RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025348

Ensembl transcript IDs: ENSMUST00000099112.4, ENSMUST00000218290.2, ENSMUST00000219427.2

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCAGTCGGCAGCCAAGATGGGGTGTGCGTCGGAGCCCTCCCACTaGGAGTTGCCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: CQSAAKMGCASEPSH*ELPQLLLWMVPVFS
Trigger: GGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCTTGGCTGCCGACTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR CCA 90 bp TGTGCGTCGGAGCCCTCCCACTGGGAGTTGCCCCAGTTACTCCTCTaGATGGTGCCTGTCTTCTCCTCCTTGAACTGCTGTCGGTCTTCC +
Preference number: 1 (lower is better)
Translates to: CASEPSHWELPQLLL*MVPVFSSLNCCRSS
Trigger: GGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR TCA 90 bp CACAGTAAGGCCAGAGGGCAGGGGAGACTTGGGAGTAAAGGGCCCTaGGACAGTGACACAGTCTCTTCCCTGACCCTCTGTCTAAGGCAC +
Preference number: 1 (lower is better)
Translates to: HSKARGQGRLGSKGP*DSDTVSSLTLCLRH
Trigger: GTGCCTTAGACAGAGGGTCAGGGAAGAGACTGTGTCACTGTCTCAGGGCCCTTTACTCCCAAGTCTCCCCTGCCCTCTGGCCTTACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR CAA 90 bp TCGGCAGCCAAGATGGGGTGTGCGTCGGAGCCCTCCCACTGGGAGTaGCCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SAAKMGCASEPSHWE*PQLLLWMVPVFSSL
Trigger: CAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCTTGGCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR-3UTR CCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGGGTGGTTCTCCTGGTaGGAGAAAGATCTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWGWFSW*EKDLCS
Trigger: GGAGCACAGATCTTTCTCCCACCAGGAGAACCACCC...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR GCA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPFSSLN*CRSSRG
Trigger: CCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR-3UTR GCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTGTATCAGGACATGCCTaGCCTTCCAGCCATGCCCCC +
Preference number: 2 (lower is better)
Translates to: SPGGRKICAPEKAEPAISVSGHA*PSSHAP
Trigger: GGGGGCATGGCTGGAAGGGCAGGCATGTCCTGATAC...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR GCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAACCCTGTATCAGGACATaGCTGCCCTTCCAGCCATGC +
Preference number: 2 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKPCIRT*LPFQPC
Trigger: GCATGGCTGGAAGGGCAGGCATGTCCTGATACAGGG...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR GCA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGGGACCCAGCTCAGGATaGCAGTCGGCAGCCAAGATG +
Preference number: 2 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQGPSSG*QSAAKM
Trigger: CATCTTGGCTGCCGACTGGCATCCTGAGCTGGGTCC...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR-3UTR CCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATAGAGGGGTGGTTCTCCTaGTGGGAGAAAGATCTGTGC +
Preference number: 2 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIEGWFS*WEKDLC
Trigger: GCACAGATCTTTCTCCCACCAGGAGAACCACCCCTC...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR GCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACCCCTGTATCAGGACATaGCTGCCCTTCCAGCCATGC +
Preference number: 2 (lower is better)
Translates to: ICAPEKAEPAISQRDASNPCIRT*LPFQPC
Trigger: GCATGGCTGGAAGGGCAGGCATGTCCTGATACAGGG...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR CCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTGGGAAGATGGAGGGGTaGTTCTCCTGGTGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: SPGGRKICAPEKAEPAISGKMEG*FSWWEK
Trigger: TTTCTCCCACCAGGAGAACCACCCCTCCATCTTCCC...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR TCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTCTGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSLSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAG...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATAGTTACTCCTCTGGATaGTGCCTGTCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYSYSSG*CLSSPP
Trigger: AGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACT...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR CCA 72 bp GCAGCCAAGATGGGGTGTGCGTCGGAGCCCTCCCACTaGGAGTTGCCCCAGTTACTCCTCTGGATGGTGCCT +
Preference number: 3 (lower is better)
Translates to: AAKMGCASEPSH*ELPQLLLWMVP
Trigger: AGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCTTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR GCA 72 bp AGATGGGGTGTGCGTCGGAGCCCTCCCACTGGGAGTTaGCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCT +
Preference number: 3 (lower is better)
Translates to: RWGVRRSPPTGS*PSYSSGWCLSS
Trigger: AGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR TCA 72 bp GCCAGAGGGCAGGGGAGACTTGGGAGTAAAGGGCCCTaGGACAGTGACACAGTCTCTTCCCTGACCCTCTGT +
Preference number: 3 (lower is better)
Translates to: ARGQGRLGSKGP*DSDTVSSLTLC
Trigger: ACAGAGGGTCAGGGAAGAGACTGTGTCACTGTCTCAGGGCCCTTTACTCCCAAGTCTCCCCTGCCCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR CCA 72 bp GAGCCCTCCCACTGGGAGTTGCCCCAGTTACTCCTCTaGATGGTGCCTGTCTTCTCCTCCTTGAACTGCTGT +
Preference number: 3 (lower is better)
Translates to: EPSHWELPQLLL*MVPVFSSLNCC
Trigger: ACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR-3UTR CAA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTTCCCAAGGAGCCATCTaGGGAAAAGGGCGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRASQGAI*GKGRKE
Trigger: TTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGA...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR CCA 72 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTaGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: NLLHYLHPKEPS*EKGGRNPRAGL
Trigger: AAGCCCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR CAA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAATCCCAAGGAGCCATCTaGGGAAAAGGGCGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKSQGAI*GKGRKE
Trigger: TTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGA...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
3UTR-3UTR CAA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCCTCGTCTCACAGCATaGTATGGGGAAGATGGAGGG +
Preference number: 3 (lower is better)
Translates to: SPGGRKICAPEKAEPAISPRLTA*YGEDGG
Trigger: CCCTCCATCTTCCCCATACAATGCTGTGAGACGAGG...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp GGCAGCCAAGATGGGGTGTGCGTCGGAGCCCTCCCACTGGGAGTTGCCCCAGTTGGTGCTTCGCCCGCTTaGAGAATCCCAGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSQDGVCVGALPLGVAPVGASPA*RIPAHS
Trigger: ACTGTGGGCTGGGATTCTTCAAGCGGGCGAAGCACC...AACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCTTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp CCATCAGGACCCAGCTCAGGATGCCAGTCGGCAGCCAAGATGGGGTGTGCGTCGCAGCCCAGCCAGCACTaGCAGGAGGATGACCCACCA +
Preference number: 4 (lower is better)
Translates to: PSGPSSGCQSAAKMGCASQPSQH*QEDDPP
Trigger: TGGTGGGTCATCCTCCTGGCAGTGCTGGCTGGGCTG...CGACGCACACCCCATCTTGGCTGCCGACTGGCATCCTGAGCTGGGTCCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
3UTR CAA 72 bp CTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCTaGGGACAGCAGATGTTAGGCAGTGGCTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: LGKRAEGTHGLG*GQQMLGSGWHR
Trigger: CCGGTGCCAGCCACTGCCTAACATCTGCTGTCCCAAGCCCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTTCTCTGGAGGCTCCTaGGGCTCCGGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGFSGGS*GSGCPS
Trigger: GCTGGGGCAGCCGGAGCCGCAGGAGCCTCCAGAGAA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CCATCAGGACCCAGCTCAGGATGCCAGTCGGCAGCCAAGATGGGGTGTGCGTCGACGGTGGCCTCGGGGTaGTTCGCCCGCTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PSGPSSGCQSAAKMGCASTVASG*FARLKN
Trigger: ATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGT...CGACGCACACCCCATCTTGGCTGCCGACTGGCATCCTGAGCTGGGTCCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTTGCCCCCTGGCCCCTaGCTCCGGACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTCCGGAGCCAGGGGCCAGGGGGCAA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTCATCCCCATCTGCCTaGGGCCGGGCAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGSSPSA*GRAGSE
Trigger: CTCTGACCCTGCCCGGCCTCAGGCAGATGGGGATGA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCACTTGGCCGTGCCCTaGGCGCAGTCCAGAGTCACG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGHLAVP*AQSRVT
Trigger: CGTGACTCTGGACTGCGCCCAGGGCACGGCCAAGTG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CAGCTCAGGATGCCAGTCGGCAGCCAAGATGGGGTGTGCGTCGGAGCCCTCCCACCACAACCACGGCCATaGGGTCCAAGTACACCATCA +
Preference number: 4 (lower is better)
Translates to: QLRMPVGSQDGVCVGALPPQPRP*GPSTPS
Trigger: TGATGGTGTACTTGGACCCCATGGCCGTGGTTGTGG...TGGGAGGGCTCCGACGCACACCCCATCTTGGCTGCCGACTGGCATCCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGTGCTGGGCTGGTaGGCATTGAGGATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGWVLGW*ALRMGA
Trigger: GGCTCCCATCCTCAATGCTCACCAGCCCAGCACCCA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTTCCTGCGGCTCCGGCTaGCCCAGCTCTCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISSCGSG*PSSRRL
Trigger: GAGGCGGCGAGAGCTGGGGCAGCCGGAGCCGCAGGA...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGACTCCTCCAGAAAGGTaGTGTTCCAGAGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWTPPER*CSRGGP
Trigger: GGGGCCGCCTCTGGAACAGCACCTTTCTGGAGGAGT...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGACGGTGGCCTCGGGGTaGTTCGCCCGCTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWTVASG*FARLKN
Trigger: ATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGT...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGCAGAAACGTCACACGTaGAACCTGGCCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWQKRHT*NLAPEP
Trigger: AGGCTCCGGGGCCAGGTTCCACGTGTGACGTTTCTG...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp ACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCACTTGGCCGTGCCCTaGGCGCAGTCCAGAGTCACG +
Preference number: 4 (lower is better)
Translates to: TISIPRSHLGKRAEGTHGHLAVP*AQSRVT
Trigger: CGTGACTCTGGACTGCGCCCAGGGCACGGCCAAGTG...CCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
3UTR CAA 72 bp AAGATGGGGTGTGCGTCGGAGCCCTCCCACTGGGAGTaGCCCCAGTTACTCCTCTGGATGGTGCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KMGCASEPSHWE*PQLLLWMVPVF
Trigger: GAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTCCCAGTGGGAGGGCTCCGACGCACACCCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCACCTGTGAAGGTTTaGCAACCACCCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWAPVKV*QPPQGC
Trigger: GCAGCCTTGGGGTGGTTGTCAAACCTTCACAGGTGC...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCACGGAGGACTGATGCCTaGGGTCATCCAGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPRRTDA*GHPGLG
Trigger: GCCGAGGCCTGGATGACCTCAGGCATCAGTCCTCCG...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGCCTCCGGTGCGGTTTaGCTGCTGTCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRAASGAV*LLSRKS
Trigger: GCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGC...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGTCCTGCGGCTCCGGCTaGCCCAGCTCTCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQSCGSG*PSSRRL
Trigger: GAGGCGGCGAGAGCTGGGGCAGCCGGAGCCGCAGGA...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGCTCAGCAGAGGACACTaGCCACCAGGATGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWLSRGH*PPGCAR
Trigger: CCTAGCACATCCTGGTGGCCAGTGTCCTCTGCTGAG...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATACGGAGGACTGATGCCTaGGGTCATCCAGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIRRTDA*GHPGLG
Trigger: GCCGAGGCCTGGATGACCTCAGGCATCAGTCCTCCG...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCTCATCCCCATCTGCCTaGGGCCGGGCAGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLSSPSA*GRAGSE
Trigger: CTCTGACCCTGCCCGGCCTCAGGCAGATGGGGATGA...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCACCGGTGCGGTTTGCCTaGTGTCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGG...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCAGCCTCCGGTGCGGTTTaGCTGCTGTCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPASGAV*LLSRKS
Trigger: GCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGC...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCTTAGAAGGTGGCAGCTGTaGCCTGCTGACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: HPKEPSWEKGGRNPRAGLRRWQL*PADRTQ
Trigger: TTGGGTTCTGTCAGCAGGGCACAGCTGCCACCTTCT...AAGCCCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACGGAAGAGCCAGGGCCTaGGGAGCGCCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNGRARA*GAPTSS
Trigger: GCTGCTGGTGGGCGCTCCCCAGGCCCTGGCTCTTCC...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCGCACCTGTGAAGGTTTaGCAACCACCCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAAPVKV*QPPQGC
Trigger: GCAGCCTTGGGGTGGTTGTCAAACCTTCACAGGTGC...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGAACAGGTCTGGCCCTaGACAGAGCAGCGGTATCAG +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRAEQVWP*TEQRYQ
Trigger: CTGATACCGCTGCTCTGTTCAGGGCCAGACCTGTTC...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp ACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGGGGAGTGGCCACCCCTaGAATGGACAGTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: TISIPRSHLGKRAEGTHGGSGHP*NGQWQF
Trigger: GAATTGCCACTGTCCATTTCAGGGGTGGCCACTCCC...CCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCGGGAGTGGCCACCCCTaGAATGGACAGTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAGSGHP*NGQWQF
Trigger: GAATTGCCACTGTCCATTTCAGGGGTGGCCACTCCC...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATAGCACTGCCAGGAGGATaGCCCACCAGGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIALPGG*PTRGLL
Trigger: AAGGAGTCCCCTGGTGGGTCATCCTCCTGGCAGTGC...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTACTCGGTCATGTTGGTaGTTCAGCCACACGGTGCCG +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRATRSCW*FSHTVP
Trigger: CGGCACCGTGTGGCTGAAGCACCAACATGACCGAGT...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGTTCTCTGGAGGCTCCTaGGGCTCCGGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWFSGGS*GSGCPS
Trigger: GCTGGGGCAGCCGGAGCCGCAGGAGCCTCCAGAGAA...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTGTCACACGTGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCACGTGTGAC...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATGTCACACGTGGAACCTaGCCCCGGAGCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYVTRGT*PRSLRS
Trigger: AGACCGGAGGCTCCGGGGCCAGGTTCCACGTGTGAC...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCGAGAGGCGCTGTCATTaGACAGGCAGAGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAERRCH*TGRAAS
Trigger: AGAAGCCGCTCTGCCTGTCCAATGACAGCGCCTCTC...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCCATTGGCGATCTCGTaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCCCACGAGATCGCCAATGG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCTGTCCACATCCAGCTaGAGGATGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGLSTSS*RMLGLG
Trigger: CCCAAGACCCAACATCCTCCAGCTGGATGTGGACAG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCCTCAGCAGAGGACACTaGCCACCAGGATGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPLSRGH*PPGCAR
Trigger: CCTAGCACATCCTGGTGGCCAGTGTCCTCTGCTGAG...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGGTACTGGGGCACGGTaGCCTCGGGGTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLGTGAR*PRGASP
Trigger: GGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACC...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATTTCACTGCGTGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAA...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGACCCCCAGCCTCCATaGCCGAGGGCTGCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLDPQPP*PRAARP
Trigger: TGGCCGTGCAGCCCTCGGCCATGGAGGCTGGGGGTC...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCGCAGCTGTGCCCTGCTaGCAGAACCCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPAAVPC*QNPNCS
Trigger: TGAACAGTTTGGGTTCTGTCAGCAGGGCACAGCTGC...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCGAGAGGCTGGGAGAGTaGCCAAGAGCTGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAERLGE*PRAVLH
Trigger: ATGAAGCACAGCTCTTGGTCACTCTCCCAGCCTCTC...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGGCACTGCCAGGAGGATaGCCCACCAGGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRALPGG*PTRGLL
Trigger: AAGGAGTCCCCTGGTGGGTCATCCTCCTGGCAGTGC...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCCTGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPALSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAG...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTAGCATCATCCCCATCTaGCTGAGGCCGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISSIIPI*LRPGRV
Trigger: GACCCTGCCCGGCCTCAGGCAGATGGGGATGATGCT...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGAGTGACCAAGAGCTGTaGTTCATGAGCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWSDQEL*FMSIIP
Trigger: GGGGATGATGCTCATGAAGCACAGCTCTTGGTCACT...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAAACAGATCCCTCTCTTaGCAGGCCCCTGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKNRSLS*QAPVRP
Trigger: AGGGCGGACAGGGGCCTGGCAAGAGAGGGATCTGTT...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAACCGAGGGATCTTCACTaGGTGGTACTGGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKPRDLH*VVLGHG
Trigger: ACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGG...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAFSSLN*CRSSRG
Trigger: CCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTATTGCCCCCTGGCCCCTaGCTCCGGACACTGACTCCC +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLLPPGP*LRTLTP
Trigger: GGGAGTCAGTGTCCGGAGCCAGGGGCCAGGGGGCAA...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCACCAGCTCATCACGGATaGCCAGGTCCTGGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPPAHHG*PGPGLA
Trigger: TGCTAAGCCAGGACCTGGCCATCCGTGATGAGCTGG...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCTGTCAGGGGAGAAGGTaGCAGCTGTGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLCQGRR*QLCPAD
Trigger: GTCAGCAGGGCACAGCTGCCACCTTCTCCCCTGACA...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAATGTCAGGGGAGAAGGTaGCAGCTGTGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKCQGRR*QLCPAD
Trigger: GTCAGCAGGGCACAGCTGCCACCTTCTCCCCTGACA...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTTTTGTGGTTGGCACGTaGGGCCCCTGCCACAAAACT +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRAFVVGT*GPCHKT
Trigger: AGTTTTGTGGCAGGGGCCCCACGTGCCAACCACAAA...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCTTTGTGGTTGGCACGTaGGGCCCCTGCCACAAAACT +
Preference number: 4 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPFVVGT*GPCHKT
Trigger: AGTTTTGTGGCAGGGGCCCCACGTGCCAACCACAAA...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCCTGTCCACATCCAGCTaGAGGATGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPALSTSS*RMLGLG
Trigger: CCCAAGACCCAACATCCTCCAGCTGGATGTGGACAG...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGGGGATCTTCACTGCGTaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCC...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCCCCCAGTTACTCCTCTaGATGGTGCCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAPQLLL*MVPVFS
Trigger: GGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGG...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCCAGCTGGTCAGGGTCTaGGCTATCAATGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAQLVRV*AINVGH
Trigger: GTGACCAACATTGATAGCTCAGACCCTGACCAGCTG...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS-3UTR TCA 90 bp ACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGATCAGTCACAGCCAGTaGGTAGCCAAAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TISIPRSHLGKRAEGTHGISHSQ*VAKARG
Trigger: ACCTCTGGCTTTGGCTACTCACTGGCTGTGACTGAT...CCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATTGGGCTGGTGAGCATTaGGGATGGGAGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYWAGEH*GWEPQW
Trigger: CCACTGTGGCTCCCATCCTCAATGCTCACCAGCCCA...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATCAGTTCCAGGCCTATaGACGGCTGCCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPSVPGL*TAAHSM
Trigger: CATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGA...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCCAGAGCCCAGAGTATTaGGAGACTGGCCTTGATTGG +
Preference number: 4 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPQSPEY*ETGLDW
Trigger: CCAATCAAGGCCAGTCTCTCAATACTCTGGGCTCTG...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAATGTAGAGTGGGCAGCTaGACACCACACACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKCRVGS*TPHTWP
Trigger: CGGCCAAGTGTGTGGTGTTCAGCTGCCCACTCTACA...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACGCACTGCCAGGAGGATaGCCCACCAGGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNALPGG*PTRGLL
Trigger: AAGGAGTCCCCTGGTGGGTCATCCTCCTGGCAGTGC...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCGGTGCTTCGCCCGCTTaGAGAATCCCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLGASPA*RIPAST
Trigger: TGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACC...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGCCGGTGCGGTTTGCCTaGTGTCCAGGAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQPVRFA*CPGRAR
Trigger: CCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGG...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGACAAAGAGGCCTCCGGTaGGGTTTGCCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGQRGLR*GLPAVQ
Trigger: CTGGACAGCAGGCAAACCGCACCGGAGGCCTCTTTG...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTTCCTTGCTCTCCTTCTaGACGTTAGCTCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRASLLSF*TLAPLS
Trigger: TGACAGGGGAGCTAACGTGCAGAAGGAGAGCAAGGA...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGAGAGGAGAGATATCTaGCCAATGGCCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRAERRDI*PMATLV
Trigger: AACCAGGGTGGCCATTGGGCAGATATCTCTCCTCTC...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCTTTCTTCACCGCAGCCTTaGTTCAGAAAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: HPKEPSWEKGGRNPRAGLSSPQP*FRKWIS
Trigger: TGAGATCCACTTTCTGAAGCAAGGCTGCGGTGAAGA...AAGCCCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATACCAGAGAAGAAGAGTTaGTGGGGAGTGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIPEKKS*WGVATP
Trigger: AGGGGTGGCCACTCCCCAGCAACTCTTCTTCTCTGG...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTCCACACACTTGGCCGTaGCCTGGGCGCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAPHTWP*PGRSPE
Trigger: CTCTGGACTGCGCCCAGGGCACGGCCAAGTGTGTGG...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTCCACACACTTGGCCGTaGCCTGGGCGCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSPHTWP*PGRSPE
Trigger: CTCTGGACTGCGCCCAGGGCACGGCCAAGTGTGTGG...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAACTCCTCCAGAAAGGTaGTGTTCCAGAGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGTPPER*CSRGGP
Trigger: GGGGCCGCCTCTGGAACAGCACCTTTCTGGAGGAGT...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACCAGCCCAGCCAGCACTaGCAGGAGGATGACCCACCA +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNQPSQH*QEDDPP
Trigger: TGGTGGGTCATCCTCCTGGCAGTGCTGGCTGGGCTG...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACCAGCCCAGCCAGCACTaGCAGGAGGATGACCCACCA +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHQPSQH*QEDDPP
Trigger: TGGTGGGTCATCCTCCTGGCAGTGCTGGCTGGGCTG...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGACCGAGGGATCTTCACTaGGTGGTACTGGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGPRDLH*VVLGHG
Trigger: ACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGG...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATGGACCCAGCTCAGGATaGCAGTCGGCAGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYGPSSG*QSAAKM
Trigger: CATCTTGGCTGCCGACTGGCATCCTGAGCTGGGTCC...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTCTGACTCCCAGCCATTaGTTCTCCTTGCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRALTPSH*FSLLSF
Trigger: GAAGGAGAGCAAGGAGAACCAATGGCTGGGAGTCAG...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTAACAATCTTGCCCCCTaGCCCCTGGCTCCGGACACT +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISNNLAP*PLAPDT
Trigger: AGTGTCCGGAGCCAGGGGCCAGGGGGCAAGATTGTT...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACTGTTCATGGCCCTaGGGGCGCCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGGCGCCCCCAGGGCCATGAACAGTT...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCCAGTTATAGGTTCCTaGAGCCCCAAAGACGAGGTA +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGPVIGS*SPKDEV
Trigger: TACCTCGTCTTTGGGGCTCCAGGAACCTATAACTGG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCCTTGCTTCAGAAAGTaGATCTCAGTCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGPCFRK*ISVLWV
Trigger: CACCCAGAGGACTGAGATCCACTTTCTGAAGCAAGG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATCCATGGGCAGAGCCTaGAACTCTGTGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPSMGRA*NSVSLI
Trigger: GATCAGCGACACAGAGTTCCAGGCTCTGCCCATGGA...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCACCATTGGCGATCTCGTaGGGCCACATGATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPPLAIS*GHMMLR
Trigger: CCTCAACATCATGTGGCCCCACGAGATCGCCAATGG...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGATCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWIKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAT...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTTTCACTGCGTGGTACTaGGGCACGGTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAFTAWY*GTVASG
Trigger: CCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAA...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGGGATCTTCACTGCGTaGTACTGGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDGIFTA*YWGTVA
Trigger: GGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCC...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTGGGCTGGTGAGCATTaGGGATGGGAGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATWAGEH*GWEPQW
Trigger: CCACTGTGGCTCCCATCCTCAATGCTCACCAGCCCA...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTATGGGTGCTGGGCTGGTaGGCATTGAGGATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLWVLGW*ALRMGA
Trigger: GGCTCCCATCCTCAATGCTCACCAGCCCAGCACCCA...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTAATTCAATGAAGACATaGGCCCGAACGGAGACCGGA +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRANSMKT*ARTETG
Trigger: TCCGGTCTCCGTTCGGGCTCATGTCTTCATTGAATT...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGATGTAGAGTGGGCAGCTaGACACCACACACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGCRVGS*TPHTWP
Trigger: CGGCCAAGTGTGTGGTGTTCAGCTGCCCACTCTACA...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCCTGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLLSSPP*TAVGLP
Trigger: GGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAG...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAAGCATCATCCCCATCTaGCTGAGGCCGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLSIIPI*LRPGRV
Trigger: GACCCTGCCCGGCCTCAGGCAGATGGGGATGATGCT...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATAACAGATCCCTCTCTTaGCAGGCCCCTGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDNRSLS*QAPVRP
Trigger: AGGGCGGACAGGGGCCTGGCAAGAGAGGGATCTGTT...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACGCCGCCTCCTATCCCTaGTGTCCACATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHAASYP*CPHPAG
Trigger: TCCAGCTGGATGTGGACAGCAGGGATAGGAGGCGGC...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGGCCGCCTCCTATCCCTaGTGTCCACATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQAASYP*CPHPAG
Trigger: TCCAGCTGGATGTGGACAGCAGGGATAGGAGGCGGC...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATACCAGCAGCCAGCTCTaGGGTCGGGGCTGTAATTGT +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYTSSQL*GRGCNC
Trigger: ACAATTACAGCCCCGACCCCAGAGCTGGCTGCTGGT...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGACCAGCAGCCAGCTCTaGGGTCGGGGCTGTAATTGT +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRTSSQL*GRGCNC
Trigger: ACAATTACAGCCCCGACCCCAGAGCTGGCTGCTGGT...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCACTGACTCCCAGCCATTaGTTCTCCTTGCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPLTPSH*FSLLSF
Trigger: GAAGGAGAGCAAGGAGAACCAATGGCTGGGAGTCAG...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATAACAATCTTGCCCCCTaGCCCCTGGCTCCGGACACT +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDNNLAP*PLAPDT
Trigger: AGTGTCCGGAGCCAGGGGCCAGGGGGCAAGATTGTT...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTCGGATGGCCAGGTCCTaGCTTAGCACAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATRMARS*LSTKQR
Trigger: CCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCG...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATCGGATGGCCAGGTCCTaGCTTAGCACAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDRMARS*LSTKQR
Trigger: CCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCG...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTCAGAAACGTCACACGTaGAACCTGGCCCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATQKRHT*NLAPEP
Trigger: AGGCTCCGGGGCCAGGTTCCACGTGTGACGTTTCTG...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATACAGACTCGGTCATGTTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAACATGACCGAGTCTG...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCATCAAAGCTGTAGAGTaGGCAGCTGAACACCACACA +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGIKAVE*AAEHHT
Trigger: TGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGAT...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCCTTCCCAGAATCGATaGAGAAACCAAGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGPSQNR*RNQGSC
Trigger: ACAGCTACCTTGGTTTCTCCATCGATTCTGGGAAGG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCCAATACAGCCAAACTaGTCCCAAACATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGPIQPN*SQTWNQ
Trigger: CTGATTCCATGTTTGGGATCAGTTTGGCTGTATTGG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAGGAAGCCATCTTGGTTaGGGTCCCCCAATACAGCCA +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGGSHLG*GPPIQP
Trigger: TGGCTGTATTGGGGGACCTCAACCAAGATGGCTTCC...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACACTCGGTCATGTTGGTaGTTCAGCCACACGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHTRSCW*FSHTVP
Trigger: CGGCACCGTGTGGCTGAAGCACCAACATGACCGAGT...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTACGGTGGCCTCGGGGTaGTTCGCCCGCTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLTVASG*FARLKN
Trigger: ATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGT...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACCCAGCTCATCACGGATaGCCAGGTCCTGGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHPAHHG*PGPGLA
Trigger: TGCTAAGCCAGGACCTGGCCATCCGTGATGAGCTGG...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTAACTGTTCATGGCCCTaGGGGCGCCCCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSNCSWP*GRPSQN
Trigger: GTTCTGTGAGGGGCGCCCCCAGGGCCATGAACAGTT...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTACGTTTTCCTGCAGCTaGAACACAGTATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRATFSCS*NTVSPQ
Trigger: CTGTGGAGATACTGTGTTCCAGCTGCAGGAAAACGT...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGATCCATGGGCAGAGCCTaGAACTCTGTGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGSMGRA*NSVSLI
Trigger: GATCAGCGACACAGAGTTCCAGGCTCTGCCCATGGA...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATTCCATCCAGATCCATaGGCAGAGCCTGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIFHPDP*AEPGTL
Trigger: CAGAGTTCCAGGCTCTGCCCATGGATCTGGATGGAA...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACGAGAGGCGCTGTCATTaGACAGGCAGAGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHERRCH*TGRAAS
Trigger: AGAAGCCGCTCTGCCTGTCCAATGACAGCGCCTCTC...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGGAGAAGAAGAGTTGCTaGGGAGTGGCCACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGREKKSC*GVATPE
Trigger: TTCAGGGGTGGCCACTCCCCAGCAACTCTTCTTCTC...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGCCACAACCACGGCCATaGGGTCCAAGTACACCATCA +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRPQPRP*GPSTPS
Trigger: TGATGGTGTACTTGGACCCCATGGCCGTGGTTGTGG...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTGCAGCTGTGCCCTGCTaGCAGAACCCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATAAVPC*QNPNCS
Trigger: TGAACAGTTTGGGTTCTGTCAGCAGGGCACAGCTGC...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGTATCCTTGCGCAGAATaGCCACAGCCCCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRYPCAE*PQPLCG
Trigger: ACCACAAAGGGGCTGTGGTCATTCTGCGCAAGGATA...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTATCAGTCACAGCCAGTaGGTAGCCAAAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISISHSQ*VAKARG
Trigger: ACCTCTGGCTTTGGCTACTCACTGGCTGTGACTGAT...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGGAAGCCATCTTGGTTaGGGTCCCCCAATACAGCCA +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDGSHLG*GPPIQP
Trigger: TGGCTGTATTGGGGGACCTCAACCAAGATGGCTTCC...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGAACAGGTCTGGCCCTaGACAGAGCAGCGGTATCAG +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLEQVWP*TEQRYQ
Trigger: CTGATACCGCTGCTCTGTTCAGGGCCAGACCTGTTC...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCCCGTAGCTTGTCTTTaGCGTTTTCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISPVACL*RFPAAG
Trigger: TCCAGCTGCAGGAAAACGTCAAAGACAAGCTACGGG...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTCAGTTCCAGGCCTATaGACGGCTGCCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNSVPGL*TAAHSM
Trigger: CATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGA...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGAGCTCACACTCGACATaGGAGGCGCTGTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWSSHST*EALSLD
Trigger: GTCCAATGACAGCGCCTCTCATGTCGAGTGTGAGCT...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCACAGTGGCAATTCAATaGAGACATGAGCCCGAACGG +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLTVAIQ*RHEPER
Trigger: CCGTTCGGGCTCATGTCTTCATTGAATTGCCACTGT...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTGGTGCTTCGCCCGCTTaGAGAATCCCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSGASPA*RIPAST
Trigger: TGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACC...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACAGAAGGTGGCAGCTGTaGCCTGCTGACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHRRWQL*PADRTQ
Trigger: TTGGGTTCTGTCAGCAGGGCACAGCTGCCACCTTCT...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTACCAGAGAAGAAGAGTTaGTGGGGAGTGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLPEKKS*WGVATP
Trigger: AGGGGTGGCCACTCCCCAGCAACTCTTCTTCTCTGG...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAATTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEFSSLN*CRSSRG
Trigger: CCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAA...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCCCAATGGCCACCCTaGTTCATGTACACATACACA +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKAQWPP*FMYTYT
Trigger: TGTGTATGTGTACATGAACCAGGGTGGCCATTGGGC...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAGAGAAGAAGAGTTGCTaGGGAGTGGCCACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEEKKSC*GVATPE
Trigger: TTCAGGGGTGGCCACTCCCCAGCAACTCTTCTTCTC...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACCCACAACCACGGCCATaGGGTCCAAGTACACCATCA +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNPQPRP*GPSTPS
Trigger: TGATGGTGTACTTGGACCCCATGGCCGTGGTTGTGG...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS-3UTR CCA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGCCCCAGTTACTCCTCTaGATGGTGCCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQPQLLL*MVPVFS
Trigger: GGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGG...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTCACAGAGCTCCACCCTaGCCGTGCCCTTCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAHRAPP*PCPSSY
Trigger: ATAACTGGAAGGGCACGGCCAGGGTGGAGCTCTGTG...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAACCCAGCCATCATTGTTaGGATCAGTCACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEPSHHC*DQSQPV
Trigger: CACTGGCTGTGACTGATCTCAACAATGATGGCTGGG...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTCCCAGCCATCATTGTTaGGATCAGTCACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATPSHHC*DQSQPV
Trigger: CACTGGCTGTGACTGATCTCAACAATGATGGCTGGG...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTCCCGTAGCTTGTCTTTaGCGTTTTCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATPVACL*RFPAAG
Trigger: TCCAGCTGCAGGAAAACGTCAAAGACAAGCTACGGG...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp ATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACAAGAGCTGTGCTTCATaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: ICAPEKAEPAISQRDASNKSCAS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCATGAAGCACAGCTCTT...GTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGAGCTGTGCTTCATaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEKSCAS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCATGAAGCACAGCTCTT...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTGAGAGGCTGGGAGAGTaGCCAAGAGCTGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAERLGE*PRAVLH
Trigger: ATGAAGCACAGCTCTTGGTCACTCTCCCAGCCTCTC...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTAGCTCACACTCGACATaGGAGGCGCTGTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSSSHST*EALSLD
Trigger: GTCCAATGACAGCGCCTCTCATGTCGAGTGTGAGCT...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAACAGAGCCCAGAGTATTaGGAGACTGGCCTTGATTGG +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWEQSPEY*ETGLDW
Trigger: CCAATCAAGGCCAGTCTCTCAATACTCTGGGCTCTG...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAATAGTTGGTTGGAAATaGGGAGCTTGGACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKIVGWK*GAWTVP
Trigger: CGGAACAGTCCAAGCTCCTCATTTCCAACCAACTAT...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR GCA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTTCACCGCAGCCTTaGTTCAGAAAGTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GSPGGRKICAPEKAEPAISSPQP*FRKWIS
Trigger: TGAGATCCACTTTCTGAAGCAAGGCTGCGGTGAAGA...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGCTCCCTCCTTGCGTATaGCACCCATCACATCCAGAT +
Preference number: 4 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWLPPCV*HPSHPD
Trigger: ATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAG...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGTCTGGGAAGCCATCTTaGTTGAGGTCCCCCAATACA +
Preference number: 4 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRSGKPS*LRSPNT
Trigger: TGTATTGGGGGACCTCAACCAAGATGGCTTCCCAGA...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATTCTGGGAAGCCATCTTaGTTGAGGTCCCCCAATACA +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYSGKPS*LRSPNT
Trigger: TGTATTGGGGGACCTCAACCAAGATGGCTTCCCAGA...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTCAGACTCGGTCATGTTaGTGCTTCAGCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAQTRSC*CFSHTV
Trigger: CACCGTGTGGCTGAAGCACCAACATGACCGAGTCTG...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTTCCATCCAGATCCATaGGCAGAGCCTGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATFHPDP*AEPGTL
Trigger: CAGAGTTCCAGGCTCTGCCCATGGATCTGGATGGAA...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTAGTTACTCCTCTGGATaGTGCCTGTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPGGRKICAPEKAEPAISSYSSG*CLSSPP
Trigger: AGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACT...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTTATCCTTGCGCAGAATaGCCACAGCCCCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAYPCAE*PQPLCG
Trigger: ACCACAAAGGGGCTGTGGTCATTCTGCGCAAGGATA...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCCCAATACAGCCAAACTaGTCCCAAACATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLPIQPN*SQTWNQ
Trigger: CTGATTCCATGTTTGGGATCAGTTTGGCTGTATTGG...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR TCA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGACAGTGGCAATTCAATaGAGACATGAGCCCGAACGG +
Preference number: 4 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWTVAIQ*RHEPER
Trigger: CCGTTCGGGCTCATGTCTTCATTGAATTGCCACTGT...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTATCCTTGCTCTCCTTCTaGACGTTAGCTCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLSLLSF*TLAPLS
Trigger: TGACAGGGGAGCTAACGTGCAGAAGGAGAGCAAGGA...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGAGAGGAGAGATATCTaGCCAATGGCCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLERRDI*PMATLV
Trigger: AACCAGGGTGGCCATTGGGCAGATATCTCTCCTCTC...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp GTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATCTTTGACGTTTTCCTaGAGCTGGAACACAGTATCT +
Preference number: 4 (lower is better)
Translates to: VVLLVGERSVLLRKQSLPSLTFS*SWNTVS
Trigger: AGATACTGTGTTCCAGCTGCAGGAAAACGTCAAAGA...TGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp CCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTACTCCACAGTGACCAAGAGCTGTaGTTCATGAGCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: PEKAEPAISQRDASNLLHSDQEL*FMSIIP
Trigger: GGGGATGATGCTCATGAAGCACAGCTCTTGGTCACT...GTGGAGTAAGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTCTCCCTCCTTGCGTATaGCACCCATCACATCCAGAT +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLLPPCV*HPSHPD
Trigger: ATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAG...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCCCAATGGCCACCCTaGTTCATGTACACATACACA +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDAQWPP*FMYTYT
Trigger: TGTGTATGTGTACATGAACCAGGGTGGCCATTGGGC...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGGGCTCGGTGATAGTTaGTTGGAAATGAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDGLGDS*LEMRSL
Trigger: CAAGCTCCTCATTTCCAACCAACTATCACCGAGCCC...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR TCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAATTCAATGAAGACATaGGCCCGAACGGAGACCGGA +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDANSMKT*ARTETG
Trigger: TCCGGTCTCCGTTCGGGCTCATGTCTTCATTGAATT...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTCCAGTTATAGGTTCCTaGAGCCCCAAAGACGAGGTA +
Preference number: 4 (lower is better)
Translates to: RKICAPEKAEPAISQRDAPVIGS*SPKDEV
Trigger: TACCTCGTCTTTGGGGCTCCAGGAACCTATAACTGG...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTACCTTGCTTCAGAAAGTaGATCTCAGTCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ERSVLLRKQSLPYLNVMLPCFRK*ISVLWV
Trigger: CACCCAGAGGACTGAGATCCACTTTCTGAAGCAAGG...TAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTAGTTACTCCTCTGGATaGTGCCTGTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLSYSSG*CLSSPP
Trigger: AGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACT...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTACGTTTTCCTGCAGCTaGAACACAGTATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLTFSCS*NTVSPQ
Trigger: CTGTGGAGATACTGTGTTCCAGCTGCAGGAAAACGT...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR GCA 90 bp TCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTAGCAACTTCTTTGACGTTTTCCTaGAGCTGGAACACAGTATCT +
Preference number: 4 (lower is better)
Translates to: SVLLRKQSLPYLNVMLATSLTFS*SWNTVS
Trigger: AGATACTGTGTTCCAGCTGCAGGAAAACGTCAAAGA...AGTTGCTAGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp CGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAACTGAGCTATCAATGTTaGTCACAAAAAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: RDASNLLHYLHPKEPSWELSYQC*SQKATP
Trigger: AGGGGTTGCTTTTTGTGACCAACATTGATAGCTCAG...TTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS-3UTR CCA 90 bp CTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGTTTTATACACCAGCTaGTCAGGGTCTGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: LNVMLATYSTISIPRSHLVLYTS*SGSELS
Trigger: TGATAGCTCAGACCCTGACCAGCTGGTGTATAAAAC...AAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS-3UTR CCA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATTCAATGAAGATCTCTTaGGAGACATGTAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYSMKIS*ETCRTG
Trigger: ACCTGTTCTACATGTCTCCCAAGAGATCTTCATTGA...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CCA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATTCAATGAAGATCTCTTaGGAGACATGTAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GRKICAPEKAEPAISQRDSMKIS*ETCRTG
Trigger: ACCTGTTCTACATGTCTCCCAAGAGATCTTCATTGA...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp AGCAGAGGACACTGGCCACCAGGATGTGCTAGGCTCCACCTTCTCTaGAGGCTCCTGCGGCTCCGGCTGCCCCAGCTCTCGCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRGHWPPGCARLHLL*RLLRLRLPQLSPPP
Trigger: AGGAGGCGGCGAGAGCTGGGGCAGCCGGAGCCGCAGGAGCCTCCAGAGAAGGTGGAGCCTAGCACATCCTGGTGGCCAGTGTCCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp TCTAGGCTCAGGGGACAAGCAAAGAGGCCTCCGGTGCGGTTTGCCTaGTGTCCAGGAAGAGCCAGGGCCTGGGGAGCGCCCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SRLRGQAKRPPVRFA*CPGRARAWGAPTSS
Trigger: GCTGCTGGTGGGCGCTCCCCAGGCCCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCCTCTTTGCTTGTCCCCTGAGCCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp GCTCCTGCGGCTCCGGCTGCCCCAGCTCTCGCCGCCTCCTATCCCTaGTGTCCACATCCAGCTGGAGGATGTTGGGTCTTGGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: APAAPAAPALAASYP*CPHPAGGCWVLGNR
Trigger: TCTGTTCCCCAAGACCCAACATCCTCCAGCTGGATGTGGACAGCAGGGATAGGAGGCGGCGAGAGCTGGGGCAGCCGGAGCCGCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp CTGCGTGGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTTaGAGAATCCCAGCTTCCACAGCAGCAGTACCAGCAAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LRGTGARWPRGASPA*RIPASTAAVPARPG
Trigger: TCCTGGCCTTGCTGGTACTGCTGCTGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp CGAGGGATCTTCACTGCGTGGTACTGGGGCACGGTGGCCTCGGGGTaGTTCGCCCGCTTGAAGAATCCCAGCTTCCACAGCAGCAGTACC +
Preference number: 5 (lower is better)
Translates to: RGIFTAWYWGTVASG*FARLKNPSFHSSST
Trigger: GGTACTGCTGCTGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp CTTCTCCTCCTTGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACTaGGTGGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTT +
Preference number: 5 (lower is better)
Translates to: LLLLELLSVFPRDLH*VVLGHGGLGVLRPL
Trigger: AAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp TCCTCCTTGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACTGCGTaGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSLNCCRSSRGIFTA*YWGTVASGCFARLK
Trigger: CTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp TTGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACTGCGTGGTACTaGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTTGAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: LNCCRSSRGIFTAWY*GTVASGCFARLKNP
Trigger: GGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCGGCCTCCGGTGCGGTTaGCCTGCTGTCCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGGLRCG*PAVQEE
Trigger: CTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCC...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCACACGTAACAATCTaGCCCCCTGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SPSQGAILGKGRKEPTGWAHVTI*PPGPWL
Trigger: GAGCCAGGGGCCAGGGGGCAAGATTGTTACGTGTGC...CCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp GCATTGAGGATGGGAGCCACAGTGGGGAGCTCCTGGCCAGGTGCTTaGCTCCCTAATGGAGGGGTTCGGAGACCATATGACAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: ALRMGATVGSSWPGA*LPNGGVRRPYDRVT
Trigger: GGTGACCCTGTCATATGGTCTCCGAACCCCTCCATTAGGGAGGCAAGCACCTGGCCAGGAGCTCCCCACTGTGGCTCCCATCCTCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp GGTCATGTTGGTGCTTCAGCCACACGGTGCCGGAGGACTGATGCCTaGGGTCATCCAGGCCTCGGCTCAGAAACGTCACACGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: GHVGASATRCRRTDA*GHPGLGSETSHVEP
Trigger: AGGTTCCACGTGTGACGTTTCTGAGCCGAGGCCTGGATGACCTCAGGCATCAGTCCTCCGGCACCGTGTGGCTGAAGCACCAACATGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp CAGACTCGGTCATGTTGGTGCTTCAGCCACACGGTGCCGGAGGACTaGTGCCTGAGGTCATCCAGGCCTCGGCTCAGAAACGTCACACGT +
Preference number: 5 (lower is better)
Translates to: QTRSCWCFSHTVPED*CLRSSRPRLRNVTR
Trigger: ACGTGTGACGTTTCTGAGCCGAGGCCTGGATGACCTCAGGCATCAGTCCTCCGGCACCGTGTGGCTGAAGCACCAACATGACCGAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp TGGGAGAGTGACCAAGAGCTGTGCTTCATGAGCATCATCCCCATCTaGCTGAGGCCGGGCAGGGTCAGAGGGCAGGTTGGTGACTGTCAG +
Preference number: 5 (lower is better)
Translates to: WESDQELCFMSIIPI*LRPGRVRGQVGDCQ
Trigger: CTGACAGTCACCAACCTGCCCTCTGACCCTGCCCGGCCTCAGGCAGATGGGGATGATGCTCATGAAGCACAGCTCTTGGTCACTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp CTGGGCGCAGTCCAGAGTCACGTTTCTCTTCTCAGCAGAGGACACTaGCCACCAGGATGTGCTAGGCTCCACCTTCTCTGGAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LGAVQSHVSLLSRGH*PPGCARLHLLWRLL
Trigger: CAGGAGCCTCCAGAGAAGGTGGAGCCTAGCACATCCTGGTGGCCAGTGTCCTCTGCTGAGAAGAGAAACGTGACTCTGGACTGCGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp CCTCCATGGCCGAGGGCTGCACGGCCAGATGGGCTCGGTGATAGTTaGTTGGAAATGAGGAGCTTGGACTGTTCCGACGGAAGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: PPWPRAARPDGLGDS*LEMRSLDCSDGRSH
Trigger: GTGGCTTCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCTCGGCCATGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR CAA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCCGGCTGGCGCTATCCTaGCGCAGAATGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: GGSPGGRKICAPEKAEPARLALS*RRMTTA
Trigger: GGCTGTGGTCATTCTGCGCAAGGATAGCGCCAGCCG...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCGCCAGAGAAGAAGAGTaGCTGGGGAGTGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: GGSPGGRKICAPEKAEPAAREEE*LGSGHP
Trigger: GGGGTGGCCACTCCCCAGCAACTCTTCTTCTCTGGC...GGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCGGGTGCTTCGCCCGCTaGAAGAATCCCAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGGCFAR*KNPSFH
Trigger: GTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCC...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp GGGGCTGTAATTGTCGGTGCAGGGCCACCGAAAAGCCGAATAGGCTaGCGGGTTCTCCCTCCTTGCGTATGGCACCCATCACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: GAVIVGAGPPKSRIG*RVLPPCVWHPSHPD
Trigger: ATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGGCAGCCTATTCGGCTTTTCGGTGGCCCTGCACCGACAATTACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp GTTGGTGACTGTCAGTTCCAGGCCTATGAACGGCTGCCCACTCAATaGGAACAGGGCGGTCCTTCCATCCAGATCCATGGGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VGDCQFQAYERLPTQ*EQGGPSIQIHGQSL
Trigger: CAGGCTCTGCCCATGGATCTGGATGGAAGGACCGCCCTGTTCGCATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGACAGTCACCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp CCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGGATCTTCACTGCGTGGTACTGGGGC +
Preference number: 5 (lower is better)
Translates to: PQLLLWMVPVFSSLN*CRSSRGIFTAWYWG
Trigger: GCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGGCCACATGATGTaGAGGAACGCAGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGWGHMM*RNAEPR
Trigger: TCTGGGCTCTGCGTTCCTCAACATCATGTGGCCCCA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp GTTGCTGGGGAGTGGCCACCCCTGAAATGGACAGTGGCAATTCAATaGAGACATGAGCCCGAACGGAGACCGGATCCAGCTCCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VAGEWPPLKWTVAIQ*RHEPERRPDPAPAH
Trigger: GTGAGCAGGAGCTGGATCCGGTCTCCGTTCGGGCTCATGTCTTCATTGAATTGCCACTGTCCATTTCAGGGGTGGCCACTCCCCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp CGAGGGCTGCACGGCCAGATGGGCTCGGTGATAGTTGGTTGGAAATaGGGAGCTTGGACTGTTCCGACGGAAGAAGCCACACTTCCACAG +
Preference number: 5 (lower is better)
Translates to: RGLHGQMGSVIVGWK*GAWTVPTEEATLPQ
Trigger: CTGTGGAAGTGTGGCTTCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS GCA 90 bp TCAGAGGGCAGGTTGGTGACTGTCAGTTCCAGGCCTATGAACGGCTaGCCACTCAATGCGAACAGGGCGGTCCTTCCATCCAGATCCATG +
Preference number: 5 (lower is better)
Translates to: SEGRLVTVSSRPMNG*PLNANRAVLPSRSM
Trigger: CATGGATCTGGATGGAAGGACCGCCCTGTTCGCATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGACAGTCACCAACCTGCCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 90 bp CAGAAAGGTGCTGTTCCAGAGGCGGCCCCAGACGTGAAGCACGGCTaGACGATCAAAGCTGTAGAGTGGGCAGCTGAACACCACACACTT +
Preference number: 5 (lower is better)
Translates to: QKGAVPEAAPDVKHG*TIKAVEWAAEHHTL
Trigger: AAGTGTGTGGTGTTCAGCTGCCCACTCTACAGCTTTGATCGTGCAGCCGTGCTTCACGTCTGGGGCCGCCTCTGGAACAGCACCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp CTGTCGAGACTCATATCGGTGTGCACACGTAACAATCTTGCCCCCTaGCCCCTGGCTCCGGACACTGACTCCCAGCCATTGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LSRLISVCTRNNLAP*PLAPDTDSQPLVLL
Trigger: AAGGAGAACCAATGGCTGGGAGTCAGTGTCCGGAGCCAGGGGCCAGGGGGCAAGATTGTTACGTGTGCACACCGATATGAGTCTCGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp TTCCTGGAGCCCCAAAGACGAGGTAGTGACTGTCAGGGGAGAAGGTaGCAGCTGTGCCCTGCTGACAGAACCCAAACTGTTCATGGCCCT +
Preference number: 5 (lower is better)
Translates to: FLEPQRRGSDCQGRR*QLCPADRTQTVHGP
Trigger: AGGGCCATGAACAGTTTGGGTTCTGTCAGCAGGGCACAGCTGCCACCTTCTCCCCTGACAGTCACTACCTCGTCTTTGGGGCTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp CCTGAACAGAGCAGCGGTATCAGCCAGGGAGCCCACAAGCAGGTCTaGGTAGTGATTTCCATCCACATCCAGGCCACCAGACAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: PEQSSGISQGAHKQV*VVISIHIQATRQGV
Trigger: TACTCCCTGTCTGGTGGCCTGGATGTGGATGGAAATCACTACCCAGACCTGCTTGTGGGCTCCCTGGCTGATACCGCTGCTCTGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp AATGCGAACAGGGCGGTCCTTCCATCCAGATCCATGGGCAGAGCCTaGAACTCTGTGTCGCTGATCCTGGAACAGAACTGGTACCGCTCG +
Preference number: 5 (lower is better)
Translates to: NANRAVLPSRSMGRA*NSVSLILEQNWYRS
Trigger: CGAGCGGTACCAGTTCTGTTCCAGGATCAGCGACACAGAGTTCCAGGCTCTGCCCATGGATCTGGATGGAAGGACCGCCCTGTTCGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGGGCCTCCGGTGCGGTTaGCCTGCTGTCCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRGLRCG*PAVQEE
Trigger: CTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCC...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGCTTGCCCAGCCATCATTGTaGAGATCAGTCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HPKEPSWEKGGRNPRAGLAQPSL*RSVTAS
Trigger: ACTGGCTGTGACTGATCTCAACAATGATGGCTGGGC...AAGCCCAGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCGGGAAGCCATCTTGGTaGAGGTCCCCCAATACAGCC +
Preference number: 5 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPGKPSW*RSPNTA
Trigger: GGCTGTATTGGGGGACCTCAACCAAGATGGCTTCCC...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTGGGAAGCCATCTTGGTaGAGGTCCCCCAATACAGCC +
Preference number: 5 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRAGKPSW*RSPNTA
Trigger: GGCTGTATTGGGGGACCTCAACCAAGATGGCTTCCC...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCCGTCCATCGGCACAGTaGGGTTGTTCCAGATCGATG +
Preference number: 5 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGRPSAQ*GCSRSM
Trigger: CATCGATCTGGAACAACCCAACTGTGCCGATGGACG...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTCCAGCTGGAGGATGTaGGGTCTTGGGGAACAGATC +
Preference number: 5 (lower is better)
Translates to: LSPSQGAILGKGRKEPTGSSWRM*GLGEQI
Trigger: GATCTGTTCCCCAAGACCCAACATCCTCCAGCTGGA...GCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp TCCTTCCATCCAGATCCATGGGCAGAGCCTGGAACTCTGTGTCGCTaGTCCTGGAACAGAACTGGTACCGCTCGAGCTGGAGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SFHPDPWAEPGTLCR*SWNRTGTARAGGCS
Trigger: AGAGCAACCTCCAGCTCGAGCGGTACCAGTTCTGTTCCAGGATCAGCGACACAGAGTTCCAGGCTCTGCCCATGGATCTGGATGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp AGTCCAGAGCACGGACTCCTGAGTACCGTAGAGAGGCTGGGAGAGTaGCCAAGAGCTGTGCTTCATGAGCATCATCCCCATCTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SPEHGLLSTVERLGE*PRAVLHEHHPHLPE
Trigger: CTCAGGCAGATGGGGATGATGCTCATGAAGCACAGCTCTTGGTCACTCTCCCAGCCTCTCTACGGTACTCAGGAGTCCGTGCTCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp GGAGTGGCCACCCCTGAAATGGACAGTGGCAATTCAATGAAGACATaGGCCCGAACGGAGACCGGATCCAGCTCCTGCTCACTGATCGTG +
Preference number: 5 (lower is better)
Translates to: GVATPEMDSGNSMKT*ARTETGSSSCSLIV
Trigger: CACGATCAGTGAGCAGGAGCTGGATCCGGTCTCCGTTCGGGCTCATGTCTTCATTGAATTGCCACTGTCCATTTCAGGGGTGGCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp AACTTCCACTCCCCACCATCCAGCTCATCACGGATGGCCAGGTCCTaGCTTAGCACAAAGCAGCGGCCAATCACATCCCGAGTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NFHSPPSSSSRMARS*LSTKQRPITSRVSK
Trigger: TTTGGAGACTCGGGATGTGATTGGCCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCGTGATGAGCTGGATGGTGGGGAGTGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCCCGGGTTCTCCCTCCTaGCGTATGGCACCCATCACA +
Preference number: 5 (lower is better)
Translates to: LLVGERSVLLRKQSLPYLPGSPS*RMAPIT
Trigger: TGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGG...GAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGATGACCACAGCCCCTTaGTGGTTGGCACGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRMTTAP*WLARGA
Trigger: GGCCCCACGTGCCAACCACAAAGGGGCTGTGGTCAT...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCGGCTGGCGCTATCCTaGCGCAGAATGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: SPGGRKICAPEKAEPAISRLALS*RRMTTA
Trigger: GGCTGTGGTCATTCTGCGCAAGGATAGCGCCAGCCG...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGCTACCGTGACCTCATACTaGACTTTGCTGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: YLHPKEPSWEKGGRNPRATVTSY*TLLPTS
Trigger: GGACGTGGGCAGCAAAGTCAAGTATGAGGTCACGGT...AGCCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp ACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGGGAGGATGTTGGGTCTaGGGGAACAGATCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: TISIPRSHLGKRAEGTHGGGCWV*GNRSLS
Trigger: AGAGAGGGATCTGTTCCCCAAGACCCAACATCCTCC...CCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTGGGTGCTTCGCCCGCTaGAAGAATCCCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SPGGRKICAPEKAEPAISGCFAR*KNPSPQ
Trigger: CTGTGGGCTGGGATTCTTCAAGCGGGCGAAGCACCC...AGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS TCA 90 bp AATCAGGTCTGCCCAGCCATCATTGTTGAGATCAGTCACAGCCAGTaGGTAGCCAAAGCCAGAGGTCAGGCGCTCCCCAGACAGCACAAC +
Preference number: 5 (lower is better)
Translates to: NQVCPAIIVEISHSQ*VAKARGQALPRQHN
Trigger: GTTGTGCTGTCTGGGGAGCGCCTGACCTCTGGCTTTGGCTACTCACTGGCTGTGACTGATCTCAACAATGATGGCTGGGCAGACCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp AGTTGCCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCCGAGGGATCTTCACTGCGTGGTACT +
Preference number: 5 (lower is better)
Translates to: SCPSYSSGWCLSSPP*TAVGLPEGSSLRGT
Trigger: AGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCCGGGTTCTCCCTCCTaGCGTATGGCACCCATCACA +
Preference number: 5 (lower is better)
Translates to: VLLVGERSVLLRKQSLPYPGSPS*RMAPIT
Trigger: TGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGG...ATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGGCCAGAGAAGAAGAGTaGCTGGGGAGTGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQAREEE*LGSGHP
Trigger: GGGGTGGCCACTCCCCAGCAACTCTTCTTCTCTGGC...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAATGGGGCCACATGATGTaGAGGAACGCAGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKWGHMM*RNAEPR
Trigger: TCTGGGCTCTGCGTTCCTCAACATCATGTGGCCCCA...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAGGGTGCTTCGCCCGCTaGAAGAATCCCAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGGCFAR*KNPSFH
Trigger: GTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCC...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGCACTTTGGGGAAGACAGGTTTTACAGGGTGGGTGAGAGGGAGCTCAGAACCCAGCCATTGGTTCTCCTaGCTCTCCTTCTGCACGTTA +
Preference number: 5 (lower is better)
Translates to: GTLGKTGFTGWVRGSSEPSHWFS*LSFCTL
Trigger: TAACGTGCAGAAGGAGAGCAAGGAGAACCAATGGCT...GGGTTCTGAGCTCCCTCTCACCCACCCTGTAAAACCTGTCTTCCCCAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTGCACACGTAACAATCTaGCCCCCTGGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSAHVTI*PPGPWL
Trigger: GAGCCAGGGGCCAGGGGGCAAGATTGTTACGTGTGC...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTATGACCACAGCCCCTTaGTGGTTGGCACGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSMTTAP*WLARGA
Trigger: GGCCCCACGTGCCAACCACAAAGGGGCTGTGGTCAT...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATAGGAGGATGTTGGGTCTaGGGGAACAGATCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GSPGGRKICAPEKAEPAIGGCWV*GNRSLS
Trigger: AGAGAGGGATCTGTTCCCCAAGACCCAACATCCTCC...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp CTTAGCACAAAGCAGCGGCCAATCACATCCCGAGTCTCCAAAGCCTaGTCCACTCTCTGTCGAGACTCATATCGGTGTGCACACGTAACA +
Preference number: 5 (lower is better)
Translates to: LSTKQRPITSRVSKA*STLCRDSYRCAHVT
Trigger: TGTTACGTGTGCACACCGATATGAGTCTCGACAGAGAGTGGACCAGGCTTTGGAGACTCGGGATGTGATTGGCCGCTGCTTTGTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp AAAGACCTTCCCATCTCCGTCAAAGGGAGCTCCCACGGCAATGTCTaGGAAGCCATCTTGGTTGAGGTCCCCCAATACAGCCAAACTGAT +
Preference number: 5 (lower is better)
Translates to: KDLPISVKGSSHGNV*EAILVEVPQYSQTD
Trigger: ATCAGTTTGGCTGTATTGGGGGACCTCAACCAAGATGGCTTCCCAGACATTGCCGTGGGAGCTCCCTTTGACGGAGATGGGAAGGTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCCCAGCCATCATTGTaGAGATCAGTCACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKAQPSL*RSVTAS
Trigger: ACTGGCTGTGACTGATCTCAACAATGATGGCTGGGC...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAGCACCTGTGAAGGTTaGACAACCACCCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRSTCEG*TTTPRL
Trigger: CAGCCTTGGGGTGGTTGTCAAACCTTCACAGGTGCT...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGCACCTGTGAAGGTTaGACAACCACCCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGSTCEG*TTTPRL
Trigger: CAGCCTTGGGGTGGTTGTCAAACCTTCACAGGTGCT...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGTCCAGCTGGAGGATGTaGGGTCTTGGGGAACAGATC +
Preference number: 5 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRSSWRM*GLGEQI
Trigger: GATCTGTTCCCCAAGACCCAACATCCTCCAGCTGGA...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp CTGATCCTGGAACAGAACTGGTACCGCTCGAGCTGGAGGTTGCTCTaGCAGATCTTATCTTCACCGCAGCCTTGCTTCAGAAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: LILEQNWYRSSWRLL*QILSSPQPCFRKWI
Trigger: GATCCACTTTCTGAAGCAAGGCTGCGGTGAAGATAAGATCTGTCAGAGCAACCTCCAGCTCGAGCGGTACCAGTTCTGTTCCAGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 90 bp GGTCCTGTGAGCCGGTCAGCAGGGTCCAAAGTTTTATACACCAGCTaGTCAGGGTCTGAGCTATCAATGTTGGTCACAAAAAGCAACCCC +
Preference number: 5 (lower is better)
Translates to: GPVSRSAGSKVLYTS*SGSELSMLVTKSNP
Trigger: GGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGACCCTGACCAGCTGGTGTATAAAACTTTGGACCCTGCTGACCGGCTCACAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS CCA 90 bp TTGGGTTGTTCCAGATCGATGGCTCTGGGGTCAATGAAGATCTCTTaGGAGACATGTAGAACAGGTCTGGCCCTGAACAGAGCAGCGGTA +
Preference number: 5 (lower is better)
Translates to: LGCSRSMALGSMKIS*ETCRTGLALNRAAV
Trigger: TACCGCTGCTCTGTTCAGGGCCAGACCTGTTCTACATGTCTCCCAAGAGATCTTCATTGACCCCAGAGCCATCGATCTGGAACAACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp ACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGAACCCACGGGTCTGAGCTATCAATGTaGGTCACAAAAAGCAACCCC +
Preference number: 5 (lower is better)
Translates to: TISIPRSHLGKRAEGTHGSELSM*VTKSNP
Trigger: GGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGA...CCCGTGGGTTCCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS-3UTR CAA 90 bp AACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAAGGACCTCCCAGCTCTTCTaGGCGTTCAAAGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: NLLHYLHPKEPSWEKGGRTSQLF*AFKEVG
Trigger: CCCTACTTCTTTGAACGCCAAGAAGAGCTGGGAGGT...CCTTCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGTCTGGGAAGCCATCTaGGTTGAGGTCCCCCAATAC +
Preference number: 5 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWVWEAI*VEVPQY
Trigger: GTATTGGGGGACCTCAACCAAGATGGCTTCCCAGAC...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGTCTCTTCCCTGACCCTCTGTCTAAGGCACTTTGGGGAAGACAGGTTTTACAGGTCTGGGAAGCCATCTaGGTTGAGGTCCCCCAATAC +
Preference number: 5 (lower is better)
Translates to: SLFPDPLSKALWGRQVLQVWEAI*VEVPQY
Trigger: GTATTGGGGGACCTCAACCAAGATGGCTTCCCAGAC...CTGTAAAACCTGTCTTCCCCAAAGTGCCTTAGACAGAGGGTCAGGGAAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATACAGACTCGGTCATGTaGGTGCTTCAGCCACACGGT +
Preference number: 5 (lower is better)
Translates to: GRKICAPEKAEPAISQRDTDSVM*VLQPHG
Trigger: ACCGTGTGGCTGAAGCACCAACATGACCGAGTCTGT...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp CAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGACAGACTCGGTCATGTaGGTGCTTCAGCCACACGGT +
Preference number: 5 (lower is better)
Translates to: QRDASNLLHYLHPKEPSWTDSVM*VLQPHG
Trigger: ACCGTGTGGCTGAAGCACCAACATGACCGAGTCTGT...CCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGAAGATGGAGGGGTGGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAACAATGGCCCGTAGCTaGTCTTTGACGTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRWRGGSPGGRKICAPEKTMARS*SLTFSC
Trigger: GCAGGAAAACGTCAAAGACAAGCTACGGGCCATTGT...TTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACCACCCCTCCATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTTGGGAAAAGGGCGGAACCTCATACTTGACTTaGCTGCCCACGTCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: SNLLHYLHPKEPSWEKGGTSYLT*LPTSLS
Trigger: TGAGAGGGACGTGGGCAGCAAAGTCAAGTATGAGGT...TCCGCCCTTTTCCCAAGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGTTCTCCTGGTGGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATACTCGGTGATAGTTGGTaGGAAATGAGGAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GSPGGRKICAPEKAEPAILGDSW*EMRSLD
Trigger: GTCCAAGCTCCTCATTTCCAACCAACTATCACCGAG...TATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCCACCAGGAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS-3UTR CAA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTCGTCCATCGGCACAGTaGGGTTGTTCCAGATCGATG +
Preference number: 5 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSRPSAQ*GCSRSM
Trigger: CATCGATCTGGAACAACCCAACTGTGCCGATGGACG...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp GGGAGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATACCTCATACTTGACTTaGCTGCCCACGTCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: GRKICAPEKAEPAISQRDTSYLT*LPTSLS
Trigger: TGAGAGGGACGTGGGCAGCAAAGTCAAGTATGAGGT...ATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTACCGTGACCTCATACTaGACTTTGCTGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RKICAPEKAEPAISQRDATVTSY*TLLPTS
Trigger: GGACGTGGGCAGCAAAGTCAAGTATGAGGTCACGGT...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 90 bp AGAAACCTAAATAGCTATTCAAGGTCAAGTCTCCGGCTGGTCCTGTaGGCCGGTCAGCAGGGTCCAAAGTTTTATACACCAGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RNLNSYSRSSLRLVL*AGQQGPKFYTPAGQ
Trigger: CTGACCAGCTGGTGTATAAAACTTTGGACCCTGCTGACCGGCTCACAGGACCAGCCGGAGACTTGACCTTGAATAGCTATTTAGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS-3UTR CAA 90 bp TCTCAACGTGATGCTAGCAACTTACTCCACTATCTCCATCCCAAGGAGCCATCTACCTCCCAGCTCTTCTaGGCGTTCAAAGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: SQRDASNLLHYLHPKEPSTSQLF*AFKEVG
Trigger: CCCTACTTCTTTGAACGCCAAGAAGAGCTGGGAGGT...AGATGGCTCCTTGGGATGGAGATAGTGGAGTAAGTTGCTAGCATCACGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS-3UTR CAA 90 bp AGAAAGATCTGTGCTCCTGAGAAAGCAGAGCCTGCCATATCTCAACGTGATGCTACAATGGCCCGTAGCTaGTCTTTGACGTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RKICAPEKAEPAISQRDATMARS*SLTFSC
Trigger: GCAGGAAAACGTCAAAGACAAGCTACGGGCCATTGT...AGCATCACGTTGAGATATGGCAGGCTCTGCTTTCTCAGGAGCACAGATCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp AGGGGACAAGCAAAGAGGCCTCCGGTGCGGTTTGCCTaGTGTCCAGGAAGAGCCAGGGCCTGGGGAGCGCCC +
Preference number: 6 (lower is better)
Translates to: RGQAKRPPVRFA*CPGRARAWGAP
Trigger: GGGCGCTCCCCAGGCCCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCCTCTTTGCTTGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp GAGGTCATCCAGGCCTCGGCTCAGAAACGTCACACGTaGAACCTGGCCCCGGAGCCTCCGGTCTGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: EVIQASAQKRHT*NLAPEPPVCVP
Trigger: GGGGACACAGACCGGAGGCTCCGGGGCCAGGTTCCACGTGTGACGTTTCTGAGCCGAGGCCTGGATGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TGTCGGTCTTCCCGAGGGATCTTCACTGCGTGGTACTaGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: CRSSRGIFTAWY*GTVASGCFARL
Trigger: CAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp GGCTCAGGGGACAAGCAAAGAGGCCTCCGGTGCGGTTaGCCTGCTGTCCAGGAAGAGCCAGGGCCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GSGDKQRGLRCG*PAVQEEPGPGE
Trigger: CTCCCCAGGCCCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCCTCTTTGCTTGTCCCCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp TCTCCTCTAGGCTCAGGGGACAAGCAAAGAGGCCTCCGGTGCGGTTaGCCTGCTGTCCAGGAAGAGCCAGGGCCTGGGGAGCGCCCACCA +
Preference number: 6 (lower is better)
Translates to: SPLGSGDKQRGLRCG*PAVQEEPGPGERPP
Trigger: TGGTGGGCGCTCCCCAGGCCCTGGCTCTTCCTGGACAGCAGGCAAACCGCACCGGAGGCCTCTTTGCTTGTCCCCTGAGCCTAGAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp AACTGCTGTCGGTCTTCCCGAGGGATCTTCACTGCGTaGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCC +
Preference number: 6 (lower is better)
Translates to: NCCRSSRGIFTA*YWGTVASGCFA
Trigger: GGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp ACTGCGTGGTACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTaGAAGAATCCCAGCTTCCACAGCAGCAGTACCAGCAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TAWYWGTVASGCFAR*KNPSFHSSSTSKAR
Trigger: CCTGGCCTTGCTGGTACTGCTGCTGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp ACTGGGGCACGGTGGCCTCGGGGTGCTTCGCCCGCTTaGAGAATCCCAGCTTCCACAGCAGCAGTACCAGCA +
Preference number: 6 (lower is better)
Translates to: TGARWPRGASPA*RIPASTAAVPA
Trigger: TGCTGGTACTGCTGCTGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp TTCACTGCGTGGTACTGGGGCACGGTGGCCTCGGGGTaGTTCGCCCGCTTGAAGAATCCCAGCTTCCACAGC +
Preference number: 6 (lower is better)
Translates to: FTAWYWGTVASG*FARLKNPSFHS
Trigger: GCTGTGGAAGCTGGGATTCTTCAAGCGGGCGAAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TCCAGGCCTCGGCTCAGAAACGTCACACGTGGAACCTaGCCCCGGAGCCTCCGGTCTGTGTCCCCATCTAAC +
Preference number: 6 (lower is better)
Translates to: SRPRLRNVTRGT*PRSLRSVSPSN
Trigger: GTTAGATGGGGACACAGACCGGAGGCTCCGGGGCCAGGTTCCACGTGTGACGTTTCTGAGCCGAGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TGCCAGGCCCCTGTCCGCCCTCCAGCTCTACCCGCATaGGGTACAGCAGCCACTTTCCATTGGCGATCTCGT +
Preference number: 6 (lower is better)
Translates to: CQAPVRPPALPA*GTAATFHWRSR
Trigger: ACGAGATCGCCAATGGAAAGTGGCTGCTGTACCCCATGCGGGTAGAGCTGGAGGGCGGACAGGGGCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp CAGGTATCAAGCGGCTGGCGCTATCCTTGCGCAGAATaGCCACAGCCCCTTTGTGGTTGGCACGTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: QVSSGWRYPCAE*PQPLCGWHVGP
Trigger: GGGCCCCACGTGCCAACCACAAAGGGGCTGTGGTCATTCTGCGCAAGGATAGCGCCAGCCGCTTGATACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp GGTGCTTCAGCCACACGGTGCCGGAGGACTGATGCCTaGGGTCATCCAGGCCTCGGCTCAGAAACGTCACAC +
Preference number: 6 (lower is better)
Translates to: GASATRCRRTDA*GHPGLGSETSH
Trigger: GTGTGACGTTTCTGAGCCGAGGCCTGGATGACCTCAGGCATCAGTCCTCCGGCACCGTGTGGCTGAAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp CTTGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACTaGGTGGTACTGGGGCACGGTGGCCTCGGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LELLSVFPRDLH*VVLGHGGLGVL
Trigger: AAGCACCCCGAGGCCACCGTGCCCCAGTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp ATGGGAGCCACAGTGGGGAGCTCCTGGCCAGGTGCTTaGCTCCCTAATGGAGGGGTTCGGAGACCATATGAC +
Preference number: 6 (lower is better)
Translates to: MGATVGSSWPGA*LPNGGVRRPYD
Trigger: GTCATATGGTCTCCGAACCCCTCCATTAGGGAGGCAAGCACCTGGCCAGGAGCTCCCCACTGTGGCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp GACCAAGAGCTGTGCTTCATGAGCATCATCCCCATCTaGCTGAGGCCGGGCAGGGTCAGAGGGCAGGTTGGT +
Preference number: 6 (lower is better)
Translates to: DQELCFMSIIPI*LRPGRVRGQVG
Trigger: ACCAACCTGCCCTCTGACCCTGCCCGGCCTCAGGCAGATGGGGATGATGCTCATGAAGCACAGCTCTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp GCTGTTCCAGAGGCGGCCCCAGACGTGAAGCACGGCTaGACGATCAAAGCTGTAGAGTGGGCAGCTGAACAC +
Preference number: 6 (lower is better)
Translates to: AVPEAAPDVKHG*TIKAVEWAAEH
Trigger: GTGTTCAGCTGCCCACTCTACAGCTTTGATCGTGCAGCCGTGCTTCACGTCTGGGGCCGCCTCTGGAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp CCTGCTGTCCACATCCAGCTGGAGGATGTTGGGTCTTaGGGAACAGATCCCTCTCTTGCCAGGCCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: PAVHIQLEDVGS*GTDPSLARPLS
Trigger: GGACAGGGGCCTGGCAAGAGAGGGATCTGTTCCCCAAGACCCAACATCCTCCAGCTGGATGTGGACAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp CCCTGCTGTCCACATCCAGCTGGAGGATGTTGGGTCTaGGGGAACAGATCCCTCTCTTGCCAGGCCCCTGTC +
Preference number: 6 (lower is better)
Translates to: PCCPHPAGGCWV*GNRSLSCQAPV
Trigger: GACAGGGGCCTGGCAAGAGAGGGATCTGTTCCCCAAGACCCAACATCCTCCAGCTGGATGTGGACAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp CCTGGCCCCTGGCTCCGGACACTGACTCCCAGCCATTGGTTCTCCTaGCTCTCCTTCTGCACGTTAGCTCCCCTGTCAATGTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: PGPWLRTLTPSHWFS*LSFCTLAPLSMSTL
Trigger: CAGAGTGGACATTGACAGGGGAGCTAACGTGCAGAAGGAGAGCAAGGAGAACCAATGGCTGGGAGTCAGTGTCCGGAGCCAGGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp CATCCAGGCCACCAGACAGGGAGTAACCAAAGCTCTTaGTACCCACCGCCTCGCCCTCCAGCACCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: HPGHQTGSNQSS*YPPPRPPAPVK
Trigger: CTTCACAGGTGCTGGAGGGCGAGGCGGTGGGTATCAAGAGCTTTGGTTACTCCCTGTCTGGTGGCCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp ATTGTCGGTGCAGGGCCACCGAAAAGCCGAATAGGCTaGCGGGTTCTCCCTCCTTGCGTATGGCACCCATCA +
Preference number: 6 (lower is better)
Translates to: IVGAGPPKSRIG*RVLPPCVWHPS
Trigger: TGATGGGTGCCATACGCAAGGAGGGAGAACCCGGCAGCCTATTCGGCTTTTCGGTGGCCCTGCACCGACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp CTCATATCGGTGTGCACACGTAACAATCTTGCCCCCTaGCCCCTGGCTCCGGACACTGACTCCCAGCCATTG +
Preference number: 6 (lower is better)
Translates to: LISVCTRNNLAP*PLAPDTDSQPL
Trigger: CAATGGCTGGGAGTCAGTGTCCGGAGCCAGGGGCCAGGGGGCAAGATTGTTACGTGTGCACACCGATATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TCCCCACCATCCAGCTCATCACGGATGGCCAGGTCCTaGCTTAGCACAAAGCAGCGGCCAATCACATCCCGA +
Preference number: 6 (lower is better)
Translates to: SPPSSSSRMARS*LSTKQRPITSR
Trigger: TCGGGATGTGATTGGCCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCGTGATGAGCTGGATGGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TCCCCAGCTCACACTCGACATGAGAGGCGCTGTCATTaGACAGGCAGAGCGGCTTCTCCACAGAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SPAHTRHERRCH*TGRAASPQSPE
Trigger: CTCTGGACTCTGTGGAGAAGCCGCTCTGCCTGTCCAATGACAGCGCCTCTCATGTCGAGTGTGAGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp AGTGGGCAGCTGAACACCACACACTTGGCCGTGCCCTaGGCGCAGTCCAGAGTCACGTTTCTCTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SGQLNTTHLAVP*AQSRVTFLFSA
Trigger: TGCTGAGAAGAGAAACGTGACTCTGGACTGCGCCCAGGGCACGGCCAAGTGTGTGGTGTTCAGCTGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp CCGAGGGCTGCACGGCCAGATGGGCTCGGTGATAGTTaGTTGGAAATGAGGAGCTTGGACTGTTCCGACGGA +
Preference number: 6 (lower is better)
Translates to: PRAARPDGLGDS*LEMRSLDCSDG
Trigger: TCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS CCA 72 bp CTCCACCCTGGCCGTGCCCTTCCAGTTATAGGTTCCTaGAGCCCCAAAGACGAGGTAGTGACTGTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: LHPGRALPVIGS*SPKDEVVTVRG
Trigger: TCCCCTGACAGTCACTACCTCGTCTTTGGGGCTCCAGGAACCTATAACTGGAAGGGCACGGCCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218290.2
CDS CAA 72 bp TGTCGAGACTCATATCGGTGTGCACACGTAACAATCTaGCCCCCTGGCCCCTGGCTCCGGACACTGACTCCC +
Preference number: 6 (lower is better)
Translates to: CRDSYRCAHVTI*PPGPWLRTLTP
Trigger: GGGAGTCAGTGTCCGGAGCCAGGGGCCAGGGGGCAAGATTGTTACGTGTGCACACCGATATGAGTCTCGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp TGCAGGGCCACCGAAAAGCCGAATAGGCTGCCGGGTTCTCCCTCCTaGCGTATGGCACCCATCACATCCAGATTGAAGGCGATAGCCGGT +
Preference number: 6 (lower is better)
Translates to: CRATEKPNRLPGSPS*RMAPITSRLKAIAG
Trigger: ACCGGCTATCGCCTTCAATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGGCAGCCTATTCGGCTTTTCGGTGGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp CCATGGCCGAGGGCTGCACGGCCAGATGGGCTCGGTGATAGTTGGTaGGAAATGAGGAGCTTGGACTGTTCCGACGGAAGAAGCCACACT +
Preference number: 6 (lower is better)
Translates to: PWPRAARPDGLGDSW*EMRSLDCSDGRSHT
Trigger: AGTGTGGCTTCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCTCGGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS TCA 72 bp CCAGATCCATGGGCAGAGCCTGGAACTCTGTGTCGCTaGTCCTGGAACAGAACTGGTACCGCTCGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: PDPWAEPGTLCR*SWNRTGTARAG
Trigger: TCCAGCTCGAGCGGTACCAGTTCTGTTCCAGGATCAGCGACACAGAGTTCCAGGCTCTGCCCATGGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp CCTCTCTTCATAGGGTTCCCCAGCTCACACTCGACATaGGAGGCGCTGTCATTGGACAGGCAGAGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: PLFIGFPSSHST*EALSLDRQSGF
Trigger: GAAGCCGCTCTGCCTGTCCAATGACAGCGCCTCTCATGTCGAGTGTGAGCTGGGGAACCCTATGAAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp CGAGGTAGTGACTGTCAGGGGAGAAGGTGGCAGCTGTaGCCTGCTGACAGAACCCAAACTGTTCATGGCCCT +
Preference number: 6 (lower is better)
Translates to: RGSDCQGRRWQL*PADRTQTVHGP
Trigger: AGGGCCATGAACAGTTTGGGTTCTGTCAGCAGGGCACAGCTGCCACCTTCTCCCCTGACAGTCACTACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp TGTCAGTTCCAGGCCTATGAACGGCTGCCCACTCAATaGGAACAGGGCGGTCCTTCCATCCAGATCCATGGG +
Preference number: 6 (lower is better)
Translates to: CQFQAYERLPTQ*EQGGPSIQIHG
Trigger: CCCATGGATCTGGATGGAAGGACCGCCCTGTTCGCATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp AGGTTGGTGACTGTCAGTTCCAGGCCTATGAACGGCTaGCCACTCAATGCGAACAGGGCGGTCCTTCCATCC +
Preference number: 6 (lower is better)
Translates to: RLVTVSSRPMNG*PLNANRAVLPS
Trigger: GGATGGAAGGACCGCCCTGTTCGCATTGAGTGGGCAGCCGTTCATAGGCCTGGAACTGACAGTCACCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp CTCCTCTGGATGGTGCCTGTCTTCTCCTCCTTGAACTaGTGTCGGTCTTCCCGAGGGATCTTCACTGCGTGG +
Preference number: 6 (lower is better)
Translates to: LLWMVPVFSSLN*CRSSRGIFTAW
Trigger: CCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp AGAACTTCCACTCCCCACCATCCAGCTCATCACGGATaGCCAGGTCCTGGCTTAGCACAAAGCAGCGGCCAA +
Preference number: 6 (lower is better)
Translates to: RTSTPHHPAHHG*PGPGLAQSSGQ
Trigger: TTGGCCGCTGCTTTGTGCTAAGCCAGGACCTGGCCATCCGTGATGAGCTGGATGGTGGGGAGTGGAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp CTCCTATCCCTGCTGTCCACATCCAGCTGGAGGATGTaGGGTCTTGGGGAACAGATCCCTCTCTTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LLSLLSTSSWRM*GLGEQIPLLPG
Trigger: GCCTGGCAAGAGAGGGATCTGTTCCCCAAGACCCAACATCCTCCAGCTGGATGTGGACAGCAGGGATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp CTGCCGGGTTCTCCCTCCTTGCGTATGGCACCCATCACATCCAGATaGAAGGCGATAGCCGGTGGTAAGAACAGTCCAGCGAGCAAGGAA +
Preference number: 6 (lower is better)
Translates to: LPGSPSLRMAPITSR*KAIAGGKNSPASKE
Trigger: TTCCTTGCTCGCTGGACTGTTCTTACCACCGGCTATCGCCTTCAATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp GAGTTGCCCCAGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACTGCGTGGTAC +
Preference number: 6 (lower is better)
Translates to: ELPQLLLWMVPVFSS*NCCRSSRGIFTAWY
Trigger: GTACCACGCAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTGGGGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp TGCCCAGCCATCATTGTTGAGATCAGTCACAGCCAGTaGGTAGCCAAAGCCAGAGGTCAGGCGCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: CPAIIVEISHSQ*VAKARGQALPR
Trigger: TCTGGGGAGCGCCTGACCTCTGGCTTTGGCTACTCACTGGCTGTGACTGATCTCAACAATGATGGCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp CCCCAAAGACGAGGTAGTGACTGTCAGGGGAGAAGGTaGCAGCTGTGCCCTGCTGACAGAACCCAAACTGTT +
Preference number: 6 (lower is better)
Translates to: PQRRGSDCQGRR*QLCPADRTQTV
Trigger: AACAGTTTGGGTTCTGTCAGCAGGGCACAGCTGCCACCTTCTCCCCTGACAGTCACTACCTCGTCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp ACCGAAAAGCCGAATAGGCTGCCGGGTTCTCCCTCCTaGCGTATGGCACCCATCACATCCAGATTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: TEKPNRLPGSPS*RMAPITSRLKA
Trigger: CGCCTTCAATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAGAACCCGGCAGCCTATTCGGCTTTTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp TGGCTCCGGACACTGACTCCCAGCCATTGGTTCTCCTaGCTCTCCTTCTGCACGTTAGCTCCCCTGTCAATG +
Preference number: 6 (lower is better)
Translates to: WLRTLTPSHWFS*LSFCTLAPLSM
Trigger: CATTGACAGGGGAGCTAACGTGCAGAAGGAGAGCAAGGAGAACCAATGGCTGGGAGTCAGTGTCCGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp AGCACAACCTCAGGTATCAAGCGGCTGGCGCTATCCTaGCGCAGAATGACCACAGCCCCTTTGTGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: STTSGIKRLALS*RRMTTAPLWLA
Trigger: TGCCAACCACAAAGGGGCTGTGGTCATTCTGCGCAAGGATAGCGCCAGCCGCTTGATACCTGAGGTTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp CAGCTGGAACACAGTATCTCCACAGACTCGGTCATGTaGGTGCTTCAGCCACACGGTGCCGGAGGACTGATG +
Preference number: 6 (lower is better)
Translates to: QLEHSISTDSVM*VLQPHGAGGLM
Trigger: CATCAGTCCTCCGGCACCGTGTGGCTGAAGCACCAACATGACCGAGTCTGTGGAGATACTGTGTTCCAGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp AGGGCTGCACGGCCAGATGGGCTCGGTGATAGTTGGTaGGAAATGAGGAGCTTGGACTGTTCCGACGGAAGA +
Preference number: 6 (lower is better)
Translates to: RAARPDGLGDSW*EMRSLDCSDGR
Trigger: TCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS TCA 72 bp GGGCACCCACAATCAGGTCTGCCCAGCCATCATTGTTaGGATCAGTCACAGCCAGTGAGTAGCCAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: GHPQSGLPSHHC*DQSQPVSSQSQ
Trigger: CTGGCTTTGGCTACTCACTGGCTGTGACTGATCTCAACAATGATGGCTGGGCAGACCTGATTGTGGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp GAGTGGCCACCCCTGAAATGGACAGTGGCAATTCAATaGAGACATGAGCCCGAACGGAGACCGGATCCAGCT +
Preference number: 6 (lower is better)
Translates to: EWPPLKWTVAIQ*RHEPERRPDPA
Trigger: AGCTGGATCCGGTCTCCGTTCGGGCTCATGTCTTCATTGAATTGCCACTGTCCATTTCAGGGGTGGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp CACGGCCAGATGGGCTCGGTGATAGTTGGTTGGAAATaGGGAGCTTGGACTGTTCCGACGGAAGAAGCCACA +
Preference number: 6 (lower is better)
Translates to: HGQMGSVIVGWK*GAWTVPTEEAT
Trigger: TGTGGCTTCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS CCA 72 bp AAGCAGCGGCCAATCACATCCCGAGTCTCCAAAGCCTaGTCCACTCTCTGTCGAGACTCATATCGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: KQRPITSRVSKA*STLCRDSYRCA
Trigger: TGCACACCGATATGAGTCTCGACAGAGAGTGGACCAGGCTTTGGAGACTCGGGATGTGATTGGCCGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp TCTCCCTCCTTGCGTATGGCACCCATCACATCCAGATaGAAGGCGATAGCCGGTGGTAAGAACAGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: SPSLRMAPITSR*KAIAGGKNSPA
Trigger: CGCTGGACTGTTCTTACCACCGGCTATCGCCTTCAATCTGGATGTGATGGGTGCCATACGCAAGGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp GGAGCTCCCACGGCAATGTCTGGGAAGCCATCTTGGTaGAGGTCCCCCAATACAGCCAAACTGATCCCAAAC +
Preference number: 6 (lower is better)
Translates to: GAPTAMSGKPSW*RSPNTAKLIPN
Trigger: GTTTGGGATCAGTTTGGCTGTATTGGGGGACCTCAACCAAGATGGCTTCCCAGACATTGCCGTGGGAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp AGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTTaGACTGCTGTCGGTCTTCCCGAGGGATCTTCACTG +
Preference number: 6 (lower is better)
Translates to: SYSSGWCLSSPP*TAVGLPEGSSL
Trigger: CAGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp GTCCACACAGACCAAGCGTCCATCGGCACAGTTGGGTaGTTCCAGATCGATGGCTCTGGGGTCAATGAAGAT +
Preference number: 6 (lower is better)
Translates to: VHTDQASIGTVG*FQIDGSGVNED
Trigger: ATCTTCATTGACCCCAGAGCCATCGATCTGGAACAACCCAACTGTGCCGATGGACGCTTGGTCTGTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp CACTTTCCATTGGCGATCTCGTGGGGCCACATGATGTaGAGGAACGCAGAGCCCAGAGTATTGAGAGACTGG +
Preference number: 6 (lower is better)
Translates to: HFPLAISWGHMM*RNAEPRVLRDW
Trigger: CCAGTCTCTCAATACTCTGGGCTCTGCGTTCCTCAACATCATGTGGCCCCACGAGATCGCCAATGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp CAGTTACTCCTCTGGATGGTGCCTGTCTTCTCCTCCTaGAACTGCTGTCGGTCTTCCCGAGGGATCTTCACT +
Preference number: 6 (lower is better)
Translates to: QLLLWMVPVFSS*NCCRSSRGIFT
Trigger: AGTGAAGATCCCTCGGGAAGACCGACAGCAGTTCAAGGAGGAGAAGACAGGCACCATCCAGAGGAGTAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp GAACAGAACTGGTACCGCTCGAGCTGGAGGTTGCTCTaGCAGATCTTATCTTCACCGCAGCCTTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: EQNWYRSSWRLL*QILSSPQPCFR
Trigger: TCTGAAGCAAGGCTGCGGTGAAGATAAGATCTGTCAGAGCAACCTCCAGCTCGAGCGGTACCAGTTCTGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp ATCAGGGGAGCCACAGATTCGGAGAGGAGAGATATCTaGCCAATGGCCACCCTGGTTCATGTACACATACAC +
Preference number: 6 (lower is better)
Translates to: IRGATDSERRDI*PMATLVHVHIH
Trigger: GTGTATGTGTACATGAACCAGGGTGGCCATTGGGCAGATATCTCTCCTCTCCGAATCTGTGGCTCCCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp TTTATGTCCACACAGACCAAGCGTCCATCGGCACAGTaGGGTTGTTCCAGATCGATGGCTCTGGGGTCAATG +
Preference number: 6 (lower is better)
Translates to: FMSTQTKRPSAQ*GCSRSMALGSM
Trigger: CATTGACCCCAGAGCCATCGATCTGGAACAACCCAACTGTGCCGATGGACGCTTGGTCTGTGTGGACATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp GATGGGCTCGGTGATAGTTGGTTGGAAATGAGGAGCTaGGACTGTTCCGACGGAAGAAGCCACACTTCCACA +
Preference number: 6 (lower is better)
Translates to: DGLGDSWLEMRS*DCSDGRSHTST
Trigger: TGTGGAAGTGTGGCTTCTTCCGTCGGAACAGTCCAAGCTCCTCATTTCCAACCAACTATCACCGAGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219427.2
CDS CAA 90 bp GATCTTTATGTCCACACAGACCAAGCGTCCATCGGCACAGTTGGGTaGTTCCAGATCGATGGCTCTGGGGTCAATGAAGATCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: DLYVHTDQASIGTVG*FQIDGSGVNEDLLG
Trigger: TCCCAAGAGATCTTCATTGACCCCAGAGCCATCGATCTGGAACAACCCAACTGTGCCGATGGACGCTTGGTCTGTGTGGACATAAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp TCCAGATCGATGGCTCTGGGGTCAATGAAGATCTCTTaGGAGACATGTAGAACAGGTCTGGCCCTGAACAGA +
Preference number: 6 (lower is better)
Translates to: SRSMALGSMKIS*ETCRTGLALNR
Trigger: TCTGTTCAGGGCCAGACCTGTTCTACATGTCTCCCAAGAGATCTTCATTGACCCCAGAGCCATCGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp GAGGTTGCTCTGACAGATCTTATCTTCACCGCAGCCTaGCTTCAGAAAGTGGATCTCAGTCCTCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: EVALTDLIFTAA*LQKVDLSPLGA
Trigger: AGCACCCAGAGGACTGAGATCCACTTTCTGAAGCAAGGCTGCGGTGAAGATAAGATCTGTCAGAGCAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS TCA 72 bp AGTTGGGTTGTTCCAGATCGATGGCTCTGGGGTCAATaGAGATCTCTTGGGAGACATGTAGAACAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SWVVPDRWLWGQ*RSLGRHVEQVW
Trigger: CCAGACCTGTTCTACATGTCTCCCAAGAGATCTTCATTGACCCCAGAGCCATCGATCTGGAACAACCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 72 bp AGACCATATGACAGGGTCACCACAATGGCCCGTAGCTaGTCTTTGACGTTTTCCTGCAGCTGGAACACAGTA +
Preference number: 6 (lower is better)
Translates to: RPYDRVTTMARS*SLTFSCSWNTV
Trigger: TACTGTGTTCCAGCTGCAGGAAAACGTCAAAGACAAGCTACGGGCCATTGTGGTGACCCTGTCATATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CAA 90 bp AAACAGATCTTTATGTCCACACAGACCAAGCGTCCATCGGCACAGTaGGGTTGTTCCAGATCGATGGCTCTGGGGTCAATGAAGATCTCT +
Preference number: 6 (lower is better)
Translates to: KQIFMSTQTKRPSAQ*GCSRSMALGSMKIS
Trigger: AGAGATCTTCATTGACCCCAGAGCCATCGATCTGGAACAACCCAACTGTGCCGATGGACGCTTGGTCTGTGTGGACATAAAGATCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS CCA 72 bp AGCCGGTCAGCAGGGTCCAAAGTTTTATACACCAGCTaGTCAGGGTCTGAGCTATCAATGTTGGTCACAAAA +
Preference number: 6 (lower is better)
Translates to: SRSAGSKVLYTS*SGSELSMLVTK
Trigger: TTTTGTGACCAACATTGATAGCTCAGACCCTGACCAGCTGGTGTATAAAACTTTGGACCCTGCTGACCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4
CDS CAA 72 bp AGCAACAAGTTCTTAATGGAGGATTTCACTGTGATGTaGGCTCGGACGATCACTTCCAGGGATTTCACGGCC +
Preference number: 6 (lower is better)
Translates to: SNKFLMEDFTVM*ARTITSRDFTA
Trigger: GGCCGTGAAATCCCTGGAAGTGATCGTCCGAGCCAACATCACAGTGAAATCCTCCATTAAGAACTTGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
CDS GCA 72 bp GGGGTCCAAGTACACCATCACTGGAATCACTGTGGATaGATCTCTGAGCAACAAGTTCTTAATGGAGGATTT +
Preference number: 6 (lower is better)
Translates to: GVQVHHHWNHCG*ISEQQVLNGGF
Trigger: AAATCCTCCATTAAGAACTTGTTGCTCAGAGATGCATCCACAGTGATTCCAGTGATGGTGTACTTGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099112.4
ENSMUST00000218290.2
ENSMUST00000219427.2
CDS CCA 72 bp TATACACCAGCTGGTCAGGGTCTGAGCTATCAATGTTaGTCACAAAAAGCAACCCCTTCCAGTTATAGGTTC +
Preference number: 6 (lower is better)
Translates to: YTPAGQGLSYQC*SQKATPSSYRF
Trigger: GAACCTATAACTGGAAGGGGTTGCTTTTTGTGACCAACATTGATAGCTCAGACCCTGACCAGCTGGTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099112.4