Pregenerated sensors for ITGB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025809Ensembl transcript IDs: ENSMUST00000090006.12, ENSMUST00000124826.2, ENSMUST00000149116.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTaGGGGGCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: HVGKACAGALWVNCC*GALPRPCSPASSRT Trigger: TGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGCCCCCCAGCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
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| 3UTR GCA 90 bp | CAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTCAGATaGTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: QPWPPCEAENQSWFR*CDAAQLCPALALAV Trigger: CACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR GCA 90 bp | GCGTCCATGTCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTaGCTCCCAACACGCCCCTCATTGCACCTGCAGGCTCCACACTCA | + |
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Preference number: 1 (lower is better) Translates to: ASMSSLFTSSVLHSQ*LPTRPSLHLQAPHS Trigger: TGAGTGTGGAGCCTGCAGGTGCAATGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATGGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR GCA 90 bp | CTTTCCTGCAGTAAGCGTCCATGTCTTCACTGTTCACTTCATCTGTaGTACATTCACAGTGCCTCCCAACACGCCCCTCATTGCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSCSKRPCLHCSLHL*YIHSASQHAPHCTC Trigger: GCAGGTGCAATGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATGGACGCTTACTGCAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 90 bp | ACCTGCAGGCTCCACACTCAAATGTCCCATTTCCCTCATGGCACTTaGGACTGGCTGGGATGCCATGGCTTTGACAATTGCACTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: TCRLHTQMSHFPHGT*DWLGCHGFDNCTYR Trigger: TCTGTAAGTGCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTTGAGTGTGGAGCCTGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 90 bp | ATGGACCAGTGTCCAAAGAACAGTCACATGCACTGCCAGTGTAATTaGGATAGCATTCACAAACACGACACCTGCACACGCCATTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: MDQCPKNSHMHCQCN*DSIHKHDTCTRHCL Trigger: GAGGCAATGGCGTGTGCAGGTGTCGTGTTTGTGAATGCTATCCCAATTACACTGGCAGTGCATGTGACTGTTCTTTGGACACTGGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 90 bp | TCCACACTCAAATGTCCCATTTCCCTCATGGCACTTGGGACTGGCTaGGATGCCATGGCTTTGACAATTGCACTTACAGATGAACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: STLKCPISLMALGTG*DAMALTIALTDELK Trigger: CTTCAGTTCATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTTGAGTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR TCA 90 bp | CAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTaGTTCTGTATAACCAGCCCTGGCCACCCTGTGAAGCTGAAAATC | + |
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Preference number: 1 (lower is better) Translates to: QQAKQRTKPPARTVL*FCITSPGHPVKLKI Trigger: GATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR GCA 90 bp | TTGACGCTAGACATGGACCAGTGTCCAAAGAACAGTCACATGCACTaGCAGTGTAATTGGGATAGCATTCACAAACACGACACCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: LTLDMDQCPKNSHMH*QCNWDSIHKHDTCT Trigger: TGTGCAGGTGTCGTGTTTGTGAATGCTATCCCAATTACACTGGCAGTGCATGTGACTGTTCTTTGGACACTGGTCCATGTCTAGCGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR GCA 90 bp | CACATTCTCCATTGTTACTGCAGATTTCCGAACTGTTCTCTTTCCTaGAGTAAGCGTCCATGTCTTCACTGTTCACTTCATCTGTGCTAC | + |
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Preference number: 1 (lower is better) Translates to: HILHCYCRFPNCSLS*SKRPCLHCSLHLCY Trigger: GTAGCACAGATGAAGTGAACAGTGAAGACATGGACGCTTACTGCAGGAAAGAGAACAGTTCGGAAATCTGCAGTAACAATGGAGAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR TCA 90 bp | TCAAAGCCACCTTCTGGAGAATCCAAGTTTCCAGATATGCGTTGCTaGCCAACAAGTTCATTGAAAAACTCTCCTCTGTCAGTAAGACTA | + |
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Preference number: 1 (lower is better) Translates to: SKPPSGESKFPDMRC*PTSSLKNSPLSVRL Trigger: TAGTCTTACTGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTCAGCAACGCATATCTGGAAACTTGGATTCTCCAGAAGGTGGCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTTTTCTCCACAAATaGGCCAAAGCCAATGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: VMVQMLRRCSALPCIGTSSFLHK*AKANAE Trigger: TTCCGCATTGGCTTTGGCTCATTTGTGGAGAAAACT...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCCATGGCACTTGGGACTaGCTGGGATGCCATGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: KATSKDCSLILYNQPWPPHGTWD*LGCHGF Trigger: AAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATG...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGCCAATGCGGAAGTCTaGAGTAATCCTCCTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: GNSQRAASRLNKEQSHQQANAEV*SNPPHF Trigger: GAAATGAGGAGGATTACTTCAGACTTCCGCATTGGC...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAACTTCTCCCTGCTTTCTACTTTGGTGAGATTGAAGTGGGAGCACTCCTGTGAAACCCAGCATCCGTaGAAAACACCAGCAGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: GNFSLLSTLVRLKWEHSCETQHP*KTPAVV Trigger: CACGACTGCTGGTGTTTTCCACGGATGCTGGGTTTC...ACAGGAGTGCTCCCACTTCAATCTCACCAAAGTAGAAAGCAGGGAGAAGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGTATAACCAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTCTTCCCTCATGGCACTTaGGACTGGCTGGGATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ILYNQPWPPCEAENQSWFFPHGT*DWLGCH Trigger: ATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAA...GAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CAA 90 bp | CCCATTTCCCTCATGGCACTTGGGACTGGCTGGGATGCCATGGCTTaGACAATTGCACTTACAGATGAACTGAAGAACGACCTCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: PISLMALGTGWDAMA*TIALTDELKNDLYF Trigger: GAAGTAGAGGTCGTTCTTCAGTTCATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTGCCTCCCAACACGCCATCTCCAGCAAAGTaGAACCCAGCATCCGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HVFTVHFICATFTVPPNTPSPAK*NPASVE Trigger: TTCCACGGATGCTGGGTTTCACTTTGCTGGAGATGG...CGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTTTCCACATACATCACTaGGAATTCCCAGAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RAASRLNKEQSHQQGLFFFHIHH*EFPEGS Trigger: GCTGCCCTCTGGGAATTCCCAGTGATGTATGTGGAA...AAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTCCAGATATGCGTTGCTaGCCAACAAGTTCATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: FPEGSQQAKQRTKPPARTPDMRC*PTSSLK Trigger: TTTCAATGAACTTGTTGGTCAGCAACGCATATCTGG...AGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGGCTCCACACTCAAATGTCCCATTTCCCTCATGGCACTTGGGACTGGCTGCTATTTTCCAGAATaGCTTCTGAAGAAAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PAGSTLKCPISLMALGTGCYFPE*LLKKES Trigger: ACTCTCTTTCTTCAGAAGTCATTCTGGAAAATAGCA...GCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTTGAGTGTGGAGCCTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAATCAGTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGCCAAGTTTCCAGATATaGGTTGCTGACCAACAAGTT | + |
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Preference number: 2 (lower is better) Translates to: ENQSWFRCCDAAQLCPALPSFQI*VADQQV Trigger: AACTTGTTGGTCAGCAACGCATATCTGGAAACTTGG...CAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTGCCTCCCAACACGGGGATGCCATGGCTTTaGCAATTGCACTTACAGATG | + |
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Preference number: 2 (lower is better) Translates to: HVFTVHFICATFTVPPNTGMPWL*QLHLQM Trigger: CATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCC...CGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCATCAAAGCCACCTTCTaGAGAATCCAAGTTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KATSKDCSLILYNQPWPPIKATF*RIQVSR Trigger: TCTGGAAACTTGGATTCTCCAGAAGGTGGCTTTGAT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTGCCTCCCAACACGAATCTAGTGAGAGCTTaGTTCCAATGGTCCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: HVFTVHFICATFTVPPNTNLVRA*FQWSRR Trigger: CCTTCTGGACCATTGGAATCAAGCTCTCACTAGATT...CGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | ACATACATCACTGGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAGCAAGGACTGTTCTTTaGTTCTGTATAACCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TYITGNSQRAASRLNKEQARTVL*FCITSP Trigger: AGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGC...TTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCCAGTGATGTATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAACTTCTCCCTGCTTTCTACTTTGGTGAGATTGAAGTGGGAGCACTCCTGTTTCCAGAATGACTTCTaGAGAAAGAGAGTTGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: GNFSLLSTLVRLKWEHSCFQNDF*RKRVVG Trigger: GCCTACAACTCTCTTTCTTCAGAAGTCATTCTGGAA...ACAGGAGTGCTCCCACTTCAATCTCACCAAAGTAGAAAGCAGGGAGAAGTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTAAGCGTCCATGTCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTTTCCACATACATCACTaGGAATTCCCAGAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSKRPCLHCSLHLCYIHSFHIHH*EFPEGS Trigger: GCTGCCCTCTGGGAATTCCCAGTGATGTATGTGGAA...ACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATGGACGCTTACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR GCA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCACCTGCACACGCCATTaGCTCCACAAATTAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: HIVHFPNLHVNKTLATEPTCTRH*LHKLSH Trigger: ATGGCTTAATTTGTGGAGGCAATGGCGTGTGCAGGT...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCAATCTAGTGAGAGCTTaGTTCCAATGGTCCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: HIVHFPNLHVNKTLATEPNLVRA*FQWSRR Trigger: CCTTCTGGACCATTGGAATCAAGCTCTCACTAGATT...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 ENSMUST00000149116.2 |
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| 3UTR CAA 90 bp | TGCATCAAAGCCACCTTCTGGAGAATCCAAGTTTCCAGATATGCGTaGCTGACCAACAAGTTCATTGAAAAACTCTCCTCTGTCAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: CIKATFWRIQVSRYA*LTNKFIEKLSSVSK Trigger: CTTACTGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTCAGCAACGCATATCTGGAAACTTGGATTCTCCAGAAGGTGGCTTTGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCGACCAACAAGTTCATTaGAAAACTCTCCTCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: HIVHFPNLHVNKTLATEPDQQVH*KTLLCQ Trigger: CTGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTC...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCTCCTGTCCCATTCACCCCATTCTTGCAATAGGATTTGTAATTTATTGTACATTATTTTCCAGGTaGCATTGTCCATCATTGGGT | + |
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Preference number: 2 (lower is better) Translates to: IFSCPIHPILAIGFVIYCTLFSR*HCPSLG Trigger: ACCCAATGATGGACAATGTCACCTGGAAAATAATGT...ACAATAAATTACAAATCCTATTGCAAGAATGGGGTGAATGGGACAGGAGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 72 bp | AAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTaGGGGGCCCTGCCCAGGCCCTGTAGTCCTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: KACAGALWVNCC*GALPRPCSPAS Trigger: GCTTGCAGGACTACAGGGCCTGGGCAGGGCCCCCCAGCAACAATTCACCCACAGTGCACCTGCACATGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
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| 3UTR CCA 72 bp | CAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATaGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QPWPPCEAENQS*FRCCDAAQLCP Trigger: AGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCCCAACACGCCCCTCATaGCACCTGCAGGCTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: KATSKDCSLILYNQPWPPPTRPS*HLQAPH Trigger: GTGTGGAGCCTGCAGGTGCAATGAGGGGCGTGTTGG...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR GCA 72 bp | CCACCCTGTGAAGCTGAAAATCAGTCATGGTTCAGATaGTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PPCEAENQSWFR*CDAAQLCPALA Trigger: TGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTCAGCTTCACAGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR CCA 72 bp | TCCTTGCAATGGGTCACAGGATCGACCTGCACCGGCTaGGGCAACTTCTCCCTGCTTTCTACTTTGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SLQWVTGSTCTG*GNFSLLSTLVR Trigger: TCTCACCAAAGTAGAAAGCAGGGAGAAGTTGCCCCAGCCGGTGCAGGTCGATCCTGTGACCCATTGCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR GCA 72 bp | CCCTGTGAAGCTGAAAATCAGTCATGGTTCAGATGCTaGGACGCTGCTCAGCTCTGCCCTGCATTGGCACTA | + |
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Preference number: 3 (lower is better) Translates to: PCEAENQSWFRC*DAAQLCPALAL Trigger: TAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTCAGCTTCACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR GCA 72 bp | TCTTCACTGTTCACTTCATCTGTGCTACATTCACAGTaGCTCCCAACACGCCCCTCATTGCACCTGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSLFTSSVLHSQ*LPTRPSLHLQA Trigger: AGCCTGCAGGTGCAATGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 72 bp | CTCCACACTCAAATGTCCCATTTCCCTCATGGCACTTaGGACTGGCTGGGATGCCATGGCTTTGACAATTGC | + |
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Preference number: 3 (lower is better) Translates to: LHTQMSHFPHGT*DWLGCHGFDNC Trigger: GCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTTGAGTGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR GCA 72 bp | AGTAAGCGTCCATGTCTTCACTGTTCACTTCATCTGTaGTACATTCACAGTGCCTCCCAACACGCCCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SKRPCLHCSLHL*YIHSASQHAPH Trigger: ATGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATGGACGCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCAGCAAGGACTGTTCTTaGATTCTGTATAACCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KATSKDCSLILYNQPWPPSKDCS*ILYNQP Trigger: GGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATCAGTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGTTAGACCTATCACAGTaGAAGTTATCACACTCGCAG | + |
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Preference number: 3 (lower is better) Translates to: ENQSWFRCCDAAQLCPALLDLSQ*KLSHSQ Trigger: CTGCGAGTGTGATAACTTCAACTGTGATAGGTCTAA...CAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 72 bp | AAATGTCCCATTTCCCTCATGGCACTTGGGACTGGCTaGGATGCCATGGCTTTGACAATTGCACTTACAGAT | + |
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Preference number: 3 (lower is better) Translates to: KCPISLMALGTG*DAMALTIALTD Trigger: ATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR CCA 72 bp | TGTCCAAAGAACAGTCACATGCACTGCCAGTGTAATTaGGATAGCATTCACAAACACGACACCTGCACACGC | + |
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Preference number: 3 (lower is better) Translates to: CPKNSHMHCQCN*DSIHKHDTCTR Trigger: GCGTGTGCAGGTGTCGTGTTTGTGAATGCTATCCCAATTACACTGGCAGTGCATGTGACTGTTCTTTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| 3UTR TCA 72 bp | AAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTaGTTCTGTATAACCAGCCCTGGCCACCCTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQRTKPPARTVL*FCITSPGHPVK Trigger: CTTCACAGGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| 3UTR TCA 72 bp | CAAAACTACCCTACTGTGACTAAGATGCTGCTGCTGTaGGCTTGGTGTTGCAAAATCCGCCTGAGTAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: QNYPTVTKMLLL*AWCCKIRLSRI Trigger: AATCCTACTCAGGCGGATTTTGCAACACCAAGCTCACAGCAGCAGCATCTTAGTCACAGTAGGGTAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124826.2 ENSMUST00000149116.2 |
||
| 3UTR GCA 72 bp | GACATGGACCAGTGTCCAAAGAACAGTCACATGCACTaGCAGTGTAATTGGGATAGCATTCACAAACACGAC | + |
|
Preference number: 3 (lower is better) Translates to: DMDQCPKNSHMH*QCNWDSIHKHD Trigger: GTCGTGTTTGTGAATGCTATCCCAATTACACTGGCAGTGCATGTGACTGTTCTTTGGACACTGGTCCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR CCA 72 bp | AGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTaGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKDCSLILYNQP*PPCEAENQSWF Trigger: GAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| 3UTR CCA 72 bp | TACAATTGGGATGATGTCGGGACCAGTAGGACAGTCTaGAGTCTCCACAACATGCACGATAGCTTCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YNWDDVGTSRTV*SLHNMHDSFIV Trigger: AACAATGAAGCTATCGTGCATGTTGTGGAGACTCCAGACTGTCCTACTGGTCCCGACATCATCCCAATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGTATAACCAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTCCAGACACATTCTCCATaGTTACTGCAGATTTCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: ILYNQPWPPCEAENQSWFQTHSP*LLQISE Trigger: TTCGGAAATCTGCAGTAACAATGGAGAATGTGTCTG...GAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR GCA 72 bp | ACACACACTGTCCACAGACACATTCTCCATTGTTACTaGAGATTTCCGAACTGTTCTCTTTCCTGCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: THTVHRHILHCY*RFPNCSLSCSK Trigger: CTTACTGCAGGAAAGAGAACAGTTCGGAAATCTGCAGTAACAATGGAGAATGTGTCTGTGGACAGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR TCA 72 bp | CCTTCTGGAGAATCCAAGTTTCCAGATATGCGTTGCTaGCCAACAAGTTCATTGAAAAACTCTCCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSGESKFPDMRC*PTSSLKNSPLS Trigger: TGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTCAGCAACGCATATCTGGAAACTTGGATTCTCCAGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR GCA 72 bp | CATTGTTACTGCAGATTTCCGAACTGTTCTCTTTCCTaGAGTAAGCGTCCATGTCTTCACTGTTCACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HCYCRFPNCSLS*SKRPCLHCSLH Trigger: ATGAAGTGAACAGTGAAGACATGGACGCTTACTGCAGGAAAGAGAACAGTTCGGAAATCTGCAGTAACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGGTGACATTGTCCATCATTGGGTAAAACAATACCACCAAGTTTCCCATGTTTCCAGATATGCGTaGCTGACCAACAAGTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FPGDIVHHWVKQYHQVSHVSRYA*LTNKFI Trigger: AATGAACTTGTTGGTCAGCAACGCATATCTGGAAAC...ATGGGAAACTTGGTGGTATTGTTTTACCCAATGATGGACAATGTCACCTGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACGCCATTGCCTCCACAAATTAAGCCATTAGACCTATCACAGTTGAAGTTATCTCCAATAGAAATGTaGGAACACTTTCGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HTPLPPQIKPLDLSQLKLSPIEM*EHFRPF Trigger: AAATGGACGAAAGTGTTCCAACATTTCTATTGGAGA...TAACTTCAACTGTGATAGGTCTAATGGCTTAATTTGTGGAGGCAATGGCGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCTCCTGTCCCATTCACCCCATTCTTGCAATAGGATTTGTAATTTATTGTTGGGCTGGTGCAGTTTaGTTCACTTGTACAAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFSCPIHPILAIGFVIYCWAGAV*FTCTRI Trigger: AATCCTTGTACAAGTGAACAAAACTGCACCAGCCCA...ACAATAAATTACAAATCCTATTGCAAGAATGGGGTGAATGGGACAGGAGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCACCATCTCCAGCAAAGTaGAACCCAGCATCCGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPALALAVSPSPAK*NPASVE Trigger: TTCCACGGATGCTGGGTTTCACTTTGCTGGAGATGG...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCGTCACAGGATCGACCTaGACCGGCTGGGGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KATSKDCSLILYNQPWPPVTGST*TGWGNF Trigger: GAAGTTGCCCCAGCCGGTGCAGGTCGATCCTGTGAC...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCACCAGTAGGACAGTCTaGAGTCTCCACAACATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMVQMLRRCSALPCIGTSTSRTV*SLHNMH Trigger: GTGCATGTTGTGGAGACTCCAGACTGTCCTACTGGT...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCACTGAGTAATGTCTTCTaGCCGGAGCTTCTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPALALAVSLSNVF*PELLCH Trigger: ATGGCAGAGAAGCTCCGGCCAGAAGACATTACTCAG...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTGCATGGCACTTGGGACTaGCTGGGATGCCATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EQACRKGMCRCTVGELLLHGTWD*LGCHGF Trigger: AAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATG...CAGCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATGCTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| 3UTR CAA 72 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATaGGCACTAGCAGTGTCATTCAATCTAGTGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPA*ALAVSFNLVRA Trigger: AGCTCTCACTAGATTGAATGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCGACCAACAAGTTCATTaGAAAACTCTCCTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMVQMLRRCSALPCIGTSDQQVH*KTLLCQ Trigger: CTGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTC...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCCCAAGTTTCCAGATATaGGTTGCTGACCAACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VMVQMLRRCSALPCIGTSPSFQI*VADQQV Trigger: AACTTGTTGGTCAGCAACGCATATCTGGAAACTTGG...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTGTGTTGTGGTTGGATCTaGGTAATGTCTTCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EQACRKGMCRCTVGELLLCCGWI*VMSSGR Trigger: CCGGCCAGAAGACATTACTCAGATCCAACCACAACA...CAGCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATGCTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCACCAGATATGCGTTGCTaGCCAACAAGTTCATTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPALALAVSPDMRC*PTSSLK Trigger: TTTCAATGAACTTGTTGGTCAGCAACGCATATCTGG...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCACATTATTTTCCAGGTaGCATTGTCCATCATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VMVQMLRRCSALPCIGTSTLFSR*HCPSLG Trigger: ACCCAATGATGGACAATGTCACCTGGAAAATAATGT...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTTTCCAGAATGACTTCTaGAGAAAGAGAGTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPRPCSPASSRTAYSICFQNDF*RKRVVG Trigger: GCCTACAACTCTCTTTCTTCAGAAGTCATTCTGGAA...ACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAACCCACAATTTGGCCCTaGTTGTATACATTCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNSQRAASRLNKEQSHQQPTIWP*LYTFSA Trigger: TGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGG...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATTGGCCGGAGCTTCTCTaGCATCCCTTTGCTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: AASRLNKEQSHQQGLFFDWPELL*HPFAAI Trigger: AATCGCAGCAAAGGGATGGCAGAGAAGCTCCGGCCA...ATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCAAACTGTTCTCTTTCCTaGAGTAAGCGTCCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPALALAVSNCSLS*SKRPCL Trigger: AAGACATGGACGCTTACTGCAGGAAAGAGAACAGTT...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATGCACTTGGGACTGGCTaGGATGCCATGGCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AASRLNKEQSHQQGLFFDALGTG*DAMALT Trigger: TGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGC...ATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATTTCCCTCATGGCACTTaGGACTGGCTGGGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AASRLNKEQSHQQGLFFDFPHGT*DWLGCH Trigger: ATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAA...ATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTCACTGCCAGTGTAATTaGGATAGCATTCACAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALPRPCSPASSRTAYSICHCQCN*DSIHKH Trigger: GTGTTTGTGAATGCTATCCCAATTACACTGGCAGTG...ACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| 3UTR CAA 72 bp | TGGGGCAACTTCTCCCTGCTTTCTACTTTGGTGAGATaGAAGTGGGAGCACTCCTGTGCACACGTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGNFSLLSTLVR*KWEHSCAHVSF Trigger: GAAAGACACGTGTGCACAGGAGTGCTCCCACTTCAATCTCACCAAAGTAGAAAGCAGGGAGAAGTTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCTTTTTCTTTATAGTTTaGGAGCCTCTGGGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMVQMLRRCSALPCIGTSFFFIV*EPLGFS Trigger: AGAGAATCCCAGAGGCTCTCAAACTATAAAGAAAAA...GCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAAGTTTTCTCCACAAATaGGCCAAAGCCAATGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GNSQRAASRLNKEQSHQQSFLHK*AKANAE Trigger: TTCCGCATTGGCTTTGGCTCATTTGTGGAGAAAACT...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAGTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGACACCACCCACAATTTaGCCCTGCTTGTATACATTC | + |
|
Preference number: 4 (lower is better) Translates to: ENQSWFRCCDAAQLCPALTPPTI*PCLYTF Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGT...CAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTGAACAGTCACATGCACTaGCAGTGTAATTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQACRKGMCRCTVGELLLNSHMH*QCNWDS Trigger: GCTATCCCAATTACACTGGCAGTGCATGTGACTGTT...CAGCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATGCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCACACCACCCACAATTTaGCCCTGCTTGTATACATTC | + |
|
Preference number: 4 (lower is better) Translates to: KATSKDCSLILYNQPWPPTPPTI*PCLYTF Trigger: GAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGTATAACCAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTCGCCAATGCGGAAGTCTaGAGTAATCCTCCTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILYNQPWPPCEAENQSWFANAEV*SNPPHF Trigger: GAAATGAGGAGGATTACTTCAGACTTCCGCATTGGC...GAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | ATTCTGTATAACCAGCCCTGGCCACCCTGTGAAGCTGAAAATCAGTCATGGTTCGGGATGCCATGGCTTTaGCAATTGCACTTACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILYNQPWPPCEAENQSWFGMPWL*QLHLQM Trigger: CATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCC...GAACCATGACTGATTTTCAGCTTCACAGGGTGGCCAGGGCTGGTTATACAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | ATTGTGACTAGTTCGAGACAGAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACCCACAATTTGGCCCTaGTTGTATACATTCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVTSSRQSKHVGKACAGAPTIWP*LYTFSA Trigger: TGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGG...TGCACCTGCACATGCCTTTCCTACATGCTTGCTCTGTCTCGAACTAGTCACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCAGTAGGCATTCCTTCTTaGAAAAATGTCGTATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRCCDAAQLCPALALAVSVGIPS*KNVVFV Trigger: TACAAATACGACATTTTTGCAAGAAGGAATGCCTAC...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCATTCTCTATGTCACTTaGCTGGCAACCCTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KATSKDCSLILYNQPWPPILYVT*LATLLF Trigger: AAAAAGAAGGGTTGCCAGCCAAGTGACATAGAGAAT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTAGAAACCCAGCATCCGTaGAAAACACCAGCAGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLNKEQSHQQGLFFDSVETQHP*KTPAVV Trigger: CACGACTGCTGGTGTTTTCCACGGATGCTGGGTTTC...TACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCACCAGTAGGACAGTCTaGAGTCTCCACAACATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIVHFPNLHVNKTLATEPTSRTV*SLHNMH Trigger: GTGCATGTTGTGGAGACTCCAGACTGTCCTACTGGT...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000149116.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGTCACAAGTTGGCCCTTaGAACTTGGGATCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQSQVGP*NLGSVH Trigger: GTGCACAGATCCCAAGTTTCAAGGGCCAACTTGTGA...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | ATTGTGACTAGTTCGAGACAGAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCAATCAAAGCCACCTTCTaGAGAATCCAAGTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVTSSRQSKHVGKACAGAIKATF*RIQVSR Trigger: TCTGGAAACTTGGATTCTCCAGAAGGTGGCTTTGAT...TGCACCTGCACATGCCTTTCCTACATGCTTGCTCTGTCTCGAACTAGTCACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGACCTGCACACGCCATTaGCTCCACAAATTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQTCTRH*LHKLSH Trigger: ATGGCTTAATTTGTGGAGGCAATGGCGTGTGCAGGT...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCGGAGTCTCCACAACATaGACGATAGCTTCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HIVHFPNLHVNKTLATEPGVSTT*TIASLL Trigger: CAACAATGAAGCTATCGTGCATGTTGTGGAGACTCC...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000149116.2 |
||
| CDS-3UTR GCA 90 bp | ATTATACATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGTGCTACATTCACAGTaGCTCCCAACACGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIHIVHFPNLHVNKTLATVLHSQ*LPTRPS Trigger: TGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCAC...TGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATGTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATGTTCACTTCATCTGTaGTACATTCACAGTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLNKEQSHQQGLFFDSVCSLHL*YIHSAS Trigger: GGAGGCACTGTGAATGTAGCACAGATGAAGTGAACA...TACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGCAAAGAACAGTCACATaGACTGCCAGTGTAATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQQRTVT*TASVIG Trigger: CCCAATTACACTGGCAGTGCATGTGACTGTTCTTTG...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGGGAGTCTCCACAACATaGACGATAGCTTCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQGVSTT*TIASLL Trigger: CAACAATGAAGCTATCGTGCATGTTGTGGAGACTCC...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR TCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGTGCTATTTTCCAGAATaGCTTCTGAAGAAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQCYFPE*LLKKES Trigger: ACTCTCTTTCTTCAGAAGTCATTCTGGAAAATAGCA...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR GCA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGATTCTCCATTGTTACTaGAGATTTCCGAACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQILHCY*RFPNCS Trigger: AGAACAGTTCGGAAATCTGCAGTAACAATGGAGAAT...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACCTCTCAGAATTTTTCCAATGGACTTGAACATCAACTGTGTCAATTTTCTATGTCACTTGGCTaGCAACCCTTCTTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTSQNFSNGLEHQLCQFSMSLG*QPFFFK Trigger: TTTGAAAAAGAAGGGTTGCCAGCCAAGTGACATAGA...AAATTGACACAGTTGATGTTCAAGTCCATTGGAAAAATTCTGAGAGGTGGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACCTCTCAGAATTTTTCCAATGGACTTGAACATCAACTGTGTCAATTTATTTTTGTAGCTAAATaGGCTGGTGCAGTTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTSQNFSNGLEHQLCQFIFVAK*AGAVLF Trigger: GAACAAAACTGCACCAGCCCATTTAGCTACAAAAAT...AAATTGACACAGTTGATGTTCAAGTCCATTGGAAAAATTCTGAGAGGTGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| 3UTR CAA 72 bp | CATTCACCCCATTCTTGCAATAGGATTTGTAATTTATaGTTACTCCGTCTGGCAATTTGCTATTTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSPHSCNRICNL*LLRLAICYFPE Trigger: TTCTGGAAAATAGCAAATTGCCAGACGGAGTAACAATAAATTACAAATCCTATTGCAAGAATGGGGTGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| 3UTR CAA 72 bp | CTTAGGAATCAAATTCTTCAATTCCTTGTAAACAGGTaGGAACTCTTCAGTAACTGCAAAAATCGTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRNQILQFLVNR*ELFSNCKNRLN Trigger: ATTCAGACGATTTTTGCAGTTACTGAAGAGTTCCAACCTGTTTACAAGGAATTGAAGAATTTGATTCCTAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS-3UTR CAA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAACCAACACGCCCCTCATaGCACCTGCAGGCTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GNSQRAASRLNKEQSHQQPTRPS*HLQAPH Trigger: GTGTGGAGCCTGCAGGTGCAATGAGGGGCGTGTTGG...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GAAAATCAGTCATGGTTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGTTTCCCTCATGGCACTaGGGACTGGCTGGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ENQSWFRCCDAAQLCPALFPSWH*GLAGMP Trigger: TGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAA...CAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAACCATGACTGATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | TTCAGATGCTGCGACGCTGCTCAGCTCTGCCCTGCATTGGCACTAGCAGTGTCACACCTGCACACGCCATaGCCTCCACAAATTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRCCDAAQLCPALALAVSHLHTP*PPQIKP Trigger: TGGCTTAATTTGTGGAGGCAATGGCGTGTGCAGGTG...TGACACTGCTAGTGCCAATGCAGGGCAGAGCTGAGCAGCGTCGCAGCATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGATTCTCTATGTCACTaGGCTGGCAACCCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALPRPCSPASSRTAYSICDSLCH*AGNPSF Trigger: AAAAGAAGGGTTGCCAGCCAAGTGACATAGAGAATC...ACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGTTTCCAGATATGCGTaGCTGACCAACAAGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ALPRPCSPASSRTAYSICVSRYA*LTNKFI Trigger: AATGAACTTGTTGGTCAGCAACGCATATCTGGAAAC...ACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GCCCTGCCCAGGCCCTGTAGTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTACTCCGTCTGGCAATTaGCTATTTTCCAGAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: ALPRPCSPASSRTAYSICTPSGN*LFSRMT Trigger: AGTCATTCTGGAAAATAGCAAATTGCCAGACGGAGT...ACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAATCCCTGCTTTCTACTTaGGTGAGATTGAAGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNSQRAASRLNKEQSHQQSLLST*VRLKWE Trigger: CTCCCACTTCAATCTCACCAAAGTAGAAAGCAGGGA...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS TCA 90 bp | GGTTCTCCTGATCTCAATTTTAGAAGCAGCTGTTGTGGTTGGATCTaGGTAATGTCTTCTGGCCGGAGCTTCTCTGCCATCCCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPDLNFRSSCCGWI*VMSSGRSFSAIPLL Trigger: CAGCAAAGGGATGGCAGAGAAGCTCCGGCCAGAAGACATTACTCAGATCCAACCACAACAGCTGCTTCTAAAATTGAGATCAGGAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCAAGCAGCTGTTGTGGTaGGATCTGAGTAATGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KATSKDCSLILYNQPWPPKQLLW*DLSNVF Trigger: GAAGACATTACTCAGATCCAACCACAACAGCTGCTT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCTGGGCTGGTGCAGTTTaGTTCACTTGTACAAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: QSKHVGKACAGALWVNCCWAGAV*FTCTRI Trigger: AATCCTTGTACAAGTGAACAAAACTGCACCAGCCCA...GCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATGCTTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTTTAGACCTATCACAGTaGAAGTTATCACACTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPEGSQQAKQRTKPPARTLDLSQ*KLSHSQ Trigger: CTGCGAGTGTGATAACTTCAACTGTGATAGGTCTAA...AGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATTCCCAGAGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAACATTCTCCGCAAGATTaGGCATTTGCTTTTAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GNSQRAASRLNKEQSHQQHSPQD*AFAFKH Trigger: ATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATG...TTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCTCTGGGAATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTTTCCTTGTAAACAGGTaGGAACTCTTCAGTAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAASRLNKEQSHQQGLFFFLVNR*ELFSNC Trigger: GCAGTTACTGAAGAGTTCCAACCTGTTTACAAGGAA...AAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | AAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATAACCAGCCCTGGCCACCCATTTTTCTTTATAGTTaGAGAGCCTCTGGGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KATSKDCSLILYNQPWPPIFLYS*RASGIL Trigger: GAGAATCCCAGAGGCTCTCAAACTATAAAGAAAAAT...GGGTGGCCAGGGCTGGTTATACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAAGCATGTAGGAAAGGCATGTGCAGGTGCACTGTGGGTGAATTGTTGCATCCCTTTGCTGCGATaGGTGACATTTTTATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSKHVGKACAGALWVNCCIPLLR*VTFLFF Trigger: GAAAAATAAAAATGTCACCAATCGCAGCAAAGGGAT...GCAACAATTCACCCACAGTGCACCTGCACATGCCTTTCCTACATGCTTGCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | CATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACAGAGCCCTCTACTTTGGTGAGATaGAAGTGGGAGCACTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HIVHFPNLHVNKTLATEPSTLVR*KWEHSC Trigger: ACAGGAGTGCTCCCACTTCAATCTCACCAAAGTAGA...GGGCTCTGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTCATTCTCCGCAAGATTaGGCATTTGCTTTTAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: RAASRLNKEQSHQQGLFFHSPQD*AFAFKH Trigger: ATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATG...AAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGCCAGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTAGTAGGCATTCCTTCTaGCAAAAATGTCGTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RAASRLNKEQSHQQGLFFSRHSF*QKCRIC Trigger: ACAAATACGACATTTTTGCAAGAAGGAATGCCTACT...AAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCTGGCTGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCACCTCTCAGAATTTTTCCAATGGACTTGAACATCAACTGTGTCAATTCAATGTCCTTCTCCTaGCAATGGGTCACAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: SFPPLRIFPMDLNINCVNSMSFS*QWVTGS Trigger: CGATCCTGTGACCCATTGCAAGGAGAAGGACATTGA...ATTGACACAGTTGATGTTCAAGTCCATTGGAAAAATTCTGAGAGGTGGGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | GTCCTGCAAGCAGCAGGACAGCTTACAGTATTTGTGAAAAAGGTAAATGTACAGACAATTTGGCCCTGCTaGTATACATTCTCCGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLQAAGQLTVFVKKVNVQTIWPC*YTFSAR Trigger: TCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGT...CTGTACATTTACCTTTTTCACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCACAGACACATTCTCCATTGTTACTGCAGATTTCCGAACTGTTCTCTTACAATTTGGCCCTGCTaGTATACATTCTCCGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVHRHILHCYCRFPNCSLTIWPC*YTFSAR Trigger: TCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGT...AAGAGAACAGTTCGGAAATCTGCAGTAACAATGGAGAATGTGTCTGTGGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCTAAACAAAGAACAAAGCCACCAGCAAGGACTGTTCTTTGATTCTGTATACACCACCCACAATTaGGCCCTGCTTGTATACATT | + |
|
Preference number: 5 (lower is better) Translates to: SRLNKEQSHQQGLFFDSVYTTHN*ALLVYI Trigger: AATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTA...TACAGAATCAAAGAACAGTCCTTGCTGGTGGCTTTGTTCTTTGTTTAGCCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS CCA 90 bp | CATTCCTTCTTGCAAAAATGTCGTATTTGTACACCACCCACAATTTaGCCCTGCTTGTATACATTCTCCGCAAGATTTGGCATTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSFLQKCRICTPPTI*PCLYTFSARFGICF Trigger: AAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACATTTTTGCAAGAAGGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CCA 90 bp | ACCACCCACAATTTGGCCCTGCTTGTATACATTCTCCGCAAGATTTaGCATTTGCTTTTAAACATCTATTTTTATCTGTTTGGCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: TTHNLALLVYILRKI*HLLLNIYFYLFGQI Trigger: TATTTGGCCAAACAGATAAAAATAGATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACCTCTCAGAATTTTTCCAATGGACTTGAACATCAACTGTGTCAATTTTCTCCAATAGAAATGTaGGAACACTTTCGTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPTSQNFSNGLEHQLCQFSPIEM*EHFRPF Trigger: AAATGGACGAAAGTGTTCCAACATTTCTATTGGAGA...AAATTGACACAGTTGATGTTCAAGTCCATTGGAAAAATTCTGAGAGGTGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS-3UTR CAA 90 bp | ATTATACATATTGTACATTTTCCAAACCTGCATGTGAATAAAACCCTGGCCACACAGACACATTCTCCATaGTTACTGCAGATTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IIHIVHFPNLHVNKTLATQTHSP*LLQISE Trigger: TTCGGAAATCTGCAGTAACAATGGAGAATGTGTCTG...TGTGGCCAGGGTTTTATTCACATGCAGGTTTGGAAAATGTACAATATGTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CCA 72 bp | AAGCAGCTGTTGTGGTTGGATCTGAGTAATGTCTTCTaGCCGGAGCTTCTCTGCCATCCCTTTGCTGCGATT | + |
|
Preference number: 6 (lower is better) Translates to: KQLLWLDLSNVF*PELLCHPFAAI Trigger: AATCGCAGCAAAGGGATGGCAGAGAAGCTCCGGCCAGAAGACATTACTCAGATCCAACCACAACAGCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS TCA 72 bp | GATCTCAATTTTAGAAGCAGCTGTTGTGGTTGGATCTaGGTAATGTCTTCTGGCCGGAGCTTCTCTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: DLNFRSSCCGWI*VMSSGRSFSAI Trigger: GATGGCAGAGAAGCTCCGGCCAGAAGACATTACTCAGATCCAACCACAACAGCTGCTTCTAAAATTGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CCA 72 bp | TCTGTGGTTCTCCGTATTTGTACACCACCCACAATTTaGCCCTGCTTGTATACATTCTCCGCAAGATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVLRICTPPTI*PCLYTFSARFG Trigger: GCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGAGAACCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS GCA 72 bp | GTTCTCCGTATTTGTACACCACCCACAATTTGGCCCTaGTTGTATACATTCTCCGCAAGATTTGGCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLRICTPPTIWP*LYTFSARFGIC Trigger: GCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS CAA 72 bp | TTCTGTGGTTCTCCGTATTTGTACACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCGCAAGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FCGSPYLYTTHN*ALLVYILRKIW Trigger: CCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGAGAACCACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS CAA 72 bp | CTCCGTATTTGTACACCACCCACAATTTGGCCCTGCTaGTATACATTCTCCGCAAGATTTGGCATTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRICTPPTIWPC*YTFSARFGICF Trigger: AAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
||
| CDS GCA 72 bp | AAATGTCGTATTTGTACACCACCCACAATTTGGCCCTaGTTGTATACATTCTCCGCAAGATTTGGCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KCRICTPPTIWP*LYTFSARFGIC Trigger: GCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CCA 72 bp | TTGCAAAAATGTCGTATTTGTACACCACCCACAATTTaGCCCTGCTTGTATACATTCTCCGCAAGATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQKCRICTPPTI*PCLYTFSARFG Trigger: GCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACATTTTTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CAA 72 bp | TGTCGTATTTGTACACCACCCACAATTTGGCCCTGCTaGTATACATTCTCCGCAAGATTTGGCATTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRICTPPTIWPC*YTFSARFGICF Trigger: AAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
||
| CDS CAA 72 bp | CTTGCAAAAATGTCGTATTTGTACACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCGCAAGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAKMSYLYTTHN*ALLVYILRKIW Trigger: CCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACATTTTTGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
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| CDS CAA 90 bp | GCATTCCTTCTTGCAAAAATGTCGTATTTGTACACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCGCAAGATTTGGCATTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AFLLAKMSYLYTTHN*ALLVYILRKIWHLL Trigger: AAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGACATTTTTGCAAGAAGGAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
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| CDS CAA 90 bp | AATGTAAACTTCTGTGGTTCTCCGTATTTGTACACCACCCACAATTaGGCCCTGCTTGTATACATTCTCCGCAAGATTTGGCATTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NVNFCGSPYLYTTHN*ALLVYILRKIWHLL Trigger: AAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGAGAACCACAGAAGTTTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124826.2 |
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| CDS CAA 72 bp | GTAATGTCTTCTGGCCGGAGCTTCTCTGCCATCCCTTaGCTGCGATTGGTGACATTTTTATTTTTCTTTATA | + |
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Preference number: 6 (lower is better) Translates to: VMSSGRSFSAIP*LRLVTFLFFFI Trigger: TATAAAGAAAAATAAAAATGTCACCAATCGCAGCAAAGGGATGGCAGAGAAGCTCCGGCCAGAAGACATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090006.12 |
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| CDS CAA 90 bp | CACCACCCACAATTTGGCCCTGCTTGTATACATTCTCCGCAAGATTaGGCATTTGCTTTTAAACATCTATTTTTATCTGTTTGGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HHPQFGPACIHSPQD*AFAFKHLFLSVWPN Trigger: ATTTGGCCAAACAGATAAAAATAGATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| CDS TCA 72 bp | TTTTATCTGTTTGGCCAAATACAGAACAAATCAAACTaGTCAATCCAATCCAGGAAACCAGTTGCAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: FYLFGQIQNKSN*SIQSRKPVANS Trigger: TGAATTTGCAACTGGTTTCCTGGATTGGATTGATCAGTTTGATTTGTTCTGTATTTGGCCAAACAGATAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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| CDS CAA 72 bp | CAATTTGGCCCTGCTTGTATACATTCTCCGCAAGATTaGGCATTTGCTTTTAAACATCTATTTTTATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QFGPACIHSPQD*AFAFKHLFLSV Trigger: AACAGATAAAAATAGATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090006.12 ENSMUST00000124826.2 |
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