Pregenerated sensors for ITGA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027009Ensembl transcript IDs: ENSMUST00000099972.5
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCAGCACTCAAAACCTCCCTCCACGGCTCCAGCCAGAGGCTTGTaGACAAGCCATCCTCACAAGTCAGGAAATCTGAGGAAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: FQHSKPPSTAPARGL*TSHPHKSGNLRKGQ Trigger: CTGGCCCTTCCTCAGATTTCCTGACTTGTGAGGATGGCTTGTTCACAAGCCTCTGGCTGGAGCCGTGGAGGGAGGTTTTGAGTGCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR GCA 90 bp | GAGAACAGCAGAGAAGCATCTACACCAGAGAGAGCCTTCCCTGTTTaGTTCCCTATGTCCTTTGTTCCCTACCCTGCCTCCCCCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: ENSREASTPERAFPV*FPMSFVPYPASPTS Trigger: GGAAGTGGGGGAGGCAGGGTAGGGAACAAAGGACATAGGGAAGCAAACAGGGAAGGCTCTCTCTGGTGTAGATGCTTCTCTGCTGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CCA 90 bp | GATGCAGAGGGGGAGGAAGATGAAGTGAAGCAGAGCAGAAGCACATaGCCTGGAGAAACCGCAAGTTCTAAGGGGTCTCATAAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: DAEGEEDEVKQSRST*PGETASSKGSHKLW Trigger: CCACAGCTTATGAGACCCCTTAGAACTTGCGGTTTCTCCAGGCCATGTGCTTCTGCTCTGCTTCACTTCATCTTCCTCCCCCTCTGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR TCA 90 bp | AGGGGCTTGGGCAGTGACCTAGGCTGTAGCAGTATGAATTTGATTTaGGGGGCCTACAGAGAACAGCAGAGAAGCATCTACACCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGLGSDLGCSSMNLI*GAYREQQRSIYTRE Trigger: CTCTCTGGTGTAGATGCTTCTCTGCTGTTCTCTGTAGGCCCCTCAAATCAAATTCATACTGCTACAGCCTAGGTCACTGCCCAAGCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR GCA 90 bp | TCAGCTCCTTGGGTATTTTCTCTAACTCCTTCATTGGGGACCCTGTaGTCTGTCAATAGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SAPWVFSLTPSLGTL*SVNRRRGPWSCEGS Trigger: AGAACCTTCACAGGACCAAGGGCCTCTCCTCCTATTGACAGAGCACAGGGTCCCCAATGAAGGAGTTAGAGAAAATACCCAAGGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR TCA 90 bp | GATGCAGCACCACCAAGAGCAGTCTTCAGGTCCTCTGCTTTAAAATaGTTGATCCAGCTAGAGCCATGCGTCTCTCCGTGTGTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: DAAPPRAVFRSSALK*LIQLEPCVSPCVFF Trigger: AAAGAAAACACACGGAGAGACGCATGGCTCTAGCTGGATCAATCATTTTAAAGCAGAGGACCTGAAGACTGCTCTTGGTGGTGCTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CCA 90 bp | TTGATCCAGCTAGAGCCATGCGTCTCTCCGTGTGTTTTCTTTGGTTaGTGGTTTAGTCCCAAGAAGCTCTGGGGTTACTGGTTAGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: LIQLEPCVSPCVFFG*WFSPKKLWGYWLVH Trigger: ATGAACTAACCAGTAACCCCAGAGCTTCTTGGGACTAAACCACCAACCAAAGAAAACACACGGAGAGACGCATGGCTCTAGCTGGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CCA 90 bp | TCTCCGTGTGTTTTCTTTGGTTGGTGGTTTAGTCCCAAGAAGCTCTaGGGTTACTGGTTAGTTCATATTGTTGTTCCTCCTATGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SPCVFFGWWFSPKKL*GYWLVHIVVPPMGL Trigger: CAGCCCCATAGGAGGAACAACAATATGAACTAACCAGTAACCCCAGAGCTTCTTGGGACTAAACCACCAACCAAAGAAAACACACGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR TCA 90 bp | ATTCTTCCCCCTTCCTTCAAAAATATCTCAACGCCCATATCAGCTTaGAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAAGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ILPPSFKNISTPISA*RSYEDSSSQFPKLC Trigger: GCAAAGCTTAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTGAGATATTTTTGAAGGAAGGGGGAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR GCA 90 bp | TGGTTCCTAAATCTCTCTTCACACAATTTTCGATCATCAGTGAGCTaGAGTTCATGTTGTATCAGTGTGTATCAGCTAAAGTGCGATATT | + |
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Preference number: 1 (lower is better) Translates to: WFLNLSSHNFRSSVS*SSCCISVYQLKCDI Trigger: AATATCGCACTTTAGCTGATACACACTGATACAACATGAACTGCAGCTCACTGATGATCGAAAATTGTGTGAAGAGAGATTTAGGAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR TCA 90 bp | ATGCCACTGCACACAAACTTGATCAGTGATTTGCAGTTCCAACTATaGTTTTTGTGTCTCCATTTCTATGACAGAATGTGGTGTTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: MPLHTNLISDLQFQL*FLCLHFYDRMWCFR Trigger: TCTAAAACACCACATTCTGTCATAGAAATGGAGACACAAAAATCATAGTTGGAACTGCAAATCACTGATCAAGTTTGTGTGCAGTGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CAA 90 bp | AGAGAACAGCAGAGAAGCATCTACACCAGAGAGAGCCTTCCCTGTTaGCTTCCCTATGTCCTTTGTTCCCTACCCTGCCTCCCCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: REQQRSIYTRESLPC*LPYVLCSLPCLPHF Trigger: GAAGTGGGGGAGGCAGGGTAGGGAACAAAGGACATAGGGAAGCAAACAGGGAAGGCTCTCTCTGGTGTAGATGCTTCTCTGCTGTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACGGGAGTGGGTCGATTaGGGAGCAGGGGACAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLREWVD*GAGDRG Trigger: TCCCCTGTCCCCTGCTCCCCAATCGACCCACTCCCG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATATAGGGGAACGCCTTaGCCAGGAAGCGGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLYRGTP*PGSGSG Trigger: CCCACTCCCGCTTCCTGGCCAAGGCGTTCCCCTATA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTCCAGCCAGAGGCTTGTaGACAAGCCATCCTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVPARGL*TSHPHK Trigger: CTTGTGAGGATGGCTTGTTCACAAGCCTCTGGCTGG...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAGAGGGGGAGGAAGATaGAGTGAAGCAGAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVRGGGR*SEAEQK Trigger: CTTCTGCTCTGCTTCACTTCATCTTCCTCCCCCTCT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CAA 90 bp | ATAGTCTCAGGCGAGCCCAGGCTTTTCACTTTGAGAGGAATAGATTaGAGAGGATGGTTTTCAGATGCAGAACTAGCCAGGTGCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: IVSGEPRLFTLRGID*RGWFSDAELARCRT Trigger: AGTTCTGCACCTGGCTAGTTCTGCATCTGAAAACCATCCTCTCAAATCTATTCCTCTCAAAGTGAAAAGCCTGGGCTCGCCTGAGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAAAGCTCCACCCTGTTaGAGTAAGGGACTGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVKAPPC*SKGLSK Trigger: CTTGGACAGTCCCTTACTTCAACAGGGTGGAGCTTT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACAGAGCAGAAGCACATaGCCTGGAGAAACCGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLQSRST*PGETAS Trigger: ACTTGCGGTTTCTCCAGGCCATGTGCTTCTGCTCTG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAGGGAGGAAGATGAAGTaGAGCAGAGCAGAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLGRKMK*SRAEAH Trigger: ATGTGCTTCTGCTCTGCTTCACTTCATCTTCCTCCC...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACACAACACTGAAGGCTaGCCCTTTTACCCAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLHNTEG*PFYPAH Trigger: ATGTGCTGGGTAAAAGGGGCAGCCTTCAGTGTTGTG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATTGTTGTTCCTCCTATaGGGCTGCAAACCCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLLLFLL*GCKPLQ Trigger: CTGAAGGGGTTTGCAGCCCCATAGGAGGAACAACAA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CAA 90 bp | TTAAGAGTGCTTTGGAATGGTCACAGATGTTGGTGTTTTAGGTCCTaGCTGGCTTGTGGCTCAGCTAGGAGTATATGCCAATCTGTATGT | + |
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Preference number: 2 (lower is better) Translates to: LRVLWNGHRCWCFRS*LACGSARSICQSVC Trigger: ACATACAGATTGGCATATACTCCTAGCTGAGCCACAAGCCAGCAAGGACCTAAAACACCAACATCTGTGACCATTCCAAAGCACTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTCTGACAAGCCACCTTTaGGTAGCTTCTTTCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVLTSHL*VASFLK Trigger: CTTCAAGAAAGAAGCTACCCAAAGGTGGCTTGTCAG...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATCCATTTCACTGAGATaGGCCACTTCATCAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLSISLR*ATSSVM Trigger: CATCACTGATGAAGTGGCTCATCTCAGTGAAATGGA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTTCCTCTGCTTTAAAATaGTTGATCCAGCTAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVSSALK*LIQLEP Trigger: TGGCTCTAGCTGGATCAATCATTTTAAAGCAGAGGA...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAACAAGAGTCCGCAGCTaGCCATTTCCCCAGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLTRVRS*PFPQKP Trigger: TGGCTTCTGGGGAAATGGTCAGCTGCGGACTCTTGT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCACAAGTCAGGAAATCTaGGGAAGGGCCAGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVTSQEI*GRASWH Trigger: ATGCCAGCTGGCCCTTCCTCAGATTTCCTGACTTGT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCATCCAGCTAGAGCCATaGGTCTCTCCGTGTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVIQLEP*VSPCVF Trigger: GAAAACACACGGAGAGACGCATGGCTCTAGCTGGAT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAGCTTGAAGAAGTTATaGAGATTCATCATCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVSLKKL*RFIIPV Trigger: AACTGGGATGATGAATCTTCATAACTTCTTCAAGCT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTACCCCAGAAGCCATCCTaGTGCAAACGGATTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLPQKPS*CKRILF Trigger: GAACAAAATCCGTTTGCAGCAGGATGGCTTCTGGGG...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCAGGATGGTTTTCAGATaGAGAACTAGCCAGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVRMVFR*RTSQVQ Trigger: CTGCACCTGGCTAGTTCTGCATCTGAAAACCATCCT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCCACTGCACACAAACTTaGTCAGTGATTTGCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVHCTQT*SVICSS Trigger: GGAACTGCAAATCACTGATCAAGTTTGTGTGCAGTG...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAACTTGAAGATTTCCCCTaGACTAAGAGTATGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKLEDFP*TKSMSQ Trigger: TTGTGACATACTCTTAGTGCAGGGGAAATCTTCAAG...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAATTAAATATGGTTTCTaGTCACCCAGATCTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLIKYGF*SPRSDA Trigger: AGCATCAGATCTGGGTGAGCAGAAACCATATTTAAT...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAACGTTCTTTTGTACCTaGAAGGCAGGAGTCGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLTFFCT*KAGVGF Trigger: AAAACCGACTCCTGCCTTTCAGGTACAAAAGAACGT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAAGGAGAGCTGATATTTaGGCAGATAAAAGGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLRRADI*ADKREG Trigger: GCCTTCCCTTTTATCTGCCCAAATATCAGCTCTCCT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTACTTGGAACAGCCATTTaGAAGAGTCTCAGTGAATTC | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLLGTAI*KSLSEF Trigger: GAATTCACTGAGACTCTTTCAAATGGCTGTTCCAAG...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCTGTGTTTTCTTTGGTTaGTGGTTTAGTCCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVCVFFG*WFSPKK Trigger: CTTCTTGGGACTAAACCACCAACCAAAGAAAACACA...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTACACAAACTTGATCAGTaGTTTGCAGTTCCAACTATG | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLHKLDQ*FAVPTM Trigger: CATAGTTGGAACTGCAAATCACTGATCAAGTTTGTG...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR GCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAAGTCTTCAGGTCCTCTaGTTTAAAATGATTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLSLQVL*FKMIDP Trigger: TGGATCAATCATTTTAAAGCAGAGGACCTGAAGACT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTATCCATTAGACAATCTTaGAACAGCCATTTGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLSIRQS*NSHLKE Trigger: CTCTTTCAAATGGCTGTTCCAAGATTGTCTAATGGA...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCTTCTATGACAGAATGTaGTGTTTTAGAGTCCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: VKVTRQELAHFIYRYNTVFYDRM*CFRVLV Trigger: AACTAGGACTCTAAAACACCACATTCTGTCATAGAA...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CCA 72 bp | TTAGCAAGCTTAATGTCTCAGCAGGCTGAAGTGTGCTaGGAGGGAGGGACAGGGTCCTCTGCTAGGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LASLMSQQAEVC*EGGTGSSARWG Trigger: ACCCCACCTAGCAGAGGACCCTGTCCCTCCCTCCCAGCACACTTCAGCCTGCTGAGACATTAAGCTTGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR CCA 72 bp | GGGACCCTGTGCTCTGTCAATAGGAGGAGAGGCCCTTaGTCCTGTGAAGGTTCTATTCCCCAGTATAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GTLCSVNRRRGP*SCEGSIPQYRG Trigger: TCCCCTATACTGGGGAATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCTATTGACAGAGCACAGGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAGCGGGAGTGGGTCGATaGGGGAGCAGGGGACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLAGVGR*GSRGQG Trigger: CCCCTGTCCCCTGCTCCCCAATCGACCCACTCCCGC...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| 3UTR TCA 72 bp | TCAAAACCTCCCTCCACGGCTCCAGCCAGAGGCTTGTaGACAAGCCATCCTCACAAGTCAGGAAATCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKPPSTAPARGL*TSHPHKSGNLR Trigger: CCTCAGATTTCCTGACTTGTGAGGATGGCTTGTTCACAAGCCTCTGGCTGGAGCCGTGGAGGGAGGTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | AGAGAAGCATCTACACCAGAGAGAGCCTTCCCTGTTTaGTTCCCTATGTCCTTTGTTCCCTACCCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: REASTPERAFPV*FPMSFVPYPAS Trigger: GGAGGCAGGGTAGGGAACAAAGGACATAGGGAAGCAAACAGGGAAGGCTCTCTCTGGTGTAGATGCTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | GCTTGTGAACAAGCCATCCTCACAAGTCAGGAAATCTaGGGAAGGGCCAGCTGGCATCAAACCCTTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ACEQAILTSQEI*GRASWHQTLPV Trigger: TACAGGAAGGGTTTGATGCCAGCTGGCCCTTCCTCAGATTTCCTGACTTGTGAGGATGGCTTGTTCACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | GGTCACCTCTCCGGTACATCCAGAGCTTTAGTGTTTTaGTTCACTCATCCACCGAAGCTGACAAGCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHLSGTSRALVF*FTHPPKLTSHL Trigger: AAGGTGGCTTGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGAGAGGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | TGGGTATTTTCTCTAACTCCTTCATTGGGGACCCTGTaGTCTGTCAATAGGAGGAGAGGCCCTTGGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WVFSLTPSLGTL*SVNRRRGPWSC Trigger: ACAGGACCAAGGGCCTCTCCTCCTATTGACAGAGCACAGGGTCCCCAATGAAGGAGTTAGAGAAAATACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | CTAGAGCCATGCGTCTCTCCGTGTGTTTTCTTTGGTTaGTGGTTTAGTCCCAAGAAGCTCTGGGGTTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LEPCVSPCVFFG*WFSPKKLWGYW Trigger: CCAGTAACCCCAGAGCTTCTTGGGACTAAACCACCAACCAAAGAAAACACACGGAGAGACGCATGGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | GAGGAGGAAGATGAAGTGAAGCAGAGCAGAAGCACATaGCCTGGAGAAACCACAGGTTCTAAGGGGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EEEDEVKQSRST*PGETTGSKGSH Trigger: ATGAGACCCCTTAGAACCTGTGGTTTCTCCAGGCCATGTGCTTCTGCTCTGCTTCACTTCATCTTCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | CCACCAAGAGCAGTCTTCAGGTCCTCTGCTTTAAAATaGTTGATCCAGCTAGAGCCATGCGTCTCTCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPRAVFRSSALK*LIQLEPCVSPC Trigger: ACACGGAGAGACGCATGGCTCTAGCTGGATCAATCATTTTAAAGCAGAGGACCTGAAGACTGCTCTTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | GGCAGTGACCTAGGCTGTAGCAGTATGAATTTGATTTaGGGGGCCTACAGAGAACAGCAGAGAAGCATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSDLGCSSMNLI*GAYREQQRSIY Trigger: GTAGATGCTTCTCTGCTGTTCTCTGTAGGCCCCTCAAATCAAATTCATACTGCTACAGCCTAGGTCACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | TCCTGTAAAGCGATCTTTCTTCACAACACTGAAGGCTaGCCCTTTTACCCAGCACATGTTCAAAGTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SCKAIFLHNTEG*PFYPAHVQSLA Trigger: GGCCAGACTTTGAACATGTGCTGGGTAAAAGGGGCAGCCTTCAGTGTTGTGAAGAAAGATCGCTTTACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | TGCTTCACTCATCCACCGAAGCTGACAAGCCACCTTTaGGTAGCTTCTTTCTTGAAGATTTCCCCTGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: CFTHPPKLTSHL*VASFLKISPAL Trigger: TAGTGCAGGGGAAATCTTCAAGAAAGAAGCTACCCAAAGGTGGCTTGTCAGCTTCGGTGGATGAGTGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | GGTTGGTGGTTTAGTCCCAAGAAGCTCTGGGGTTACTaGTTAGTTCATATTGTTGTTCCTCCTATGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GWWFSPKKLWGY*LVHIVVPPMGL Trigger: CAGCCCCATAGGAGGAACAACAATATGAACTAACCAGTAACCCCAGAGCTTCTTGGGACTAAACCACCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | GTTCCTCTGGGACAGAGCGCAAGTTACAGGTTTTCCTaGTTACCAGCTGAAGGATATGCTGATTTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VPLGQSASYRFS*LPAEGYADLGK Trigger: TTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAACTTGCGCTCTGTCCCAGAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | AGGTGGTTAAGAGTGCTTTGGAATGGTCACAGATGTTaGTGTTTTAGGTCCTTGCTGGCTTGTGGCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RWLRVLWNGHRC*CFRSLLACGSA Trigger: AGCTGAGCCACAAGCCAGCAAGGACCTAAAACACCAACATCTGTGACCATTCCAAAGCACTCTTAACCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | AAAAAGTATATGTACATACACACAAGAGTCCGCAGCTaGCCATTTCCCCAGAAGCCATCCTGCTGCAAACGG | + |
|
Preference number: 3 (lower is better) Translates to: KKYMYIHTRVRS*PFPQKPSCCKR Trigger: CCGTTTGCAGCAGGATGGCTTCTGGGGAAATGGTCAGCTGCGGACTCTTGTGTGTATGTACATATACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | AGGTCCTTGCTGGCTTGTGGCTCAGCTAGGAGTATATaGCAATCTGTATGTGTGATTTATGCACCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSLLACGSARSI*QSVCVIYAPHL Trigger: CAAGTGTGGTGCATAAATCACACATACAGATTGGCATATACTCCTAGCTGAGCCACAAGCCAGCAAGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAAACCCCTTCAGCTCCTaGGGTATTTTCTCTAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLNPFSS*GIFSNS Trigger: GGAGTTAGAGAAAATACCCAAGGAGCTGAAGGGGTT...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | TTCATCATCAGACATGCTGAACTGACTTGCCTGAACTaGTATCTTGGTTTTTCATCCGGATCCAGTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FIIRHAELTCLN*YLGFSSGSSQD Trigger: GTCCTGACTGGATCCGGATGAAAAACCAAGATATCAGTTCAGGCAAGTCAGTTCAGCATGTCTGATGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAGAGGATAGGGGATTTTaGGAGTGGAAACTAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLEDRGF*EWKLGK Trigger: CTTTCCTAGTTTCCACTCCAAAAATCCCCTATCCTC...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAACTCCGTGTGTTTTCTTaGGTTGGTGGTTTAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKLRVFS*VGGLVP Trigger: TGGGACTAAACCACCAACCAAAGAAAACACACGGAG...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | TGTAGCAGTAGATCTGCCCAATCTAGGCGCACAGCATaGAATCATATTAACTGTGTTGTGTTTTCATTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSSRSAQSRRTA*NHINCVVFSLP Trigger: TGGCAATGAAAACACAACACAGTTAATATGATTGCATGCTGTGCGCCTAGATTGGGCAGATCTACTGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | GTTTTCTTTGGTTGGTGGTTTAGTCCCAAGAAGCTCTaGGGTTACTGGTTAGTTCATATTGTTGTTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VFFGWWFSPKKL*GYWLVHIVVPP Trigger: AGGAGGAACAACAATATGAACTAACCAGTAACCCCAGAGCTTCTTGGGACTAAACCACCAACCAAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | AGGCTTTTCACTTTGAGAGGAATAGATTTGAGAGGATaGTTTTCAGATGCAGAACTAGCCAGGTGCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: RLFTLRGIDLRG*FSDAELARCRT Trigger: AGTTCTGCACCTGGCTAGTTCTGCATCTGAAAACCATCCTCTCAAATCTATTCCTCTCAAAGTGAAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTATCTCTAACTCCTTCATaGGGGACCCTGTGCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLSLTPS*GTLCSV Trigger: GACAGAGCACAGGGTCCCCAATGAAGGAGTTAGAGA...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | CCCTGTCTTGGATTCAAAGAAGAAACTGAGCATCTTTaGGTTACTCTAGTTGTGGTGAAAGTCACTAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PCLGFKEETEHL*VTLVVVKVTRQ Trigger: TTGCCTAGTGACTTTCACCACAACTAGAGTAACTCAAAGATGCTCAGTTTCTTCTTTGAATCCAAGACAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | GATCTGCCCAATCTAGGTGCACAGCTTGTAAGCATATaGATTAAATCATGCTTTCATTGCCGGGGCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: DLPNLGAQLVSI*IKSCFHCRGLF Trigger: AAATAAGCCCCGGCAATGAAAGCATGATTTAATTCATATGCTTACAAGCTGTGCACCTAGATTGGGCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | CCACCTTTGGGTAGCTTCTTTCTTGAAGATTTCCCCTaGACTAAGAGTATGTCACAAAATCATAAGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: PPLGSFFLEDFP*TKSMSQNHKHM Trigger: CATGTGCTTATGATTTTGTGACATACTCTTAGTGCAGGGGAAATCTTCAAGAAAGAAGCTACCCAAAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCGCTGACAAGCCACCTTaGGGTAGCTTCTTTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VKVTRQELAHFIYRYNTVADKPP*GSFFLE Trigger: TTCAAGAAAGAAGCTACCCAAAGGTGGCTTGTCAGC...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTTGCTGCAAACGGATTTaGTTCTTTAGGATTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVCCKRI*FFRILQ Trigger: CTGTAAAATCCTAAAGAACAAAATCCGTTTGCAGCA...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATGTGTTGTGTTTTCATaGCCAAGGCATATTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLCVVFS*PRHIWV Trigger: AACCCAAATATGCCTTGGCAATGAAAACACAACACA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | CCTTCCTTCAAAAATATCTCAACGCCCATATCAGCTTaGAGAAGTTATGAAGATTCATCATCCCAGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSFKNISTPISA*RSYEDSSSQFP Trigger: AGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTGAGATATTTTTGAAGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | CCTGTGATTTGGAACTATATAGGGATTATTAGTTACTaGCTCCAAGTAGAGACAGCAGTGATAATTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PVIWNYIGIISY*LQVETAVIIAC Trigger: GCAGGCAATTATCACTGCTGTCTCTACTTGGAGTCAGTAACTAATAATCCCTATATAGTTCCAAATCACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CCA 72 bp | TTAAATCATGCTTTCATTGCCGGGGCTTATTTGGGATaGAGATTTAACACAACAAAATGGCGCCCAACATAT | + |
|
Preference number: 3 (lower is better) Translates to: LNHAFIAGAYLG*RFNTTKWRPTY Trigger: ATATGTTGGGCGCCATTTTGTTGTGTTAAATCTCCATCCCAAATAAGCCCCGGCAATGAAAGCATGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAGAGCTGCAGTTCATGTaGTATCAGTGTGTATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLELQFM*YQCVSA Trigger: AGCTGATACACACTGATACAACATGAACTGCAGCTC...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCATTGCCAAGGCATATTaGGGTTGGAGAGATTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: VKVTRQELAHFIYRYNTVIAKAY*GWRDLL Trigger: CAGTAAATCTCTCCAACCCAAATATGCCTTGGCAAT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCCCCAGGCTTTTCACTTaGAGAGGAATAGATTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VKVTRQELAHFIYRYNTVPRLFT*RGIDLR Trigger: TCTCAAATCTATTCCTCTCAAAGTGAAAAGCCTGGG...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | ATATACAGCCTTGGTGAATTTCATCATCAGACATGCTaGACTGACTTGCCTGAACTGATATCTTGGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IYSLGEFHHQTC*TDLPELISWFF Trigger: GAAAAACCAAGATATCAGTTCAGGCAAGTCAGTTCAGCATGTCTGATGATGAAATTCACCAAGGCTGTATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | AATCTCTCTTCACACAATTTTCGATCATCAGTGAGCTaGAGTTCATGTTGTATCAGTGTGTATCAGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLSSHNFRSSVS*SSCCISVYQLK Trigger: CTTTAGCTGATACACACTGATACAACATGAACTGCAGCTCACTGATGATCGAAAATTGTGTGAAGAGAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | CAGCATGCAATCATATTAACTGTGTTGTGTTTTCATTaGCAAGGCATATTTGGGTTGGAGAGATTTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QHAIILTVLCFH*QGIFGLERFTA Trigger: TGCAGTAAATCTCTCCAACCCAAATATGCCTTGGCAATGAAAACACAACACAGTTAATATGATTGCATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR-3UTR CAA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAATCATATTAACTGTGTaGTGTTTTCATTGCCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLIILTV*CFHCQG Trigger: GCCTTGGCAATGAAAACACAACACAGTTAATATGAT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | GTTAGGGTGTTTTCAGTTATTTTAATCAGAAATGGCTaGGAGAGGTTCAGAGAACAGTTCAGATTACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRVFSVILIRNG*ERFREQFRLLH Trigger: ATGAAGTAATCTGAACTGTTCTCTGAACCTCTCTCAGCCATTTCTGATTAAAATAACTGAAAACACCCTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR GCA 72 bp | TTTTACCCAGCACATGTTCAAAGTCTGGCCTTAGCTTaGTTACACATAACAGATTCAAATGAAAACTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: FYPAHVQSLALA*LHITDSNENLH Trigger: ATGTAAGTTTTCATTTGAATCTGTTATGTGTAAGCAAGCTAAGGCCAGACTTTGAACATGTGCTGGGTAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR TCA 72 bp | ATGACTTATCCATTAGACAATCTTGGAACAGCCATTTaGAAGAGTCTCAGTGAATTCAAAGATCATGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: MTYPLDNLGTAI*KSLSEFKDHDH Trigger: ATGATCATGATCTTTGAATTCACTGAGACTCTTTCAAATGGCTGTTCCAAGATTGTCTAATGGATAAGTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACAGCCAGTCCAGTACGATaGTCCCGGGGCCCCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTASPVR*SRGPHH Trigger: GTGATGGGGGCCCCGGGATCATCGTACTGGACTGGC...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACAGTGACCCCCAGCCACTaGTTATCCCTCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTVTPSH*LSLSSR Trigger: CCTGGAGGAGAGGGATAACCAGTGGCTGGGGGTCAC...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | CAGAGAAGCATCTACACCAGAGAGAGCCTTCCCTGTTaGCTTCCCTATGTCCTTTGTTCCCTACCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRSIYTRESLPC*LPYVLCSLPCL Trigger: GAGGCAGGGTAGGGAACAAAGGACATAGGGAAGCAAACAGGGAAGGCTCTCTCTGGTGTAGATGCTTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAGTAGCCAAACAGCGTaGCGGAGGGGCCCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVSSQTA*RRGPGT Trigger: TGTACCAGGGCCCCTCCGGCACGCTGTTTGGCTACT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAACAGCGCTTCGACCCGTaGCTGTGCAGCACCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKQRFDP*LCSTTE Trigger: CTCGGTGGTGCTGCACAGCCACGGGTCGAAGCGCTG...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | AGGTCACCTCTCCGGTACATCCAGAGCTTTAGTGTTTaGCTTCACTCATCCACCGAAGCTGACAAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLRYIQSFSV*LHSSTEADKPP Trigger: AGGTGGCTTGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGAGAGGTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | CCTTCAGCTCCTTGGGTATTTTCTCTAACTCCTTCATaGGGGACCCTGTGCTCTGTCAATAGGAGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSAPWVFSLTPS*GTLCSVNRRRG Trigger: GCCTCTCCTCCTATTGACAGAGCACAGGGTCCCCAATGAAGGAGTTAGAGAAAATACCCAAGGAGCTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTCCCAGGATTGACCACTaGGGCATTAGAGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVPRIDH*GIREPA Trigger: AGCTGGCTCTCTAATGCCTCAGTGGTCAATCCTGGG...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACACGTTTGGTGATCACATaGTGCCCAAGGTGGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTRLVIT*CPRWYV Trigger: CACATACCACCTTGGGCATCATGTGATCACCAAACG...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | TTGCTTCACTCATCCACCGAAGCTGACAAGCCACCTTaGGGTAGCTTCTTTCTTGAAGATTTCCCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSSTEADKPP*GSFFLEDFPCT Trigger: AGTGCAGGGGAAATCTTCAAGAAAGAAGCTACCCAAAGGTGGCTTGTCAGCTTCGGTGGATGAGTGAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATCCCTGATGGTGCTCTaGATGGGAGCTCCAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLSLMVL*MGAPTR Trigger: CCTTGTTGGAGCTCCCATGCAGAGCACCATCAGGGA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACAAGGCAAGCTTCACTATaGCTGAGCTCTCAGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTRQASL*LSSQSL Trigger: AAGTGACTGAGAGCTCAGGCATAGTGAAGCTTGCCT...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACAGTCTTTCCGCATGAATaGCTGGTGTGTCCTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTVFPHE*LVCPTF Trigger: AAATGTAGGACACACCAGGCATTCATGCGGAAAGAC...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTTTCTCTGTGAGTAGGTaGAGGAGATTCCATCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVFSVSR*RRFHRL Trigger: GAGTCGATGGAATCTCCTCCACCTACTCACAGAGAA...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAACATCCATTTCCAAGATaGATGGCCTGCCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKHPFPR*MACPPA Trigger: AGCTGGAGGGCAGGCCATCCATCTTGGAAATGGATG...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | CCGAAGCTGACAAGCCACCTTTGGGTAGCTTCTTTCTaGAAGATTTCCCCTGCACTAAGAGTATGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKLTSHLWVASF*KISPALRVCHK Trigger: TTTGTGACATACTCTTAGTGCAGGGGAAATCTTCAAGAAAGAAGCTACCCAAAGGTGGCTTGTCAGCTTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTGGTTTGGATTCTTTCTaGTCCCGCATCTGTAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVGLDSF*SRICKS Trigger: CGATTTACAGATGCGGGATCAGAAAGAATCCAAACC...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCAGAAGCCATCTGCATTaGGGTCCACAGCGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVRSHLH*GPQRRQ Trigger: CTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTACCTCATGTGCCCTGCTaGGTGAGCTCACATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLPHVPC*VSSHPG Trigger: TCCTGGATGTGAGCTCACTCAGCAGGGCACATGAGG...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTCATTGCTTTTGCTGTTaGCATAACTCCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVHCFCC*HNSSCL Trigger: GAGACAGCTGGAGTTATGTCAACAGCAAAAGCAATG...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTGACTTCGGTAGTATGTaGACTTCGAAAATGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVDFGSM*TSKMSS Trigger: GCTGGACATTTTCGAAGTCCACATACTACCGAAGTC...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAATCCAACAAGGAGATCTaGGAAGCCATCTGCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKSNKEI*EAICIE Trigger: CTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGA...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACATCCTTAATGATTTGCTaGTTTGCTGTCCTTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTSLMIC*FAVLQF Trigger: GAATTGAAGGACAGCAAATCAGCAAATCATTAAGGA...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACATGCATCAATTTGTCCTaGGATAGATTGTCCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTCINLS*DRLSKH Trigger: ATGTTTGGACAATCTATCTCAGGACAAATTGATGCA...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAATTTTCTTTCTTCTGCTaGAGGATCGGCTGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKFSFFC*RIGWSG Trigger: ACCACTCCAGCCGATCCTTCAGCAGAAGAAAGAAAA...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCATGTGCCCTGCTGAGTaGGCTCACATCCAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVMCPAE*AHIQEK Trigger: TTTCTCCTGGATGTGAGCTCACTCAGCAGGGCACAT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACACTTTTATTTCAAACTTaGGTGATGAGGTCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTLLFQT*VMRSHP Trigger: TGGATGAGACCTCATCACTCAAGTTTGAAATAAAAG...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAGCCTGGGACCTCTTTaGCTTTATATGAGAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVSLGPL*LYMRNT Trigger: TGTGTTTCTCATATAAAGGCAAAGAGGTCCCAGGCT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAGCATTATGGTCTTCATaGTCCCAACAGCAAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLALWSS*SQQQDR Trigger: CCTATCTTGCTGTTGGGAGCATGAAGACCATAATGC...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAAGCTGAATATGAACGCTaGCTTCCTTCCCACTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKAEYER*LPSHFP Trigger: TGGAAAGTGGGAAGGAAGCCAGCGTTCATATTCAGC...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | AACTACATAGTCTCAGGCGAGCCCAGGCTTTTCACTTaGAGAGGAATAGATTTGAGAGGATGGTTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NYIVSGEPRLFT*RGIDLRGWFSD Trigger: ATCTGAAAACCATCCTCTCAAATCTATTCCTCTCAAAGTGAAAAGCCTGGGCTCGCCTGAGACTATGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACACTGTCTGTCTACAAATaGTTTGTATTGGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTSRALVFCFTHPPKLTLSVYK*FVLVCS Trigger: ACTACAAACCAATACAAAGCATTTGTAGACAGACAG...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCTTTTCACAGGAGGCATaGACACTGATGCTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVFSQEA*TLMLRS Trigger: GGACCTCAGCATCAGTGTGCATGCCTCCTGTGAAAA...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTTGTTTAAAATGGCATTaGCCTGTAGTTGTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVCLKWH*PVVVWT Trigger: TGTCCAGACAACTACAGGGCAATGCCATTTTAAACA...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACAAAACGATGTAGCCTaGGACCTCTTTGCCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLQNDVA*DLFAFI Trigger: TATAAAGGCAAAGAGGTCCCAGGCTACATCGTTTTG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCGATCGGCTGGAGTGGTaGAAATTCCTCAGTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVDRLEW*KFLSVS Trigger: CGAAACACTGAGGAATTTCCACCACTCCAGCCGATC...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAAGGCCTGTGGGGAGTTaGACATTCAGAGTGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLRPVGS*TFRVVS Trigger: CGAAACCACTCTGAATGTCCAACTCCCCACAGGCCT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCCATTTCCAAGATGGATaGCCTGCCCTCCAGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVHFQDG*PALQLN Trigger: ATTCAGCTGGAGGGCAGGCCATCCATCTTGGAAATG...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACCTTCCAAGAAAACATaGGCCACGTTCTCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLPSKKT*ATFSSL Trigger: TAAAGATGAGAACGTGGCCCATGTTTTCTTGGAAGG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | GTGGGCTGCACGGGAATTTTGGGTTTAAATCCTGGTTaGACAAACTGCTTCTTAAAACCAGGTATAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGCTGILGLNPG*TNCFLKPGIER Trigger: TCTTTCTATACCTGGTTTTAAGAAGCAGTTTGTCAAACCAGGATTTAAACCCAAAATTCCCGTGCAGCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAGCAAATCAGAAGGCATaGCGTAGCAAATGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLANQKA*RSKCQW Trigger: CCACTGGCATTTGCTACGTCATGCCTTCTGATTTGC...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTGTTGATCAGCTTTCATaGAATACAGGAGTCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVVDQLS*NTGVSY Trigger: ATAAGAGACTCCTGTATTGCATGAAAGCTGATCAAC...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCTTCGCAGGTCTGGTTTaGATTCTTTCTGATCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVFAGLV*ILSDPA Trigger: TGCGGGATCAGAAAGAATCCAAACCAGACCTGCGAA...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCGGCCATGCATGTTTCTaGCTCGTTTTCTTCGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVGHACF*LVFFAR Trigger: TCTAGCGAAGAAAACGAGCCAGAAACATGCATGGCC...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAAAGAATCAGATTGAAATaGACCAACGGCTACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKRIRLK*TNGYIN Trigger: GTTGATGTAGCCGTTGGTGCATTTCAATCTGATTCT...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTACAAAAATCCAACTTTTaGAGAAACTTGGAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLQKSNF*RNLEIS Trigger: GCTGATCTCCAAGTTTCTGCAAAAGTTGGATTTTTG...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCAGCTGTTCGCAGGTCTaGTTTGGATTCTTTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVSCSQV*FGFFLI Trigger: GATCAGAAAGAATCCAAACCAGACCTGCGAACAGCT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | TCCCTAAGCTTTGCGGCTGCGGGTGGTTATTATAGGTaGTCTTTGATACTAAAAATTTTGAAGTACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSFAAAGGYYR*SLILKILKYKA Trigger: AGCCTTGTACTTCAAAATTTTTAGTATCAAAGACAACCTATAATAACCACCCGCAGCCGCAAAGCTTAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | ACTCATATTCTGTCTAATGTGGGCTGCACGGGAATTTaGGGTTTAAATCCTGGTTTGACAAACTGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: THILSNVGCTGI*GLNPGLTNCFL Trigger: TAAGAAGCAGTTTGTCAAACCAGGATTTAAACCCAAAATTCCCGTGCAGCCCACATTAGACAGAATATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | TATGAATTAAATCATGCTTTCATTGCCGGGGCTTATTaGGGATGGAGATTTAACACAACAAAATGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YELNHAFIAGAY*GWRFNTTKWRP Trigger: TGGGCGCCATTTTGTTGTGTTAAATCTCCATCCCAAATAAGCCCCGGCAATGAAAGCATGATTTAATTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCAGACTCCCCAAATCTTaGAGCATATTTGTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVRLPKS*SIFVTS Trigger: GGAAGTGACAAATATGCTGCAAGATTTGGGGAGTCT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCGTCGTCTTCTTGTGGTaGACCAATAGCAATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVVVFLW*TNSNIF Trigger: GAAGATATTGCTATTGGTGCACCACAAGAAGACGAC...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | ACAGCATGCAATCATATTAACTGTGTTGTGTTTTCATaGCCAAGGCATATTTGGGTTGGAGAGATTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TACNHINCVVFS*PRHIWVGEIYC Trigger: GCAGTAAATCTCTCCAACCCAAATATGCCTTGGCAATGAAAACACAACACAGTTAATATGATTGCATGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | AGGTATTTACACATTCTAGAGTTATATGGATCAGATTaGATAGAAGGAGACCCCCTGAGAACTAGATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYLHILELYGSD*IEGDPLRTRFL Trigger: CAGGAATCTAGTTCTCAGGGGGTCTCCTTCTATCAAATCTGATCCATATAACTCTAGAATGTGTAAATACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCATGCATGCACACAGATaGAAGTCCATTTTCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVMHAHR*KSIFST Trigger: TGTACTGAAAATGGACTTCCATCTGTGTGCATGCAT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCCCAGTGTTTATAACATaGAAAGTGAGGTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVPVFIT*KVRFSF Trigger: GAAGCTGAACCTCACTTTCCATGTTATAAACACTGG...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAAATAACTTTTGGGTGTaGCTCTGGAAAAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLNNFWV*LWKSCC Trigger: GCAACAGCTTTTCCAGAGCCACACCCAAAAGTTATT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | ACACAATTTTCGATCATCAGTGAGCTGCAGTTCATGTaGTATCAGTGTGTATCAGCTAAAGTGCGATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TQFSIISELQFM*YQCVSAKVRYL Trigger: TAAATATCGCACTTTAGCTGATACACACTGATACAACATGAACTGCAGCTCACTGATGATCGAAAATTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAGGACATCCAAAACGTTaGACAACTTATCATCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLGHPKR*TTYHLE Trigger: CTCAAGATGATAAGTTGTTCAACGTTTTGGATGTCC...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTATCTTTGATAGGAATTTaGCTATATCGGTCAACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLSLIGI*LYRSTS Trigger: GGACGTTGACCGATATAGTCAAATTCCTATCAAAGA...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTATTTCACACTAACATTTaGAGCCATGCTAATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLFHTNI*SHANPS Trigger: ACTGGGATTAGCATGGCTCCAAATGTTAGTGTGAAA...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR TCA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTACTCTTTGCCTTTATATaGGAAACACAGTGTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLLFAFI*ETQCKM Trigger: CATCTTACACTGTGTTTCTCATATAAAGGCAAAGAG...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR GCA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCAATGATTTGCTGATTTaGTGTCCTTCAATTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKVTRQELAHFIYRYNTVNDLLI*CPSILC Trigger: ACAGAGAATTGAAGGACAGCAAATCAGCAAATCATT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| 3UTR CAA 72 bp | TATTTTCAGTTAATATCAGTCATTCTTGGATTTATGTaGAGGTTGAAAAACTACATAGTCTCAGGCGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFQLISVILGFM*RLKNYIVSGEP Trigger: GGGCTCGCCTGAGACTATGTAGTTTTTCAACCTCAACATAAATCCAAGAATGACTGATATTAACTGAAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | CACCGAGTAGCCAAACAGCGTGCCGGAGGGGCCCTGGTACAGCAGTaGATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGTTGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRVAKQRAGGALVQQ*ILRVQVVGVPGWHP Trigger: GGGGTGCCAACCGGGCACTCCTACAACCTGGACCCGGAGAATGCACTGCTGTACCAGGGCCCCTCCGGCACGCTGTTTGGCTACTCGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | GCTTCGACCCGTGGCTGTGCAGCACCACCGAGTAGCCAAACAGCGTaGCGGAGGGGCCCTGGTACAGCAGTGCATTCTCCGGGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASTRGCAAPPSSQTA*RRGPGTAVHSPGPG Trigger: ACCTGGACCCGGAGAATGCACTGCTGTACCAGGGCCCCTCCGGCACGCTGTTTGGCTACTCGGTGGTGCTGCACAGCCACGGGTCGAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 90 bp | GTACAGCAGTGCATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGTTaGCACCCCGAAGTACAACAACAGCATCACCGCTTCCCGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQQCILRVQVVGVPG*HPEVQQQHHRFPEG Trigger: GCCCTCCGGGAAGCGGTGATGCTGTTGTTGTACTTCGGGGTGCCAACCGGGCACTCCTACAACCTGGACCCGGAGAATGCACTGCTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | ATTCTTTCTGATCCCGCATCTGTAAATCGCCCCAGGATTGACCACTaGGGCATTAGAGAGCCAGCTGGCAGTGGGAGCCCCCACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSDPASVNRPRIDH*GIREPAGSGSPHDE Trigger: CTCATCGTGGGGGCTCCCACTGCCAGCTGGCTCTCTAATGCCTCAGTGGTCAATCCTGGGGCGATTTACAGATGCGGGATCAGAAAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | TTCCTCCCTGATGGTGCTCTGCATGGGAGCTCCAACAAGGAGATCTaGGAAGCCATCTGCATTGAGGTCCACAGCGCAGACAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPDGALHGSSNKEI*EAICIEVHSADRSS Trigger: GGAGCTTCTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGAGCACCATCAGGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | TTGTCCCTCACTTGGTCCAATTCGCCCTCGTTTTCACAGGAGGCATaGACACTGATGCTGAGGTCCTCATGTGCCCTGCTGAGTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLTWSNSPSFSQEA*TLMLRSSCALLSEL Trigger: GAGCTCACTCAGCAGGGCACATGAGGACCTCAGCATCAGTGTGCATGCCTCCTGTGAAAACGAGGGCGAATTGGACCAAGTGAGGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 90 bp | CTCTCCACTGGGGCTACCCAGCTGGAGCTGTTCGCAGGTCTGGTTTaGATTCTTTCTGATCCCGCATCTGTAAATCGCCCCAGGATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSTGATQLELFAGLV*ILSDPASVNRPRID Trigger: GTCAATCCTGGGGCGATTTACAGATGCGGGATCAGAAAGAATCCAAACCAGACCTGCGAACAGCTCCAGCTGGGTAGCCCCAGTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | TCTGCATGGGAGCTCCAACAAGGAGATCTGAGAAGCCATCTGCATTaGGGTCCACAGCGCAGACAGAAGCTCCAAAGTATGAGCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAWELQQGDLRSHLH*GPQRRQKLQSMSQA Trigger: AGCTTGGCTCATACTTTGGAGCTTCTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | GAAGGATCGGCTGGAGTGGTGGAAATTCCTCAGTGTTTCGTTTGGTaGTCACATGATGCCCAAGGTGGTATGTGGCCTCTACATGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: EGSAGVVEIPQCFVW*SHDAQGGMWPLHEW Trigger: CCATTCATGTAGAGGCCACATACCACCTTGGGCATCATGTGATCACCAAACGAAACACTGAGGAATTTCCACCACTCCAGCCGATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | GAGTTGATGTACACGAATACTCTTCCTTCCTCCCTGATGGTGCTCTaGATGGGAGCTCCAACAAGGAGATCTGAGAAGCCATCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ELMYTNTLPSSLMVL*MGAPTRRSEKPSAL Trigger: CAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGAGCACCATCAGGGAGGAAGGAAGAGTATTCGTGTACATCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACAGCATCATCGCCAGCGTaGAACAAGGACACGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGTSRALVFCFTHPPKLTASSPA*NKDTFS Trigger: GCTAAACGTGTCCTTGTTCAACGCTGGCGATGATGC...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACACACTGCAGAATCAGATaGAAATGCACCAACGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGTSRALVFCFTHPPKLTHCRIR*KCTNGY Trigger: GTAGCCGTTGGTGCATTTCAATCTGATTCTGCAGTG...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | GGCGATCCACATATATGTAACCTAGGCTGCAGGCAAGCTTCACTATaGCTGAGCTCTCAGTCACTTCGCAGTTTATTTGTTTCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDPHICNLGCRQASL*LSSQSLRSLFVSLP Trigger: TGGAAGAGAAACAAATAAACTGCGAAGTGACTGAGAGCTCAGGCATAGTGAAGCTTGCCTGCAGCCTAGGTTACATATATGTGGATCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAAGAGAAGCCATCTGCATaGAGGTCCACAGCGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKEKPSA*RSTAQT Trigger: TGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTC...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | TTTCCGCATGAATGCCTGGTGTGTCCTACATTTCTCTCCACTGCTTaGAACTCGTATGCTTCCTGTAATCACGTCAGAAGTCCCATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPHECLVCPTFLSTA*NSYASCNHVRSPIR Trigger: TCTAATGGGACTTCTGACGTGATTACAGGAAGCATACGAGTTTCAAGCAGTGGAGAGAAATGTAGGACACACCAGGCATTCATGCGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 90 bp | TTCACACTAACATTTGGAGCCATGCTAATCCCAGTGTTTATAACATaGAAAGTGAGGTTCAGCTTCTCGGCCATGCATGTTTCTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FTLTFGAMLIPVFIT*KVRFSFSAMHVSGS Trigger: CGAGCCAGAAACATGCATGGCCGAGAAGCTGAACCTCACTTTCCATGTTATAAACACTGGGATTAGCATGGCTCCAAATGTTAGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 90 bp | GTCATTGTCAATGTCGCCAAGATTCGCTATAGACTCCCCAAATCTTaGAGCATATTTGTCACTTCCGACAAGGACCCTTTCCATTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VIVNVAKIRYRLPKS*SIFVTSDKDPFHFN Trigger: GTTGAAATGGAAAGGGTCCTTGTCGGAAGTGACAAATATGCTGCAAGATTTGGGGAGTCTATAGCGAATCTTGGCGACATTGACAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 90 bp | TCTAATAACGTCTTTTTCTTTCTTCTGCTGAAGGATCGGCTGGAGTaGTGGAAATTCCTCAGTGTTTCGTTTGGTGATCACATGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNNVFFFLLLKDRLE*WKFLSVSFGDHMMP Trigger: GGGCATCATGTGATCACCAAACGAAACACTGAGGAATTTCCACCACTCCAGCCGATCCTTCAGCAGAAGAAAGAAAAAGACGTTATTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | ACAATCACTACAGGCCTTGTCCTTAGCAACACTGCAGAATCAGATTaGAATGCACCAACGGCTACATCAACATATCCATTGTTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TITTGLVLSNTAESD*NAPTATSTYPLLSA Trigger: TGCAGACAACAATGGATATGTTGATGTAGCCGTTGGTGCATTTCAATCTGATTCTGCAGTGTTGCTAAGGACAAGGCCTGTAGTGATTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS TCA 90 bp | TCCTGTAATCACGTCAGAAGTCCCATTAGAGAAGAAATAAAATCTTaGCGGAGACTCTGCCTTCCTGTGCACATCCAAGCTCACATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCNHVRSPIREEIKS*RRLCLPVHIQAHIV Trigger: TACAATGTGAGCTTGGATGTGCACAGGAAGGCAGAGTCTCCGTCAAGATTTTATTTCTTCTCTAATGGGACTTCTGACGTGATTACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAAATCTTGCAGCATATTaGTCACTTCCGACAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLNLAAY*SLPTRT Trigger: GGTCCTTGTCGGAAGTGACAAATATGCTGCAAGATT...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTATCTTCAAAGCCGTCATaGTCAATGTCGCCAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLSSKPS*SMSPRF Trigger: GAATCTTGGCGACATTGACAATGACGGCTTTGAAGA...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGTACATCCAGAGCTTTAGTGTTTTGCTTCACTCATCCACCGAAGCTGACATCAACATATCCATTGTaGTCTGCATCAATTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTSRALVFCFTHPPKLTSTYPL*SASICP Trigger: AGGACAAATTGATGCAGACAACAATGGATATGTTGA...TGTCAGCTTCGGTGGATGAGTGAAGCAAAACACTAAAGCTCTGGATGTACCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTAGAAGAAATAAAATCTaGACGGAGACTCTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVRRNKI*TETLPS Trigger: GGAAGGCAGAGTCTCCGTCAAGATTTTATTTCTTCT...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAATTTCTCTCCACTGCTaGAAACTCGTATGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLISLHC*KLVCFL Trigger: CAGGAAGCATACGAGTTTCAAGCAGTGGAGAGAAAT...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | CAACGCCCATATCAGCTTGAAGAAGTTATGAAGATTCATCATCCCAGTTCCCTAAACTTTTGCAGAAACTaGGAGATCAGCAGAGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QRPYQLEEVMKIHHPSSLNFCRN*EISRAI Trigger: AATTGCTCTGCTGATCTCCAAGTTTCTGCAAAAGTT...TAGGGAACTGGGATGATGAATCTTCATAACTTCTTCAAGCTGATATGGGCGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTGAGGGAGAAAAGAATTaGGTACCATTATTTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVEGEKN*VPLFSH Trigger: GTGTGAAAATAATGGTACCAAATTCTTTTCTCCCTC...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGTTTTCCTGGTTACCAGCTGAAGGATATGCTGATTTGGGGAAAGGTTGAACAACTTATCATCTaGAGGGAGAAAAGAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTGFPGYQLKDMLIWGKVEQLII*REKRIW Trigger: CCAAATTCTTTTCTCCCTCAAGATGATAAGTTGTTC...AACCTTTCCCCAAATCAGCATATCCTTCAGCTGGTAACCAGGAAAACCTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGTCACTAGGCAAGAATTGGCTCATTTCATCTACAGATATAATACTGTCATGTCGTTTGGGTCTTaGATGATGGAGCCCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VKVTRQELAHFIYRYNTVMSFGS*MMEPFQ Trigger: TTGGAAGGGCTCCATCATCAAAGACCCAAACGACAT...GACAGTATTATATCTGTAGATGAAATGAGCCAATTCTTGCCTAGTGACTTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GGTTTTCAGTGCAATGATCCACATTTAACTCTCCTCAGAGACCATTCCTTGAAAGCTTTTATTTCAAACTaGAGTGATGAGGTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GFQCNDPHLTLLRDHSLKAFISN*SDEVSS Trigger: GGATGAGACCTCATCACTCAAGTTTGAAATAAAAGC...TTTCAAGGAATGGTCTCTGAGGAGAGTTAAATGTGGATCATTGCACTGAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS-3UTR CAA 90 bp | GATACTAAAAATTTTGAAGTACAAGGCTTAGACCCAGTCCTTCAATTGCTGTTAAACATCCTTAATGATTaGCTGATTTGCTGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DTKNFEVQGLDPVLQLLLNILND*LICCPS Trigger: TGAAGGACAGCAAATCAGCAAATCATTAAGGATGTT...TAACAGCAATTGAAGGACTGGGTCTAAGCCTTGTACTTCAAAATTTTTAGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS GCA 72 bp | GCCAAACAGCGTGCCGGAGGGGCCCTGGTACAGCAGTaGATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AKQRAGGALVQQ*ILRVQVVGVPG Trigger: ACCGGGCACTCCTACAACCTGGACCCGGAGAATGCACTGCTGTACCAGGGCCCCTCCGGCACGCTGTTTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CAA 90 bp | GGTACAGCAGTGCATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGTaGGCACCCCGAAGTACAACAACAGCATCACCGCTTCCCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTAVHSPGPGCRSAR*APRSTTTASPLPGG Trigger: CCCTCCGGGAAGCGGTGATGCTGTTGTTGTACTTCGGGGTGCCAACCGGGCACTCCTACAACCTGGACCCGGAGAATGCACTGCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 72 bp | TCTCCTCCAGGCATGTCTTCCCACAAGGCTCTCCACTaGGGCTACCCAGCTGGAGCTGTTCGCAGGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPPGMSSHKALH*GYPAGAVRRSG Trigger: ACCAGACCTGCGAACAGCTCCAGCTGGGTAGCCCCAGTGGAGAGCCTTGTGGGAAGACATGCCTGGAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 72 bp | TGCATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGTTaGCACCCCGAAGTACAACAACAGCATCACCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CILRVQVVGVPG*HPEVQQQHHRF Trigger: GAAGCGGTGATGCTGTTGTTGTACTTCGGGGTGCCAACCGGGCACTCCTACAACCTGGACCCGGAGAATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CAA 72 bp | GTGCATTCTCCGGGTCCAGGTTGTAGGAGTGCCCGGTaGGCACCCCGAAGTACAACAACAGCATCACCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VHSPGPGCRSAR*APRSTTTASPL Trigger: AAGCGGTGATGCTGTTGTTGTACTTCGGGGTGCCAACCGGGCACTCCTACAACCTGGACCCGGAGAATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
||
| CDS CCA 72 bp | GGGGCTACCCAGCTGGAGCTGTTCGCAGGTCTGGTTTaGATTCTTTCTGATCCCGCATCTGTAAATCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GATQLELFAGLV*ILSDPASVNRP Trigger: GGGGCGATTTACAGATGCGGGATCAGAAAGAATCCAAACCAGACCTGCGAACAGCTCCAGCTGGGTAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | GATGGTGCTCTGCATGGGAGCTCCAACAAGGAGATCTaGGAAGCCATCTGCATTGAGGTCCACAGCGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: DGALHGSSNKEI*EAICIEVHSAD Trigger: GTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGAGCACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 90 bp | CTCTGCATGGGAGCTCCAACAAGGAGATCTGAGAAGCCATCTGCATaGAGGTCCACAGCGCAGACAGAAGCTCCAAAGTATGAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCMGAPTRRSEKPSA*RSTAQTEAPKYEPS Trigger: GCTTGGCTCATACTTTGGAGCTTCTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | GAGCTCCAACAAGGAGATCTGAGAAGCCATCTGCATTaGGGTCCACAGCGCAGACAGAAGCTCCAAAGTATG | + |
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Preference number: 6 (lower is better) Translates to: ELQQGDLRSHLH*GPQRRQKLQSM Trigger: CATACTTTGGAGCTTCTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | CACACTGATGCTGAGGTCCTCATGTGCCCTGCTGAGTaGGCTCACATCCAGGAGAAAGCTAATGTCTATCCT | + |
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Preference number: 6 (lower is better) Translates to: HTDAEVLMCPAE*AHIQEKANVYP Trigger: AGGATAGACATTAGCTTTCTCCTGGATGTGAGCTCACTCAGCAGGGCACATGAGGACCTCAGCATCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS GCA 72 bp | TACACGAATACTCTTCCTTCCTCCCTGATGGTGCTCTaGATGGGAGCTCCAACAAGGAGATCTGAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: YTNTLPSSLMVL*MGAPTRRSEKP Trigger: TGGCTTCTCAGATCTCCTTGTTGGAGCTCCCATGCAGAGCACCATCAGGGAGGAAGGAAGAGTATTCGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | AGAGGTATCGTTAAGGTCACTCTGTTGTCCCTCACTTaGTCCAATTCGCCCTCGTTTTCACAGGAGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RGIVKVTLLSLT*SNSPSFSQEAC Trigger: GCATGCCTCCTGTGAAAACGAGGGCGAATTGGACCAAGTGAGGGACAACAGAGTGACCTTAACGATACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | GGAGCTCCAACAAGGAGATCTGAGAAGCCATCTGCATaGAGGTCCACAGCGCAGACAGAAGCTCCAAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: GAPTRRSEKPSA*RSTAQTEAPKY Trigger: ATACTTTGGAGCTTCTGTCTGCGCTGTGGACCTCAATGCAGATGGCTTCTCAGATCTCCTTGTTGGAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 90 bp | ACAAGGACCCTTTCCATTTCAACCATCACAGCTCCCATGCCAGAGTaGATGTACACGAATACTCTTCCTTCCTCCCTGATGGTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TRTLSISTITAPMPE*MYTNTLPSSLMVLC Trigger: GCAGAGCACCATCAGGGAGGAAGGAAGAGTATTCGTGTACATCAACTCTGGCATGGGAGCTGTGATGGTTGAAATGGAAAGGGTCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | GCTGGAGTGGTGGAAATTCCTCAGTGTTTCGTTTGGTaGTCACATGATGCCCAAGGTGGTATGTGGCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: AGVVEIPQCFVW*SHDAQGGMWPL Trigger: TAGAGGCCACATACCACCTTGGGCATCATGTGATCACCAAACGAAACACTGAGGAATTTCCACCACTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | AGATGGATGGCCTGCCCTCCAGCTGAATATGAACGCTaGCTTCCTTCCCACTTTCCATTTTTCCGAAATTGC | + |
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Preference number: 6 (lower is better) Translates to: RWMACPPAEYER*LPSHFPFFRNC Trigger: GCAATTTCGGAAAAATGGAAAGTGGGAAGGAAGCCAGCGTTCATATTCAGCTGGAGGGCAGGCCATCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | CTTTCCATTTCAACCATCACAGCTCCCATGCCAGAGTaGATGTACACGAATACTCTTCCTTCCTCCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: LSISTITAPMPE*MYTNTLPSSLM Trigger: CATCAGGGAGGAAGGAAGAGTATTCGTGTACATCAACTCTGGCATGGGAGCTGTGATGGTTGAAATGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 90 bp | ATGTCGCCAAGATTCGCTATAGACTCCCCAAATCTTGCAGCATATTaGTCACTTCCGACAAGGACCCTTTCCATTTCAACCATCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: MSPRFAIDSPNLAAY*SLPTRTLSISTITA Trigger: AGCTGTGATGGTTGAAATGGAAAGGGTCCTTGTCGGAAGTGACAAATATGCTGCAAGATTTGGGGAGTCTATAGCGAATCTTGGCGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | GAATGCCTGGTGTGTCCTACATTTCTCTCCACTGCTTaGAACTCGTATGCTTCCTGTAATCACGTCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ECLVCPTFLSTA*NSYASCNHVRS Trigger: ACTTCTGACGTGATTACAGGAAGCATACGAGTTTCAAGCAGTGGAGAGAAATGTAGGACACACCAGGCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS GCA 72 bp | AATGTCGCCAAGATTCGCTATAGACTCCCCAAATCTTaGAGCATATTTGTCACTTCCGACAAGGACCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: NVAKIRYRLPKS*SIFVTSDKDPF Trigger: GAAAGGGTCCTTGTCGGAAGTGACAAATATGCTGCAAGATTTGGGGAGTCTATAGCGAATCTTGGCGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | GTCTTTTTCTTTCTTCTGCTGAAGGATCGGCTGGAGTaGTGGAAATTCCTCAGTGTTTCGTTTGGTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: VFFFLLLKDRLE*WKFLSVSFGDH Trigger: GTGATCACCAAACGAAACACTGAGGAATTTCCACCACTCCAGCCGATCCTTCAGCAGAAGAAAGAAAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | TGTGGTGCACCAATAGCAATATCTTCAAAGCCGTCATaGTCAATGTCGCCAAGATTCGCTATAGACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: CGAPIAISSKPS*SMSPRFAIDSP Trigger: TGGGGAGTCTATAGCGAATCTTGGCGACATTGACAATGACGGCTTTGAAGATATTGCTATTGGTGCACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 90 bp | TCGTCTTCTTGTGGTGCACCAATAGCAATATCTTCAAAGCCGTCATaGTCAATGTCGCCAAGATTCGCTATAGACTCCCCAAATCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSCGAPIAISSKPS*SMSPRFAIDSPNLA Trigger: TGCAAGATTTGGGGAGTCTATAGCGAATCTTGGCGACATTGACAATGACGGCTTTGAAGATATTGCTATTGGTGCACCACAAGAAGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS TCA 72 bp | ATGCTAAATATATATGCTTTTCCTATCTGTTCGTGTTaGGGGGCTCCTCCCACGACTTCGGTAGTATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: MLNIYAFPICSC*GAPPTTSVVCG Trigger: TCCACATACTACCGAAGTCGTGGGAGGAGCCCCTCAACACGAACAGATAGGAAAAGCATATATATTTAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS GCA 72 bp | AATGTAGACAGCACCTCTCAAGTCGTCTTCTTGTGGTaGACCAATAGCAATATCTTCAAAGCCGTCATTGTC | + |
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Preference number: 6 (lower is better) Translates to: NVDSTSQVVFLW*TNSNIFKAVIV Trigger: GACAATGACGGCTTTGAAGATATTGCTATTGGTGCACCACAAGAAGACGACTTGAGAGGTGCTGTCTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | ACATTTGGAGCCATGCTAATCCCAGTGTTTATAACATaGAAAGTGAGGTTCAGCTTCTCGGCCATGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: TFGAMLIPVFIT*KVRFSFSAMHV Trigger: AACATGCATGGCCGAGAAGCTGAACCTCACTTTCCATGTTATAAACACTGGGATTAGCATGGCTCCAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | AATGCTAAATATATATGCTTTTCCTATCTGTTCGTGTaGAGGGGCTCCTCCCACGACTTCGGTAGTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: NAKYICFSYLFV*RGSSHDFGSMW Trigger: CCACATACTACCGAAGTCGTGGGAGGAGCCCCTCAACACGAACAGATAGGAAAAGCATATATATTTAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | GTAAATGTAGACAGCACCTCTCAAGTCGTCTTCTTGTaGTGCACCAATAGCAATATCTTCAAAGCCGTCATT | + |
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Preference number: 6 (lower is better) Translates to: VNVDSTSQVVFL*CTNSNIFKAVI Trigger: AATGACGGCTTTGAAGATATTGCTATTGGTGCACCACAAGAAGACGACTTGAGAGGTGCTGTCTACATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | CAATACAGGAGTCTCTTATCAGTCTTTGATAGGAATTaGACTATATCGGTCAACGTCCCCGCTATGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QYRSLLSVFDRN*TISVNVPAMPF Trigger: AAAAGGCATAGCGGGGACGTTGACCGATATAGTCAAATTCCTATCAAAGACTGATAAGAGACTCCTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 90 bp | GATGCATGCACACAGATGGAAGTCCATTTTCAGTACAGTCAAACTTaGTCCTATTTACAGACTCAGGATGGCTTAAAGATGCTTCAACAA | + |
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Preference number: 6 (lower is better) Translates to: DACTQMEVHFQYSQT*SYLQTQDGLKMLQQ Trigger: TTGTTGAAGCATCTTTAAGCCATCCTGAGTCTGTAAATAGGACAAAGTTTGACTGTACTGAAAATGGACTTCCATCTGTGTGCATGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CCA 72 bp | GTACAGTCAAACTTTGTCCTATTTACAGACTCAGGATaGCTTAAAGATGCTTCAACAATCACTACAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VQSNFVLFTDSG*LKDASTITTGL Trigger: AAGGCCTGTAGTGATTGTTGAAGCATCTTTAAGCCATCCTGAGTCTGTAAATAGGACAAAGTTTGACTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS CAA 72 bp | ACACAGATGGAAGTCCATTTTCAGTACAGTCAAACTTaGTCCTATTTACAGACTCAGGATGGCTTAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TQMEVHFQYSQT*SYLQTQDGLKM Trigger: CATCTTTAAGCCATCCTGAGTCTGTAAATAGGACAAAGTTTGACTGTACTGAAAATGGACTTCCATCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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| CDS GCA 72 bp | TGCATAAGAAATCTAAACAGTGTTGATCAGCTTTCATaGAATACAGGAGTCTCTTATCAGTCTTTGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: CIRNLNSVDQLS*NTGVSYQSLIG Trigger: TCCTATCAAAGACTGATAAGAGACTCCTGTATTGCATGAAAGCTGATCAACACTGTTTAGATTTCTTATGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099972.5 |
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