENSMUST00000076260.12, ENSMUST00000172834.2, ENSMUST00000173688.2, ENSMUST00000173729.8, ENSMUST00000232072.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACCTCTGCATGTCTCAGTTCCAAGCAAGTGATCCCAAGTCCCTaGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACCTGGGATGAC | + |
|
Preference number: 1 (lower is better) Translates to: QTSACLSSKQVIPSP*EATGCRSFRATWDD Trigger: GTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGACATGCAGAGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR GCA 90 bp | CTCAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTaGAGGTCATTCAGAGCAACCTGGGATGACAACAGAGGTTTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: LSSKQVIPSPWEATG*RSFRATWDDNRGFF Trigger: AAAGAAACCTCTGTTGTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CCA 90 bp | GGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATATTaGTGCTGGGAACTGAACCCAGATCCTCTGCAAATGCTCTTAAGT | + |
|
Preference number: 1 (lower is better) Translates to: GSLGTGVTDSFEPPY*CWELNPDPLQMLLS Trigger: ACTTAAGAGCATTTGCAGAGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR TCA 90 bp | GAGTATAGTTTCTTTATTCATATACTAAGTGGAGAGTGGGCCAGATaGCTTCCCTGTTGTCTTCCATATTGCTGGGGCCCAGGGGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: EYSFFIHILSGEWAR*LPCCLPYCWGPGAT Trigger: TGTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCACTCTCCACTTAGTATATGAATAAAGAAACTATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| 3UTR CCA 90 bp | GTGAGTGGCTGCATGTATGTATGTATGTATGTATACATGTATGCCTaGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCTCTTGGCACT | + |
|
Preference number: 1 (lower is better) Translates to: VSGCMYVCMYVYMYA*YLRKPEEGVGSLGT Trigger: AGTGCCAAGAGATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATACATACATACATACATGCAGCCACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGCCAGATGACTTCCCTGTTGTCTTCCATATTGCTGGGGCCCAGGGGCAACGGTATGCGAGGCTTGTaGGAGGAGGCAGGAGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: VGQMTSLLSSILLGPRGNGMRGL*EEAGAL Trigger: TAGAGCTCCTGCCTCCTCCCACAAGCCTCGCATACC...GTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCTGTATGCCTGGTACCTaGGGAAGCCAGAAGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQFQASDPKSLGSYRVQVCMPGT*GSQKRE Trigger: CTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACA...GACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACCTGGGATGACATTTGAGCCACCATATTaGTGCTGGGAACTGAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: QVPGKLQGAGHSEQPGMTFEPPY*CWELNP Trigger: TGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAA...TGTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CAA 90 bp | GTAAGCTCCGTGGGTCAGTTTCCACTTGCCTGCAGAGTTCAGGACTaGTCAGAGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: VSSVGQFPLACRVQD*SEVNTESNAVDKTL Trigger: CAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTCTGACAAGTCCTGAACTCTGCAGGCAAGTGGAAACTGACCCACGGAGCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCGTATGTATACATGTATaGCTGGTACCTGAGGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSKQVIPSPWEATGCRSFVCIHV*LVPEEA Trigger: GGCTTCCTCAGGTACCAGGCATACATGTATACATAC...GAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CAA 90 bp | CTTTATTCATATACTAAGTGGAGAGTGGGCCAGATGACTTCCCTGTaGTCTTCCATATTGCTGGGGCCCAGGGGCAACATCTGTGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LYSYTKWRVGQMTSL*SSILLGPRGNICVH Trigger: GTGAACACAGATGTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCACTCTCCACTTAGTATATGAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGGGAGTTGGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATATTGGTGCTGGGAACTaGACCCAGATCCTCTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KRELDLLALELQTVLSHHIGAGN*TQILCK Trigger: TTTGCAGAGGATCTGGGTTCAGTTCCCAGCACCAAT...ATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCAGCCAGAAGAGGGAGTaGGATCTCTTGGCACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQFQASDPKSLGSYRVQVSQKRE*DLLALE Trigger: CTCCAGTGCCAAGAGATCCAACTCCCTCTTCTGGCT...GACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR TCA 72 bp | CAGTCCAAACCTCTGCATGTCTCAGTTCCAAGCAAGTaGTCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QSKPLHVSVPSK*SQVPGKLQGAG Trigger: ACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGACATGCAGAGGTTTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CCA 72 bp | GCATGTCTCAGTTCCAAGCAAGTGATCCCAAGTCCCTaGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: ACLSSKQVIPSP*EATGCRSFRAT Trigger: GGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR GCA 72 bp | GTAGGAACAGGTAAGCTCCGTGGGTCAGTTTCCACTTaGCTGCAGAGTTCAGGACTTGTCAGAGGTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: VGTGKLRGSVST*LQSSGLVRGQH Trigger: GTGTTGACCTCTGACAAGTCCTGAACTCTGCAGGCAAGTGGAAACTGACCCACGGAGCTTACCTGTTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTAGGGAGTTGGATCTCTaGGCACTGGAGTTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QFQASDPKSLGSYRVQVIRELDL*ALELQT Trigger: TGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCT...AATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTATTAGCTACTGGCGCCCAGCAACCAGCAGGCGTCCTCCAAGATTCTTCTAGGGAGTTGGATCTCTaGGCACTGGAGTTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KVLATGAQQPAGVLQDSSRELDL*ALELQT Trigger: TGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCT...AGAAGAATCTTGGAGGACGCCTGCTGGTTGCTGGGCGCCAGTAGCTAATACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR GCA 72 bp | GGTCACATGCAATTGAGGTTCCCCAGTCCAAACCTCTaGATGTCTCAGTTCCAAGCAAGTGATCCCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GHMQLRFPSPNL*MSQFQASDPKS Trigger: GGACTTGGGATCACTTGCTTGGAACTGAGACATGCAGAGGTTTGGACTGGGGAACCTCAATTGCATGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CCA 72 bp | GGCACTGGAGTTACAGACAGTTTTGAGCCACCATATTaGTGCTGGGAACTGAACCCAGATCCTCTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: GTGVTDSFEPPY*CWELNPDPLQM Trigger: CATTTGCAGAGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR GCA 72 bp | ACTGGAGTTACAGACAGTTTTGAGCCACCATATTGGTaGTGGGAACTGAACCCAGATCCTCTGCAAATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGVTDSFEPPYW*WELNPDPLQML Trigger: GAGCATTTGCAGAGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAACTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CCA 72 bp | AGGACTTGTCAGAGGTCAACACAGAGTCAAATGCTGTaGATAAGACCTTGCAGATTGCTTGGGCTTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RTCQRSTQSQML*IRPCRLLGLAP Trigger: TGGAGCAAGCCCAAGCAATCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTCTGACAAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| 3UTR CCA 72 bp | GGAGTTACAGACAGTTTTGAGCCACCATATTGGTGCTaGGAACTGAACCCAGATCCTCTGCAAATGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GVTDSFEPPYWC*ELNPDPLQMLL Trigger: TAAGAGCATTTGCAGAGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR GCA 72 bp | TGGCTGCATGTATGTATGTATGTATGTATACATGTATaGCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WLHVCMYVCIHV*LVPEEARRGSW Trigger: CCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATACATACATACATACATGCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CCA 72 bp | TGCATGTATGTATGTATGTATGTATACATGTATGCCTaGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: CMYVCMYVYMYA*YLRKPEEGVGS Trigger: AGATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATACATACATACATACATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCGAGGCCTGATTTCACTGCTCTaGGAACTGCTGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRGNICVHLEPSEGMRGLISLL*ELLLLC Trigger: ACACAGCAGCAGCAGTTCCCAGAGCAGTGAAATCAG...GCCTCGCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCCTGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| 3UTR CAA 72 bp | TGTGTTCACCTGGAGCCATCTGAGGGTATGCGAGGCTaGTGGGAGGAGGCAGGAGCTCTAGCAAGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHLEPSEGMRG*WEEAGALASTD Trigger: GTCTGTGCTTGCTAGAGCTCCTGCCTCCTCCCACAAGCCTCGCATACCCTCAGATGGCTCCAGGTGAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGGCCCAGGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCAACACACCATCCGGATaGTTAGATACAGGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWGPGATSVFTWSHLRVCNTPSG*LDTGHA Trigger: GGCATGCCCTGTATCTAATCATCCGGATGGTGTGTT...GCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCCTGGGCCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCGAGGCTTGTGGGTTGCATCTGTGGTCTTaGGTGCCAGCAAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GATSVFTWSHLRVCEACGLHLWS*VPASFS Trigger: GGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA...CCCACAAGCCTCGCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGGCCCAGGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCCACATGTGTCTAAATTaGTGTTACTCTGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CWGPGATSVFTWSHLRVCHMCLN*CYSVLS Trigger: GCTCAGGACAGAGTAACAGCAATTTAGACACATGTG...GCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCCTGGGCCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACCTGGGATGACACTGATTTCACTGCTCTaGGAACTGCTGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVPGKLQGAGHSEQPGMTLISLL*ELLLLC Trigger: ACACAGCAGCAGCAGTTCCCAGAGCAGTGAAATCAG...TGTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CAA 72 bp | TATACTAAGTGGAGAGTGGGCCAGATGACTTCCCTGTaGTCTTCCATATTGCTGGGGCCCAGGGGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: YTKWRVGQMTSL*SSILLGPRGNI Trigger: GATGTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCACTCTCCACTTAGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR TCA 90 bp | TATTGCTGGGGCCCAGGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTAACTTGCTCTTTGTACTaGTTTCACTGCTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YCWGPGATSVFTWSHLRVTCSLY*FHCSGN Trigger: GTTCCCAGAGCAGTGAAATCAGTACAAAGAGCAAGT...TACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCCTGGGCCCCAGCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCAACACACCATCCGGATaGTTAGATACAGGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKQVIPSPWEATGCRSFNTPSG*LDTGHA Trigger: GGCATGCCCTGTATCTAATCATCCGGATGGTGTGTT...GAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | TATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCTCTTGGCACTGGATTGCATCTGTGGTCTTaGGTGCCAGCAAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YAWYLRKPEEGVGSLGTGLHLWS*VPASFS Trigger: GGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA...TCCAGTGCCAAGAGATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCCTGATTTCACTGCTCTaGGAACTGCTGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKQVIPSPWEATGCRSFLISLL*ELLLLC Trigger: ACACAGCAGCAGCAGTTCCCAGAGCAGTGAAATCAG...GAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGATGACTTCCCTGTTGTCTTCCATATTGCTGGGGCCCAGGGGCAACATCGGCCAGTTTCTCGATaGCACCAACATACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GPDDFPVVFHIAGAQGQHRPVSR*HQHTLF Trigger: GAATAAAGTATGTTGGTGCCATCGAGAAACTGGCCG...ATGTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCAGATGACTTCCCTGTTGTCTTCCATATTGCTGGGGCCCAGGGGCAACCAGAGTCAAATGCTGTaGATAAGACCTTGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VGQMTSLLSSILLGPRGNQSQML*IRPCRL Trigger: CAATCTGCAAGGTCTTATCCACAGCATTTGACTCTG...GTTGCCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCACTTGCTCTTTGTACTaGTTTCACTGCTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQFQASDPKSLGSYRVQVTCSLY*FHCSGN Trigger: GTTCCCAGAGCAGTGAAATCAGTACAAAGAGCAAGT...GACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACAACACACCATCCGGATaGTTAGATACAGGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHNTPSG*LDTGHA Trigger: GGCATGCCCTGTATCTAATCATCCGGATGGTGTGTT...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACTTGCATCTGTGGTCTTaGGTGCCAGCAAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHLHLWS*VPASFS Trigger: GGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGCCCAGGGTTTATTCGTTCTGAGGATGGCCCCTGGGGAAAGCCTTTTCACATGTGTCTAAATTaGTGTTACTCTGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPGFIRSEDGPWGKPFHMCLN*CYSVLS Trigger: GCTCAGGACAGAGTAACAGCAATTTAGACACATGTG...AAAAGGCTTTCCCCAGGGGCCATCCTCAGAACGAATAAACCCTGGGCCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCAGATCCTCTGCAAATGCTCTTAAGTACCAAGCCATCTGTCCAGACCCCATCTGTGGTCTTGAGTaGCAGCAAGCTTTTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPRSSANALKYQAICPDPICGLE*QQAFPS Trigger: GCTGGGAAAAGCTTGCTGGCACTCAAGACCACAGAT...GGGGTCTGGACAGATGGCTTGGTACTTAAGAGCATTTGCAGAGGATCTGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACCTGATTTCACTGCTCTaGGAACTGCTGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHLISLL*ELLLLC Trigger: ACACAGCAGCAGCAGTTCCCAGAGCAGTGAAATCAG...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTACTTGCTCTTTGTACTaGTTTCACTGCTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QFQASDPKSLGSYRVQVITCSLY*FHCSGN Trigger: GTTCCCAGAGCAGTGAAATCAGTACAAAGAGCAAGT...AATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGAGTTGGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATGACAGTGCTGGATCTTaGAAGTCCTCCAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRELDLLALELQTVLSHHDSAGS*KSSKAG Trigger: TCCAGCCTTGGAGGACTTTCAAGATCCAGCACTGTC...ATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACGCTGTTACTCTGTCCTaGGCTTTTAGTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHAVTLS*AFSGVC Trigger: ACAGACTCCACTAAAAGCTCAGGACAGAGTAACAGC...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGTTGGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATAGTCTGTATCGAGGCTaGCGACAGTGCTGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRELDLLALELQTVLSHHSLYRG*RQCWIL Trigger: CAAGATCCAGCACTGTCGCCAGCCTCGATACAGACT...ATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACACTTGCTCTTTGTACTaGTTTCACTGCTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHTCSLY*FHCSGN Trigger: GTTCCCAGAGCAGTGAAATCAGTACAAAGAGCAAGT...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACTTGCCTGCAGAGTTCAGGACTTGTCAGAGGTCAACACAGAGTCAAATGAACACACCATCCGGATaGTTAGATACAGGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FHLPAEFRTCQRSTQSQMNTPSG*LDTGHA Trigger: GGCATGCCCTGTATCTAATCATCCGGATGGTGTGTT...CATTTGACTCTGTGTTGACCTCTGACAAGTCCTGAACTCTGCAGGCAAGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAAATGCTCTTAAGTACCAAGCCATCTGTCCAGACCCCAAGGCTTCTCTTTAACACACCATCCGGATaGTTAGATACAGGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQMLLSTKPSVQTPRLLFNTPSG*LDTGHA Trigger: GGCATGCCCTGTATCTAATCATCCGGATGGTGTGTT...AAAGAGAAGCCTTGGGGTCTGGACAGATGGCTTGGTACTTAAGAGCATTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGACAGTTTTGAGCCACCATATTGGTGCTGGGAACTGAACCCAGATCCTTTGCATCTGTGGTCTTaGGTGCCAGCAAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTDSFEPPYWCWELNPDPLHLWS*VPASFS Trigger: GGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA...AGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACCGGCCAGTTTCTCGATaGCACCAACATACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PGESLFSAFESRERSRSHRPVSR*HQHTLF Trigger: GAATAAAGTATGTTGGTGCCATCGAGAAACTGGCCG...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACCTGGGATGACAACAGAGGTCAGAGTCAAATGCTGTaGATAAGACCTTGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: WEATGCRSFRATWDDNRGQSQML*IRPCRL Trigger: CAATCTGCAAGGTCTTATCCACAGCATTTGACTCTG...ACCTCTGTTGTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGACAGTTTTGAGCCACCATATTGGTGCTGGGAACTGAACCCAGATCCTGCTGTTACTCTGTCCTaGGCTTTTAGTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTDSFEPPYWCWELNPDPAVTLS*AFSGVC Trigger: ACAGACTCCACTAAAAGCTCAGGACAGAGTAACAGC...AGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTTGTCAGAGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTTGCAGATTGCATCTGTGGTCTTaGGTGCCAGCAAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTCQRSTQSQMLWIRPCRLHLWS*VPASFS Trigger: GGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA...TCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTCTGACAAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGAGTTGGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATCGGCCAGTTTCTCGATaGCACCAACATACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KRELDLLALELQTVLSHHRPVSR*HQHTLF Trigger: GAATAAAGTATGTTGGTGCCATCGAGAAACTGGCCG...ATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | ATTACACCCTCTAATAGTCCACAGCTGCAGATAGATGTAGGAACAGGTAAGCTCGCTGTTACTCTGTCCTaGGCTTTTAGTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITPSNSPQLQIDVGTGKLAVTLS*AFSGVC Trigger: ACAGACTCCACTAAAAGCTCAGGACAGAGTAACAGC...GAGCTTACCTGTTCCTACATCTATCTGCAGCTGTGGACTATTAGAGGGTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATTCATATACTAAGTGGAGAGTGGGCCAGATGACTTCCCTGTTGTCTTCCGCTGTTACTCTGTCCTaGGCTTTTAGTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSYTKWRVGQMTSLLSSAVTLS*AFSGVC Trigger: ACAGACTCCACTAAAAGCTCAGGACAGAGTAACAGC...GGAAGACAACAGGGAAGTCATCTGGCCCACTCTCCACTTAGTATATGAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAAATGCTCTTAAGTACCAAGCCATCTGTCCAGACCCCAAGGCTTCTCTTTCACATGTGTCTAAATTaGTGTTACTCTGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQMLLSTKPSVQTPRLLFHMCLN*CYSVLS Trigger: GCTCAGGACAGAGTAACAGCAATTTAGACACATGTG...AAAGAGAAGCCTTGGGGTCTGGACAGATGGCTTGGTACTTAAGAGCATTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGAGTTGGATCTCTTGGCACTGGAGTTACAGACAGTTTTGAGCCACCATCACATGTGTCTAAATTaGTGTTACTCTGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRELDLLALELQTVLSHHHMCLN*CYSVLS Trigger: GCTCAGGACAGAGTAACAGCAATTTAGACACATGTG...ATGGTGGCTCAAAACTGTCTGTAACTCCAGTGCCAAGAGATCCAACTCCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | GTATGTATACATGTATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCCAGAGTCAAATGCTGTaGATAAGACCTTGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VCIHVCLVPEEARRGSWIQSQML*IRPCRL Trigger: CAATCTGCAAGGTCTTATCCACAGCATTTGACTCTG...GATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGTATGTATACATGTATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTCGGCCAGTTTCTCGATaGCACCAACATACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CMYVYMYAWYLRKPEEGVRPVSR*HQHTLF Trigger: GAATAAAGTATGTTGGTGCCATCGAGAAACTGGCCG...AACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATACATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| 3UTR CAA 72 bp | CAAGGCTTCTCTTTTGTCCAGAAAGCAGGTAATTTATaGGAAGTTGACCTACTGTTAACACCTTTTAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QGFSFVQKAGNL*EVDLLLTPFSI Trigger: TATACTAAAAGGTGTTAACAGTAGGTCAACTTCCAATAAATTACCTGCTTTCTGGACAAAAGAGAAGCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGGGCCAGATGACTTCCCTGTTGTCTTCCATATTGCTGGGGCCCAGGGGATAAGACCTTGCAGATaGCTTGGGCTTGCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESGPDDFPVVFHIAGAQGIRPCR*LGLAPG Trigger: GCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTAT...CCCCTGGGCCCCAGCAATATGGAAGACAACAGGGAAGTCATCTGGCCCACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCAGAGCAACCTGGGATGACACGACAGTGCTGGATCTaGAAAGTCCTCCAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVPGKLQGAGHSEQPGMTRQCWI*KVLQGW Trigger: CCAGCCTTGGAGGACTTTCAAGATCCAGCACTGTCG...TGTCATCCCAGGTTGCTCTGAATGACCTGCACCCTGTAGCTTCCCAGGGACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCGAGGCTCTGGAATCCACAGACTaGCTCTTTGTACTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPGATSVFTWSHLRVCEALESTD*LFVLIS Trigger: TGAAATCAGTACAAAGAGCAAGTCTGTGGATTCCAG...AGCCTCGCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCAACATCTGTGTTCACCTGGAGCCATCTGAGGGTATGCGAGGCTTGTGGGGCACATGTGTCTAAATaGCTGTTACTCTGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GATSVFTWSHLRVCEACGAHVSK*LLLCPE Trigger: CTCAGGACAGAGTAACAGCAATTTAGACACATGTGC...CCCACAAGCCTCGCATACCCTCAGATGGCTCCAGGTGAACACAGATGTTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCATAAGACCTTGCAGATaGCTTGGGCTTGCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKQVIPSPWEATGCRSFIRPCR*LGLAPG Trigger: GCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTAT...GAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAAGCAAGTGATCCCAAGTCCCTGGGAAGCTACAGGGTGCAGGTCATTCCTTGCATCTGTGGTCTaGAGTGCCAGCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKQVIPSPWEATGCRSFLASVV*SASKLF Trigger: GAAAAGCTTGCTGGCACTCAAGACCACAGATGCAAG...GAATGACCTGCACCCTGTAGCTTCCCAGGGACTTGGGATCACTTGCTTGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTATTAGCTACTGGCGCCCAGCAACCAGCAGGCGTCCTCCAAGATTCTTCTCTTGCATCTGTGGTCTaGAGTGCCAGCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KVLATGAQQPAGVLQDSSLASVV*SASKLF Trigger: GAAAAGCTTGCTGGCACTCAAGACCACAGATGCAAG...AGAAGAATCTTGGAGGACGCCTGCTGGTTGCTGGGCGCCAGTAGCTAATACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACCCTTGCATCTGTGGTCTaGAGTGCCAGCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGKAFSQPLKAVKDHGLTLASVV*SASKLF Trigger: GAAAAGCTTGCTGGCACTCAAGACCACAGATGCAAG...GGTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR CAA 90 bp | TATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCTCTTGGCACTGGAGCACATGTGTCTAAATaGCTGTTACTCTGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YAWYLRKPEEGVGSLGTGAHVSK*LLLCPE Trigger: CTCAGGACAGAGTAACAGCAATTTAGACACATGTGC...TCCAGTGCCAAGAGATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | GTATGTATACATGTATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCATAAGACCTTGCAGATaGCTTGGGCTTGCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCIHVCLVPEEARRGSWIIRPCR*LGLAPG Trigger: GCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTAT...GATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS TCA 90 bp | ATCCGGATGATTAGATACAGGGCATGCCTATGCAGAACACCATGCTaGTCCGTGGTCGAGACTTTTATGCCGTACTTAGAAACGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRMIRYRACLCRTPC*SVVETFMPYLETPR Trigger: TCTGGGCGTTTCTAAGTACGGCATAAAAGTCTCGACCACGGATCAGCATGGTGTTCTGCATAGGCATGCCCTGTATCTAATCATCCGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000076260.12 ENSMUST00000172834.2 ENSMUST00000173688.2 ENSMUST00000173729.8 ENSMUST00000232072.2 |
||
| CDS GCA 90 bp | ACTTGTCAGAGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTTaGAGATTGCTTGGGCTTGCTCCAGGCTGTTACACTGGTAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: TCQRSTQSQMLWIRP*RLLGLAPGCYTGKP Trigger: GGGTTTACCAGTGTAACAGCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTCTGACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 ENSMUST00000232072.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACGCACATGTGTCTAAATaGCTGTTACTCTGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGESLFSAFESRERSRSHAHVSK*LLLCPE Trigger: CTCAGGACAGAGTAACAGCAATTTAGACACATGTGC...GTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAAAGCCTTTTCTCAGCCTTTGAAAGCCGTGAAAGATCACGGTCTCACCCTGGAATCCACAGACTaGCTCTTTGTACTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGKAFSQPLKAVKDHGLTLESTD*LFVLIS Trigger: TGAAATCAGTACAAAGAGCAAGTCTGTGGATTCCAG...GGTGAGACCGTGATCTTTCACGGCTTTCAAAGGCTGAGAAAAGGCTTTCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172834.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAGAGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTTGCAGATTGCTTCTTGCATCTGTGGTCTaGAGTGCCAGCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CQRSTQSQMLWIRPCRLLLASVV*SASKLF Trigger: GAAAAGCTTGCTGGCACTCAAGACCACAGATGCAAG...AAGCAATCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173688.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTCATATACTAAGTGGAGAGTGGGCCAGATGACTTCCCTGTTGTCTTCCCTTGCATCTGTGGTCTaGAGTGCCAGCAAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYSYTKWRVGQMTSLLSSLASVV*SASKLF Trigger: GAAAAGCTTGCTGGCACTCAAGACCACAGATGCAAG...GGAAGACAACAGGGAAGTCATCTGGCCCACTCTCCACTTAGTATATGAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232072.2 |
||
| CDS-3UTR CAA 90 bp | GTATGTATACATGTATGCCTGGTACCTGAGGAAGCCAGAAGAGGGAGTTGGATCCTGGAATCCACAGACTaGCTCTTTGTACTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCIHVCLVPEEARRGSWILESTD*LFVLIS Trigger: TGAAATCAGTACAAAGAGCAAGTCTGTGGATTCCAG...GATCCAACTCCCTCTTCTGGCTTCCTCAGGTACCAGGCATACATGTATACATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | GTTACAGACAGTTTTGAGCCACCATATTGGTGCTGGGAACTGAACCCAGATCCTCTGGAATCCACAGACTaGCTCTTTGTACTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTDSFEPPYWCWELNPDPLESTD*LFVLIS Trigger: TGAAATCAGTACAAAGAGCAAGTCTGTGGATTCCAG...AGGATCTGGGTTCAGTTCCCAGCACCAATATGGTGGCTCAAAACTGTCTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS-3UTR CAA 90 bp | ATTACACCCTCTAATAGTCCACAGCTGCAGATAGATGTAGGAACAGGTAAGCTCGCACATGTGTCTAAATaGCTGTTACTCTGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ITPSNSPQLQIDVGTGKLAHVSK*LLLCPE Trigger: CTCAGGACAGAGTAACAGCAATTTAGACACATGTGC...GAGCTTACCTGTTCCTACATCTATCTGCAGCTGTGGACTATTAGAGGGTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 |
||
| CDS CAA 72 bp | TGGAGTCTGTATCGAGGCTGGCGACAGTGCTGGATCTaGAAAGTCCTCCAAGGCTGGAATCCACAGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSLYRGWRQCWI*KVLQGWNPQTC Trigger: GCAAGTCTGTGGATTCCAGCCTTGGAGGACTTTCAAGATCCAGCACTGTCGCCAGCCTCGATACAGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076260.12 ENSMUST00000172834.2 ENSMUST00000173729.8 ENSMUST00000232072.2 |
||
| CDS CAA 72 bp | GAGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTaGCAGATTGCTTGGGCTTGCTCCAGGCTGTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: EVNTESNAVDKT*QIAWACSRLLH Trigger: GTGTAACAGCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 ENSMUST00000232072.2 |
||
| CDS GCA 72 bp | AGGTCAACACAGAGTCAAATGCTGTGGATAAGACCTTaGAGATTGCTTGGGCTTGCTCCAGGCTGTTACACT | + |
|
Preference number: 6 (lower is better) Translates to: RSTQSQMLWIRP*RLLGLAPGCYT Trigger: AGTGTAACAGCCTGGAGCAAGCCCAAGCAATCTGCAAGGTCTTATCCACAGCATTTGACTCTGTGTTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076260.12 ENSMUST00000173729.8 ENSMUST00000232072.2 |
||