Pregenerated sensors for ITGAE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005947Ensembl transcript IDs: ENSMUST00000006101.4
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCATAGTGTGTGGCTATaGACAACACTCTACAGTTCT | + |
Preference number: 2 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNHSVWL*TTLYSS Trigger: AGAACTGTAGAGTGTTGTTCATAGCCACACACTATG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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3UTR TCA 72 bp | ATAGTGTGTGGCTATGAACAACACTCTACAGTTCTTTaGTGTTGCTTGATCGTCCTAAGGAGAGTAAGGGGC | + |
Preference number: 3 (lower is better) Translates to: IVCGYEQHSTVL*CCLIVLRRVRG Trigger: GCCCCTTACTCTCCTTAGGACGATCAAGCAACATCAAAGAACTGTAGAGTGTTGTTCATAGCCACACACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCTGGCCCCGTCACCTaGCCCAAAACCCTCCAGAGG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFAGPVT*PKTLQR Trigger: CCTCTGGAGGGTTTTGGGGCAGGTGACGGGGCCAGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCGGCGTCTCCTGGCTaGCTTCTTCTCCTCCCCTGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPASPG*LLLLPC Trigger: ACAGGGGAGGAGAAGAAGTCAGCCAGGAGACGCCGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCACACGCAGGCTCTTaGCTCTGGGTGCACTCAGTG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPHAGS*LWVHSV Trigger: CACTGAGTGCACCCAGAGTCAAGAGCCTGCGTGTGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCCCCACGGAGCTTGTaGCTTGGAGCCCCTGCCACG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNAPRSL*LGAPAT Trigger: CGTGGCAGGGGCTCCAAGGCACAAGCTCCGTGGGGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCCGGTGCACCTGGCTaGAGTGCTGTGACCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNAGAPG*SAVTQA Trigger: GGCCTGGGTCACAGCACTCCAGCCAGGTGCACCGGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCTGTCCGGCGTCTCCTaGCTGACTTCTTCTCCTCCC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFLSGVS*LTSSPP Trigger: GGGAGGAGAAGAAGTCAGCCAGGAGACGCCGGACAG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCTGTCAGCCTTCAGCTaGGCCCTCCTTGTGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFLSAFS*ALLVLS Trigger: GGAGAGCACAAGGAGGGCCCAGCTGAAGGCTGACAG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCCACCACCAGTTCCTaGTGGGAGATGTTGGTGGTC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPTTSS*WEMLVV Trigger: GACCACCAACATCTCCCAGCAGGAACTGGTGGTGGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTCCTCCTTGGCTGTCTaGTTTAGGAAGCAGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSSLAV*FRKQPR Trigger: CCGGGGCTGCTTCCTAAACCAGACAGCCAAGGAGGA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGTCCAGGGTGGGGTTaGGGTAGTCCCTCCTTCCCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGPGWG*GSPSFP Trigger: GGGGAAGGAGGGACTACCCCAACCCCACCCTGGACC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCTGGCTGGAGTGCTGTaGCCCAGGCCCAGTCCACAT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNLAGVL*PRPSPH Trigger: ATGTGGACTGGGCCTGGGTCACAGCACTCCAGCCAG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTTGTTGCTGGGGTCTTaGTGCAGAAGGGAGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFLLLGS*CRRELS Trigger: GCTCAGCTCCCTTCTGCATCAAGACCCCAGCAACAA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCTGAGCACAGCCGGTaGACCTGGCTGGAGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNAEHSR*TWLECC Trigger: ACAGCACTCCAGCCAGGTGCACCGGCTGTGCTCAGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATCACGGCCCCATACTaGACCAGGGCAAAGTTGCAC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFITAPY*TRAKLH Trigger: GTGCAACTTTGCCCTGGTGCAGTATGGGGCCGTGAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCCGGCCATTCTGTGTaGTGTAGAGCAGCGCACCCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPGHSV*CRAAHP Trigger: GGGGTGCGCTGCTCTACAGCACACAGAATGGCCGGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCTCGAGTCCTCACACTaGAGCCTCTGCCTTTGCTTG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFLESSH*SLCLCL Trigger: CAAGCAAAGGCAGAGGCTGCAGTGTGAGGACTCGAG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAATTGAAGGCTCCCTaGGGCTTCAGGCTGGCCATG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKLKAP*GFRLAM Trigger: CATGGCCAGCCTGAAGCCCCAGGGAGCCTTCAATTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCATCACCCACCCCAATaGCAAAGCGCACAACACCCT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFHHPPQ*QSAQHP Trigger: AGGGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCCTCTGCCTTTGCTTaGTCACATCCACATCCACCG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFASAFA*SHPHPP Trigger: CGGTGGATGTGGATGTGACCAAGCAAAGGCAGAGGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTTCCGGGCCTGTACCTaGATGCACACCAAAACACCA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFFRACT*MHTKTP Trigger: TGGTGTTTTGGTGTGCATTCAGGTACAGGCCCGGAA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGCACCCGTGAGCTCTaGGTTGAGGCTGCGGAACTT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGTREL*VEAAEL Trigger: AAGTTCCGCAGCCTCAACTCAGAGCTCACGGGTGCC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGGGTTCAATGCTTCCTaGGCCATCCAGGACAATAGC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFGFNAS*AIQDNS Trigger: GCTATTGTCCTGGATGGCTCAGGAAGCATTGAACCC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGGCAGGTCTGGTTGTTaGTGGGGTCTTGATGCAGAA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFGRSGC*WGLDAE Trigger: TTCTGCATCAAGACCCCAGCAACAACCAGACCTGCC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTTGGTGAGCCCAGGGTaGCCACTCAGTGTGTGTGCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNLVSPG*PLSVCA Trigger: GGCACACACACTGAGTGGGCACCCTGGGCTCACCAA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAGGTCTGGTTGTTGCTaGGGTCTTGATGCAGAAGGG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFRSGCC*GLDAEG Trigger: CCCTTCTGCATCAAGACCCCAGCAACAACCAGACCT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCTGGTACCTGCCCTTTaGCATACAGATGTGCTCCAC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFLVPAL*HTDVLH Trigger: GTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCCTTGTCCAGGATCTaGGCACTGAAACCAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPLSRI*ALKPVC Trigger: ACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTGTAGTGGTCCAGGGTaGGGTTGGGGTAGTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNCSGPG*GWGSPS Trigger: GGAGGGACTACCCCAACCCCACCCTGGACCACTACA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAGGGCAGCTGGAAGATaGCAGAGGGTTCCTTGTAGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFRAAGR*QRVPCS Trigger: ACTACAAGGAACCCTCTGCCATCTTCCAGCTGCCCT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGTGATCTTCGTCCTGTaGTTCTCTGCATTCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFVIFVL*FSAFSP Trigger: GGGGCTGAATGCAGAGAACCACAGGACGAAGATCAC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAGTAGTTGGTCACCTTaGAAGTGTGGGCCTCTTTGG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSSWSP*KCGPLW Trigger: CCAAAGAGGCCCACACTTTCAAGGTGACCAACTACT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAGGCATGTCTGAATTaGAGGCTGCGTGTCTCTCTG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKACLN*RLRVSL Trigger: CAGAGAGACACGCAGCCTTCAATTCAGACATGCCTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTTTGGCATACAGATGTaGTCCACTGGCTGGCAAGCA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFFGIQM*STGWQA Trigger: TGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAGCGCACAACACCCTaGATCTTTGGGGAGTTGATG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKRTTP*IFGELM Trigger: CATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCTGGGGCTTCAGGCTaGCCATGCAGAGAAGGGTAT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPGASG*PCREGY Trigger: ATACCCTTCTCTGCATGGCCAGCCTGAAGCCCCAGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTACCAATGTCACTCCCTaGTACCTGCCCTTTGGCATA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFTNVTP*YLPFGI Trigger: TATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATGTTGGTGGTCAGCTaGATCTCAGCGATGCAGAAC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFMLVVS*ISAMQN Trigger: GTTCTGCATCGCTGAGATCCAGCTGACCACCAACAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGCCTCTTTGGGGTCTaGGGCAATCAGCTTCAGTTC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGLFGV*GNQLQF Trigger: GAACTGAAGCTGATTGCCTCAGACCCCAAAGAGGCC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCAGGATCTGGGCACTaGAACCAGTCTGTGCGAGTT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPGSGH*NQSVRV Trigger: AACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGTTCATGTACATCACTaGGGGTCTGGAAAGAACTGC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFVHVHH*GSGKNC Trigger: GCAGTTCTTTCCAGACCCTCAGTGATGTACATGAAC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCACTCAGTGTGGTCCTaGGTCTTTGTCAGATTCTTC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFHSVWS*VFVRFF Trigger: GAAGAATCTGACAAAGACTCAGGACCACACTGAGTG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGGTACACATAGACTCTaGCTTCTTCTCCACGGATGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFGTHRL*LLLHGC Trigger: ACATCCGTGGAGAAGAAGGCAGAGTCTATGTGTACC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCTCTTGACTCTGGGTaGACTCAGTGTGGTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNALDSG*TQCGPE Trigger: CTCAGGACCACACTGAGTGCACCCAGAGTCAAGAGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATGTGCTCCACTGGCTaGCAAGCAATTTCATCTGGA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFMCSTG*QAISSG Trigger: TCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAACACCCTGCATCTTTaGGGAGTTGATGACAGTCGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFNTLHL*GVDDSR Trigger: ACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGTCCACATCCAAATTaGAGGCTCCCTGGGGCTTCA | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSPHPN*RLPGAS Trigger: TGAAGCCCCAGGGAGCCTTCAATTTGGATGTGGACT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCAGCCCATCCAGAGCTaGGTAGTTGGTCACCTTGAA | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNQPIQS*VVGHLE Trigger: TTCAAGGTGACCAACTACTCAGCTCTGGATGGGCTG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTCACAGATGATCTCTTaGGTATGGGGTGACCAATCT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSQMIS*VWGDQS Trigger: AGATTGGTCACCCCATACTCAAGAGATCATCTGTGA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCTTCAGGCTGGCCATaGAGAGAAGGGTATGGAAGA | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNASGWP*REGYGR Trigger: TCTTCCATACCCTTCTCTGCATGGCCAGCCTGAAGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTCTTCTCCTCCCCTGTaGTGCCTCCTTTGCTTCTAC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSSPPL*CLLCFY Trigger: GTAGAAGCAAAGGAGGCAGCACAGGGGAGGAGAAGA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGTTGTTATTCTTGAATaGATCACCCACCCCAATGGC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFVVILE*ITHPNG Trigger: GCCATTGGGGTGGGTGATGCATTCAAGAATAACAAC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCCACTCAGTGTGTGTaGCAAGGAGAAGGAAGCATC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPTQCV*QGEGSI Trigger: GATGCTTCCTTCTCCTTGGCACACACACTGAGTGGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTCACACTGCAGCCTCTaGCTTTGCTTGGTCACATCC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSHCSL*LCLVTS Trigger: GGATGTGACCAAGCAAAGGCAGAGGCTGCAGTGTGA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTGCCATTCTTTTACATaGTGCACAGGATCGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFCHSFT*CTGSLP Trigger: TGGAAGCGATCCTGTGCAGCATGTAAAAGAATGGCA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCACAGACCACTGAATaGCATTCTTTTACATGCTGC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFAQTTE*HSFTCC Trigger: GCAGCATGTAAAAGAATGGCATTCAGTGGTCTGTGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCTGGGCCCTCCTTGTaGTCTCCAAGTTCAGTTGTT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNAGPSL*SPSSVV Trigger: AACAACTGAACTTGGAGAGCACAAGGAGGGCCCAGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTCACCTTGAAAGTGTaGGCCTCTTTGGGGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVTLKV*ASLGSE Trigger: CTCAGACCCCAAAGAGGCCCACACTTTCAAGGTGAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTCCTGGAGTCCTCCTTaGCTGTCTGGTTTAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSWSPP*LSGLGS Trigger: GCTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
||
CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCAGGACAGAAGCAACTaGCTTGGGGTCATCACACTG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNQDRSN*LGVITL Trigger: CAGTGTGATGACCCCAAGCCAGTTGCTTCTGTCCTG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGCTGCGTGTCTCTCTaGCCAAAGACTTCTCATTGG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGCVSL*PKTSHW Trigger: CCAATGAGAAGTCTTTGGCCAGAGAGACACGCAGCC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTGGTCAGAAGGGCTTTaGCTTGTGTTCATGTACATC | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFWSEGL*LVFMYI Trigger: GATGTACATGAACACAAGCCAAAGCCCTTCTGACCA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAGTGTTGTTATTCTTaGATGCATCACCCACCCCAA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKCCYS*MHHPPQ Trigger: TTGGGGTGGGTGATGCATTCAAGAATAACAACACTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGTCTGAGGGTTCAATaGTTCCTGAGCCATCCAGGA | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSLRVQ*FLSHPG Trigger: TCCTGGATGGCTCAGGAAGCATTGAACCCTCAGACT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATATATTGTCTAGGACATaGTGCATGGCTGAGGCGGTC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNILSRT*CMAEAV Trigger: GACCGCCTCAGCCATGCAGCATGTCCTAGACAATAT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATGGGGACACAAATTTaGAACTGGAATACAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFMGTQI*NWNTAP Trigger: TGGAGCTGTATTCCAGTTGCAAATTTGTGTCCCCAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCAAGCAATTTCATCTaGACTGATGGATATAGCGCA | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFASNFI*TDGYSA Trigger: TGCGCTATATCCATCAGTCCAGATGAAATTGCTTGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGATCAAACTCAGTCTaGATCACGGCCCCATACTGC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNRSNSV*ITAPYC Trigger: GCAGTATGGGGCCGTGATCCAGACTGAGTTTGATCT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTGTACTGTACAGTCCTaGAGTCCTCCTTGGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNCTVQS*SPPWLS Trigger: AGACAGCCAAGGAGGACTCCAGGACTGTACAGTACA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTCTGTGAATTTGTCTTaGTTGATATCCCCCACAGCT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSVNLS*LISPTA Trigger: AGCTGTGGGGGATATCAACCAAGACAAATTCACAGA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCAAAGACTTCTCATTaGAATTGGAGATGGTCACAG | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPKTSH*NWRWSQ Trigger: CTGTGACCATCTCCAATTCCAATGAGAAGTCTTTGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAGTTTCTGGGATAATTaGGAGCCATGTTTGTCATGT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSFWDN*EPCLSC Trigger: ACATGACAAACATGGCTCTCAATTATCCCAGAAACT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCAATCTTGCAGTTCATaGCCAGGACAGAAGCAACTG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNQSCSS*PGQKQL Trigger: CAGTTGCTTCTGTCCTGGTCATGAACTGCAAGATTG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGGCCTGTACCTGAATaGACACCAAAACACCATTGT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGPVPE*TPKHHC Trigger: ACAATGGTGTTTTGGTGTGCATTCAGGTACAGGCCC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAGAAGAATTCTTTGTaGTCAGAAGGGCTTTGGCTT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKKNSL*SEGLWL Trigger: AAGCCAAAGCCCTTCTGACCACAAAGAATTCTTCTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGCCACGGCTTGGAATaGAGATATTGTCTAGGACAT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSHGLE*RYCLGH Trigger: ATGTCCTAGACAATATCTTCATTCCAAGCCGTGGCT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGCACCAGGGCAAAGTTaGACTCAAAACACTTCTCAT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNAPGQS*TQNTSH Trigger: ATGAGAAGTGTTTTGAGTGCAACTTTGCCCTGGTGC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATACTGAAACCAGTCTGTaGGAGTTGATATTGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNTETSL*ELILKG Trigger: GCCCTTCAATATCAACTCGCACAGACTGGTTTCAGT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCATTCTTTTACATGCTaGACAGGATCGCTTCCACAC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNHSFTC*TGSLPH Trigger: GTGTGGAAGCGATCCTGTGCAGCATGTAAAAGAATG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATCACACTGAACATCTaGAGATACTGGCTTTTGTAT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFITLNI*RYWLLY Trigger: ATACAAAAGCCAGTATCTCCAGATGTTCAGTGTGAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTCTCCCCATGCACATTaGAGAAGAATTCTTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSPHAH*RRILCG Trigger: ACCACAAAGAATTCTTCTTCAATGTGCATGGGGAGA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR TCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGATAGCACAGACCACTaGATGCCATTCTTTTACATG | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNDSTDH*MPFFYM Trigger: CATGTAAAAGAATGGCATTCAGTGGTCTGTGCTATC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGGTCACAGTGATATCTaGTGTCCTATTTGGAAAGAC | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNGHSDI*CPIWKD Trigger: GTCTTTCCAAATAGGACAGCAGATATCACTGTGACC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR GCA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAAAAGATTCTCCCCATaGACATTGAAGAAGAATTCT | + |
Preference number: 4 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFKRFSP*TLKKNS Trigger: AGAATTCTTCTTCAATGTGCATGGGGAGAATCTTTT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CCA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCAGTAGAAAATCTGTaGTCCCATCCATGTCGATAT | + |
Preference number: 4 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPVENL*SHPCRY Trigger: ATATCGACATGGATGGGACCACAGATTTTCTACTGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | GTTGTTGCTGGGGTCTTGATGCAGAAGGGAGCTGAGCACAGCCGGTaGACCTGGCTGGAGTGCTGTGACCCAGGCCCAGTCCACATCCAA | + |
Preference number: 5 (lower is better) Translates to: VVAGVLMQKGAEHSR*TWLECCDPGPVHIQ Trigger: TTGGATGTGGACTGGGCCTGGGTCACAGCACTCCAGCCAGGTGCACCGGCTGTGCTCAGCTCCCTTCTGCATCAAGACCCCAGCAACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | GCTGGGGTCTTGATGCAGAAGGGAGCTGAGCACAGCCGGTGCACCTaGCTGGAGTGCTGTGACCCAGGCCCAGTCCACATCCAAATTGAA | + |
Preference number: 5 (lower is better) Translates to: AGVLMQKGAEHSRCT*LECCDPGPVHIQIE Trigger: TTCAATTTGGATGTGGACTGGGCCTGGGTCACAGCACTCCAGCCAGGTGCACCGGCTGTGCTCAGCTCCCTTCTGCATCAAGACCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | AGTGCTGTGACCCAGGCCCAGTCCACATCCAAATTGAAGGCTCCCTaGGGCTTCAGGCTGGCCATGCAGAGAAGGGTATGGAAGAGCCAC | + |
Preference number: 5 (lower is better) Translates to: SAVTQAQSTSKLKAP*GFRLAMQRRVWKSH Trigger: GTGGCTCTTCCATACCCTTCTCTGCATGGCCAGCCTGAAGCCCCAGGGAGCCTTCAATTTGGATGTGGACTGGGCCTGGGTCACAGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CCACTGTCCGGCGTCTCCTGGCTGACTTCTTCTCCTCCCCTGTGCTaGCTCCTTTGCTTCTACAGTAGTCACCAGAGTCCACATGTGCTC | + |
Preference number: 5 (lower is better) Translates to: PLSGVSWLTSSPPLC*LLCFYSSHQSPHVL Trigger: GAGCACATGTGGACTCTGGTGACTACTGTAGAAGCAAAGGAGGCAGCACAGGGGAGGAGAAGAAGTCAGCCAGGAGACGCCGGACAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CCTCCACTGTCCGGCGTCTCCTGGCTGACTTCTTCTCCTCCCCTGTaGTGCCTCCTTTGCTTCTACAGTAGTCACCAGAGTCCACATGTG | + |
Preference number: 5 (lower is better) Translates to: PPLSGVSWLTSSPPL*CLLCFYSSHQSPHV Trigger: CACATGTGGACTCTGGTGACTACTGTAGAAGCAAAGGAGGCAGCACAGGGGAGGAGAAGAAGTCAGCCAGGAGACGCCGGACAGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | ACAGCTGCCATGGCAAAGCCAAAGCGGCTATTGGTGAGCCCAGGGTaGCCACTCAGTGTGTGTGCCAAGGAGAAGGAAGCATCCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: TAAMAKPKRLLVSPG*PLSVCAKEKEASCS Trigger: TGAGCAGGATGCTTCCTTCTCCTTGGCACACACACTGAGTGGGCACCCTGGGCTCACCAATAGCCGCTTTGGCTTTGCCATGGCAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | TGTTCACACAGAAAGGACCCTCCGTTCCACTTCCTGAGGCAGCTCTaGCAACCGCTCGAGTCCTCACACTGCAGCCTCTGCCTTTGCTTG | + |
Preference number: 5 (lower is better) Translates to: CSHRKDPPFHFLRQL*QPLESSHCSLCLCL Trigger: CAAGCAAAGGCAGAGGCTGCAGTGTGAGGACTCGAGCGGTTGTCAGAGCTGCCTCAGGAAGTGGAACGGAGGGTCCTTTCTGTGTGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | GTAGCACCGCAAGGGAGTAACCTAGGTAGCTGTACTGTACAGTCCTaGAGTCCTCCTTGGCTGTCTGGTTTAGGAAGCAGCCCCGGCCAT | + |
Preference number: 5 (lower is better) Translates to: VAPQGSNLGSCTVQS*SPPWLSGLGSSPGH Trigger: ATGGCCGGGGCTGCTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGACTGTACAGTACAGCTACCTAGGTTACTCCCTTGCGGTGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CTGATGTTCATGGTCACCTCCTTTGTGACGCCCACCACCAGTTCCTaGTGGGAGATGTTGGTGGTCAGCTGGATCTCAGCGATGCAGAAC | + |
Preference number: 5 (lower is better) Translates to: LMFMVTSFVTPTTSS*WEMLVVSWISAMQN Trigger: GTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGTGGGCGTCACAAAGGAGGTGACCATGAACATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | GCAGCTTGCTCAGCAGCCCATCCAGAGCTGAGTAGTTGGTCACCTTaGAAGTGTGGGCCTCTTTGGGGTCTGAGGCAATCAGCTTCAGTT | + |
Preference number: 5 (lower is better) Translates to: AACSAAHPELSSWSP*KCGPLWGLRQSASV Trigger: AACTGAAGCTGATTGCCTCAGACCCCAAAGAGGCCCACACTTTCAAGGTGACCAACTACTCAGCTCTGGATGGGCTGCTGAGCAAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | CCACAGTGCCAAGCAACACCTGCCCCTTGTCCAGGATCTGGGCACTaGAACCAGTCTGTGCGAGTTGATATTGAAGGGCATCTCCAACTG | + |
Preference number: 5 (lower is better) Translates to: PQCQATPAPCPGSGH*NQSVRVDIEGHLQL Trigger: CAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGGGCAGGTGTTGCTTGGCACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | AATGGCCACATCTGTGAATTTGTCTTGGTTGATATCCCCCACAGCTaGCATGGCAAAGCCAAAGCGGCTATTGGTGAGCCCAGGGTGCCC | + |
Preference number: 5 (lower is better) Translates to: NGHICEFVLVDIPHS*HGKAKAAIGEPRVP Trigger: GGGCACCCTGGGCTCACCAATAGCCGCTTTGGCTTTGCCATGGCAGCTGTGGGGGATATCAACCAAGACAAATTCACAGATGTGGCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CCAGTTCCTGCTGGGAGATGTTGGTGGTCAGCTGGATCTCAGCGATaGAGAACACTTTGTTCTTGCAGTCCTTCTCGTAGGGCAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: PVPAGRCWWSAGSQR*RTLCSCSPSRRAAG Trigger: TCCAGCTGCCCTACGAGAAGGACTGCAAGAACAAAGTGTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | AGAACACTTTGTTCTTGCAGTCCTTCTCGTAGGGCAGCTGGAAGATaGCAGAGGGTTCCTTGTAGTGGTCCAGGGTGGGGTTGGGGTAGT | + |
Preference number: 5 (lower is better) Translates to: RTLCSCSPSRRAAGR*QRVPCSGPGWGWGS Trigger: ACTACCCCAACCCCACCCTGGACCACTACAAGGAACCCTCTGCCATCTTCCAGCTGCCCTACGAGAAGGACTGCAAGAACAAAGTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | ATGTTCATGGTCACCTCCTTTGTGACGCCCACCACCAGTTCCTGCTaGGAGATGTTGGTGGTCAGCTGGATCTCAGCGATGCAGAACACT | + |
Preference number: 5 (lower is better) Translates to: MFMVTSFVTPTTSSC*EMLVVSWISAMQNT Trigger: AGTGTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGTGGGCGTCACAAAGGAGGTGACCATGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | TGTGCTGCCTCCTTTGCTTCTACAGTAGTCACCAGAGTCCACATGTaGTCCTGGATCCAGGAACCCTTCGAGGTCAGAGAAGTAGGCTTG | + |
Preference number: 5 (lower is better) Translates to: CAASFASTVVTRVHM*SWIQEPFEVREVGL Trigger: CAAGCCTACTTCTCTGACCTCGAAGGGTTCCTGGATCCAGGAGCACATGTGGACTCTGGTGACTACTGTAGAAGCAAAGGAGGCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CCAAAACACCATTGTGGTTCCCGACCAATGTCACTCCCTGGTACCTaGCCTTTGGCATACAGATGTGCTCCACTGGCTGGCAAGCAATTT | + |
Preference number: 5 (lower is better) Translates to: PKHHCGSRPMSLPGT*PLAYRCAPLAGKQF Trigger: AAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGTCGGGAACCACAATGGTGTTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | AGGAGAAGGAAGCATCCTGCTCAGGCACCTGGTACACATAGACTCTaGCTTCTTCTCCACGGATGTGGTAAAATGGAGCAGCCACCAGTA | + |
Preference number: 5 (lower is better) Translates to: RRRKHPAQAPGTHRL*LLLHGCGKMEQPPV Trigger: TACTGGTGGCTGCTCCATTTTACCACATCCGTGGAGAAGAAGGCAGAGTCTATGTGTACCAGGTGCCTGAGCAGGATGCTTCCTTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CATGCTGCACAGGATCGCTTCCACACGCAGGCTCTTGACTCTGGGTaGACTCAGTGTGGTCCTGAGTCTTTGTCAGATTCTTCACTCTTA | + |
Preference number: 5 (lower is better) Translates to: HAAQDRFHTQALDSG*TQCGPESLSDSSLL Trigger: TAAGAGTGAAGAATCTGACAAAGACTCAGGACCACACTGAGTGCACCCAGAGTCAAGAGCCTGCGTGTGGAAGCGATCCTGTGCAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | TGTCACTCCCTGGTACCTGCCCTTTGGCATACAGATGTGCTCCACTaGCTGGCAAGCAATTTCATCTGGACTGATGGATATAGCGCATCG | + |
Preference number: 5 (lower is better) Translates to: CHSLVPALWHTDVLH*LASNFIWTDGYSAS Trigger: CGATGCGCTATATCCATCAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTACAGCCCCACGGAGCTaGTGCCTTGGAGCCCCTGCC | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFTAPRS*CLGAPA Trigger: GGCAGGGGCTCCAAGGCACAAGCTCCGTGGGGCTGT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CCGACCAATGTCACTCCCTGGTACCTGCCCTTTGGCATACAGATGTaGTCCACTGGCTGGCAAGCAATTTCATCTGGACTGATGGATATA | + |
Preference number: 5 (lower is better) Translates to: PTNVTPWYLPFGIQM*STGWQAISSGLMDI Trigger: TATATCCATCAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | TTCTTGAATGCATCACCCACCCCAATGGCAAAGCGCACAACACCCTaGATCTTTGGGGAGTTGATGACAGTCGTAAGATTGAGAGGGTCC | + |
Preference number: 5 (lower is better) Translates to: FLNASPTPMAKRTTP*IFGELMTVVRLRGS Trigger: GGACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATGCATTCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | CAACACCTGCCCCTTGTCCAGGATCTGGGCACTGAAACCAGTCTGTaGGAGTTGATATTGAAGGGCATCTCCAACTGTACCTTCCATATG | + |
Preference number: 5 (lower is better) Translates to: QHLPLVQDLGTETSL*ELILKGISNCTFHM Trigger: CATATGGAAGGTACAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGGGCAGGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | ACTCCCTGGTACCTGCCCTTTGGCATACAGATGTGCTCCACTGGCTaGCAAGCAATTTCATCTGGACTGATGGATATAGCGCATCGATAC | + |
Preference number: 5 (lower is better) Translates to: TPWYLPFGIQMCSTG*QAISSGLMDIAHRY Trigger: GTATCGATGCGCTATATCCATCAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | TGCATCACCCACCCCAATGGCAAAGCGCACAACACCCTGCATCTTTaGGGAGTTGATGACAGTCGTAAGATTGAGAGGGTCCCCAAATAT | + |
Preference number: 5 (lower is better) Translates to: CITHPNGKAHNTLHL*GVDDSRKIERVPKY Trigger: ATATTTGGGGACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | GGTCTGAGGCAATCAGCTTCAGTTCTCTGTAAGTGTTGTTATTCTTaGATGCATCACCCACCCCAATGGCAAAGCGCACAACACCCTGCA | + |
Preference number: 5 (lower is better) Translates to: GLRQSASVLCKCCYS*MHHPPQWQSAQHPA Trigger: TGCAGGGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATGCATTCAAGAATAACAACACTTACAGAGAACTGAAGCTGATTGCCTCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | TGCCAAGTTACTGAGACATTCACAGATGATCTCTTGAGTATGGGGTaGCCAATCTTGCAGTTCATGACCAGGACAGAAGCAACTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: CQVTETFTDDLLSMG*PILQFMTRTEATGL Trigger: CAAGCCAGTTGCTTCTGTCCTGGTCATGAACTGCAAGATTGGTCACCCCATACTCAAGAGATCATCTGTGAATGTCTCAGTAACTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | ATCACTGAGGGTCTGGAAAGAACTGCAATGAAGGCATGTCTGAATTaGAGGCTGCGTGTCTCTCTGGCCAAAGACTTCTCATTGGAATTG | + |
Preference number: 5 (lower is better) Translates to: ITEGLERTAMKACLN*RLRVSLAKDFSLEL Trigger: CAATTCCAATGAGAAGTCTTTGGCCAGAGAGACACGCAGCCTTCAATTCAGACATGCCTTCATTGCAGTTCTTTCCAGACCCTCAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGTTGTTGCTGGGGTCTaGATGCAGAAGGGAGCTGAG | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFVVAGV*MQKGAE Trigger: CTCAGCTCCCTTCTGCATCAAGACCCCAGCAACAAC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTCCTGGTACCTGCCCTTaGGCATACAGATGTGCTCCA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFPGTCP*AYRCAP Trigger: TGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGG...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCCCGTGAGCTCTGAGTaGAGGCTGCGGAACTTCCGG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNPVSSE*RLRNFR Trigger: CCGGAAGTTCCGCAGCCTCAACTCAGAGCTCACGGG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAGCCTCTGCCTTTGCTaGGTCACATCCACATCCACC | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSLCLC*VTSTST Trigger: GGTGGATGTGGATGTGACCAAGCAAAGGCAGAGGCT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTCCTGCTGGGAGATGTaGGTGGTCAGCTGGATCTCA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFSCWEM*VVSWIS Trigger: TGAGATCCAGCTGACCACCAACATCTCCCAGCAGGA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | TCCCCATGCACATTGAAGAAGAATTCTTTGTGGTCAGAAGGGCTTTaGCTTGTGTTCATGTACATCACTGAGGGTCTGGAAAGAACTGCA | + |
Preference number: 5 (lower is better) Translates to: SPCTLKKNSLWSEGL*LVFMYITEGLERTA Trigger: TGCAGTTCTTTCCAGACCCTCAGTGATGTACATGAACACAAGCCAAAGCCCTTCTGACCACAAAGAATTCTTCTTCAATGTGCATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATGTGTTGTTGCAGCTaGCTCAGCAGCCCATCCAGA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFMCCCS*LSSPSR Trigger: TCTGGATGGGCTGCTGAGCAAGCTGCAACAACACAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATGAACGATGTGTTGTaGCAGCTTGCTCAGCAGCCC | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFMNDVL*QLAQQP Trigger: GGGCTGCTGAGCAAGCTGCAACAACACATCGTTCAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGCAACACCTGCCCCTaGTCCAGGATCTGGGCACTG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSNTCP*SRIWAL Trigger: CAGTGCCCAGATCCTGGACAAGGGGCAGGTGTTGCT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAAGCCAAAGCGGCTATaGGTGAGCCCAGGGTGCCCA | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNKPKRL*VSPGCP Trigger: TGGGCACCCTGGGCTCACCAATAGCCGCTTTGGCTT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 90 bp | ACAGTGATATCTGCTGTCCTATTTGGAAAGACACTCTCCTCTAGCTaGCAAGTTACTGAGACATTCACAGATGATCTCTTGAGTATGGGG | + |
Preference number: 5 (lower is better) Translates to: TVISAVLFGKTLSSS*QVTETFTDDLLSMG Trigger: CCCCATACTCAAGAGATCATCTGTGAATGTCTCAGTAACTTGGCAGCTAGAGGAGAGTGTCTTTCCAAATAGGACAGCAGATATCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 90 bp | GCTCCAAAAAGATTCTCCCCATGCACATTGAAGAAGAATTCTTTGTaGTCAGAAGGGCTTTGGCTTGTGTTCATGTACATCACTGAGGGT | + |
Preference number: 5 (lower is better) Translates to: APKRFSPCTLKKNSL*SEGLWLVFMYITEG Trigger: ACCCTCAGTGATGTACATGAACACAAGCCAAAGCCCTTCTGACCACAAAGAATTCTTCTTCAATGTGCATGGGGAGAATCTTTTTGGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCGATGCAGAACACTTaGTTCTTGCAGTCCTTCTCG | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFAMQNT*FLQSFS Trigger: CGAGAAGGACTGCAAGAACAAAGTGTTCTGCATCGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | AAAGTTGAGGAACATCTCTCTAAGGCCTGGCTCAGAAGCTACGCCTaGAGAGTCAACTTCAAAACACAGTTTTACATCCATCTTGCCTAT | + |
Preference number: 5 (lower is better) Translates to: KVEEHLSKAWLRSYA*RVNFKTQFYIHLAY Trigger: ATAGGCAAGATGGATGTAAAACTGTGTTTTGAAGTTGACTCTTCAGGCGTAGCTTCTGAGCCAGGCCTTAGAGAGATGTTCCTCAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCAGTCCACATCCAAATaGAAGGCTCCCTGGGGCTTC | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNQSTSK*KAPWGF Trigger: GAAGCCCCAGGGAGCCTTCAATTTGGATGTGGACTG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTCCCGGCTCTCTaGAAGATCAAACTCAGTCTG | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFNVPAL*KIKLSL Trigger: CAGACTGAGTTTGATCTTCAAGAGAGCCGGGACATT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTCCTGGAGTCCTCCTaGGCTGTCTGGTTTAGGAAG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVLESS*AVWFRK Trigger: CTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATCTGCAGCCTCTGCCTTaGCTTGGTCACATCCACATC | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNLQPLP*LGHIHI Trigger: GATGTGGATGTGACCAAGCAAAGGCAGAGGCTGCAG...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTCAGAGAAGTAGGCTaGGGCCTGGAGGTCCAAATT | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVREVG*GLEVQI Trigger: AATTTGGACCTCCAGGCCCAAGCCTACTTCTCTGAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTATCTGTGAATTTGTCTaGGTTGATATCCCCCACAGC | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFICEFV*VDIPHS Trigger: GCTGTGGGGGATATCAACCAAGACAAATTCACAGAT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTACATCCACCGTAAAGTaGAGGAACATCTCTCTAAGG | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFTSTVK*RNISLR Trigger: CCTTAGAGAGATGTTCCTCAACTTTACGGTGGATGT...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGCCAAAGACTTCTCATaGGAATTGGAGATGGTCACA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFAKDFS*ELEMVT Trigger: TGTGACCATCTCCAATTCCAATGAGAAGTCTTTGGC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTGAATTTGTCTTGGTaGATATCCCCCACAGCTGCC | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVNLSW*ISPTAA Trigger: GGCAGCTGTGGGGGATATCAACCAAGACAAATTCAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATACCTTGATGGTGATGTaGGAGAAGCAGTCCTCCTCA | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNTLMVM*EKQSSS Trigger: TGAGGAGGACTGCTTCTCCAACATCACCATCAAGGT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTGACTTCTCATTGGAATaGGAGATGGTCACAGTGATA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFDFSLE*EMVTVI Trigger: TATCACTGTGACCATCTCCAATTCCAATGAGAAGTC...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGAAGGCATGTCTGAATaGAAGGCTGCGTGTCTCTCT | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNEGMSE*KAACLS Trigger: AGAGAGACACGCAGCCTTCAATTCAGACATGCCTTC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTGTGGTCCTGAGTCTTaGTCAGATTCTTCACTCTTA | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFCGPES*SDSSLL Trigger: TAAGAGTGAAGAATCTGACAAAGACTCAGGACCACA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTGCACCAGGGCAAAGTaGCACTCAAAACACTTCTCA | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNCTRAK*HSKHFS Trigger: TGAGAAGTGTTTTGAGTGCAACTTTGCCCTGGTGCA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTGGTCAGAAGGGCTTaGGCTTGTGTTCATGTACAT | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVVRRA*ACVHVH Trigger: ATGTACATGAACACAAGCCAAAGCCCTTCTGACCAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATAGTTTTACATCCATCTaGCCTATGAAGACCATGGGC | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNSFTSI*PMKTMG Trigger: GCCCATGGTCTTCATAGGCAAGATGGATGTAAAACT...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | GGCAAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTTGGAAATCTTGTAATTaGATGGGGACACAAATTTGC | + |
Preference number: 5 (lower is better) Translates to: GKLGTVLIKGTAVKVNVFWKSCN*MGTQIC Trigger: GCAAATTTGTGTCCCCATCAAATTACAAGATTTCCA...AAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATGTAGAGATGAAATTTTaGGCCTTCTGGAAGTCTGAG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNVEMKF*AFWKSE Trigger: CTCAGACTTCCAGAAGGCCAAAAATTTCATCTCTAC...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTTGAAGAAGAATTCTTaGTGGTCAGAAGGGCTTTGG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNLKKNS*WSEGLW Trigger: CCAAAGCCCTTCTGACCACAAAGAATTCTTCTTCAA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS-3UTR CAA 90 bp | AAACTGGGAACCGTGCTCATTAAAGGCACTGCTGTAAAAGTAAATGTATTTAATTTCTCCCCATGCACATaGAAGAAGAATTCTTTGTGG | + |
Preference number: 5 (lower is better) Translates to: KLGTVLIKGTAVKVNVFNFSPCT*KKNSLW Trigger: CCACAAAGAATTCTTCTTCAATGTGCATGGGGAGAA...ATTAAATACATTTACTTTTACAGCAGTGCCTTTAATGAGCACGGTTCCCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 90 bp | TCTTTGTCAGATTCTTCACTCTTACAATCTGGAAATCTTGTAATTTaGTGGGGACACAAATTTGCAACTGGAATACAGCTCCAAAAAGAT | + |
Preference number: 5 (lower is better) Translates to: SLSDSSLLQSGNLVI*WGHKFATGIQLQKD Trigger: ATCTTTTTGGAGCTGTATTCCAGTTGCAAATTTGTGTCCCCATCAAATTACAAGATTTCCAGATTGTAAGAGTGAAGAATCTGACAAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | GCTGCGTCTGGCTACCAGGAGGCAGGTCTGGTTGTTGCTGGGGTCTaGATGCAGAAGGGAGCTGAGCACAGCCGGTGCACCTGGCTGGAG | + |
Preference number: 6 (lower is better) Translates to: AASGYQEAGLVVAGV*MQKGAEHSRCTWLE Trigger: CTCCAGCCAGGTGCACCGGCTGTGCTCAGCTCCCTTCTGCATCAAGACCCCAGCAACAACCAGACCTGCCTCCTGGTAGCCAGACGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | GGCTACCAGGAGGCAGGTCTGGTTGTTGCTGGGGTCTaGATGCAGAAGGGAGCTGAGCACAGCCGGTGCACC | + |
Preference number: 6 (lower is better) Translates to: GYQEAGLVVAGV*MQKGAEHSRCT Trigger: GGTGCACCGGCTGTGCTCAGCTCCCTTCTGCATCAAGACCCCAGCAACAACCAGACCTGCCTCCTGGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | GCACCTGGCTGGAGTGCTGTGACCCAGGCCCAGTCCACATCCAAATaGAAGGCTCCCTGGGGCTTCAGGCTGGCCATGCAGAGAAGGGTA | + |
Preference number: 6 (lower is better) Translates to: APGWSAVTQAQSTSK*KAPWGFRLAMQRRV Trigger: TACCCTTCTCTGCATGGCCAGCCTGAAGCCCCAGGGAGCCTTCAATTTGGATGTGGACTGGGCCTGGGTCACAGCACTCCAGCCAGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | AGAAAGGACCCTCCGTTCCACTTCCTGAGGCAGCTCTaGCAACCGCTCGAGTCCTCACACTGCAGCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: RKDPPFHFLRQL*QPLESSHCSLC Trigger: GCAGAGGCTGCAGTGTGAGGACTCGAGCGGTTGTCAGAGCTGCCTCAGGAAGTGGAACGGAGGGTCCTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | ACCCAGGCCCAGTCCACATCCAAATTGAAGGCTCCCTaGGGCTTCAGGCTGGCCATGCAGAGAAGGGTATGG | + |
Preference number: 6 (lower is better) Translates to: TQAQSTSKLKAP*GFRLAMQRRVW Trigger: CCATACCCTTCTCTGCATGGCCAGCCTGAAGCCCCAGGGAGCCTTCAATTTGGATGTGGACTGGGCCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | ATGGTCACCTCCTTTGTGACGCCCACCACCAGTTCCTaGTGGGAGATGTTGGTGGTCAGCTGGATCTCAGCG | + |
Preference number: 6 (lower is better) Translates to: MVTSFVTPTTSS*WEMLVVSWISA Trigger: CGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGTGGGCGTCACAAAGGAGGTGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | GTCACCTCCTTTGTGACGCCCACCACCAGTTCCTGCTaGGAGATGTTGGTGGTCAGCTGGATCTCAGCGATG | + |
Preference number: 6 (lower is better) Translates to: VTSFVTPTTSSC*EMLVVSWISAM Trigger: CATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGTGGGCGTCACAAAGGAGGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | TTAAAGGCCCCCACAGTGCCAAGCAACACCTGCCCCTaGTCCAGGATCTGGGCACTGAAACCAGTCTGTGCG | + |
Preference number: 6 (lower is better) Translates to: LKAPTVPSNTCP*SRIWALKPVCA Trigger: CGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGGGCAGGTGTTGCTTGGCACTGTGGGGGCCTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | CTGTACTGTACAGTCCTGGAGTCCTCCTTGGCTGTCTaGTTTAGGAAGCAGCCCCGGCCATTCTGTGTGCTG | + |
Preference number: 6 (lower is better) Translates to: LYCTVLESSLAV*FRKQPRPFCVL Trigger: CAGCACACAGAATGGCCGGGGCTGCTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGACTGTACAGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | TGTTCTTGCAGTCCTTCTCGTAGGGCAGCTGGAAGATaGCAGAGGGTTCCTTGTAGTGGTCCAGGGTGGGGT | + |
Preference number: 6 (lower is better) Translates to: CSCSPSRRAAGR*QRVPCSGPGWG Trigger: ACCCCACCCTGGACCACTACAAGGAACCCTCTGCCATCTTCCAGCTGCCCTACGAGAAGGACTGCAAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | GGTTCCCGACCAATGTCACTCCCTGGTACCTGCCCTTaGGCATACAGATGTGCTCCACTGGCTGGCAAGCAA | + |
Preference number: 6 (lower is better) Translates to: GSRPMSLPGTCP*AYRCAPLAGKQ Trigger: TTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGTCGGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | CAACCGCTCGAGTCCTCACACTGCAGCCTCTGCCTTTaGTTGGTCACATCCACATCCACCGTAAAGTTGAGG | + |
Preference number: 6 (lower is better) Translates to: QPLESSHCSLCL*LVTSTSTVKLR Trigger: CCTCAACTTTACGGTGGATGTGGATGTGACCAAGCAAAGGCAGAGGCTGCAGTGTGAGGACTCGAGCGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | CTAGGTAGCTGTACTGTACAGTCCTGGAGTCCTCCTTaGCTGTCTGGTTTAGGAAGCAGCCCCGGCCATTCT | + |
Preference number: 6 (lower is better) Translates to: LGSCTVQSWSPP*LSGLGSSPGHS Trigger: AGAATGGCCGGGGCTGCTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGACTGTACAGTACAGCTACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | CCGCTCGAGTCCTCACACTGCAGCCTCTGCCTTTGCTaGGTCACATCCACATCCACCGTAAAGTTGAGGAAC | + |
Preference number: 6 (lower is better) Translates to: PLESSHCSLCLC*VTSTSTVKLRN Trigger: GTTCCTCAACTTTACGGTGGATGTGGATGTGACCAAGCAAAGGCAGAGGCTGCAGTGTGAGGACTCGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | GTCACCTCCTTTGTGACGCCCACCACCAGTTCCTGCTGGGAGATGTaGGTGGTCAGCTGGATCTCAGCGATGCAGAACACTTTGTTCTTG | + |
Preference number: 6 (lower is better) Translates to: VTSFVTPTTSSCWEM*VVSWISAMQNTLFL Trigger: CAAGAACAAAGTGTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGTGGGCGTCACAAAGGAGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | TCAGCAGCCCATCCAGAGCTGAGTAGTTGGTCACCTTaGAAGTGTGGGCCTCTTTGGGGTCTGAGGCAATCA | + |
Preference number: 6 (lower is better) Translates to: SAAHPELSSWSP*KCGPLWGLRQS Trigger: TGATTGCCTCAGACCCCAAAGAGGCCCACACTTTCAAGGTGACCAACTACTCAGCTCTGGATGGGCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | GTCACTCCCTGGTACCTGCCCTTTGGCATACAGATGTaGTCCACTGGCTGGCAAGCAATTTCATCTGGACTG | + |
Preference number: 6 (lower is better) Translates to: VTPWYLPFGIQM*STGWQAISSGL Trigger: CAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | CAGGATCGCTTCCACACGCAGGCTCTTGACTCTGGGTaGACTCAGTGTGGTCCTGAGTCTTTGTCAGATTCT | + |
Preference number: 6 (lower is better) Translates to: QDRFHTQALDSG*TQCGPESLSDS Trigger: AGAATCTGACAAAGACTCAGGACCACACTGAGTGCACCCAGAGTCAAGAGCCTGCGTGTGGAAGCGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | CCAAGGATCGGCAGTTCAGATACATCTCTTAGTAACTaGTTAGTGTGGCCCACGGAGATCTCTGCGGCCACG | + |
Preference number: 6 (lower is better) Translates to: PRIGSSDTSLSN*LVWPTEISAAT Trigger: CGTGGCCGCAGAGATCTCCGTGGGCCACACTAAGCAGTTACTAAGAGATGTATCTGAACTGCCGATCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | CGAGAGCCAACTGTGATATCGGCAAGGCCATCGCCATaGAAATCTAACCCACCGGACACAGACATGCCGAAG | + |
Preference number: 6 (lower is better) Translates to: REPTVISARPSP*KSNPPDTDMPK Trigger: CTTCGGCATGTCTGTGTCCGGTGGGTTAGATTTCAATGGCGATGGCCTTGCCGATATCACAGTTGGCTCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | CACCATTGTGGTTCCCGACCAATGTCACTCCCTGGTACCTGCCCTTaGGCATACAGATGTGCTCCACTGGCTGGCAAGCAATTTCATCTG | + |
Preference number: 6 (lower is better) Translates to: HHCGSRPMSLPGTCP*AYRCAPLAGKQFHL Trigger: CAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGTCGGGAACCACAATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | GATGCTCTGAACTTTGGCAAGGGAGGCGTTAATGTCCCGGCTCTCTaGAAGATCAAACTCAGTCTGGATCACGGCCCCATACTGCACCAG | + |
Preference number: 6 (lower is better) Translates to: DALNFGKGGVNVPAL*KIKLSLDHGPILHQ Trigger: CTGGTGCAGTATGGGGCCGTGATCCAGACTGAGTTTGATCTTCAAGAGAGCCGGGACATTAACGCCTCCCTTGCCAAAGTTCAGAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | ACTTTGGCAAGGGAGGCGTTAATGTCCCGGCTCTCTTaGAGATCAAACTCAGTCTGGATCACGGCCCCATAC | + |
Preference number: 6 (lower is better) Translates to: TLAREALMSRLS*RSNSVWITAPY Trigger: GTATGGGGCCGTGATCCAGACTGAGTTTGATCTTCAAGAGAGCCGGGACATTAACGCCTCCCTTGCCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | GTGTTGTTGCAGCTTGCTCAGCAGCCCATCCAGAGCTaGGTAGTTGGTCACCTTGAAAGTGTGGGCCTCTTT | + |
Preference number: 6 (lower is better) Translates to: VLLQLAQQPIQS*VVGHLESVGLF Trigger: AAAGAGGCCCACACTTTCAAGGTGACCAACTACTCAGCTCTGGATGGGCTGCTGAGCAAGCTGCAACAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | AGAAGCAGTCCTCCTCACAAAGCTCCTCTGTGGAGATaGGCCAGAAGTGTTCACACAGAAAGGACCCTCCGT | + |
Preference number: 6 (lower is better) Translates to: RSSPPHKAPLWR*ARSVHTERTLR Trigger: ACGGAGGGTCCTTTCTGTGTGAACACTTCTGGCTCATCTCCACAGAGGAGCTTTGTGAGGAGGACTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | GCATCACCCACCCCAATGGCAAAGCGCACAACACCCTaGATCTTTGGGGAGTTGATGACAGTCGTAAGATTG | + |
Preference number: 6 (lower is better) Translates to: ASPTPMAKRTTP*IFGELMTVVRL Trigger: CAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | CCCCTTGTCCAGGATCTGGGCACTGAAACCAGTCTGTaGGAGTTGATATTGAAGGGCATCTCCAACTGTACC | + |
Preference number: 6 (lower is better) Translates to: PLVQDLGTETSL*ELILKGISNCT Trigger: GGTACAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | GCTGGGAGATGTTGGTGGTCAGCTGGATCTCAGCGATaGAGAACACTTTGTTCTTGCAGTCCTTCTCGTAGG | + |
Preference number: 6 (lower is better) Translates to: AGRCWWSAGSQR*RTLCSCSPSRR Trigger: CCTACGAGAAGGACTGCAAGAACAAAGTGTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | CACCCCAATGGCAAAGCGCACAACACCCTGCATCTTTaGGGAGTTGATGACAGTCGTAAGATTGAGAGGGTC | + |
Preference number: 6 (lower is better) Translates to: HPNGKAHNTLHL*GVDDSRKIERV Trigger: GACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTTTGCCATTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | CAAGGGAGTAACCTAGGTAGCTGTACTGTACAGTCCTaGAGTCCTCCTTGGCTGTCTGGTTTAGGAAGCAGC | + |
Preference number: 6 (lower is better) Translates to: QGSNLGSCTVQS*SPPWLSGLGSS Trigger: GCTGCTTCCTAAACCAGACAGCCAAGGAGGACTCCAGGACTGTACAGTACAGCTACCTAGGTTACTCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | ACCACCAGTTCCTGCTGGGAGATGTTGGTGGTCAGCTaGATCTCAGCGATGCAGAACACTTTGTTCTTGCAG | + |
Preference number: 6 (lower is better) Translates to: TTSSCWEMLVVS*ISAMQNTLFLQ Trigger: CTGCAAGAACAAAGTGTTCTGCATCGCTGAGATCCAGCTGACCACCAACATCTCCCAGCAGGAACTGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | TCCTTTGCTTCTACAGTAGTCACCAGAGTCCACATGTaGTCCTGGATCCAGGAACCCTTCGAGGTCAGAGAA | + |
Preference number: 6 (lower is better) Translates to: SFASTVVTRVHM*SWIQEPFEVRE Trigger: TTCTCTGACCTCGAAGGGTTCCTGGATCCAGGAGCACATGTGGACTCTGGTGACTACTGTAGAAGCAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | GAGCCACGGCTTGGAATGAAGATATTGTCTAGGACATaGTGCATGGCTGAGGCGGTCTTAGTGACTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: EPRLGMKILSRT*CMAEAVLVTSF Trigger: GAAGGAAGTCACTAAGACCGCCTCAGCCATGCAGCATGTCCTAGACAATATCTTCATTCCAAGCCGTGGCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | AAGCATCCTGCTCAGGCACCTGGTACACATAGACTCTaGCTTCTTCTCCACGGATGTGGTAAAATGGAGCAG | + |
Preference number: 6 (lower is better) Translates to: KHPAQAPGTHRL*LLLHGCGKMEQ Trigger: CTGCTCCATTTTACCACATCCGTGGAGAAGAAGGCAGAGTCTATGTGTACCAGGTGCCTGAGCAGGATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | AAAACACCATTGTGGTTCCCGACCAATGTCACTCCCTaGTACCTGCCCTTTGGCATACAGATGTGCTCCACT | + |
Preference number: 6 (lower is better) Translates to: KTPLWFPTNVTP*YLPFGIQMCST Trigger: AGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAGGGAGTGACATTGGTCGGGAACCACAATGGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | AACTTTGGCAAGGGAGGCGTTAATGTCCCGGCTCTCTaGAAGATCAAACTCAGTCTGGATCACGGCCCCATA | + |
Preference number: 6 (lower is better) Translates to: NFGKGGVNVPAL*KIKLSLDHGPI Trigger: TATGGGGCCGTGATCCAGACTGAGTTTGATCTTCAAGAGAGCCGGGACATTAACGCCTCCCTTGCCAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | CTGCCCCTTGTCCAGGATCTGGGCACTGAAACCAGTCTGTGCGAGTaGATATTGAAGGGCATCTCCAACTGTACCTTCCATATGAACGAT | + |
Preference number: 6 (lower is better) Translates to: LPLVQDLGTETSLCE*ILKGISNCTFHMND Trigger: ATCGTTCATATGGAAGGTACAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | TACCTGCCCTTTGGCATACAGATGTGCTCCACTGGCTaGCAAGCAATTTCATCTGGACTGATGGATATAGCG | + |
Preference number: 6 (lower is better) Translates to: YLPFGIQMCSTG*QAISSGLMDIA Trigger: CGCTATATCCATCAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | CTGGTACCTGCCCTTTGGCATACAGATGTGCTCCACTaGCTGGCAAGCAATTTCATCTGGACTGATGGATAT | + |
Preference number: 6 (lower is better) Translates to: LVPALWHTDVLH*LASNFIWTDGY Trigger: ATATCCATCAGTCCAGATGAAATTGCTTGCCAGCCAGTGGAGCACATCTGTATGCCAAAGGGCAGGTACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | GGCAGTTCAGATACATCTCTTAGTAACTGCTTAGTGTaGCCCACGGAGATCTCTGCGGCCACGGTTACATTT | + |
Preference number: 6 (lower is better) Translates to: GSSDTSLSNCLV*PTEISAATVTF Trigger: AAATGTAACCGTGGCCGCAGAGATCTCCGTGGGCCACACTAAGCAGTTACTAAGAGATGTATCTGAACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | ATGGCAAAGCGCACAACACCCTGCATCTTTGGGGAGTaGATGACAGTCGTAAGATTGAGAGGGTCCCCAAAT | + |
Preference number: 6 (lower is better) Translates to: MAKRTTPCIFGE*MTVVRLRGSPN Trigger: ATTTGGGGACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCGCTTTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | GTCCAGGATCTGGGCACTGAAACCAGTCTGTGCGAGTaGATATTGAAGGGCATCTCCAACTGTACCTTCCAT | + |
Preference number: 6 (lower is better) Translates to: VQDLGTETSLCE*ILKGISNCTFH Trigger: ATGGAAGGTACAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | CGCACAACACCCTGCATCTTTGGGGAGTTGATGACAGTCGTAAGATaGAGAGGGTCCCCAAATATGTCACCATCAGTAAGTACCACCATG | + |
Preference number: 6 (lower is better) Translates to: RTTPCIFGELMTVVR*RGSPNMSPSVSTTM Trigger: CATGGTGGTACTTACTGATGGTGACATATTTGGGGACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGGTGTTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | GGTCTGGAAAGAACTGCAATGAAGGCATGTCTGAATTaGAGGCTGCGTGTCTCTCTGGCCAAAGACTTCTCA | + |
Preference number: 6 (lower is better) Translates to: GLERTAMKACLN*RLRVSLAKDFS Trigger: TGAGAAGTCTTTGGCCAGAGAGACACGCAGCCTTCAATTCAGACATGCCTTCATTGCAGTTCTTTCCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | CTTGTCCAGGATCTGGGCACTGAAACCAGTCTGTGCGAGTTGATATaGAAGGGCATCTCCAACTGTACCTTCCATATGAACGATGTGTTG | + |
Preference number: 6 (lower is better) Translates to: LVQDLGTETSLCELI*KGISNCTFHMNDVL Trigger: CAACACATCGTTCATATGGAAGGTACAGTTGGAGATGCCCTTCAATATCAACTCGCACAGACTGGTTTCAGTGCCCAGATCCTGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | GTCAGAAGGGCTTTGGCTTGTGTTCATGTACATCACTaGGGGTCTGGAAAGAACTGCAATGAAGGCATGTCT | + |
Preference number: 6 (lower is better) Translates to: VRRALACVHVHH*GSGKNCNEGMS Trigger: AGACATGCCTTCATTGCAGTTCTTTCCAGACCCTCAGTGATGTACATGAACACAAGCCAAAGCCCTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | CAGCTTCAGTTCTCTGTAAGTGTTGTTATTCTTGAATaGATCACCCACCCCAATGGCAAAGCGCACAACACC | + |
Preference number: 6 (lower is better) Translates to: QLQFSVSVVILE*ITHPNGKAHNT Trigger: GGTGTTGTGCGCTTTGCCATTGGGGTGGGTGATGCATTCAAGAATAACAACACTTACAGAGAACTGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | CCCTGCATCTTTGGGGAGTTGATGACAGTCGTAAGATaGAGAGGGTCCCCAAATATGTCACCATCAGTAAGT | + |
Preference number: 6 (lower is better) Translates to: PCIFGELMTVVR*RGSPNMSPSVS Trigger: ACTTACTGATGGTGACATATTTGGGGACCCTCTCAATCTTACGACTGTCATCAACTCCCCAAAGATGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | ACCAGGACAGAAGCAACTGGCTTGGGGTCATCACACTaGACATCTGGAGATACTGGCTTTTGTATCTTCTTA | + |
Preference number: 6 (lower is better) Translates to: TRTEATGLGSSH*TSGDTGFCIFL Trigger: TAAGAAGATACAAAAGCCAGTATCTCCAGATGTTCAGTGTGATGACCCCAAGCCAGTTGCTTCTGTCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CCA 72 bp | TTCCTCATCATGGTAGAGATGAAATTTTTGGCCTTCTaGAAGTCTGAGGGTTCAATGCTTCCTGAGCCATCC | + |
Preference number: 6 (lower is better) Translates to: FLIMVEMKFLAF*KSEGSMLPEPS Trigger: GGATGGCTCAGGAAGCATTGAACCCTCAGACTTCCAGAAGGCCAAAAATTTCATCTCTACCATGATGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | CAATCAGCTTCAGTTCTCTGTAAGTGTTGTTATTCTTaGATGCATCACCCACCCCAATGGCAAAGCGCACAA | + |
Preference number: 6 (lower is better) Translates to: QSASVLCKCCYS*MHHPPQWQSAQ Trigger: TTGTGCGCTTTGCCATTGGGGTGGGTGATGCATTCAAGAATAACAACACTTACAGAGAACTGAAGCTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | GAACATCTCTCTAAGGCCTGGCTCAGAAGCTACGCCTaGAGAGTCAACTTCAAAACACAGTTTTACATCCAT | + |
Preference number: 6 (lower is better) Translates to: EHLSKAWLRSYA*RVNFKTQFYIH Trigger: ATGGATGTAAAACTGTGTTTTGAAGTTGACTCTTCAGGCGTAGCTTCTGAGCCAGGCCTTAGAGAGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | TCTGCTGTCCTATTTGGAAAGACACTCTCCTCTAGCTaGCAAGTTACTGAGACATTCACAGATGATCTCTTG | + |
Preference number: 6 (lower is better) Translates to: SAVLFGKTLSSS*QVTETFTDDLL Trigger: CAAGAGATCATCTGTGAATGTCTCAGTAACTTGGCAGCTAGAGGAGAGTGTCTTTCCAAATAGGACAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS GCA 72 bp | TTTTCTTTATTAGATGTGATAGCACAGACCACTGAATaGCATTCTTTTACATGCTGCACAGGATCGCTTCCA | + |
Preference number: 6 (lower is better) Translates to: FSLLDVIAQTTE*HSFTCCTGSLP Trigger: TGGAAGCGATCCTGTGCAGCATGTAAAAGAATGGCATTCAGTGGTCTGTGCTATCACATCTAATAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS TCA 72 bp | GATTCTTCACTCTTACAATCTGGAAATCTTGTAATTTaGTGGGGACACAAATTTGCAACTGGAATACAGCTC | + |
Preference number: 6 (lower is better) Translates to: DSSLLQSGNLVI*WGHKFATGIQL Trigger: GAGCTGTATTCCAGTTGCAAATTTGTGTCCCCATCAAATTACAAGATTTCCAGATTGTAAGAGTGAAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 90 bp | GTCTTTGTCAGATTCTTCACTCTTACAATCTGGAAATCTTGTAATTaGATGGGGACACAAATTTGCAACTGGAATACAGCTCCAAAAAGA | + |
Preference number: 6 (lower is better) Translates to: VFVRFFTLTIWKSCN*MGTQICNWNTAPKR Trigger: TCTTTTTGGAGCTGTATTCCAGTTGCAAATTTGTGTCCCCATCAAATTACAAGATTTCCAGATTGTAAGAGTGAAGAATCTGACAAAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |
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CDS CAA 72 bp | AGATTCTTCACTCTTACAATCTGGAAATCTTGTAATTaGATGGGGACACAAATTTGCAACTGGAATACAGCT | + |
Preference number: 6 (lower is better) Translates to: RFFTLTIWKSCN*MGTQICNWNTA Trigger: AGCTGTATTCCAGTTGCAAATTTGTGTCCCCATCAAATTACAAGATTTCCAGATTGTAAGAGTGAAGAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006101.4 |