Pregenerated sensors for ITGA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027111Ensembl transcript IDs: ENSMUST00000028522.10, ENSMUST00000112101.8, ENSMUST00000155249.2, ENSMUST00000238991.2
Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTaGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LWEQAGIATLLAQVT*GRASQQCRWAGPAP Trigger: TGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR CCA 90 bp | AGAAGCGCCCCAAGCCTGGCCATCGCTCTAGAACAAGGACAACCATaGAGACAAGGACAAGAGAGCCTCCTCCCAGGAGATACACAAACT | + |
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Preference number: 1 (lower is better) Translates to: RSAPSLAIALEQGQP*RQGQESLLPGDTQT Trigger: AGTTTGTGTATCTCCTGGGAGGAGGCTCTCTTGTCCTTGTCTCCATGGTTGTCCTTGTTCTAGAGCGATGGCCAGGCTTGGGGCGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR TCA 90 bp | TTGGGGAAAGGACCATGTCCTGAAGTATTCAAGAAGCCCACGTGCTaGCAAGGATTCTTTGTTGTAATGGCTTTGGCCCAGGAGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LGKGPCPEVFKKPTC*QGFFVVMALAQERK Trigger: CTTTCTCTCCTGGGCCAAAGCCATTACAACAAAGAATCCTTGTCAGCACGTGGGCTTCTTGAATACTTCAGGACATGGTCCTTTCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 90 bp | ATGTACAATCAAAATGGCCATGTTGGGATCACTGGGTCAATACCTTaGAAAGGAACTGTAGCAGTAACTGAAATCCCTCTTGCCCATGGG | + |
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Preference number: 1 (lower is better) Translates to: MYNQNGHVGITGSIP*KGTVAVTEIPLAHG Trigger: CCCATGGGCAAGAGGGATTTCAGTTACTGCTACAGTTCCTTTCCAAGGTATTGACCCAGTGATCCCAACATGGCCATTTTGATTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR TCA 90 bp | TTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTaGAACTGTAGGTCCATACTGGGTGTCGTCAGTCTGAAATCATAT | + |
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Preference number: 1 (lower is better) Translates to: LAVQNRSLRCNNIHS*NCRSILGVVSLKSY Trigger: ATATGATTTCAGACTGACGACACCCAGTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTTGCACAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGTCCCAGCAGTGCAGATaGGCAGGCCCTGCCCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGSQQCR*AGPAPA Trigger: CGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGA...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCGGCTTTGAAGCCACCTaGATTTCTGAGCTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: GAGWDSHSVSTGDLGESIGFEAT*ISELEK Trigger: TTTTTCCAGCTCAGAAATTCAGGTGGCTTCAAAGCC...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAAACAATATCCACAGTTaGAACTGTAGGTCCATACTG | + |
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Preference number: 2 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSNNIHS*NCRSIL Trigger: CAGTATGGACCTACAGTTTCAACTGTGGATATTGTT...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR CAA 90 bp | CGACCCTGTGCTTTAGTGACAAGGGAGACGGGAACCTGTGTGCATTaGGCGTCAGCAAGGGTCCTCACTTCTAGGAGATGGAGAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RPCALVTRETGTCVH*ASARVLTSRRWRKK Trigger: CTTCTTTCTCCATCTCCTAGAAGTGAGGACCCTTGCTGACGCCAAATGCACACAGGTTCCCGTCTCCCTTGTCACTAAAGCACAGGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACGGCTTTGAAGCCACCTaGATTTCTGAGCTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDGFEAT*ISELEK Trigger: TTTTTCCAGCTCAGAAATTCAGGTGGCTTCAAAGCC...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATCAGACAAACCAGTGTaGCTGCCTTCATTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQSQMSLEFGIGHFSMVSSDKPV*LPSLLW Trigger: CCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGA...TGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTGGGATTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCAACAAACTCTCCCACATaGAACAGGTTAAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SQSQMSLEFGIGHFSMVSTNSPT*NRLSRQ Trigger: CTGCCTGCTTAACCTGTTGCATGTGGGAGAGTTTGT...TGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTGGGATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCGTGCCCTCCTCTCTATaGGTAACTTTCGTTTTCATT | + |
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Preference number: 2 (lower is better) Translates to: EIIYGGAEQALKPPEFLSVPSSL*VTFVFI Trigger: AATGAAAACGAAAGTTACTCATAGAGAGGAGGGCAC...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTGCAAGGCAAGCCACTTaGAAACAACTGTTAATGGGA | + |
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Preference number: 2 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFARQAT*KQLLMG Trigger: TCCCATTAACAGTTGTTTCCAAGTGGCTTGCCTTGC...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAGGGGCTAAGAACACGAAACCTGGTCAAACTCCATTACAACATCTTGAAGTCGACAAAAGCTCCTaGCCCCAGGGAATTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: KKGAKNTKPGQTPLQHLEVDKSS*PQGIPK Trigger: TTTTGGAATTCCCTGGGGGCAGGAGCTTTTGTCGAC...TTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTCTTAGCCCCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CAA 90 bp | AATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTaGAAATTCCGAGTGGGACACGATACAAAAACACATGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: NSKTNKKSGPISHAL*KFRVGHDTKTHGKG Trigger: CCCTTTGCCATGTGTTTTTGTATCGTGTCCCACTCGGAATTTCAAAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 72 bp | CAGGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATaGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVTWGRASQQCR*AGPAPACGSQP Trigger: TGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGGAGCTGAGCAGGCTTaGAAGCCACCTGAATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GDLGESIPAVQMGRPCPSGAEQA*KPPEFL Trigger: CAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCC...GCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR GCA 72 bp | TGGCCCAGGAGAGAAAGGAGGGAAAAGGAGGGCGCATaGTTAGCTAGCACAGGACCACGTCCAAGCGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: WPRRERREKEGA*LASTGPRPSGS Trigger: ACTGCCGCTTGGACGTGGTCCTGTGCTAGCTAAGCATGCGCCCTCCTTTTCCCTCCTTTCTCTCCTGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 72 bp | TTGATCTCTCGCTCTTCTTTCCGGATCCGCACCGCATaGTATCGGGGAATGCTGTCATCGTACCTAGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: LISRSSFRIRTA*YRGMLSSYLER Trigger: GCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGCGGTGCGGATCCGGAAAGAAGAGCGAGAGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
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| 3UTR CCA 72 bp | CCAAGCCTGGCCATCGCTCTAGAACAAGGACAACCATaGAGACAAGGACAAGAGAGCCTCCTCCCAGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: PSLAIALEQGQP*RQGQESLLPGD Trigger: ATCTCCTGGGAGGAGGCTCTCTTGTCCTTGTCTCCATGGTTGTCCTTGTTCTAGAGCGATGGCCAGGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR GCA 72 bp | GAGCCTCCTCCCAGGAGATACACAAACTCTCCCACATaGAACAGGTTAAGCAGGCAGTCGACAAAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: EPPPRRYTNSPT*NRLSRQSTKAP Trigger: AGGAGCTTTTGTCGACTGCCTGCTTAACCTGTTGCATGTGGGAGAGTTTGTGTATCTCCTGGGAGGAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 72 bp | GTCAATCTTATGAGAAGAATGCTTGTGGGAGCAGGCTaGGATAGCCACTCTGTTAGCACAGGTGACCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VNLMRRMLVGAG*DSHSVSTGDLG Trigger: CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCTCATAAGATTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR TCA 72 bp | GCACGCTGGTGGTTACTTGGGGAAAGGACCATGTCCTaGAGTATTCAAGAAGCCCACGTGCTGACAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: ARWWLLGERTMS*SIQEAHVLTRI Trigger: AATCCTTGTCAGCACGTGGGCTTCTTGAATACTTCAGGACATGGTCCTTTCCCCAAGTAACCACCAGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAAATGTGTTTCTCATCTTaGATCTCTCGCTCTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: ALPQRVEVSHVKNKGNPEMCFSS*ISRSSF Trigger: GAAAGAAGAGCGAGAGATCAAAGATGAGAAACACAT...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTAGCAAGGCAAGCCACTaGGAAACAACTGTTAATGGG | + |
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Preference number: 3 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFSKASH*ETTVNG Trigger: CCCATTAACAGTTGTTTCCAAGTGGCTTGCCTTGCT...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR TCA 72 bp | CAAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTaGAACTGTAGGTCCATACTGGGTGTCGTCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QNRSLRCNNIHS*NCRSILGVVSL Trigger: CAGACTGACGACACCCAGTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR TCA 72 bp | ACTTTCACCAGAGGCACAGCTATCCATTGGCAGTCTTaGGCCAAGGTCAATCTTATGAGAAGAATGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: TFTRGTAIHWQS*AKVNLMRRMLV Trigger: CACAAGCATTCTTCTCATAAGATTGACCTTGGCTCAAGACTGCCAATGGATAGCTGTGCCTCTGGTGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR-3UTR CAA 90 bp | CATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTTTAGTGGGAGCTGAGCAGGCTTaGAAGCCACCTGAATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: HIQTNVTSIQVCRPCALVGAEQA*KPPEFL Trigger: CAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCC...CACTAAAGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| 3UTR TCA 72 bp | GAACACGAAACCTGGTCAAACTCCATTACAACATCTTaGAGTAGAAACCACCCCAGTACTTGGGTGCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: EHETWSNSITTS*SRNHPSTWVLE Trigger: TTCTAGCACCCAAGTACTGGGGTGGTTTCTACTTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 72 bp | CAAAATGGCCATGTTGGGATCACTGGGTCAATACCTTaGAAAGGAACTGTAGCAGTAACTGAAATCCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QNGHVGITGSIP*KGTVAVTEIPL Trigger: AAGAGGGATTTCAGTTACTGCTACAGTTCCTTTCCAAGGTATTGACCCAGTGATCCCAACATGGCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTTGTAATTCTGTGCAGAGTGTGGCTGCCTTCATaGCTGTGGTGTTGTTTAACA | + |
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Preference number: 3 (lower is better) Translates to: LEFGIGHFSMVSFVILCRVWLPS*LWCCLT Trigger: TGTTAAACAACACCACAGCAATGAAGGCAGCCACAC...TCTGCACAGAATTACAAATGAGACCATAGAGAAATGGCCTATACCAAACTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR TCA 72 bp | CGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTTaGAATTCCGAGTGGGACACGATACAAAAACACATG | + |
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Preference number: 3 (lower is better) Translates to: RTRNLGRFLMHF*NSEWDTIQKHM Trigger: CATGTGTTTTTGTATCGTGTCCCACTCGGAATTTCAAAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR CCA 72 bp | TTTGAAATTCCGAGTGGGACACGATACAAAAACACATaGCAAAGGGCAGCTACGGAGCTCTTAAAACCTAAT | + |
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Preference number: 3 (lower is better) Translates to: FEIPSGTRYKNT*QRAATELLKPN Trigger: ATTAGGTTTTAAGAGCTCCGTAGCTGCCCTTTGCCATGTGTTTTTGTATCGTGTCCCACTCGGAATTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR GCA 72 bp | TTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATaGACTTTTGAAATTCCGAGTGGGACACGATACAAA | + |
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Preference number: 3 (lower is better) Translates to: FQNEQEIWADFS*TFEIPSGTRYK Trigger: TTTGTATCGTGTCCCACTCGGAATTTCAAAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTTGTAATTCTGTGCAGAATTTCTCATGCACTTTaGAAATTCCGAGTGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LEFGIGHFSMVSFVILCRISHAL*KFRVGH Trigger: GTGTCCCACTCGGAATTTCAAAAGTGCATGAGAAAT...TCTGCACAGAATTACAAATGAGACCATAGAGAAATGGCCTATACCAAACTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CCA 90 bp | CTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGCGAGAGCTGGGCTCCTaGATCTCCACAGAAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: LGESIPAVQMGRPCPSVWRELGS*ISTEAV Trigger: CACGGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCG...CCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | TGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGATCTCCACAGAAGCCGTaGTGGGGATGGGACGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WGRASQQCRWAGPAPACGSPQKP*WGWDAA Trigger: AGCTGCGTCCCATCCCCATCACGGCTTCTGTGGAGA...TCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR GCA 90 bp | TGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAGAACGAGAGAGGCCTTaGTGTCCAGCCCTCGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WGRASQQCRWAGPAPACGERERP*CPALAV Trigger: CACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTC...TCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CCA 90 bp | GGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCAGCTCACAGTCGGCTTaGGAGCCATTCTGGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GDLGESIPAVQMGRPCPSSSQSA*EPFWLA Trigger: GGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCT...GCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CCA 90 bp | GGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCCGGATCCGCACCGCATaGTATCGGGGAATGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GDLGESIPAVQMGRPCPSRIRTA*YRGMLS Trigger: TGACAGCATTCCCCGATACCATGCGGTGCGGATCCG...GCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATAGTGACCGAGTCTaGGAGGGAGCCCACAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LGESIPAVQMGRPCPSVWNSDRV*EGAHSK Trigger: CTTGCTGTGGGCTCCCTCTCAGACTCGGTCACTATT...CCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGGACGCAGCTTGTCTCTaGTGTTCTCCTGCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGESIPAVQMGRPCPSVWDAACL*CSPAAR Trigger: TCTGGCTGCAGGAGAACATCAGAGACAAGCTGCGTC...CCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGCCACACAGCTCAGCTaGTTCTCAGGGAAAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVEATQLS*FSGKAL Trigger: GAGGGCTTTCCCTGAGAAGCAGCTGAGCTGTGTGGC...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAAAGGTCCCCGGGAGGTaGTGTCACAGCTGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSKVPGR*CHSCTG Trigger: GCCTGTACAGCTGTGACATCACCTCCCGGGGACCTT...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGACTCCTGCTTCGTGTTaGCGTGCTGCCGTTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LGESIPAVQMGRPCPSVWTPASC*RAAVSH Trigger: ATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGT...CCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATCTGAGCAGCAGCGGTaGCATCTATGGAAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVESEQQR*HLWKPS Trigger: TGAGGGCTTCCATAGATGTCACCGCTGCTGCTCAGA...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAACTCCTGCTTCGTGTTaGCGTGCTGCCGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVETPASC*RAAVSH Trigger: ATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGT...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCTCCTCCGGCTGCAACTaGCAGTGCATGGCGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGWDSHSVSTGDLGESISSGCN*QCMASE Trigger: CTCGCTCGCCATGCACTGGCAGTTGCAGCCGGAGGA...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACACAGCTCAGCTaGTTCTCAGGGAAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSATQLS*FSGKAL Trigger: GAGGGCTTTCCCTGAGAAGCAGCTGAGCTGTGTGGC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGGGGAGCCATTCTGGTTaGCCACACAGCTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RASQQCRWAGPAPACGSQGSHSG*PHSSAA Trigger: AGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCC...CTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGTCCAGCCCTCGCAGTaGGCACCTGATGTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSVQPSQ*APDVHT Trigger: TGTGTGAACATCAGGTGCCCACTGCGAGGGCTGGAC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGGCTGCAACTGCCAGTaGATGGCGAGCGAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGGCNCQ*MASEKP Trigger: CGGCTTCTCGCTCGCCATGCACTGGCAGTTGCAGCC...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCCCGATAACAATGTCTTaGCACCCATCTGCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDLGESIPAVQMGRPCPSPITMS*HPSALR Trigger: CCTCAATGCAGATGGGTGGCAAGACATTGTTATCGG...GCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGATCCGAAGGGCTGTTaGTCACCGTTATTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVEDPKGC*SPLFPE Trigger: CTCTGGAAATAACGGTGACCAACAGCCCTTCGGATC...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGAACGAGAGAGGCCTTaGTGTCCAGCCCTCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKERERP*CPALAV Trigger: CACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTC...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGAGCCAAACTTTTCATaGCCTCTCAACCGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSEPNFS*PLNRPS Trigger: CGATGGCCGGTTGAGAGGCCATGAAAAGTTTGGCTC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGACCACACATGGACTTCTaGCGGAGGTCAATTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WGRASQQCRWAGPAPACGPHMDF*RRSILL Trigger: TAACAGAATTGACCTCCGCCAGAAGTCCATGTGTGG...TCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGCTCCTGAGTATACTTTaGCTCGGAACCTTGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GESIPAVQMGRPCPSVWKLLSIL*LGTLVS Trigger: CGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAG...CTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGCGAGAGCTGGGCTCCTaGATCTCCACAGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKRELGS*ISTEAV Trigger: CACGGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCG...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGGTCTTCCTTGCTTTCTaGCATAGGATCAGCGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GESIPAVQMGRPCPSVWKVFLAF*HRISVI Trigger: AATGACGCTGATCCTATGTCAGAAAGCAAGGAAGAC...CTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGTGACCTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCCGTTTTGGCTTCATTTaGATTCAGGATGGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GDLGESIPAVQMGRPCPSRFGFI*IQDGKN Trigger: GTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACG...GCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAGGTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATTCTTTCTTGAGTTGTaGGACTCCTTCAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVEFFLEL*DSFSFR Trigger: CCTGAAGCTGAAGGAGTCTCACAACTCAAGAAAGAA...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATTTCTCATATCGATGTaGACACGTCACCACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEHPSSADGQALPQRVEFLISM*TRHHFA Trigger: GGCAAAGTGGTGACGTGTGCACATCGATATGAGAAA...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGGGAGCCATTCTGGTTaGCCACACAGCTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKGSHSG*PHSSAA Trigger: AGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCC...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCTTGGGAGCCATTCTaGTTGGCCACACAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKAWEPF*LATQLS Trigger: GCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGC...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGAGCTCACAGTCGGCTTaGGAGCCATTCTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RWAGPAPACGSQPRQKQRSSQSA*EPFWLA Trigger: GGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCT...CCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGAATAGTGACCGAGTCTaGGAGGGAGCCCACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKNSDRV*EGAHSK Trigger: CTTGCTGTGGGCTCCCTCTCAGACTCGGTCACTATT...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGGACGCAGCTTGTCTCTaGTGTTCTCCTGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWAGPAPACGSQPRQKQRDAACL*CSPAAR Trigger: TCTGGCTGCAGGAGAACATCAGAGACAAGCTGCGTC...CCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGACAGCCCCACTGTGATTaGCTCTTGGAGCACCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LWEQAGIATLLAQVTWGRQPHCD*LLEHQT Trigger: TGTCTGGTGCTCCAAGAGCCAATCACAGTGGGGCTG...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGCTTGGCTCTGAACAGTaGCTCCCATCCACTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKLGSEQ*LPSTGL Trigger: AAGACCAGTGGATGGGAGTCACTGTTCAGAGCCAAG...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAACGAGACTTTCATCATaGTCAGTCTCTCCACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSTRLSS*SVSPPT Trigger: AGTTGGTGGAGAGACTGATCATGATGAAAGTCTCGT...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR TCA 90 bp | CCGGATCCGCACCGCATGGTATCGGGGAATGCTGTCATCGTACCTAGAGCGCTTCTGGAAACGTGGCGATaGGTTTGGCTTCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDPHRMVSGNAVIVPRALLETWR*VWLHGH Trigger: ATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAG...AAGCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGCGGTGCGGATCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR TCA 90 bp | AGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCACTGGAATTTCTCTTaGAAGGATTTCCGAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RASQQCRWAGPAPACGSQHWNFS*KDFRAH Trigger: GTGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTG...CTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGCTGAGCTACAGTCTTTaGGGGAAACACCGTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPSVWKSATSKTKAIRLSYSL*GKHRHS Trigger: CGAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAG...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGACCTCCAAAATACACCTaGGAAGGCTTAGCGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LWEQAGIATLLAQVTWGRPPKYT*EGLATP Trigger: CGGAGTCGCTAAGCCTTCGCAGGTGTATTTTGGAGG...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGATCAGATTTCATAGCTTaGTCACCAACAACTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: WGRASQQCRWAGPAPACGSDFIA*SPTTVP Trigger: AGGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGA...TCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAACACCACTTTGCCCCCTaGACCTTGGCTCTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALPQRVEVSHVKNKGNPEHHFAP*TLALNS Trigger: ACTGTTCAGAGCCAAGGTCCAGGGGGCAAAGTGGTG...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGGAGCCAAACTTTTCATaGCCTCTCAACCGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPSVWKSATSKTKAIREPNFS*PLNRPS Trigger: CGATGGCCGGTTGAGAGGCCATGAAAAGTTTGGCTC...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAACAGCCCCACTGTGATTaGCTCTTGGAGCACCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALPQRVEVSHVKNKGNPEQPHCD*LLEHQT Trigger: TGTCTGGTGCTCCAAGAGCCAATCACAGTGGGGCTG...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCACTCGAGAACCTGTGTTaGCTTGGTAATTATGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSLENLC*LGNYAS Trigger: ACTGGCATAATTACCAAGCCAACACAGGTTCTCGAG...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCACATTTGAATTCAGGATaGGAAGAACTTCGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSHLNSG*EELRGV Trigger: CACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATG...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGGAGCCAAATTATCCTaGTTGCTTGTTGTTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSGAKLS*LLVVSN Trigger: GTTGGAAACAACAAGCAATCAGGATAATTTGGCTCC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCGCTACTCCTGAATACTaGGCTACAGTCTTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGWDSHSVSTGDLGESIATPEY*ATVFEG Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCAGGAGTAGC...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCTCTTTATCAGACGGCTaGGTATGGATCTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGWDSHSVSTGDLGESISLSDG*VWISAL Trigger: CAAGGCTGAGATCCATACTCAGCCGTCTGATAAAGA...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR GCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCGGCTGCAACTGCCAGTaGATGGCGAGCGAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EIIYGGAEQALKPPEFLSGCNCQ*MASEKP Trigger: CGGCTTCTCGCTCGCCATGCACTGGCAGTTGCAGCC...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| 3UTR CAA 72 bp | GCTTTAGTGACAAGGGAGACGGGAACCTGTGTGCATTaGGCGTCAGCAAGGGTCCTCACTTCTAGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVTRETGTCVH*ASARVLTSRRW Trigger: CCATCTCCTAGAAGTGAGGACCCTTGCTGACGCCAAATGCACACAGGTTCCCGTCTCCCTTGTCACTAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGTCTTCCTTGCTTTCTaGCATAGGATCAGCGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LWEQAGIATLLAQVTWGRVFLAF*HRISVI Trigger: AATGACGCTGATCCTATGTCAGAAAGCAAGGAAGAC...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGCCTTGGTTTCGAAACTaGACTCTCGATGACAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLWEQAGIATLLAQVTWPWFRN*TLDDNP Trigger: AGGGTTGTCATCGAGAGTTCAGTTTCGAAACCAAGG...CCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGAAACGTGGCGATaGGTTTGGCTTCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDLETWR*VWLHGH Trigger: ATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAG...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGTTCTTTCTTGAGTTGTaGGACTCCTTCAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPSVWKSATSKTKAIRFFLEL*DSFSFR Trigger: CCTGAAGCTGAAGGAGTCTCACAACTCAAGAAAGAA...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGTTCCCGTTTCTTTCTTaGGTTGTGAGACTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPCPSVWKSATSKTKAIRFPFLS*VVRLLQ Trigger: CTGAAGGAGTCTCACAACTCAAGAAAGAAACGGGAA...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGAGCTACAGTCTTTaGGGGAAACACCGTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDLSYSL*GKHRHS Trigger: CGAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAG...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACCAGCGGGAGTGCTTCTaGCCGAGGTGCCCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNQRECF*PRCPHK Trigger: CTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTG...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGATTTCTCATATCGATGTaGACACGTCACCACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWEQAGIATLLAQVTWGRFLISM*TRHHFA Trigger: GGCAAAGTGGTGACGTGTGCACATCGATATGAGAAA...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGATTGAGGTCCACCACTaGCACATCATAGCCAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: ECLWEQAGIATLLAQVTWIEVHH*HIIAKR Trigger: TCGTTTGGCTATGATGTGGCAGTGGTGGACCTCAAT...CCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTGCCACACAGCTCAGCTaGTTCTCAGGGAAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APREFQNEQEIWADFSCTATQLS*FSGKAL Trigger: GAGGGCTTTCCCTGAGAAGCAGCTGAGCTGTGTGGC...AGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | GGCGCATGCTTAGCTAGCACAGGACCACGTCCAAGCGGCAGTAAGAAGCGCCCCTCAGATTTCATAGCTTaGTCACCAACAACTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GACLASTGPRPSGSKKRPSDFIA*SPTTVP Trigger: AGGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGA...GGGGCGCTTCTTACTGCCGCTTGGACGTGGTCCTGTGCTAGCTAAGCATGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTGTCCAGCCCTCGCAGTaGGCACCTGATGTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: APREFQNEQEIWADFSCTVQPSQ*APDVHT Trigger: TGTGTGAACATCAGGTGCCCACTGCGAGGGCTGGAC...AGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGCGTTTTGGCTTCATTTaGATTCAGGATGGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGRFGFI*IQDGKN Trigger: GTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACG...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCAGCGGGAGTGCTTCTaGCCGAGGTGCCCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRQRECF*PRCPHK Trigger: CTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGTCTCTGATGTTCTCCTaGAGCCAGAGGGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALSLMFS*SQRVSS Trigger: GGAGGAGACCCTCTGGCTGCAGGAGAACATCAGAGA...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGGGCTCACAAACAATCTaGTCCAAACCTTTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPCPSVWKSATSKTKAIRGSQTI*SKPLDS Trigger: TGAATCCAAAGGTTTGGAGCAGATTGTTTGTGAGCC...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTGAACGAGAGAGGCCTTaGTGTCCAGCCCTCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFERERP*CPALAV Trigger: CACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTC...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGCAGCCTTGTGATAGGTaGCATCGTAATGATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGQPCDR*HRNDLS Trigger: AGAAAGATCATTACGATGCCACCTATCACAAGGCTG...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCCTTGGTTTCGAAACTaGACTCTCGATGACAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDPWFRN*TLDDNP Trigger: AGGGTTGTCATCGAGAGTTCAGTTTCGAAACCAAGG...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | ATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCTCCTCCGGCTGCAACTaGCAGTGCATGGCGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITFYCTFKTELSPEAQLSSSGCN*QCMASE Trigger: CTCGCTCGCCATGCACTGGCAGTTGCAGCCGGAGGA...GGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCCGATAACAATGTCTTaGCACCCATCTGCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDPITMS*HPSALR Trigger: CCTCAATGCAGATGGGTGGCAAGACATTGTTATCGG...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGGGACTAATTCTGGGATaGCTTTTTGAATTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RWAGPAPACGSQPRQKQRGLILG*LFELEG Trigger: ACCTTCCAATTCAAAAAGGCATCCCAGAATTAGTCC...CCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGTTCAATAACCACTTTTaGCTTCGCTGTAATTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMGRPCPSVWKSATSKTKFNNHF*LRCNWS Trigger: GCTCCAATTACAGCGAAGGCAAAAGTGGTTATTGAA...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAAATTCCTCTAGAAATGTaGTGTTCCACAACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALPQRVEVSHVKNKGNPEIPLEM*CSTTWN Trigger: GTTCCAGGTTGTGGAACAGCACATTTCTAGAGGAAT...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGATCTCTCGCTCTTCTTTCCGGATCCGCACCGCATGGTATCGGGGAATGATCCGAAGGGCTGTTaGTCACCGTTATTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFDLSLFFPDPHRMVSGNDPKGC*SPLFPE Trigger: CTCTGGAAATAACGGTGACCAACAGCCCTTCGGATC...ATTCCCCGATACCATGCGGTGCGGATCCGGAAAGAAGAGCGAGAGATCAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCGTTTATTTCATTGTGTaGCTCACAAACAATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAGWDSHSVSTGDLGESIVYFIV*LTNNLL Trigger: GAGCAGATTGTTTGTGAGCCACACAATGAAATAAAC...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGAAGGTCCCCGGGAGGTaGTGTCACAGCTGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRKVPGR*CHSCTG Trigger: GCCTGTACAGCTGTGACATCACCTCCCGGGGACCTT...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATCTGAGCAGCAGCGGTaGCATCTATGGAAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSQMSLEFGIGHFSMVSSEQQR*HLWKPS Trigger: TGAGGGCTTCCATAGATGTCACCGCTGCTGCTCAGA...TGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTGGGATTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTCGCTTGTCCTCCGGCTaGAACTGCCAGTGCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TFYCTFKTELSPEAQLSIRLSSG*NCQCMA Trigger: CGCCATGCACTGGCAGTTGCAGCCGGAGGACAAGCG...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTTCTCTGATGTTCTCCTaGAGCCAGAGGGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFSLMFS*SQRVSS Trigger: GGAGGAGACCCTCTGGCTGCAGGAGAACATCAGAGA...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACGCTTGGGAGCCATTCTaGTTGGCCACACAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNAWEPF*LATQLS Trigger: GCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGC...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CCACAACCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAAGCTCACAGTCGGCTTaGGAGCCATTCTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQPQQVPKLAMKNIDQLPSSQSA*EPFWLA Trigger: GGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCT...TGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGGTTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGTCTCCACAGAAGCCGTaGTGGGGATGGGACGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRVTSPSIAHLRQNFHQRSPQKP*WGWDAA Trigger: AGCTGCGTCCCATCCCCATCACGGCTTCTGTGGAGA...CCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGTCTCCACAGAAGCCGTaGTGGGGATGGGACGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMSPQKP*WGWDAA Trigger: AGCTGCGTCCCATCCCCATCACGGCTTCTGTGGAGA...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTCTGAGCTACAGTCTTTaGGGGAAACACCGTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFLSYSL*GKHRHS Trigger: CGAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAG...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | TGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTCCACCAAGCTACTCCTaGATACTGAGCTACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRQSEIIYGGAEQALKPPPPSYS*ILSYSL Trigger: AAGACTGTAGCTCAGTATTCAGGAGTAGCTTGGTGG...AGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACTCTCTGATGTTCTCCTaGAGCCAGAGGGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNSLMFS*SQRVSS Trigger: GGAGGAGACCCTCTGGCTGCAGGAGAACATCAGAGA...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAACTCCTGAGTATACTTTaGCTCGGAACCTTGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQSEIIYGGAEQALKPPELLSIL*LGTLVS Trigger: CGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAG...TTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGGAAAGAAAAGGGAATTGACAATAGTTCCTGTTTCCATGGGTTTATACGAGAGCTGGGCTCCTaGATCTCCACAGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGKEKGIDNSSCFHGFIRELGS*ISTEAV Trigger: CACGGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCG...TATAAACCCATGGAAACAGGAACTATTGTCAATTCCCTTTTCTTTCCCATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGATGCCTTTTTGAATTaGAAGGTAAGAGAATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGDAFLN*KVREFV Trigger: GACAAATTCTCTTACCTTCCAATTCAAAAAGGCATC...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTACGGAGCTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATGATCCGAAGGGCTGTTaGTCACCGTTATTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AATELLKPNQTNQCGCLHDPKGC*SPLFPE Trigger: CTCTGGAAATAACGGTGACCAACAGCCCTTCGGATC...ATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAGCTCCGTAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGTTTATTTCATTGTGTaGCTCACAAACAATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECLWEQAGIATLLAQVTWVYFIV*LTNNLL Trigger: GAGCAGATTGTTTGTGAGCCACACAATGAAATAAAC...CCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAAACGAGACTTTCATCATaGTCAGTCTCTCCACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RQSEIIYGGAEQALKPPETRLSS*SVSPPT Trigger: AGTTGGTGGAGAGACTGATCATGATGAAAGTCTCGT...TTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTCACTGGAATTTCTCTTaGAAGGATTTCCGAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: APREFQNEQEIWADFSCTHWNFS*KDFRAH Trigger: GTGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTG...AGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGTATCGGGGAATGCTGTCATCGTACCTAGAGCGCTTAAAGAATCCACACCTGTGGTGTCAAAGGTaGCCTCGGTTGTACTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AWYRGMLSSYLERLKNPHLWCQR*PRLYLK Trigger: TTTTAAGTACAACCGAGGTCACCTTTGACACCACAG...GTGTGGATTCTTTAAGCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTCGCTCTGTGGTGTCAAAGGTaGCCTCGGTTGTACTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQATWKQLLMGQTQQAVALWCQR*PRLYLK Trigger: TTTTAAGTACAACCGAGGTCACCTTTGACACCACAG...AGCGACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGTTCCCGTTTCTTTCTTaGGTTGTGAGACTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALFPFLS*VVRLLQ Trigger: CTGAAGGAGTCTCACAACTCAAGAAAGAAACGGGAA...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTGCTACTCCTGAATACTaGGCTACAGTCTTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKASHLETTVNGTDTASCATPEY*ATVFEG Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCAGGAGTAGC...ACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCCCACCAAGCTACTCCTaGATACTGAGCTACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIIYGGAEQALKPPEFLSPPSYS*ILSYSL Trigger: AAGACTGTAGCTCAGTATTCAGGAGTAGCTTGGTGG...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAACCAAATTATCCTGATTaGTTGTTGTTTCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPQRVEVSHVKNKGNPEPNYPD*LLFPTS Trigger: TGAAGTTGGAAACAACAAGCAATCAGGATAATTTGG...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCACCACTTTGCCCCCTaGACCTTGGCTCTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRHHFAP*TLALNS Trigger: ACTGTTCAGAGCCAAGGTCCAGGGGGCAAAGTGGTG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGCTCGAGAACCTGTGTTaGCTTGGTAATTATGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALLENLC*LGNYAS Trigger: ACTGGCATAATTACCAAGCCAACACAGGTTCTCGAG...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCATGAGTTTGGCTTCATaGGCATCGTCGCCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIIYGGAEQALKPPEFLSMSLAS*ASSPSF Trigger: GAAAGATGGCGACGATGCCCATGAAGCCAAACTCAT...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGGGCTAAGAACACGAAACCTGGTCAAACTCCATTACAACATCTTGAAGGGAGCCATTCTGGTTaGCCACACAGCTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKGAKNTKPGQTPLQHLEGSHSG*PHSSAA Trigger: AGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCC...TTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTCTTAGCCCCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTGTCCAGCCCTCGCAGTaGGCACCTGATGTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: TFYCTFKTELSPEAQLSIVQPSQ*APDVHT Trigger: TGTGTGAACATCAGGTGCCCACTGCGAGGGCTGGAC...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTCCTTGGTTTCGAAACTaGACTCTCGATGACAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFPWFRN*TLDDNP Trigger: AGGGTTGTCATCGAGAGTTCAGTTTCGAAACCAAGG...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | GCCCATGGGAAAGAAAAGGGAATTGACAATAGTTCCTGTTTCCATGGGTTTATAGACGCAGCTTGTCTCTaGTGTTCTCCTGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHGKEKGIDNSSCFHGFIDAACL*CSPAAR Trigger: TCTGGCTGCAGGAGAACATCAGAGACAAGCTGCGTC...TATAAACCCATGGAAACAGGAACTATTGTCAATTCCCTTTTCTTTCCCATGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTACGGAGCTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTTCTTTCTTGAGTTGTaGGACTCCTTCAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AATELLKPNQTNQCGCLHFFLEL*DSFSFR Trigger: CCTGAAGCTGAAGGAGTCTCACAACTCAAGAAAGAA...ATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAGCTCCGTAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTGAAACTGTAGGTCCATACTCTGAGCAGCAGCGGTaGCATCTATGGAAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTGALGVTISTVETVGPYSEQQR*HLWKPS Trigger: TGAGGGCTTCCATAGATGTCACCGCTGCTGCTCAGA...GTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | TGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGGCTCACAAACAATCTaGTCCAAACCTTTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRQSEIIYGGAEQALKPPGSQTI*SKPLDS Trigger: TGAATCCAAAGGTTTGGAGCAGATTGTTTGTGAGCC...AGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAAATTCCTCTAGAAATGTaGTGTTCCACAACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQSEIIYGGAEQALKPPEIPLEM*CSTTWN Trigger: GTTCCAGGTTGTGGAACAGCACATTTCTAGAGGAAT...TTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCACTGTGATTGGCTCTTaGAGCACCAGACACAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIIYGGAEQALKPPEFLSTVIGS*STRHKS Trigger: ACTTTTGTGTCTGGTGCTCCAAGAGCCAATCACAGT...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTCCTTCCTTTAAGAAGTaGACATCTGTCTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKASHLETTVNGTDTASCPSFKK*TSVWTV Trigger: AACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGG...ACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGGAATGCTGTCATCGTACCTAGAGCGCTTAAAGAATCCACACAATTATGGATGAGTTTGGCTTCATaGGCATCGTCGCCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNAVIVPRALKESTQLWMSLAS*ASSPSF Trigger: GAAAGATGGCGACGATGCCCATGAAGCCAAACTCAT...CCATAATTGTGTGGATTCTTTAAGCGCTCTAGGTACGATGACAGCATTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR CCA 90 bp | ACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCAACGCTTGGGAGCCATTCTaGTTGGCCACACAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THLQQKILCATTNNIIINAWEPF*LATQLS Trigger: GCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGC...GTTGATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTTGTAATTAATAGTGACCGAGTCTaGGAGGGAGCCCACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMSLEFGIGHFSMVSFVINSDRV*EGAHSK Trigger: CTTGCTGTGGGCTCCCTCTCAGACTCGGTCACTATT...AATTACAAATGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGCTGGAAACGTGGCGATaGGTTTGGCTTCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMLETWR*VWLHGH Trigger: ATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAG...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGTACTCAGGGAGCAGATaGGCGGACTTCATGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQRVTSPSIAHLRQNFHQYSGSR*ADFMSL Trigger: AAGAGACATGAAGTCCGCGCATCTGCTCCCTGAGTA...CTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTCCTCCAAAATACACCTaGGAAGGCTTAGCGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFYCTFKTELSPEAQLSIPPKYT*EGLATP Trigger: CGGAGTCGCTAAGCCTTCGCAGGTGTATTTTGGAGG...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGCCTCCAAAATACACCTaGGAAGGCTTAGCGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMPPKYT*EGLATP Trigger: CGGAGTCGCTAAGCCTTCGCAGGTGTATTTTGGAGG...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | GCATGGTATCGGGGAATGCTGTCATCGTACCTAGAGCGCTTAAAGAATCCACACCTGTATATTCAAGGTTaGTGTGCCGAGGTTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AWYRGMLSSYLERLKNPHLYIQG*CAEVFK Trigger: CTTAAAAACCTCGGCACAGCAACCTTGAATATACAG...GTGTGGATTCTTTAAGCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR GCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGCTGTATATTCAAGGTTaGTGTGCCGAGGTTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALLYIQG*CAEVFK Trigger: CTTAAAAACCTCGGCACAGCAACCTTGAATATACAG...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTACGGAGCTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATATTCCTCTAGAAATGTaGTGTTCCACAACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AATELLKPNQTNQCGCLHIPLEM*CSTTWN Trigger: GTTCCAGGTTGTGGAACAGCACATTTCTAGAGGAAT...ATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAGCTCCGTAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGCCTATCAAAATACTGTaGAGCTCCGATAACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALPIKIL*SSDNNV Trigger: GACATTGTTATCGGAGCTCCACAGTATTTTGATAGG...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGTTTAACCTCCTGAGTATACTTTaGCTCGGAACCTTGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQTSVAAFIAVVLFNLLSIL*LGTLVS Trigger: CGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAG...GTTAAACAACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | AACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGTTTAACATGAGTTTGGCTTCATaGGCATCGTCGCCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQTSVAAFIAVVLFNMSLAS*ASSPSF Trigger: GAAAGATGGCGACGATGCCCATGAAGCCAAACTCAT...GTTAAACAACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | CATACTGGGTGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGTGCCTTCGCTGTAATTaGAGCCAAATTATCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HTGCRQSEIIYGGAEQALCLRCN*SQIILI Trigger: AATCAGGATAATTTGGCTCCAATTACAGCGAAGGCA...CAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACACCCAGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAGGCAAGGCAAAAATCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCTGTATATTCAAGGTTaGTGTGCCGAGGTTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQGKAKIPIPNEPGVWYRLYIQG*CAEVFK Trigger: CTTAAAAACCTCGGCACAGCAACCTTGAATATACAG...CCTATACCAAACTCCAGGCTCATTTGGGATTGGGATTTTTGCCTTGCCTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| 3UTR CAA 72 bp | AACTTTCACCAGAGGCACAGCTATCCATTGGCAGTCTaGAGCCAAGGTCAATCTTATGAGAAGAATGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFHQRHSYPLAV*SQGQSYEKNAC Trigger: ACAAGCATTCTTCTCATAAGATTGACCTTGGCTCAAGACTGCCAATGGATAGCTGTGCCTCTGGTGAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGTTTAACCGTTTTGGCTTCATTTaGATTCAGGATGGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQTSVAAFIAVVLFNRFGFI*IQDGKN Trigger: GTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACG...GTTAAACAACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCACTGGAATTTCTCTTaGAAGGATTTCCGAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRHWNFS*KDFRAH Trigger: GTGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCTGTGGTGTCAAAGGTaGCCTCGGTTGTACTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRLWCQR*PRLYLK Trigger: TTTTAAGTACAACCGAGGTCACCTTTGACACCACAG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | CCACAACCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAGGAGCCAAATTATCCTaGTTGCTTGTTGTTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPQQVPKLAMKNIDQLPGAKLS*LLVVSN Trigger: GTTGGAAACAACAAGCAATCAGGATAATTTGGCTCC...TGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGGTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTGCTACTCCTGAATACTaGGCTACAGTCTTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFYCTFKTELSPEAQLSIATPEY*ATVFEG Trigger: TCCCTCAAAGACTGTAGCTCAGTATTCAGGAGTAGC...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGGGGCTAAGAACACGAAACCTGGTCAAACTCCATTACAACATCTTGAATCTTTATCAGACGGCTaGGTATGGATCTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKGAKNTKPGQTPLQHLESLSDG*VWISAL Trigger: CAAGGCTGAGATCCATACTCAGCCGTCTGATAAAGA...TTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTCTTAGCCCCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | CATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTTTAGTGTACTCAGGGAGCAGATaGGCGGACTTCATGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIQTNVTSIQVCRPCALVYSGSR*ADFMSL Trigger: AAGAGACATGAAGTCCGCGCATCTGCTCCCTGAGTA...CACTAAAGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTATTGAGGTCCACCACTaGCACATCATAGCCAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: TFYCTFKTELSPEAQLSIIEVHH*HIIAKR Trigger: TCGTTTGGCTATGATGTGGCAGTGGTGGACCTCAAT...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CCACAACCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCACTGTCTGGACCGTTTTaGCTTCATTTGAATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQPQQVPKLAMKNIDQLPLSGPF*LHLNSG Trigger: TCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAG...TGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGGTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGTTCCCGTTTCTTTCTTaGGTTGTGAGACTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMFPFLS*VVRLLQ Trigger: CTGAAGGAGTCTCACAACTCAAGAAAGAAACGGGAA...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | ACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCAACCCACCAAGCTACTCCTaGATACTGAGCTACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: THLQQKILCATTNNIIINPPSYS*ILSYSL Trigger: AAGACTGTAGCTCAGTATTCAGGAGTAGCTTGGTGG...GTTGATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACGGACTAATTCTGGGATaGCTTTTTGAATTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNGLILG*LFELEG Trigger: ACCTTCCAATTCAAAAAGGCATCCCAGAATTAGTCC...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGTTTAACGGACTAATTCTGGGATaGCTTTTTGAATTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQTSVAAFIAVVLFNGLILG*LFELEG Trigger: ACCTTCCAATTCAAAAAGGCATCCCAGAATTAGTCC...GTTAAACAACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACTTCAATAACCACTTTTaGCTTCGCTGTAATTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNFNNHF*LRCNWS Trigger: GCTCCAATTACAGCGAAGGCAAAAGTGGTTATTGAA...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACCCTATCAAAATACTGTaGAGCTCCGATAACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: STLPVLNLAVQNRSLRCNPIKIL*SSDNNV Trigger: GACATTGTTATCGGAGCTCCACAGTATTTTGATAGG...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTTTAGTGCCACACATGGACTTCTaGCGGAGGTCAATTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HIQTNVTSIQVCRPCALVPHMDF*RRSILL Trigger: TAACAGAATTGACCTCCGCCAGAAGTCCATGTGTGG...CACTAAAGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGCATTTGAATTCAGGATaGGAAGAACTTCGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMHLNSG*EELRGV Trigger: CACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATG...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCTGTCTGGACCGTTTTaGCTTCATTTGAATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRLSGPF*LHLNSG Trigger: TCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCGATGCCTTTTTGAATTaGAAGGTAAGAGAATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIIYGGAEQALKPPEFLSDAFLN*KVREFV Trigger: GACAAATTCTCTTACCTTCCAATTCAAAAAGGCATC...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CCACAACCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCATGCCTTCGCTGTAATTaGAGCCAAATTATCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PQPQQVPKLAMKNIDQLPCLRCN*SQIILI Trigger: AATCAGGATAATTTGGCTCCAATTACAGCGAAGGCA...TGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGGTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| 3UTR CAA 72 bp | ACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTaGAAATTCCGAGTGGGACACGATACAAAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: TNKKSGPISHAL*KFRVGHDTKTH Trigger: ATGTGTTTTTGTATCGTGTCCCACTCGGAATTTCAAAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGGGAGCCAAATTATCCTaGTTGCTTGTTGTTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRVTSPSIAHLRQNFHQRGAKLS*LLVVSN Trigger: GTTGGAAACAACAAGCAATCAGGATAATTTGGCTCC...CCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTCAGATTTCATAGCTTaGTCACCAACAACTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRSDFIA*SPTTVP Trigger: AGGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGA...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGGGGCTAAGAACACGAAACCTGGTCAAACTCCATTACAACATCTTGAAGGCTCACAAACAATCTaGTCCAAACCTTTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKGAKNTKPGQTPLQHLEGSQTI*SKPLDS Trigger: TGAATCCAAAGGTTTGGAGCAGATTGTTTGTGAGCC...TTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTCTTAGCCCCTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | CATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTTTAGTGCCTTCCTTTAAGAAGTaGACATCTGTCTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HIQTNVTSIQVCRPCALVPSFKK*TSVWTV Trigger: AACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGG...CACTAAAGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR GCA 90 bp | AACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGTTTAACCCAAATTATCCTGATTaGTTGTTGTTTCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLIRQTSVAAFIAVVLFNPNYPD*LLFPTS Trigger: TGAAGTTGGAAACAACAAGCAATCAGGATAATTTGG...GTTAAACAACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | GCCCATGGGAAAGAAAAGGGAATTGACAATAGTTCCTGTTTCCATGGGTTTATATTCAATAACCACTTTTaGCTTCGCTGTAATTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHGKEKGIDNSSCFHGFIFNNHF*LRCNWS Trigger: GCTCCAATTACAGCGAAGGCAAAAGTGGTTATTGAA...TATAAACCCATGGAAACAGGAACTATTGTCAATTCCCTTTTCTTTCCCATGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | AATAACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCCACACATGGACTTCTaGCGGAGGTCAATTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NNSPATEDSLCNNKQHHHPHMDF*RRSILL Trigger: TAACAGAATTGACCTCCGCCAGAAGTCCATGTGTGG...ATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | CATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTTTAGTGCTGTCTGGACCGTTTTaGCTTCATTTGAATTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HIQTNVTSIQVCRPCALVLSGPF*LHLNSG Trigger: TCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAG...CACTAAAGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGTGCCTTCGCTGTAATTaGAGCCAAATTATCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRVTSPSIAHLRQNFHQRCLRCN*SQIILI Trigger: AATCAGGATAATTTGGCTCCAATTACAGCGAAGGCA...CCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | ACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCAACCAGCCTTGTGATAGGTaGCATCGTAATGATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THLQQKILCATTNNIIINQPCDR*HRNDLS Trigger: AGAAAGATCATTACGATGCCACCTATCACAAGGCTG...GTTGATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| 3UTR CAA 72 bp | AAAATGCAGTTGAAATGTACAATCAAAATGGCCATGTaGGGATCACTGGGTCAATACCTTGGAAAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KMQLKCTIKMAM*GSLGQYLGKEL Trigger: CAGTTCCTTTCCAAGGTATTGACCCAGTGATCCCAACATGGCCATTTTGATTGTACATTTCAACTGCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAATCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGCCAAATTATCCTGATTaGTTGTTGTTTCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKSTLPVLNLAVQNRSLRPNYPD*LLFPTS Trigger: TGAAGTTGGAAACAACAAGCAATCAGGATAATTTGG...CCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AATAACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCTCGAGAACCTGTGTTaGCTTGGTAATTATGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNSPATEDSLCNNKQHHHLENLC*LGNYAS Trigger: ACTGGCATAATTACCAAGCCAACACAGGTTCTCGAG...ATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTTGTAATTCTGTGCAGAGTTTATTTCATTGTGTaGCTCACAAACAATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEFGIGHFSMVSFVILCRVYFIV*LTNNLL Trigger: GAGCAGATTGTTTGTGAGCCACACAATGAAATAAAC...TCTGCACAGAATTACAAATGAGACCATAGAGAAATGGCCTATACCAAACTCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| 3UTR CAA 72 bp | GCAGTTAAAGAAAAATCCACTCTACCAGTCTTAAATTaGGCTGTGCAAAACAGGAGCCTTAGGTGTAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVKEKSTLPVLN*AVQNRSLRCNN Trigger: ATTGTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGATTTTTCTTTAACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGGGCTAAGAACACGAAACCTGGTCAAACTCCATTACAACATCTTGAAGATGCCTTTTTGAATTaGAAGGTAAGAGAATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKGAKNTKPGQTPLQHLEDAFLN*KVREFV Trigger: GACAAATTCTCTTACCTTCCAATTCAAAAAGGCATC...TTCAAGATGTTGTAATGGAGTTTGACCAGGTTTCGTGTTCTTAGCCCCTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGGAGCTCACAGTCGGCTaGGGAGCCATTCTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGESIPAVQMGRPCPSVWELTVG*GAILVG Trigger: GCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTC...CCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS GCA 90 bp | ACAGCTGTACAGGCCCCCTGTTCTGTTCGCCCTCTGCAGCGGGAGTaGTTCTGCCCGAGGTGCCCCCACAAGCAACAGCCGCTTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAVQAPCSVRPLQRE*FCPRCPHKQQPLVL Trigger: GAGGACAAGCGGCTGTTGCTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTGCAGAGGGCGAACAGAACAGGGGGCCTGTACAGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS TCA 90 bp | GATCCCCCGATTTCCGGATCACGTTGTCCTCGCGGGTGTCCAGGTTaGAGGCTGTACCCAGCCGGGCTAGAAGCCCCGCGGACAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DPPISGSRCPRGCPG*RLYPAGLEAPRTGR Trigger: TCTACCTGTCCGCGGGGCTTCTAGCCCGGCTGGGTACAGCCTTCAACCTGGACACCCGCGAGGACAACGTGATCCGGAAATCGGGGGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS GCA 90 bp | GAGGTGATGTCACAGCTGTACAGGCCCCCTGTTCTGTTCGCCCTCTaGAGCGGGAGTGCTTCTGCCCGAGGTGCCCCCACAAGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVMSQLYRPPVLFAL*SGSASARGAPTSNS Trigger: GCTGTTGCTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTGCAGAGGGCGAACAGAACAGGGGGCCTGTACAGCTGTGACATCACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCTCGCGGGTGTCCAGGTaGAAGGCTGTACCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGWDSHSVSTGDLGESISRVSR*KAVPSR Trigger: CCGGCTGGGTACAGCCTTCAACCTGGACACCCGCGA...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAAGAACGAGAGAGGCCTaGCTGTCCAGCCCTCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSRTREA*LSSPRS Trigger: ACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCT...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS CCA 90 bp | AGAACTTCGGGGAGTGAGTTCACCCGCCGGCGAGAGCTGGGCTCCTaGATCTCCACAGAAGCCGTGATGGGGATGGGACGCAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTSGSEFTRRRELGS*ISTEAVMGMGRSLS Trigger: AGACAAGCTGCGTCCCATCCCCATCACGGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCGCCGGCGGGTGAACTCACTCCCCGAAGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCGATTTCCGGATCACGTaGTCCTCGCGGGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGWDSHSVSTGDLGESIDFRIT*SSRVSR Trigger: CCTGGACACCCGCGAGGACAACGTGATCCGGAAATC...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGCACACGTCACCACTTaGCCCCCTGGACCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGAHVTT*PPGPWL Trigger: GAGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGC...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATTGCTGTTACAGACATaGTCGTCTCCACATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEHPSSADGQALPQRVELLLQT*SSPHPS Trigger: GGAAGGATGTGGAGACGACAATGTCTGTAACAGCAA...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGGAGCTCACAGTCGGCTaGGGAGCCATTCTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWAGPAPACGSQPRQKQRELTVG*GAILVG Trigger: GCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTC...CCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS CCA 90 bp | CCTGGAACGAAGAACGAGAGAGGCCTTGCTGTCCAGCCCTCGCAGTaGGCACCTGATGTTCACACACCTCACGTTGACGCTGCAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTKNERGLAVQPSQ*APDVHTPHVDAAVE Trigger: CTCAACTGCAGCGTCAACGTGAGGTGTGTGAACATCAGGTGCCCACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCTTCGTTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCTCCTGAGTATACTTaGGCTCGGAACCTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSAPEYT*ARNLGF Trigger: GAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAACCATTGCTAATCTCCTaGGGCCACTGTATATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGEHPSSADGQALPQRVEPLLIS*GHCIFK Trigger: CTTGAATATACAGTGGCCCAAGGAGATTAGCAATGG...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAACGTTGACGCTGCAGTaGAGAGTCTGGTATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGRASQQCRWAGPAPACGTLTLQ*RVWYFL Trigger: AAGAAAATACCAGACTCTCAACTGCAGCGTCAACGT...TCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAACACTGGAATTTCTCTaGAAAGGATTTCCGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEHPSSADGQALPQRVETLEFL*KGFPSS Trigger: TGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTGT...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAATTCAGATTTCATAGCTaGCTCACCAACAACTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GGEHPSSADGQALPQRVEFRFHS*LTNNCT Trigger: GGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGAA...TTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCACTGAGCTACAGTCTTaGAGGGAAACACCGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GAGWDSHSVSTGDLGESITELQS*RETPSL Trigger: GAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAGT...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS CCA 90 bp | CTCTTGAAAGGATTTCCGAGCTCACAGTCGGCTTGGGAGCCATTCTaGTTGGCCACACAGCTCAGCTGCTTCTCAGGGAAAGCCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLKGFPSSQSAWEPF*LATQLSCFSGKALS Trigger: ACTGAGGGCTTTCCCTGAGAAGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAAATCCTTTCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCTCGCGGGTGTCCAGGTaGAAGGCTGTACCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EIIYGGAEQALKPPEFLSSRVSR*KAVPSR Trigger: CCGGCTGGGTACAGCCTTCAACCTGGACACCCGCGA...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCTCCTGAGTATACTTaGGCTCGGAACCTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QMGRPCPSVWKSATSKTKAPEYT*ARNLGF Trigger: GAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGC...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCGTTTTGGCTTCATTaGAATTCAGGATGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RASQQCRWAGPAPACGSQPFWLH*NSGWEE Trigger: TTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGG...CTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCATCCCAGCAGTGCAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGTAAGAGAATTTGTCTaGATTTCCTTCTCGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: ESIPAVQMGRPCPSVWKSVREFV*ISFSGT Trigger: GGTACCCGAGAAGGAAATCAAGACAAATTCTCTTAC...TGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTGCACTGCTGGGATGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | CAGATGGGCAGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGAGCAACCATTTGCCATaGCTAATCTCCTTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QMGRPCPSVWKSATSKTKSNHLP*LISLGH Trigger: GTGGCCCAAGGAGATTAGCAATGGCAAATGGTTGCT...CTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCTGCCCATCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGACTGAGCTACAGTCTTaGAGGGAAACACCGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RPCPSVWKSATSKTKAIRTELQS*RETPSL Trigger: GAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAGT...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS TCA 90 bp | CAGCGTCATTATCAAATTCAATCCGTGTACAAGGTCCCCGGGAGGTaGTGTCACAGCTGTACAGGCCCCCTGTTCTGTTCGCCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRHYQIQSVYKVPGR*CHSCTGPLFCSPSA Trigger: TGCAGAGGGCGAACAGAACAGGGGGCCTGTACAGCTGTGACATCACCTCCCGGGGACCTTGTACACGGATTGAATTTGATAATGACGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | CTGCCGTTTCTCATATCGATGTGCACACGTCACCACTTTGCCCCCTaGACCTTGGCTCTGAACAGTGACTCCCATCCACTGGTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPFLISMCTRHHFAP*TLALNSDSHPLVFL Trigger: AAGGAAGACCAGTGGATGGGAGTCACTGTTCAGAGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGCACATCGATATGAGAAACGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS CCA 90 bp | AGTGGACATCTGTCTGGACCGTTTTGGCTTCATTTGAATTCAGGATaGGAAGAACTTCGGGGAGTGAGTTCACCCGCCGGCGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGHLSGPFWLHLNSG*EELRGVSSPAGESW Trigger: CCAGCTCTCGCCGGCGGGTGAACTCACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCATCCACTGGTCTTCCTaGCTTTCTGACATAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGWDSHSVSTGDLGESIIHWSS*LSDIGS Trigger: TGATCCTATGTCAGAAAGCAAGGAAGACCAGTGGAT...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTCGCTGAGCTCACAGTCGGCTaGGGAGCCATTCTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQATWKQLLMGQTQQAVAELTVG*GAILVG Trigger: GCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTC...AGCGACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGAGAACGAGAGAGGCCTaGCTGTCCAGCCCTCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCPQGIPKRTRNLGRFLMRTREA*LSSPRS Trigger: ACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCT...CATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGGGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS TCA 90 bp | AAGGTCGGGGTAGGAATTCCGATCCAGGTCCATATTCCCAGCGATTaGATAGCCGAAGTAAGGCGATGTCCCCTCGAGAACCTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGVGIPIQVHIPSD*IAEVRRCPLENLCW Trigger: CCAACACAGGTTCTCGAGGGGACATCGCCTTACTTCGGCTATTCAATCGCTGGGAATATGGACCTGGATCGGAATTCCTACCCCGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 90 bp | CATCTTCCAAAGATATCCCGCGACTCCTGCTTCGTGTTGACGTGCTaGCGTTTCTCATATCGATGTGCACACGTCACCACTTTGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLPKISRDSCFVLTC*RFSYRCAHVTTLPP Trigger: AGGGGGCAAAGTGGTGACGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTTTGGAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | GAATATGTCAGAGTGTCTGGAAACGTGGCGATGAGTTTGGCTTCATaGGCATCGTCGCCATCTTTCCGGGGATTCCTTGGATCCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EYVRVSGNVAMSLAS*ASSPSFRGFLGSEG Trigger: CCCTTCGGATCCAAGGAATCCCCGGAAAGATGGCGACGATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAGACACTCTGACATATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | ACACTGGAATTTCTCTTGAAAGGATTTCCGAGCTCACAGTCGGCTTaGGAGCCATTCTGGTTGGCCACACAGCTCAGCTGCTTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLEFLLKGFPSSQSA*EPFWLATQLSCFSG Trigger: CCCTGAGAAGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGAACTTTGGCTCGGAACCTaGGTTTCGAAACTGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALPQRVEVSHVKNKGNPELWLGT*VSKLNS Trigger: AGAGTTCAGTTTCGAAACCAAGGTTCCGAGCCAAAG...TTCCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | GGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGCATCCCGTTTTGGCTTCATTaGAATTCAGGATGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGWDSHSVSTGDLGESIPFWLH*NSGWEE Trigger: TTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGG...GATGCTCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | GAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGTTGCTGTTACAGACATaGTCGTCTCCACATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ECLWEQAGIATLLAQVTWLLLQT*SSPHPS Trigger: GGAAGGATGTGGAGACGACAATGTCTGTAACAGCAA...CCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGACCATTGCTAATCTCCTaGGGCCACTGTATATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LWEQAGIATLLAQVTWGRPLLIS*GHCIFK Trigger: CTTGAATATACAGTGGCCCAAGGAGATTAGCAATGG...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | CCGGATCCGCACCGCATGGTATCGGGGAATGCTGTCATCGTACCTAGAGCGCTTACGTTGACGCTGCAGTaGAGAGTCTGGTATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PDPHRMVSGNAVIVPRALTLTLQ*RVWYFL Trigger: AAGAAAATACCAGACTCTCAACTGCAGCGTCAACGT...AAGCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGCGGTGCGGATCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
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| CDS TCA 90 bp | GTTCTCTGTAAGCGGAATATGTCAGAGTGTCTGGAAACGTGGCGATaGGTTTGGCTTCATGGGCATCGTCGCCATCTTTCCGGGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLCKRNMSECLETWR*VWLHGHRRHLSGDS Trigger: GGAATCCCCGGAAAGATGGCGACGATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAGACACTCTGACATATTCCGCTTACAGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 90 bp | TCCGATAACAATGTCTTGCCACCCATCTGCATTGAGGTCCACCACTaGCACATCATAGCCAAACGAGGAAGCCAGGCCTTCTCCGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDNNVLPPICIEVHH*HIIAKRGSQAFSVK Trigger: TTTGACGGAGAAGGCCTGGCTTCCTCGTTTGGCTATGATGTGGCAGTGGTGGACCTCAATGCAGATGGGTGGCAAGACATTGTTATCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | GAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTGAATTTCTGAGCTTTGCCCCCTGGACCTaGGCTCTGAACAGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIIYGGAEQALKPPEFLSFAPWT*ALNSDS Trigger: GGAGTCACTGTTCAGAGCCAAGGTCCAGGGGGCAAA...GCTCAGAAATTCAGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | TTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGGAGAGTAAGAGAATTTGTCTaGATTTCCTTCTCGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LWEQAGIATLLAQVTWGRVREFV*ISFSGT Trigger: GGTACCCGAGAAGGAAATCAAGACAAATTCTCTTAC...TCTCCCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGAAAAGTGTTATTCTTTaGTTCTACACGGACGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGKSVIL*FYTDDP Trigger: GGGATCGTCCGTGTAGAACAAAAGAATAACACTTTT...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | ATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACCTGGGGTTCTGGGATGCCTTTTaGAATTGGAAGGTAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MLVGAGWDSHSVSTGDLGFWDAF*NWKVRE Trigger: TTCTCTTACCTTCCAATTCAAAAAGGCATCCCAGAA...CCCCAGGTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS TCA 90 bp | GGACATAACATCTTCCAAAGATATCCCGCGACTCCTGCTTCGTGTTaGCGTGCTGCCGTTTCTCATATCGATGTGCACACGTCACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GHNIFQRYPATPASC*RAAVSHIDVHTSPL Trigger: AAGTGGTGACGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTTTGGAAGATGTTATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | GACGTAAACTGCACCCCCGACTTCACCATCCCTATCAAAATACTGTaGAGCTCCGATAACAATGTCTTGCCACCCATCTGCATTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVNCTPDFTIPIKIL*SSDNNVLPPICIEV Trigger: GACCTCAATGCAGATGGGTGGCAAGACATTGTTATCGGAGCTCCACAGTATTTTGATAGGGATGGTGAAGTCGGGGGTGCAGTTTACGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | AGTTCAGTTTGGAATATTCCTCTAGAAATGTGCTGTTCCACAACCTaGAACGAAGAACGAGAGAGGCCTTGCTGTCCAGCCCTCGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSVWNIPLEMCCSTT*NEERERPCCPALAV Trigger: CACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCTTCGTTCCAGGTTGTGGAACAGCACATTTCTAGAGGAATATTCCAAACTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGGCACACGTCACCACTTaGCCCCCTGGACCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRVTSPSIAHLRQNFHQRAHVTT*PPGPWL Trigger: GAGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGC...CCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTGCCCCAGCGTGTGGAAGTCAGCCACGTCAAAAACAAAGGCAATCCGGATCTGCTCCAAACCTTaGGATTCAACTTTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPCPSVWKSATSKTKAIRICSKP*DSTFIK Trigger: TTTGATGAAAGTTGAATCCAAAGGTTTGGAGCAGAT...CCGGATTGCCTTTGTTTTTGACGTGGCTGACTTCCACACGCTGGGGCAGGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS CCA 90 bp | AGTAGCTATTCATCATCACATCAGGGAATGCGTCAGGCCGCTCCCTaGGAGGCCGTGTTTTATAAACAAACTGATCGGGATCTGTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSYSSSHQGMRQAAP*EAVFYKQTDRDLYR Trigger: CCTATACAGATCCCGATCAGTTTGTTTATAAAACACGGCCTCCCAGGGAGCGGCCTGACGCATTCCCTGATGTGATGATGAATAGCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | GGCCAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGTTTGCCCCCTGGACCTaGGCTCTGAACAGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQRVTSPSIAHLRQNFHQFAPWT*ALNSDS Trigger: GGAGTCACTGTTCAGAGCCAAGGTCCAGGGGGCAAA...CTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | TGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTCTTTGGCTCGGAACCTaGGTTTCGAAACTGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRQSEIIYGGAEQALKPPLWLGT*VSKLNS Trigger: AGAGTTCAGTTTCGAAACCAAGGTTCCGAGCCAAAG...AGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | ATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCGGGATGGGACGCAGCTaGTCTCTGATGTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITFYCTFKTELSPEAQLSGMGRS*SLMFSC Trigger: GCAGGAGAACATCAGAGACAAGCTGCGTCCCATCCC...GGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAAAGGGTAACATCACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGGGGATGGGACGCAGCTaGTCTCTGATGTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GQRVTSPSIAHLRQNFHQGMGRS*SLMFSC Trigger: GCAGGAGAACATCAGAGACAAGCTGCGTCCCATCCC...CTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATGTTACCCTTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTAGCAACCATTTGCCATaGCTAATCTCCTTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKASHLETTVNGTDTASCSNHLP*LISLGH Trigger: GTGGCCCAAGGAGATTAGCAATGGCAAATGGTTGCT...ACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTGAAACTGTAGGTCCATACAGAACGAGAGAGGCCTaGCTGTCCAGCCCTCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTGALGVTISTVETVGPYRTREA*LSSPRS Trigger: ACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCT...GTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS CCA 90 bp | TTAACCTTGAGGCATATCCCGCTAGGTGAGCCACACATGGACTTCTaGCGGAGGTCAATTCTGTTAGGAGTCACTGTGATGGTTTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTLRHIPLGEPHMDF*RRSILLGVTVMVFR Trigger: TCTAAAAACCATCACAGTGACTCCTAACAGAATTGACCTCCGCCAGAAGTCCATGTGTGGCTCACCTAGCGGGATATGCCTCAAGGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS CCA 90 bp | CATCGTCGCCATCTTTCCGGGGATTCCTTGGATCCGAAGGGCTGTTaGTCACCGTTATTTCCAGAGCTATATCTTTCTGATCTTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRRHLSGDSLDPKGC*SPLFPELYLSDLLG Trigger: TCCTAAAAGATCAGAAAGATATAGCTCTGGAAATAACGGTGACCAACAGCCCTTCGGATCCAAGGAATCCCCGGAAAGATGGCGACGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | TGTCGTCAGTCTGAAATCATATATGGGGGAGCTGAGCAGGCTTTGAAGCCACCTATCCACTGGTCTTCCTaGCTTTCTGACATAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CRQSEIIYGGAEQALKPPIHWSS*LSDIGS Trigger: TGATCCTATGTCAGAAAGCAAGGAAGACCAGTGGAT...AGGTGGCTTCAAAGCCTGCTCAGCTCCCCCATATATGATTTCAGACTGACGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTACGGAGCTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATCTTTGGCTCGGAACCTaGGTTTCGAAACTGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AATELLKPNQTNQCGCLHLWLGT*VSKLNS Trigger: AGAGTTCAGTTTCGAAACCAAGGTTCCGAGCCAAAG...ATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAGCTCCGTAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACTTCTGGGATGCCTTTTaGAATTGGAAGGTAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDFWDAF*NWKVRE Trigger: TTCTCTTACCTTCCAATTCAAAAAGGCATCCCAGAA...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS GCA 90 bp | CTTCACATTACTCCATTTGCCTTGCTGGTTAATGTAGACGTAAACTaGACCCCCGACTTCACCATCCCTATCAAAATACTGTGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHITPFALLVNVDVN*TPDFTIPIKILWSS Trigger: GGAGCTCCACAGTATTTTGATAGGGATGGTGAAGTCGGGGGTGCAGTTTACGTCTACATTAACCAGCAAGGCAAATGGAGTAATGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 90 bp | CTCCACATCCTTCCTTTAAGAAGTGGACATCTGTCTGGACCGTTTTaGCTTCATTTGAATTCAGGATGGGAAGAACTTCGGGGAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHILPLRSGHLSGPF*LHLNSGWEELRGVS Trigger: ACTCACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGGATGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | CTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTGCTCCTGAGTATACTTaGGCTCGGAACCTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKPNQTNQCGCLHCCGVAPEYT*ARNLGF Trigger: GAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGC...AACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | TCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTGCTGTTACAGACATaGTCGTCTCCACATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQSQMSLEFGIGHFSMVSLLLQT*SSPHPS Trigger: GGAAGGATGTGGAGACGACAATGTCTGTAACAGCAA...TGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTGGGATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTCGCTGTAAGAGAATTTGTCTaGATTTCCTTCTCGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: RQATWKQLLMGQTQQAVAVREFV*ISFSGT Trigger: GGTACCCGAGAAGGAAATCAAGACAAATTCTCTTAC...AGCGACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | GCATGGTATCGGGGAATGCTGTCATCGTACCTAGAGCGCTTAAAGAATCCACACTTCAGATTTCATAGCTaGCTCACCAACAACTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AWYRGMLSSYLERLKNPHFRFHS*LTNNCT Trigger: GGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGAA...GTGTGGATTCTTTAAGCGCTCTAGGTACGATGACAGCATTCCCCGATACCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028522.10 |
||
| CDS-3UTR CAA 90 bp | AGAAGAATGCTTGTGGGAGCAGGCTGGGATAGCCACTCTGTTAGCACAGGTGACATCTGCTCCAAACCTTaGGATTCAACTTTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRMLVGAGWDSHSVSTGDICSKP*DSTFIK Trigger: TTTGATGAAAGTTGAATCCAAAGGTTTGGAGCAGAT...GTCACCTGTGCTAACAGAGTGGCTATCCCAGCCTGCTCCCACAAGCATTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | CCACAACCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAACTGAGCTACAGTCTTaGAGGGAAACACCGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PQPQQVPKLAMKNIDQLPTELQS*RETPSL Trigger: GAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAGT...TGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGGTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTACGGAGCTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATACACTGGAATTTCTCTaGAAAGGATTTCCGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AATELLKPNQTNQCGCLHTLEFL*KGFPSS Trigger: TGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTGT...ATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAGCTCCGTAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGGAATTCCAAAACGAACAAGAAATCTGGGCCGATTTCTCATGCACTTTACGTTGACGCTGCAGTaGAGAGTCTGGTATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQGIPKRTRNLGRFLMHFTLTLQ*RVWYFL Trigger: AAGAAAATACCAGACTCTCAACTGCAGCGTCAACGT...AAAGTGCATGAGAAATCGGCCCAGATTTCTTGTTCGTTTTGGAATTCCCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS TCA 90 bp | CATCGCAGAAACTCCAGTCTCCTCCGTCCATATCATCTTCAATTCTaGGATTCTGACTTAGGACATAACATCTTCCAAAGATATCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HRRNSSLLRPYHLQF*DSDLGHNIFQRYPA Trigger: CGCGGGATATCTTTGGAAGATGTTATGTCCTAAGTCAGAATCTCAGAATTGAAGATGATATGGACGGAGGAGACTGGAGTTTCTGCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS-3UTR CAA 90 bp | AATAACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATGGGATGGGACGCAGCTaGTCTCTGATGTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNSPATEDSLCNNKQHHHGMGRS*SLMFSC Trigger: GCAGGAGAACATCAGAGACAAGCTGCGTCCCATCCC...ATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAATCCCAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTCAGATTTCATAGCTaGCTCACCAACAACTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SQSQMSLEFGIGHFSMVSFRFHS*LTNNCT Trigger: GGTACAGTTGTTGGTGAGCAAGCTATGAAATCTGAA...TGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTGGGATTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTGAAACTGTAGGTCCATACAGCAACCATTTGCCATaGCTAATCTCCTTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTGALGVTISTVETVGPYSNHLP*LISLGH Trigger: GTGGCCCAAGGAGATTAGCAATGGCAAATGGTTGCT...GTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCCACTTGGAAACAACTGTTAATGGGACAGACACAGCAAGCTGTCGCTATCTGCTCCAAACCTTaGGATTCAACTTTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQATWKQLLMGQTQQAVAICSKP*DSTFIK Trigger: TTTGATGAAAGTTGAATCCAAAGGTTTGGAGCAGAT...AGCGACAGCTTGCTGTGTCTGTCCCATTAACAGTTGTTTCCAAGTGGCTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS CCA 90 bp | TTGCTGTTACAGACATTGTCGTCTCCACATCCTTCCTTTAAGAAGTaGACATCTGTCTGGACCGTTTTGGCTTCATTTGAATTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQTLSSPHPSFKK*TSVWTVLASFEFRM Trigger: CATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGGATGTGGAGACGACAATGTCTGTAACAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | CTCTTAAAACCTAATCAGACAAACCAGTGTGGCTGCCTTCATTGCTGTGGTGTTCCGTTTTGGCTTCATTaGAATTCAGGATGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLKPNQTNQCGCLHCCGVPFWLH*NSGWEE Trigger: TTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGG...AACACCACAGCAATGAAGGCAGCCACACTGGTTTGTCTGATTAGGTTTTAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
||
| CDS TCA 90 bp | CCTGCTGTCATCTATCTGTTTTTCAGGAAGTTCCCGTTTCTTTCTTaGGTTGTGAGACTCCTTCAGCTTCAGGTAGTTTATTTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAVIYLFFRKFPFLS*VVRLLQLQVVYFIV Trigger: CACAATGAAATAAACTACCTGAAGCTGAAGGAGTCTCACAACTCAAGAAAGAAACGGGAACTTCCTGAAAAACAGATAGATGACAGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS-3UTR CAA 90 bp | TCCACTCTACCAGTCTTAAATTTGGCTGTGCAAAACAGGAGCCTTAGGTGTAACGGATGCCTTTTTGAATaGGAAGGTAAGAGAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: STLPVLNLAVQNRSLRCNGCLFE*EGKRIC Trigger: ACAAATTCTCTTACCTTCCAATTCAAAAAGGCATCC...GTTACACCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAGACTGGTAGAGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGAGCCTTAGGTGTAACAATATCCACAGTTGAAACTGTAGGTCCATACACACTGGAATTTCTCTaGAAAGGATTTCCGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTGALGVTISTVETVGPYTLEFL*KGFPSS Trigger: TGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTGT...GTATGGACCTACAGTTTCAACTGTGGATATTGTTACACCTAAGGCTCCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | ACCTTCTATTGCACATTTAAGACAGAACTTTCACCAGAGGCACAGCTATCCATTAAAAGTGTTATTCTTTaGTTCTACACGGACGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TFYCTFKTELSPEAQLSIKSVIL*FYTDDP Trigger: GGGATCGTCCGTGTAGAACAAAAGAATAACACTTTT...AATGGATAGCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 |
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| CDS-3UTR CAA 90 bp | CCACAGCAGGTCCCAAAGCTAGCGATGAAAAACATTGATCAATTACCAATTATGGGATGCCTTTTTGAATaGGAAGGTAAGAGAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PQQVPKLAMKNIDQLPIMGCLFE*EGKRIC Trigger: ACAAATTCTCTTACCTTCCAATTCAAAAAGGCATCC...CATAATTGGTAATTGATCAATGTTTTTCATCGCTAGCTTTGGGACCTGCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | CAAATGAGCCTGGAGTTTGGTATAGGCCATTTCTCTATGGTCTCATTTGTAATTTTCTGGGATGCCTTTTaGAATTGGAAGGTAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QMSLEFGIGHFSMVSFVIFWDAF*NWKVRE Trigger: TTCTCTTACCTTCCAATTCAAAAAGGCATCCCAGAA...AATTACAAATGAGACCATAGAGAAATGGCCTATACCAAACTCCAGGCTCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | AATAACTCACCTGCAACAGAAGATTCTTTGTGCAACAACAAACAACATCATCATCCATTGCTAATCTCCTaGGGCCACTGTATATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NNSPATEDSLCNNKQHHHPLLIS*GHCIFK Trigger: CTTGAATATACAGTGGCCCAAGGAGATTAGCAATGG...ATGATGATGTTGTTTGTTGTTGCACAAAGAATCTTCTGTTGCAGGTGAGTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155249.2 |
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| CDS-3UTR CAA 90 bp | AAATATCATATACAAACAAATGTAACTAGCATTCAAGTCTGTCGACCCTGTGCTATGTGTTTCTCATCTTaGATCTCTCGCTCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KYHIQTNVTSIQVCRPCAMCFSS*ISRSSF Trigger: GAAAGAAGAGCGAGAGATCAAAGATGAGAAACACAT...AGCACAGGGTCGACAGACTTGAATGCTAGTTACATTTGTTTGTATATGATATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112101.8 |
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| CDS GCA 72 bp | GTTCGCCCTCTGCAGCGGGAGTGCTTCTGCCCGAGGTaGCCCCACAAGCAACAGCCGCTTGTCCTCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRPLQRECFCPR*PHKQQPLVLRL Trigger: CAGCCGGAGGACAAGCGGCTGTTGCTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTGCAGAGGGCGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | GGGAGTGAGTTCACCCGCCGGCGAGAGCTGGGCTCCTaGATCTCCACAGAAGCCGTGATGGGGATGGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: GSEFTRRRELGS*ISTEAVMGMGR Trigger: GCGTCCCATCCCCATCACGGCTTCTGTGGAGATCCAGGAGCCCAGCTCTCGCCGGCGGGTGAACTCACTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | CCCTGTTCTGTTCGCCCTCTGCAGCGGGAGTGCTTCTaGCCGAGGTGCCCCCACAAGCAACAGCCGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PCSVRPLQRECF*PRCPHKQQPLV Trigger: GACAAGCGGCTGTTGCTTGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTGCAGAGGGCGAACAGAACAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | TCACAGCTGTACAGGCCCCCTGTTCTGTTCGCCCTCTaGAGCGGGAGTGCTTCTGCCCGAGGTGCCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SQLYRPPVLFAL*SGSASARGAPT Trigger: TGTGGGGGCACCTCGGGCAGAAGCACTCCCGCTGCAGAGGGCGAACAGAACAGGGGGCCTGTACAGCTGTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 90 bp | GAGAAGCCGAAGAGGCTCCCGGGATCCCCCGATTTCCGGATCACGTaGTCCTCGCGGGTGTCCAGGTTGAAGGCTGTACCCAGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EKPKRLPGSPDFRIT*SSRVSRLKAVPSRA Trigger: AGCCCGGCTGGGTACAGCCTTCAACCTGGACACCCGCGAGGACAACGTGATCCGGAAATCGGGGGATCCCGGGAGCCTCTTCGGCTTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | ATTTCCGGATCACGTTGTCCTCGCGGGTGTCCAGGTTaGAGGCTGTACCCAGCCGGGCTAGAAGCCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ISGSRCPRGCPG*RLYPAGLEAPR Trigger: CCGCGGGGCTTCTAGCCCGGCTGGGTACAGCCTTCAACCTGGACACCCGCGAGGACAACGTGATCCGGAAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | AAGAGGCTCCCGGGATCCCCCGATTTCCGGATCACGTaGTCCTCGCGGGTGTCCAGGTTGAAGGCTGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: KRLPGSPDFRIT*SSRVSRLKAVP Trigger: GGGTACAGCCTTCAACCTGGACACCCGCGAGGACAACGTGATCCGGAAATCGGGGGATCCCGGGAGCCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TTCCGAGCTCACAGTCGGCTTGGGAGCCATTCTGGTTaGCCACACAGCTCAGCTGCTTCTCAGGGAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FRAHSRLGSHSG*PHSSAASQGKP Trigger: GGGCTTTCCCTGAGAAGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | AAGAACGAGAGAGGCCTTGCTGTCCAGCCCTCGCAGTaGGCACCTGATGTTCACACACCTCACGTTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: KNERGLAVQPSQ*APDVHTPHVDA Trigger: AGCGTCAACGTGAGGTGTGTGAACATCAGGTGCCCACTGCGAGGGCTGGACAGCAAGGCCTCTCTCGTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | GGATTTCCGAGCTCACAGTCGGCTTGGGAGCCATTCTaGTTGGCCACACAGCTCAGCTGCTTCTCAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GFPSSQSAWEPF*LATQLSCFSGK Trigger: TTTCCCTGAGAAGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | TCGATGTGCACACGTCACCACTTTGCCCCCTGGACCTaGGCTCTGAACAGTGACTCCCATCCACTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMCTRHHFAPWT*ALNSDSHPLVF Trigger: GAAGACCAGTGGATGGGAGTCACTGTTCAGAGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGCACATCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | CACGCCCGCTGCTTCTGCCGATTCAGGGTCAGCTCCTaGGTATACTTTGGCTCGGAACCTTGGTTTCGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HARCFCRFRVSS*VYFGSEPWFRN Trigger: GTTTCGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGCTGACCCTGAATCGGCAGAAGCAGCGGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | CTTCGTGTTGACGTGCTGCCGTTTCTCATATCGATGTaGACACGTCACCACTTTGCCCCCTGGACCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRVDVLPFLISM*TRHHFAPWTLA Trigger: AGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | CTCATATCGATGTGCACACGTCACCACTTTGCCCCCTaGACCTTGGCTCTGAACAGTGACTCCCATCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LISMCTRHHFAP*TLALNSDSHPL Trigger: CAGTGGATGGGAGTCACTGTTCAGAGCCAAGGTCCAGGGGGCAAAGTGGTGACGTGTGCACATCGATATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS TCA 72 bp | AATCACTGGCCGGGATCTGAAAATAGTGACCGAGTCTaGGAGGGAGCCCACAGCAAGGTCGGGGTAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: NHWPGSENSDRV*EGAHSKVGVGI Trigger: AATTCCTACCCCGACCTTGCTGTGGGCTCCCTCTCAGACTCGGTCACTATTTTCAGATCCCGGCCAGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS GCA 72 bp | CCAAAGATATCCCGCGACTCCTGCTTCGTGTTGACGTaGTGCCGTTTCTCATATCGATGTGCACACGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PKISRDSCFVLT*CRFSYRCAHVT Trigger: GGTGACGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS GCA 72 bp | AATGTCTTGCCACCCATCTGCATTGAGGTCCACCACTaGCACATCATAGCCAAACGAGGAAGCCAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NVLPPICIEVHH*HIIAKRGSQAF Trigger: GAAGGCCTGGCTTCCTCGTTTGGCTATGATGTGGCAGTGGTGGACCTCAATGCAGATGGGTGGCAAGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
||
| CDS CCA 72 bp | CTGTCTGGACCGTTTTGGCTTCATTTGAATTCAGGATaGGAAGAACTTCGGGGAGTGAGTTCACCCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGPFWLHLNSG*EELRGVSSPAG Trigger: GCCGGCGGGTGAACTCACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS CCA 72 bp | TTCATGGGCATCGTCGCCATCTTTCCGGGGATTCCTTaGATCCGAAGGGCTGTTGGTCACCGTTATTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FMGIVAIFPGIP*IRRAVGHRYFQ Trigger: CTGGAAATAACGGTGACCAACAGCCCTTCGGATCCAAGGAATCCCCGGAAAGATGGCGACGATGCCCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | AGAGTGTCTGGAAACGTGGCGATGAGTTTGGCTTCATaGGCATCGTCGCCATCTTTCCGGGGATTCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSGNVAMSLAS*ASSPSFRGFLG Trigger: TCCAAGGAATCCCCGGAAAGATGGCGACGATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAGACACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TTTCTCTTGAAAGGATTTCCGAGCTCACAGTCGGCTTaGGAGCCATTCTGGTTGGCCACACAGCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLLKGFPSSQSA*EPFWLATQLSC Trigger: GCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAAATCCTTTCAAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CTTCATGGGCATCGTCGCCATCTTTCCGGGGATTCCTaGGATCCGAAGGGCTGTTGGTCACCGTTATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LHGHRRHLSGDS*DPKGCWSPLFP Trigger: TGGAAATAACGGTGACCAACAGCCCTTCGGATCCAAGGAATCCCCGGAAAGATGGCGACGATGCCCATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 90 bp | ACGCCCGCTGCTTCTGCCGATTCAGGGTCAGCTCCTGAGTATACTTaGGCTCGGAACCTTGGTTTCGAAACTGAACTCTCGATGACAACC | + |
|
Preference number: 6 (lower is better) Translates to: TPAASADSGSAPEYT*ARNLGFETELSMTT Trigger: GGTTGTCATCGAGAGTTCAGTTTCGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGCTGACCCTGAATCGGCAGAAGCAGCGGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | TATCAAATTCAATCCGTGTACAAGGTCCCCGGGAGGTaGTGTCACAGCTGTACAGGCCCCCTGTTCTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: YQIQSVYKVPGR*CHSCTGPLFCS Trigger: CGAACAGAACAGGGGGCCTGTACAGCTGTGACATCACCTCCCGGGGACCTTGTACACGGATTGAATTTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | AAGATATCCCGCGACTCCTGCTTCGTGTTGACGTGCTaGCGTTTCTCATATCGATGTGCACACGTCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: KISRDSCFVLTC*RFSYRCAHVTT Trigger: AGTGGTGACGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | GCCGAAGTAAGGCGATGTCCCCTCGAGAACCTGTGTTaGCTTGGTAATTATGCCAGTCGGGGATCCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: AEVRRCPLENLC*LGNYASRGSMI Trigger: TATCATGGATCCCCGACTGGCATAATTACCAAGCCAACACAGGTTCTCGAGGGGACATCGCCTTACTTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | AGGCATATCCCGCTAGGTGAGCCACACATGGACTTCTaGCGGAGGTCAATTCTGTTAGGAGTCACTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RHIPLGEPHMDF*RRSILLGVTVM Trigger: CATCACAGTGACTCCTAACAGAATTGACCTCCGCCAGAAGTCCATGTGTGGCTCACCTAGCGGGATATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | TCCACCAAGCTACTCCTGAATACTGAGCTACAGTCTTaGAGGGAAACACCGTCACTCGAACCTGAGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: STKLLLNTELQS*RETPSLEPECP Trigger: CGGGCACTCAGGTTCGAGTGACGGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCAGGAGTAGCTTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 90 bp | AACACTGGAATTTCTCTTGAAAGGATTTCCGAGCTCACAGTCGGCTaGGGAGCCATTCTGGTTGGCCACACAGCTCAGCTGCTTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NTGISLERISELTVG*GAILVGHTAQLLLR Trigger: CCTGAGAAGCAGCTGAGCTGTGTGGCCAACCAGAATGGCTCCCAAGCCGACTGTGAGCTCGGAAATCCTTTCAAGAGAAATTCCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | ATCTTCCAAAGATATCCCGCGACTCCTGCTTCGTGTTaGCGTGCTGCCGTTTCTCATATCGATGTGCACACG | + |
|
Preference number: 6 (lower is better) Translates to: IFQRYPATPASC*RAAVSHIDVHT Trigger: CGTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTTTGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | GTAGGAATTCCGATCCAGGTCCATATTCCCAGCGATTaGATAGCCGAAGTAAGGCGATGTCCCCTCGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VGIPIQVHIPSD*IAEVRRCPLEN Trigger: GTTCTCGAGGGGACATCGCCTTACTTCGGCTATTCAATCGCTGGGAATATGGACCTGGATCGGAATTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | GCTTGCTCACCAACAACTGTACCTCCAAAATACACCTaGGAAGGCTTAGCGACTCCGGAGACCGATAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSPTTVPPKYT*EGLATPETDKS Trigger: GCTTTTATCGGTCTCCGGAGTCGCTAAGCCTTCGCAGGTGTATTTTGGAGGTACAGTTGTTGGTGAGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TGCACCCCCGACTTCACCATCCCTATCAAAATACTGTaGAGCTCCGATAACAATGTCTTGCCACCCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTPDFTIPIKIL*SSDNNVLPPIC Trigger: GCAGATGGGTGGCAAGACATTGTTATCGGAGCTCCACAGTATTTTGATAGGGATGGTGAAGTCGGGGGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TCATCATCACATCAGGGAATGCGTCAGGCCGCTCCCTaGGAGGCCGTGTTTTATAAACAAACTGATCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSHQGMRQAAP*EAVFYKQTDRD Trigger: ATCCCGATCAGTTTGTTTATAAAACACGGCCTCCCAGGGAGCGGCCTGACGCATTCCCTGATGTGATGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CATCTTCCAAAGATATCCCGCGACTCCTGCTTCGTGTaGACGTGCTGCCGTTTCTCATATCGATGTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HLPKISRDSCFV*TCCRFSYRCAH Trigger: GTGTGCACATCGATATGAGAAACGGCAGCACGTCAACACGAAGCAGGAGTCGCGGGATATCTTTGGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | GGTAGGAATTCCGATCCAGGTCCATATTCCCAGCGATaGAATAGCCGAAGTAAGGCGATGTCCCCTCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRNSDPGPYSQR*NSRSKAMSPRE Trigger: TTCTCGAGGGGACATCGCCTTACTTCGGCTATTCAATCGCTGGGAATATGGACCTGGATCGGAATTCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | GCTTCTGCCGATTCAGGGTCAGCTCCTGAGTATACTTaGGCTCGGAACCTTGGTTTCGAAACTGAACTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ASADSGSAPEYT*ARNLGFETELS Trigger: CGAGAGTTCAGTTTCGAAACCAAGGTTCCGAGCCAAAGTATACTCAGGAGCTGACCCTGAATCGGCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CCTCGCAGTGGGCACCTGATGTTCACACACCTCACGTaGACGCTGCAGTTGAGAGTCTGGTATTTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSGHLMFTHLT*TLQLRVWYFLS Trigger: TGAAAGAAAATACCAGACTCTCAACTGCAGCGTCAACGTGAGGTGTGTGAACATCAGGTGCCCACTGCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | AAAACAGGCTTTAACCTTGAGGCATATCCCGCTAGGTaGGCCACACATGGACTTCTGGCGGAGGTCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: KTGFNLEAYPAR*ATHGLLAEVNS Trigger: AGAATTGACCTCCGCCAGAAGTCCATGTGTGGCTCACCTAGCGGGATATGCCTCAAGGTTAAAGCCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | CCTCAGTTCTCTGTAAGCGGAATATGTCAGAGTGTCTaGAAACGTGGCGATGAGTTTGGCTTCATGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PQFSVSGICQSV*KRGDEFGFMGI Trigger: GATGCCCATGAAGCCAAACTCATCGCCACGTTTCCAGACACTCTGACATATTCCGCTTACAGAGAACTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TGGAATATTCCTCTAGAAATGTGCTGTTCCACAACCTaGAACGAAGAACGAGAGAGGCCTTGCTGTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WNIPLEMCCSTT*NEERERPCCPA Trigger: GGCTGGACAGCAAGGCCTCTCTCGTTCTTCGTTCCAGGTTGTGGAACAGCACATTTCTAGAGGAATATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CCTATCAAAATACTGTGGAGCTCCGATAACAATGTCTaGCCACCCATCTGCATTGAGGTCCACCACTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PIKILWSSDNNV*PPICIEVHHCH Trigger: GTGGCAGTGGTGGACCTCAATGCAGATGGGTGGCAAGACATTGTTATCGGAGCTCCACAGTATTTTGATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 90 bp | CTTCCTTTAAGAAGTGGACATCTGTCTGGACCGTTTTGGCTTCATTaGAATTCAGGATGGGAAGAACTTCGGGGAGTGAGTTCACCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPLRSGHLSGPFWLH*NSGWEELRGVSSPA Trigger: GGCGGGTGAACTCACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCTTAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | GAAGGTTTCGCAGTATATTCAAAACAGGCTTTAACCTaGAGGCATATCCCGCTAGGTGAGCCACACATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EGFAVYSKQALT*RHIPLGEPHMD Trigger: GTCCATGTGTGGCTCACCTAGCGGGATATGCCTCAAGGTTAAAGCCTGTTTTGAATATACTGCGAAACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | AGAAGTGGACATCTGTCTGGACCGTTTTGGCTTCATTaGAATTCAGGATGGGAAGAACTTCGGGGAGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSGHLSGPFWLH*NSGWEELRGVS Trigger: ACTCACTCCCCGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | ACTCCATTTGCCTTGCTGGTTAATGTAGACGTAAACTaGACCCCCGACTTCACCATCCCTATCAAAATACTG | + |
|
Preference number: 6 (lower is better) Translates to: TPFALLVNVDVN*TPDFTIPIKIL Trigger: CAGTATTTTGATAGGGATGGTGAAGTCGGGGGTGCAGTTTACGTCTACATTAACCAGCAAGGCAAATGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | GTAATGAAAGTCCTTAGTGAAAGTAGCCGCTACTCCTaGCTGACAGGAGCCAAACTTTTCATGGCCTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VMKVLSESSRYS*LTGAKLFMASQ Trigger: TTGAGAGGCCATGAAAAGTTTGGCTCCTGTCAGCAAGGAGTAGCGGCTACTTTCACTAAGGACTTTCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS GCA 72 bp | AGGCCTTCTCCGTCAAATATATACTCAGGGAGCAGATaGGCGGACTTCATGTCTCTTTTTAGCAAAACTACA | + |
|
Preference number: 6 (lower is better) Translates to: RPSPSNIYSGSR*ADFMSLFSKTT Trigger: TGTAGTTTTGCTAAAAAGAGACATGAAGTCCGCGCATCTGCTCCCTGAGTATATATTTGACGGAGAAGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | TTCTACACGGACGATCCCTTTCCAGTTGTAAGTCCCTaGGGCTCCAAAAACAATGTAATGAAAGTCCTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FYTDDPFPVVSP*GSKNNVMKVLS Trigger: ACTAAGGACTTTCATTACATTGTTTTTGGAGCCCCAGGGACTTACAACTGGAAAGGGATCGTCCGTGTAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | CAGACATTGTCGTCTCCACATCCTTCCTTTAAGAAGTaGACATCTGTCTGGACCGTTTTGGCTTCATTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QTLSSPHPSFKK*TSVWTVLASFE Trigger: TTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGGATGTGGAGACGACAATGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CCTTCCTTTAAGAAGTGGACATCTGTCTGGACCGTTTaGGCTTCATTTGAATTCAGGATGGGAAGAACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSFKKWTSVWTV*ASFEFRMGRTS Trigger: CGAAGTTCTTCCCATCCTGAATTCAAATGAAGCCAAAACGGTCCAGACAGATGTCCACTTCTTAAAGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | CCTTCTCGGGTACCAAATTTATACTCTAGCTTAAGGTaGCTGTTACAGACATTGTCGTCTCCACATCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSRVPNLYSSLR*LLQTLSSPHPS Trigger: GGAAGGATGTGGAGACGACAATGTCTGTAACAGCAACCTTAAGCTAGAGTATAAATTTGGTACCCGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 90 bp | CGGGTACCAAATTTATACTCTAGCTTAAGGTTGCTGTTACAGACATaGTCGTCTCCACATCCTTCCTTTAAGAAGTGGACATCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPNLYSSLRLLLQT*SSPHPSFKKWTSVW Trigger: CCAGACAGATGTCCACTTCTTAAAGGAAGGATGTGGAGACGACAATGTCTGTAACAGCAACCTTAAGCTAGAGTATAAATTTGGTACCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | AACTCCAGTCTCCTCCGTCCATATCATCTTCAATTCTaGGATTCTGACTTAGGACATAACATCTTCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSSLLRPYHLQF*DSDLGHNIFQR Trigger: TCTTTGGAAGATGTTATGTCCTAAGTCAGAATCTCAGAATTGAAGATGATATGGACGGAGGAGACTGGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | TCTTCTTTCTTTTTCAGCTTCGAGAATACCCAAAATTaGTATTGGAGGGTTATAACCGGAAGGTTTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSFFFSFENTQN*YWRVITGRFRS Trigger: ACTGCGAAACCTTCCGGTTATAACCCTCCAATATCAATTTTGGGTATTCTCGAAGCTGAAAAAGAAAGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | ATAGGGAGCTCCAACAGCAATATCTGGATAGCCATCTaGGTTAATATCACCTATATTTTTCACAGAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: IGSSNSNIWIAI*VNITYIFHRDS Trigger: GGAATCTCTGTGAAAAATATAGGTGATATTAACCAAGATGGCTATCCAGATATTGCTGTTGGAGCTCCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | AATTTATACTCTAGCTTAAGGTTGCTGTTACAGACATaGTCGTCTCCACATCCTTCCTTTAAGAAGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: NLYSSLRLLLQT*SSPHPSFKKWT Trigger: TGTCCACTTCTTAAAGGAAGGATGTGGAGACGACAATGTCTGTAACAGCAACCTTAAGCTAGAGTATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS TCA 72 bp | ACTTTTGCCTTCGCTGTAATTGGAGCCAAATTATCCTaGTTGCTTGTTGTTTCCAACTTCAGATTAATATCC | + |
|
Preference number: 6 (lower is better) Translates to: TFAFAVIGAKLS*LLVVSNFRLIS Trigger: GGATATTAATCTGAAGTTGGAAACAACAAGCAATCAGGATAATTTGGCTCCAATTACAGCGAAGGCAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CCA 72 bp | AAGCAATTCAATAACCACTTTTGCCTTCGCTGTAATTaGAGCCAAATTATCCTGATTGCTTGTTGTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KQFNNHFCLRCN*SQIILIACCFQ Trigger: TTGGAAACAACAAGCAATCAGGATAATTTGGCTCCAATTACAGCGAAGGCAAAAGTGGTTATTGAATTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
||
| CDS CAA 72 bp | ATATTCAAGGTTGCTGTGCCGAGGTTTTTAAGAGGCTaGCCTAAGTTAATCACCCTAAATTCATACTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: IFKVAVPRFLRG*PKLITLNSYSI Trigger: AATAGAGTATGAATTTAGGGTGATTAACTTAGGCAAGCCTCTTAAAAACCTCGGCACAGCAACCTTGAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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| CDS CAA 72 bp | TTTCTTTTTCAGCTTCGAGAATACCCAAAATTGATATaGGAGGGTTATAACCGGAAGGTTTCGCAGTATATT | + |
|
Preference number: 6 (lower is better) Translates to: FLFQLREYPKLI*EGYNRKVSQYI Trigger: AATATACTGCGAAACCTTCCGGTTATAACCCTCCAATATCAATTTTGGGTATTCTCGAAGCTGAAAAAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028522.10 ENSMUST00000112101.8 ENSMUST00000155249.2 ENSMUST00000238991.2 |
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