Pregenerated sensors for ITGA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001507Ensembl transcript IDs: ENSMUST00000001548.14, ENSMUST00000107739.8, ENSMUST00000120375.8, ENSMUST00000145671.2
Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTaGGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACC | + |
Preference number: 1 (lower is better) Translates to: HTPRGLVGISRPCPG*GGQDGSEVSPLHPT Trigger: GGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR GCA 90 bp | CGTGCTCCCTGGAGGTGGGTAGCGGTCCTCCTCCCGGATACGCACTaGATGGTACTTGGGCATAATCCGGTAGTAGCGGGTCGGCTTAAA | + |
Preference number: 1 (lower is better) Translates to: RAPWRWVAVLLPDTH*MVLGHNPVVAGRLK Trigger: TTTAAGCCGACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAGGAGGACCGCTACCCACCTCCAGGGAGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR TCA 90 bp | TCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTaGAGGATGCCGCCATGCTCCAGGTCAGTCCCAGCACAGTGTGTG | + |
Preference number: 1 (lower is better) Translates to: SSSSYQCLLRQDPAL*RMPPCSRSVPAQCV Trigger: CACACACTGTGCTGGGACTGACCTGGAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | TCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTaGGGATCTCCAGGCCTTGCCCAGGCTGAGGTGGTCAGGATGGAT | + |
Preference number: 1 (lower is better) Translates to: SPAMLHSSITPHVVS*GSPGLAQAEVVRMD Trigger: ATCCATCCTGACCACCTCAGCCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR GCA 90 bp | CCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTaGTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCAGGGCCC | + |
Preference number: 1 (lower is better) Translates to: PLAVGPVCVSTVQGL*WAQHCKVLKEIPGP Trigger: GGGCCCTGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | AACATCCCCTGGGTAGCCTTTAGTGTAGCCCTGCGCTCCAGTGCCTaGCAGGAATTGCAGCTGAGCCTGACTGTCTCCTCCGCATCAGTA | + |
Preference number: 1 (lower is better) Translates to: NIPWVAFSVALRSSA*QELQLSLTVSSASV Trigger: TACTGATGCGGAGGAGACAGTCAGGCTCAGCTGCAATTCCTGCCAGGCACTGGAGCGCAGGGCTACACTAAAGGCTACCCAGGGGATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | TCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTGAGGTGGTCAGGATaGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGC | + |
Preference number: 1 (lower is better) Translates to: SRGDLQALPRLRWSG*IRSLSSSSYQCLLR Trigger: GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTGGGCAAGGCCTGGAGATCCCCACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | CCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTGAGGTaGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGT | + |
Preference number: 1 (lower is better) Translates to: PTWSRGDLQALPRLR*SGWIRSLSSSSYQC Trigger: ACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR GCA 90 bp | CAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTaGGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCCAGGT | + |
Preference number: 1 (lower is better) Translates to: QDGSEVSPLHPTNVC*ARTLLSEGCRHAPG Trigger: ACCTGGAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTaGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCC | + |
Preference number: 1 (lower is better) Translates to: PTSGTFSSCLPVEAL*LGFGTDRDLDTAPS Trigger: GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | AATCTCATCTCTGTGGTCAAGGGAGCAGAGTTAAGTCTGGCCAACTaGGGCAGGGGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTAT | + |
Preference number: 1 (lower is better) Translates to: NLISVVKGAELSLAN*GRGWALPCHATFKY Trigger: ATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCCCCTGCCCCAGTTGGCCAGACTTAACTCTGCTCCCTTGACCACAGAGATGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | ATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTaGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGAT | + |
Preference number: 1 (lower is better) Translates to: IRDLFLLSPSRGALA*FWHRQRLGYGTLHD Trigger: ATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR TCA 90 bp | TCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTaGCAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCC | + |
Preference number: 1 (lower is better) Translates to: SSASVVLFWTVNSIH*QWLKGDSVWRSRVP Trigger: GGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 90 bp | GACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTaGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCA | + |
Preference number: 1 (lower is better) Translates to: DLFLLSPSRGALAWF*HRQRLGYGTLHDIS Trigger: TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGTCCCAGCACAGTGTGTaGGTCCAGGCTGCCCACGGT | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWSQHSV*VQAAHG Trigger: ACCGTGGGCAGCCTGGACGCACACACTGTGCTGGGA...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGTCTTGGTGGGTAGCGTaGTCCCTGGAGGTGGGTAGC | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWSWWVA*SLEVGS Trigger: GCTACCCACCTCCAGGGAGCACGCTACCCACCAAGA...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCTCCCAGCACAGTGTGTaGGTCCAGGCTGCCCACGGT | + |
Preference number: 2 (lower is better) Translates to: LHPTNVCCARTLLSEGCRSQHSV*VQAAHG Trigger: ACCGTGGGCAGCCTGGACGCACACACTGTGCTGGGA...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR TCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAGAGGGATAGATGCCTaGGCCTGCTGGTGCCAGCCA | + |
Preference number: 2 (lower is better) Translates to: PWGRGRKPQAAQNLISVVRGIDA*ACWCQP Trigger: TGGCTGGCACCAGCAGGCTCAGGCATCTATCCCTCT...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGAGCCCTGCGCTCCAGTaGCTGGCAGGAATTGCAGCT | + |
Preference number: 2 (lower is better) Translates to: IQVSHPTWSRGDLQALPRSPALQ*LAGIAA Trigger: AGCTGCAATTCCTGCCAGGCACTGGAGCGCAGGGCT...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCTGCGCTCCAGTGCCTaGCAGGAATTGCAGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: LHPTNVCCARTLLSEGCRLRSSA*QELQLS Trigger: GCTCAGCTGCAATTCCTGCCAGGCACTGGAGCGCAG...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGACTGTGCAAGGGCTGTaGTGGGCTCAGCATTGCAAG | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWTVQGL*WAQHCK Trigger: CTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTTGTGTGTGTCCACTGTaGAAGGGCTGTGCTGGGCTC | + |
Preference number: 2 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFCVCPL*KGCAGL Trigger: GAGCCCAGCACAGCCCTTGCACAGTGGACACACACA...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTGTGCAAGGGCTGTGCTaGGCTCAGCATTGCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFVQGLC*AQHCKV Trigger: GACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCAC...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR TCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAAGAGGGATAGATGCCTaGGCCTGCTGGTGCCAGCCA | + |
Preference number: 2 (lower is better) Translates to: GTFSSCLPVEALWLGFGTRGIDA*ACWCQP Trigger: TGGCTGGCACCAGCAGGCTCAGGCATCTATCCCTCT...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGTATCGGTCCCGAATCTaGCAGCTGGTGACCCAGTGC | + |
Preference number: 2 (lower is better) Translates to: VSTVQGLCWAQHCKVLKEYRSRI*QLVTQC Trigger: GCACTGGGTCACCAGCTGGCAGATTCGGGACCGATA...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGACTGTGCAAGGGCTGTaGTGGGCTCAGCATTGCAAG | + |
Preference number: 2 (lower is better) Translates to: IQVSHPTWSRGDLQALPRTVQGL*WAQHCK Trigger: CTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCACTGTGCAAGGGCTGTaGTGGGCTCAGCATTGCAAG | + |
Preference number: 2 (lower is better) Translates to: PWGRGRKPQAAQNLISVVTVQGL*WAQHCK Trigger: CTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGGCCCTCCCCTGCCATaGTACATTCAAGTATCACAC | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWGPPLP*YIQVSH Trigger: GTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGCGTGCTCCCTGGAGGTaGGTAGCGGTCCTCCTCCCG | + |
Preference number: 2 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGRAPWR*VAVLLP Trigger: CGGGAGGAGGACCGCTACCCACCTCCAGGGAGCACG...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR CCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGACCCAGTGCTTCTTGGTaGGTAGCGTGCTCCCTGGAG | + |
Preference number: 2 (lower is better) Translates to: GRGRKPQAAQNLISVVKGPSASW*VACSLE Trigger: CTCCAGGGAGCACGCTACCCACCAAGAAGCACTGGG...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGTTGCCCAGGCTGAGGTaGTCAGGATGGATCAGAAGT | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWLPRLR*SGWIRS Trigger: ACTTCTGATCCATCCTGACCACCTCAGCCTGGGCAA...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR TCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGAGAATCTGCCAGCTGGTaGCCCAGTGCTTCTTGGTGG | + |
Preference number: 2 (lower is better) Translates to: GRGRKPQAAQNLISVVKGESASW*PSASWW Trigger: CCACCAAGAAGCACTGGGTCACCAGCTGGCAGATTC...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTTCTTGGTGGGTAGCGTaGTCCCTGGAGGTGGGTAGC | + |
Preference number: 2 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPSWWVA*SLEVGS Trigger: GCTACCCACCTCCAGGGAGCACGCTACCCACCAAGA...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGCTGAAGAGGGATAGATaGCTGAGCCTGCTGGTGCCA | + |
Preference number: 2 (lower is better) Translates to: VSTVQGLCWAQHCKVLKELKRDR*LSLLVP Trigger: TGGCACCAGCAGGCTCAGGCATCTATCCCTCTTCAG...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCGTGCAAGGGCTGTGCTaGGCTCAGCATTGCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: HGLSLFLRAAFLASSLCSVQGLC*AQHCKV Trigger: GACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCAC...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACACTGAAGAGGGATAGATaGCTGAGCCTGCTGGTGCCA | + |
Preference number: 2 (lower is better) Translates to: GTFSSCLPVEALWLGFGTLKRDR*LSLLVP Trigger: TGGCACCAGCAGGCTCAGGCATCTATCCCTCTTCAG...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCCCAGTGCTTCTTGGTaGGTAGCGTGCTCCCTGGAG | + |
Preference number: 2 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRPSASW*VACSLE Trigger: CTCCAGGGAGCACGCTACCCACCAAGAAGCACTGGG...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR CCA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGGTGCAAGGGCTGTGCTaGGCTCAGCATTGCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTVQGLC*AQHCKV Trigger: GACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCAC...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCGCTTTGGCTTGGTTTTaGCACAGACAGAGACTTGGA | + |
Preference number: 2 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLALAWF*HRQRLG Trigger: TCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGC...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CAA 90 bp | TGGGTAGCCTTTAGTGTAGCCCTGCGCTCCAGTGCCTGGCAGGAATaGCAGCTGAGCCTGACTGTCTCCTCCGCATCAGTAGTTTTATTC | + |
Preference number: 2 (lower is better) Translates to: WVAFSVALRSSAWQE*QLSLTVSSASVVLF Trigger: GAATAAAACTACTGATGCGGAGGAGACAGTCAGGCTCAGCTGCAATTCCTGCCAGGCACTGGAGCGCAGGGCTACACTAAAGGCTACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CAA 90 bp | AGATGCACCCATAAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATaGCTCTTGCGTCTGAGCACGCAGGTCGTAAGAACATCCCCTGGG | + |
Preference number: 2 (lower is better) Translates to: RCTHKAHSGDLLSSS*LLRLSTQVVRTSPG Trigger: CCCAGGGGATGTTCTTACGACCTGCGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTTATGGGTGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR GCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCCTCCCGGATACGCACTaGATGGTACTTGGGCATAAT | + |
Preference number: 2 (lower is better) Translates to: EALWLGFGTDRDLDTAPSLPDTH*MVLGHN Trigger: ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAG...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | AAACTCCATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCAGCTGGTGACCCAGTaGTTCTTGGTGGGTAGCGTG | + |
Preference number: 2 (lower is better) Translates to: KLHPLTMAQGGFSVEEPCQLVTQ*FLVGSV Trigger: CACGCTACCCACCAAGAAGCACTGGGTCACCAGCTG...ACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR GCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTATCGGTCCCGAATCTaGCAGCTGGTGACCCAGTGC | + |
Preference number: 2 (lower is better) Translates to: QAEVVRMDQKSLLFILPMYRSRI*QLVTQC Trigger: GCACTGGGTCACCAGCTGGCAGATTCGGGACCGATA...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR-3UTR GCA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCTCCCGGATACGCACTaGATGGTACTTGGGCATAAT | + |
Preference number: 2 (lower is better) Translates to: HGLSLFLRAAFLASSLCSLPDTH*MVLGHN Trigger: ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAG...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR-3UTR GCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCTGAAGAGGGATAGATaGCTGAGCCTGCTGGTGCCA | + |
Preference number: 2 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRLKRDR*LSLLVP Trigger: TGGCACCAGCAGGCTCAGGCATCTATCCCTCTTCAG...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACCGGATACGCACTGCATaGTACTTGGGCATAATCCGG | + |
Preference number: 2 (lower is better) Translates to: TFSSCLPVEALWLGFGTDRIRTA*YLGIIR Trigger: CCGGATTATGCCCAAGTACCATGCAGTGCGTATCCG...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR CAA 90 bp | CTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATaGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCC | + |
Preference number: 2 (lower is better) Translates to: LLRISSFILDSKLHP*TMAQGGFSVEEPCP Trigger: GGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTACGGATACGCACTGCATaGTACTTGGGCATAATCCGG | + |
Preference number: 2 (lower is better) Translates to: LCSFGLRFLPALSVATILRIRTA*YLGIIR Trigger: CCGGATTATGCCCAAGTACCATGCAGTGCGTATCCG...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGTCAGTAGTTTTATTCTaGACAGTAAACTCCATCCAT | + |
Preference number: 2 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWSVVLF*TVNSIH Trigger: ATGGATGGAGTTTACTGTCCAGAATAAAACTACTGA...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR TCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACAAGCATTGCAAGGTCTTaGAGGAGATTCCAGGGCCCC | + |
Preference number: 2 (lower is better) Translates to: CLLRISSFILDSKLHPLTSIARS*RRFQGP Trigger: GGGGCCCTGGAATCTCCTTCAAGACCTTGCAATGCT...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CCA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGTCAGTAGTTTTATTCTaGACAGTAAACTCCATCCAT | + |
Preference number: 2 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTSVVLF*TVNSIH Trigger: ATGGATGGAGTTTACTGTCCAGAATAAAACTACTGA...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCAGTAGTTTTATTCTaGACAGTAAACTCCATCCAT | + |
Preference number: 2 (lower is better) Translates to: QAEVVRMDQKSLLFILPMSVVLF*TVNSIH Trigger: ATGGATGGAGTTTACTGTCCAGAATAAAACTACTGA...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CAA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGGGGATCTCCAGGCCTaGCCCAGGCTGAGGTGGTCA | + |
Preference number: 3 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWGDLQA*PRLRWS Trigger: TGACCACCTCAGCCTGGGCAAGGCCTGGAGATCCCC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR TCA 72 bp | TCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTaGAGGATGCCGCCATGCTCCAGGTCAGTCCCAGCA | + |
Preference number: 3 (lower is better) Translates to: SYQCLLRQDPAL*RMPPCSRSVPA Trigger: TGCTGGGACTGACCTGGAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CAA 90 bp | GGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGGCACAGACAGAGACTaGGATACGGCACCCTCCATG | + |
Preference number: 3 (lower is better) Translates to: GWALPCHATFKYHTPRGLGTDRD*DTAPSM Trigger: CATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCC...GAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR GCA 72 bp | TGGAGGTGGGTAGCGGTCCTCCTCCCGGATACGCACTaGATGGTACTTGGGCATAATCCGGTAGTAGCGGGT | + |
Preference number: 3 (lower is better) Translates to: WRWVAVLLPDTH*MVLGHNPVVAG Trigger: ACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAGGAGGACCGCTACCCACCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR CCA 72 bp | TGGGTAGCCTTTAGTGTAGCCCTGCGCTCCAGTGCCTaGCAGGAATTGCAGCTGAGCCTGACTGTCTCCTCC | + |
Preference number: 3 (lower is better) Translates to: WVAFSVALRSSA*QELQLSLTVSS Trigger: GGAGGAGACAGTCAGGCTCAGCTGCAATTCCTGCCAGGCACTGGAGCGCAGGGCTACACTAAAGGCTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CAA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGCAGCATTGCAAGGTCTaGAAGGAGATTCCAGGGCCC | + |
Preference number: 3 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWQHCKV*KEIPGP Trigger: GGGCCCTGGAATCTCCTTCAAGACCTTGCAATGCTG...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CAA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGTGCTGGGCTCAGCATaGCAAGGTCTTGAAGGAGAT | + |
Preference number: 3 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWVLGSA*QGLEGD Trigger: ATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCAC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CAA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGGCACAGACAGAGACTaGGATACGGCACCCTCCATG | + |
Preference number: 3 (lower is better) Translates to: SLLFILPMSAAPGPCSLKGTDRD*DTAPSM Trigger: CATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR-3UTR CAA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCGTGACCCAGTGCTTCTaGGTGGGTAGCGTGCTCCCT | + |
Preference number: 3 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRVTQCF*VGSVLP Trigger: AGGGAGCACGCTACCCACCAAGAAGCACTGGGTCAC...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR GCA 72 bp | GTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTaGTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATT | + |
Preference number: 3 (lower is better) Translates to: VGPVCVSTVQGL*WAQHCKVLKEI Trigger: AATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACACACACACAGGGCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 72 bp | CTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTaGTTTTGGCACAGACAGAGACTTGGATACGGCACC | + |
Preference number: 3 (lower is better) Translates to: LFLLSPSRGALA*FWHRQRLGYGT Trigger: GGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CCA 72 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTaGCTTGGTTTTGGCACAGACAGAGACTTGGATACG | + |
Preference number: 3 (lower is better) Translates to: GTFSSCLPVEAL*LGFGTDRDLDT Trigger: CGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR-3UTR CAA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAGTGACCCAGTGCTTCTaGGTGGGTAGCGTGCTCCCT | + |
Preference number: 3 (lower is better) Translates to: AWFWHRQRLGYGTLHDISVTQCF*VGSVLP Trigger: AGGGAGCACGCTACCCACCAAGAAGCACTGGGTCAC...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR-3UTR CAA 90 bp | ATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATGGAGCGCCGGAAGGTTaGTCGGGGAGGGCATCAGTA | + |
Preference number: 3 (lower is better) Translates to: ILVRSPYTKKAQDRGSCYGAPEG*SGRASV Trigger: TACTGATGCCCTCCCCGACAAACCTTCCGGCGCTCC...ATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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3UTR TCA 72 bp | TCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTaGCAATGGCTCAAGGGGGATTCAGTGTGGAGGAGC | + |
Preference number: 3 (lower is better) Translates to: SVVLFWTVNSIH*QWLKGDSVWRS Trigger: GCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCCCCCCTGGATCCAGTTaGCGCCGGCGGCGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLPPGSS*RRRRCG Trigger: GCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGG...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGCGTGCTCCCTGGAGGTaGGTAGCGGTCCTCCTCCCG | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWRAPWR*VAVLLP Trigger: CGGGAGGAGGACCGCTACCCACCTCCAGGGAGCACG...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGACCCCCTGGATCCAGTTaGCGCCGGCGGCGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: GRGRKPQAAQNLISVVKGPPGSS*RRRRCG Trigger: GCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGG...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCACACCGGGTGGGCCGGGGCAGCCCACCATGCGCCGCTaGTCTTCTAGCCCAGACCAC | + |
Preference number: 4 (lower is better) Translates to: NPVVAGRLKEVTPGGPGQPTMRR*SSSPDH Trigger: GTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGG...CTGCCCCGGCCCACCCGGTGTGACTTCTTTAAGCCGACCCGCTACTACCGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR GCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCACCCCCTGGATCCAGTTaGCGCCGGCGGCGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPPPGSS*RRRRCG Trigger: GCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGG...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACCCGCTGGTGCCCAGCTaGCACATGCCGGTCTGCAAG | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHPLVPS*HMPVCK Trigger: CTTGCAGACCGGCATGTGCCAGCTGGGCACCAGCGG...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGCCGCTGGTGCCCAGCTaGCACATGCCGGTCTGCAAG | + |
Preference number: 4 (lower is better) Translates to: VSTVQGLCWAQHCKVLKEPLVPS*HMPVCK Trigger: CTTGCAGACCGGCATGTGCCAGCTGGGCACCAGCGG...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCCGCAGCAGCACGATGTaGTCCGACAGGCTCCCTACT | + |
Preference number: 4 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLRSSTM*SDRLPT Trigger: AGTAGGGAGCCTGTCGGACCACATCGTGCTGCTGCG...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCCGTCCTTGTGGGCCGTaGGGGGACACAGGTACACAG | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRDLDTAPSRPCGP*GDTGTQ Trigger: CTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACG...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGGCCGTGGAAGACAGATaGCTGGCTGCGGGCAAATCG | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVAVEDR*LAAGKS Trigger: CGATTTGCCCGCAGCCAGTCATCTGTCTTCCACGGC...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCGAGTGCGGGCTCGCTTaGAGAAGCCGCACTTCCACA | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRECGLA*RSRTST Trigger: TGTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTC...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR GCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGAGACCAGGACTCTACCTaGAGGGCCCTGGCTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: GRGRKPQAAQNLISVVKGDQDST*RALAGH Trigger: GTGGCCAGCCAGGGCCCTGCAGGTAGAGTCCTGGTC...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGGCGCCCATATGTTGGTaGCGTGGGGCACCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: VSTVQGLCWAQHCKVLKEAPICW*RGAPVT Trigger: TGTGACGGGTGCCCCACGGCACCAACATATGGGCGC...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCTCTTGGTGGGTAGCGTaGTCCCTGGAGGTGGGTAGC | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVSWWVA*SLEVGS Trigger: GCTACCCACCTCCAGGGAGCACGCTACCCACCAAGA...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGTCACAGTCGTCCTTGTaGGCCGTGAGGGGACACAGG | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVSQSSL*AVRGHR Trigger: CCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGA...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | AGGTGGGTAGCGGTCCTCCTCCCGGATACGCACTGCATGGTACTTGGGCATAATCCCACCATGCGCCGCTaGTCTTCTAGCCCAGACCAC | + |
Preference number: 4 (lower is better) Translates to: RWVAVLLPDTHCMVLGHNPTMRR*SSSPDH Trigger: GTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGG...ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAGGAGGACCGCTACCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGCAAAGGCAGAGCGGCTaGGGCCGTGAAGCAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKQRQSG*GREAGG Trigger: CCCTCCTGCTTCACGGCCCCAGCCGCTCTGCCTTTG...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGCGCAGCAGCACGATGTaGTCCGACAGGCTCCCTACT | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVRSSTM*SDRLPT Trigger: AGTAGGGAGCCTGTCGGACCACATCGTGCTGCTGCG...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGCCAACACAGCTGGCCTaGCCACCAAGGTCCTATGGA | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWPTQLA*PPRSYG Trigger: TCCATAGGACCTTGGTGGCCAGGCCAGCTGTGTTGG...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGCGGGTGGGTCAGCCTaGCTTTGCAAGCCTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHAGGSA*LCKPPS Trigger: GGAGGGAGGCTTGCAAAGCCAGGCTGACCCACCCGC...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
CDS-3UTR TCA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCGTCCTTGTGGGCCGTaGGGGGACACAGGTACACAG | + |
Preference number: 4 (lower is better) Translates to: HGLSLFLRAAFLASSLCSRPCGP*GDTGTQ Trigger: CTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACG...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCGTGTGTAAGCCAGGGTaGTGTTCCGCCTGTAGTTGG | + |
Preference number: 4 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLVCKPG*CSACSW Trigger: CCAACTACAGGCGGAACATCACCCTGGCTTACACAC...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTGCCGTGGAAGACAGATaGCTGGCTGCGGGCAAATCG | + |
Preference number: 4 (lower is better) Translates to: PTSGTFSSCLPVEALWLGAVEDR*LAAGKS Trigger: CGATTTGCCCGCAGCCAGTCATCTGTCTTCCACGGC...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGCTCGACGTGGACAGCTaGAGAAGTACTGGGAGGTCC | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVLDVDS*RSTGRS Trigger: GGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAG...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCCTCGACGTGGACAGCTaGAGAAGTACTGGGAGGTCC | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVLDVDS*RSTGRS Trigger: GGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAG...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGACCAGGACTCTACCTaGAGGGCCCTGGCTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPDQDST*RALAGH Trigger: GTGGCCAGCCAGGGCCCTGCAGGTAGAGTCCTGGTC...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACAGCACTTGCCCACCATaGGCCGCTGGTCTTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHSTCPP*AAGLLA Trigger: GGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCT...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCAGCACTTGCCCACCATaGGCCGCTGGTCTTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRDLDTAPSSTCPP*AAGLLA Trigger: GGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCT...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTTCGTTGTGGTATGTCTaGCAGTCATCGCCGGGGTCG | + |
Preference number: 4 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFSLWYV*QSSPGS Trigger: CGACCCCGGCGATGACTGGCAGACATACCACAACGA...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGCGCCCATATGTTGGTaGCGTGGGGCACCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: GTFSSCLPVEALWLGFGTAPICW*RGAPVT Trigger: TGTGACGGGTGCCCCACGGCACCAACATATGGGCGC...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGCGCCCATATGTTGGTaGCGTGGGGCACCCGTCACA | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHAPICW*RGAPVT Trigger: TGTGACGGGTGCCCCACGGCACCAACATATGGGCGC...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGAAAGCGCCCACCTGCGTaGCCTTCAGCACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: GRGRKPQAAQNLISVVKGKRPPA*PSAPAS Trigger: GGAAGCAGGTGCTGAAGGGCACGCAGGTGGGCGCTT...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCGACCTAGAACCAGTGTaGCCAAGGCTGCCAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRDLEPV*PRLPAH Trigger: ATGGGCTGGCAGCCTTGGGCACACTGGTTCTAGGTC...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | AATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCACACCGGGTGGGCCGGGGCAGGCTGTTCCACACCCGTaGTTTCACGGTCACATTGGT | + |
Preference number: 4 (lower is better) Translates to: NPVVAGRLKEVTPGGPGQAVPHP*FHGHIG Trigger: ACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGC...CTGCCCCGGCCCACCCGGTGTGACTTCTTTAAGCCGACCCGCTACTACCGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGCCCACCATGCGCCGCTaGTCTTCTAGCCCAGACCAC | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKPTMRR*SSSPDH Trigger: GTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGG...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGACAGCGCCCATATGTTaGTGCCGTGGGGCACCCGTC | + |
Preference number: 4 (lower is better) Translates to: KSLLFILPMSAAPGPCSLTAPIC*CRGAPV Trigger: GACGGGTGCCCCACGGCACCAACATATGGGCGCTGT...CAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGACAGCGCCCATATGTTaGTGCCGTGGGGCACCCGTC | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKTAPIC*CRGAPV Trigger: GACGGGTGCCCCACGGCACCAACATATGGGCGCTGT...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTGCCCAAGCCCTCAAATaGGGCTCCCACAGCGATGTC | + |
Preference number: 4 (lower is better) Translates to: PTSGTFSSCLPVEALWLGAQALK*GSHSDV Trigger: GACATCGCTGTGGGAGCCCCATTTGAGGGCTTGGGC...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGGGGAGTAGCCGAAGGTaGCCAAGCCTGGCAGTCCGA | + |
Preference number: 4 (lower is better) Translates to: KSLLFILPMSAAPGPCSLGSSRR*PSLAVR Trigger: TCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCC...CAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACACAGGCGGGGAACTCTaGTCTCCCCCTGGATCCAGT | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHTGGEL*SPPGSS Trigger: ACTGGATCCAGGGGGAGACCAGAGTTCCCCGCCTGT...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTCGCCCGCCTGGTTCATaGAGACATAGACGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPRPPGS*RHRRHP Trigger: GGGGTGCCGTCTATGTCTTCATGAACCAGGCGGGCG...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCAGCCTTTCTGTCTCTaGCGGCTGGCTCTTCATCTC | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRQPFCL*RLALHL Trigger: GAGATGAAGAGCCAGCCGTCAGAGACAGAAAGGCTG...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR GCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACACACGCACATAGCACTTaGCCACCATGCGCCGCTGGT | + |
Preference number: 4 (lower is better) Translates to: GTFSSCLPVEALWLGFGTHAHST*PPCAAG Trigger: ACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTG...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGTCGTTGTGGTATGTCTaGCAGTCATCGCCGGGGTCG | + |
Preference number: 4 (lower is better) Translates to: VSTVQGLCWAQHCKVLKESLWYV*QSSPGS Trigger: CGACCCCGGCGATGACTGGCAGACATACCACAACGA...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACAAGCGCCCACCTGCGTaGCCTTCAGCACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDKRPPA*PSAPAS Trigger: GGAAGCAGGTGCTGAAGGGCACGCAGGTGGGCGCTT...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCCAGGGCAATGGCACTaGCAAAATAAGCGCCCACCT | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRPGQWH*QNKRPP Trigger: AGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTTGCTGTACTGGAGCCTaGTTAGAGGCTGCAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFCCTGA*LEAAAA Trigger: AGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCA...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCGGGTCAGCCTGGCTTTaGAAGCCTCCCTCCAGTCAG | + |
Preference number: 4 (lower is better) Translates to: HGLSLFLRAAFLASSLCSGSAWL*KPPSSQ Trigger: CTGACTGGAGGGAGGCTTGCAAAGCCAGGCTGACCC...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
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CDS-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGCAGCACCAGTCCGGTTaGTATAGTCATCACCCACAG | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWQHQSG*YSHHPQ Trigger: CTGTGGGTGATGACTATACCAACCGGACTGGTGCTG...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCCAGACCACAGCACCTTaGTGTACCGATGGGCACAGA | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVQTTAP*CTDGHR Trigger: TCTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTG...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCGGTCTGCCAGGGCAATaGCACTGCCAAAATAAGCGC | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVGLPGQ*HCQNKR Trigger: GCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACC...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAAGGGTCCAACACAGCTaGCCTGGCCACCAAGGTCCT | + |
Preference number: 4 (lower is better) Translates to: GTFSSCLPVEALWLGFGTRVQHS*PGHQGP Trigger: AGGACCTTGGTGGCCAGGCCAGCTGTGTTGGACCCT...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCGTGTCTCTGCTGTACTaGAGCCTGCTTAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVVSLLY*SLLRGC Trigger: GCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACAC...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTGTGTCTCTGCTGTACTaGAGCCTGCTTAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFVSLLY*SLLRGC Trigger: GCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACAC...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCCTCCGCAGTTTTCATaGCAGCCTCACCCATCACTG | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRPPQFS*QPHPSL Trigger: CAGTGATGGGTGAGGCTGCCATGAAAACTGCGGAGG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGACAGGCGGGGAACTCTaGTCTCCCCCTGGATCCAGT | + |
Preference number: 4 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQTGGEL*SPPGSS Trigger: ACTGGATCCAGGGGGAGACCAGAGTTCCCCGCCTGT...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTGCAGGTCTCCACCTaGCTCTTGCTTCAGCAAGAA | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRLQVST*LLLQQE Trigger: TTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | TTGCAAGGTCTTGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTGCACTGAAGCGCCCGCCTGGTTCATaGAGACATAGACGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: LQGLEGDSRAPENMPALKRPPGS*RHRRHP Trigger: GGGGTGCCGTCTATGTCTTCATGAACCAGGCGGGCG...CTTCAGTGCAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGGGAATCCATCCTGGTTaGTGTCACCGATGCTGGCTA | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRGIHPG*CHRCWL Trigger: TAGCCAGCATCGGTGACATCAACCAGGATGGATTCC...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGGGAATCCATCCTGGTTaGTGTCACCGATGCTGGCTA | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVGIHPG*CHRCWL Trigger: TAGCCAGCATCGGTGACATCAACCAGGATGGATTCC...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTGTGTGTAAGCCAGGGTaGTGTTCCGCCTGTAGTTGG | + |
Preference number: 4 (lower is better) Translates to: PTSGTFSSCLPVEALWLGVCKPG*CSACSW Trigger: CCAACTACAGGCGGAACATCACCCTGGCTTACACAC...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTAAGTGGACCTCAGTGTaGTTCTCCATAGCCTGTGCC | + |
Preference number: 4 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFKWTSV*FSIACA Trigger: GGCACAGGCTATGGAGAATCACACTGAGGTCCACTT...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCTCCTCTGGTTCCGTTTaGAGGGGTTTCCTAGCTCAC | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVSSGSV*RGFLAH Trigger: GTGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGA...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCCCCAGCCATCTACCCTaGCTCTGTCAAAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLPSHLP*LCQSLC Trigger: ACAAAGACTTTGACAGAGTCAGGGTAGATGGCTGGG...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCTCCTCCACCAGCTCTaGGTCAATGTCCACAGAGAA | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRLLHQL*VNVHRE Trigger: TTCTCTGTGGACATTGACTCAGAGCTGGTGGAGGAG...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTAGCACTTGCCCACCATaGGCCGCTGGTCTTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPSTCPP*AAGLLA Trigger: GGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCT...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCACACGCACATAGCACTTaGCCACCATGCGCCGCTGGT | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPHAHST*PPCAAG Trigger: ACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTG...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | AAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGGTGCCCTTCAGCACCTaGTTCCTCTGCAGGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: KSLLFILPMSAAPGPCSLVPFST*FLCRSP Trigger: TGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGCAC...CAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGTGCCCTTCAGCACCTaGTTCCTCTGCAGGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHVPFST*FLCRSP Trigger: TGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGCAC...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACCCAGGGCAATGGCACTaGCAAAATAAGCGCCCACCT | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHPGQWH*QNKRPP Trigger: AGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGG...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGGTAGATGTAGACTTTaGCCAAGCCCTCAAATGGGG | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWGRCRL*PSPQMG Trigger: CCCCATTTGAGGGCTTGGGCAAAGTCTACATCTACC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCTCGCATCTGCAGGTTaGTGTCGCACTTGTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRLASAG*CRTCCL Trigger: CAGACAACAAGTGCGACAGCAACCTGCAGATGCGAG...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGTGCTGTACTGGAGCCTaGTTAGAGGCTGCAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: VSTVQGLCWAQHCKVLKECCTGA*LEAAAA Trigger: AGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCA...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCCCTCACCCATCACTGTaGCACCAAAGAAGCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVPHPSL*HQRSSA Trigger: TGCAGAGCTTCTTTGGTGGCACAGTGATGGGTGAGG...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCGCTGTTCCACACCCGTaGTTTCACGGTCACATTGGT | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRAVPHP*FHGHIG Trigger: ACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGC...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | AAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGCAGCTGGTGACCCAGTaGTTCTTGGTGGGTAGCGTG | + |
Preference number: 4 (lower is better) Translates to: KSLLFILPMSAAPGPCSLQLVTQ*FLVGSV Trigger: CACGCTACCCACCAAGAAGCACTGGGTCACCAGCTG...CAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACCAGACCACAGCACCTTaGTGTACCGATGGGCACAGA | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHQTTAP*CTDGHR Trigger: TCTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTG...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCACAGCGCCCATATGTTaGTGCCGTGGGGCACCCGTC | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRTAPIC*CRGAPV Trigger: GACGGGTGCCCCACGGCACCAACATATGGGCGCTGT...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | AGGTGGGTAGCGGTCCTCCTCCCGGATACGCACTGCATGGTACTTGGGCATAATGGTCTGCCAGGGCAATaGCACTGCCAAAATAAGCGC | + |
Preference number: 4 (lower is better) Translates to: RWVAVLLPDTHCMVLGHNGLPGQ*HCQNKR Trigger: GCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACC...ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAGGAGGACCGCTACCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR CCA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGCAAAGGCAGAGCGGCTaGGGCCGTGAAGCAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGQRQSG*GREAGG Trigger: CCCTCCTGCTTCACGGCCCCAGCCGCTCTGCCTTTG...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCCCACAGCGATGTCCTaGAATCCATCCTGGTTGATG | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRPTAMS*NPSWLM Trigger: CATCAACCAGGATGGATTCCAGGACATCGCTGTGGG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGGCCCAAGCCCTCAAATaGGGCTCCCACAGCGATGTC | + |
Preference number: 4 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTAQALK*GSHSDV Trigger: GACATCGCTGTGGGAGCCCCATTTGAGGGCTTGGGC...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGAAGGTGGCCAAGCCTaGCAGTCCGAGTTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKEGGQA*QSEFLS Trigger: GGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGAAGGTGGCCAAGCCTaGCAGTCCGAGTTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQEGGQA*QSEFLS Trigger: GGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTC...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AAACTCCATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTGGGAGTAGCCGAAGGTaGCCAAGCCTGGCAGTCCGA | + |
Preference number: 4 (lower is better) Translates to: KLHPLTMAQGGFSVEEPCGSSRR*PSLAVR Trigger: TCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCC...ACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACCCAACACAGCTGGCCTaGCCACCAAGGTCCTATGGA | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHPTQLA*PPRSYG Trigger: TCCATAGGACCTTGGTGGCCAGGCCAGCTGTGTTGG...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTAGGGTCCAACACAGCTaGCCTGGCCACCAAGGTCCT | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPRVQHS*PGHQGP Trigger: AGGACCTTGGTGGCCAGGCCAGCTGTGTTGGACCCT...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: GWALPCHATFKYHTPRGLSSSIL*FRLKGF Trigger: AAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...GAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTCCTCCGCAGTTTTCATaGCAGCCTCACCCATCACTG | + |
Preference number: 4 (lower is better) Translates to: PTSGTFSSCLPVEALWLGPPQFS*QPHPSL Trigger: CAGTGATGGGTGAGGCTGCCATGAAAACTGCGGAGG...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATCAGGGACCTTTTCAGGAACCATTGCTATaGATGGTGATCTCCGTGGGG | + |
Preference number: 4 (lower is better) Translates to: GSRGIQCGGAVSPHQGPFQEPLL*MVISVG Trigger: CCCCACGGAGATCACCATCCATAGCAATGGTTCCTG...AAAAGGTCCCTGATGTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGTCTGTCTCTGACGGCTaGCTCTTCATCTCAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRSVSDG*LFISAF Trigger: GAAGGCTGAGATGAAGAGCCAGCCGTCAGAGACAGA...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR CCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTACCCCGGCCAGAAGGCTaGAAAAGGAAGGCGGGTGGG | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILPRPEG*KRKAGG Trigger: CCCACCCGCCTTCCTTTTCCAGCCTTCTGGCCGGGG...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
CDS-3UTR CCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCACCCAGTGCTTCTTGGTaGGTAGCGTGCTCCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPPSASW*VACSLE Trigger: CTCCAGGGAGCACGCTACCCACCAAGAAGCACTGGG...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
||
3UTR CAA 72 bp | GTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTaGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTG | + |
Preference number: 4 (lower is better) Translates to: VQGLCWAQHCKV*KEIPGPQKTCL Trigger: CAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTACGTCCTTGTGGGCCGTaGGGGGACACAGGTACACAG | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILRPCGP*GDTGTQ Trigger: CTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACG...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAATACGGTGTTCTGGGTaGAGCCGCCGCTGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILIRCSG*SRRWCP Trigger: TGGGCACCAGCGGCGGCTTCACCCAGAACACCGTAT...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGCTCGACGTGGACAGCTaGAGAAGTACTGGGAGGTCC | + |
Preference number: 4 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTLDVDS*RSTGRS Trigger: GGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAG...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTTTGTAGTCCTCAATaGAGGTGCTGTTCCACACCC | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRLCSPQ*RCCSTP Trigger: GGGTGTGGAACAGCACCTTCATTGAGGACTACAAAG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCGAGTGCGGGCTCGCTTaGAGAAGCCGCACTTCCACA | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRECGLA*RSRTST Trigger: TGTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTC...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR TCA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGCAGCCTTTCTGTCTCTaGCGGCTGGCTCTTCATCTC | + |
Preference number: 4 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQQPFCL*RLALHL Trigger: GAGATGAAGAGCCAGCCGTCAGAGACAGAAAGGCTG...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR TCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACGAATCTGCCAGCTGGTaGCCCAGTGCTTCTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDESASW*PSASWW Trigger: CCACCAAGAAGCACTGGGTCACCAGCTGGCAGATTC...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCTGTTGTCGCTCAGTCTaGCGATGGAGGGCGACCGAG | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRCCRSV*RWRATE Trigger: CTCGGTCGCCCTCCATCGGCAGACTGAGCGACAACA...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGCGAGCTGTAGGTCATTaGCACGCACATAGCACTTGC | + |
Preference number: 4 (lower is better) Translates to: VSTVQGLCWAQHCKVLKERAVGH*HAHSTC Trigger: GCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCG...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCTCTCCACCTGACTCTTaGTTCAGCAAGAAGACAGCG | + |
Preference number: 4 (lower is better) Translates to: PWGRGRKPQAAQNLISVVSPPDS*FSKKTA Trigger: CGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGA...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCCCTCACCCATCACTGTaGCACCAAAGAAGCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRDLDTAPSPHPSL*HQRSSA Trigger: TGCAGAGCTTCTTTGGTGGCACAGTGATGGGTGAGG...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | ATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGCCTTGCCCAGGCTCCCGGATACGCACTaGATGGTACTTGGGCATAAT | + |
Preference number: 4 (lower is better) Translates to: IQVSHPTWSRGDLQALPRLPDTH*MVLGHN Trigger: ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAG...CCTGGGCAAGGCCTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACCAGCACCAGTCCGGTTaGTATAGTCATCACCCACAG | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHQHQSG*YSHHPQ Trigger: CTGTGGGTGATGACTATACCAACCGGACTGGTGCTG...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCACAAAGGCAGAGCGGCTaGGGCCGTGAAGCAGGAGGG | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISQRQSG*GREAGG Trigger: CCCTCCTGCTTCACGGCCCCAGCCGCTCTGCCTTTG...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGGCCACCAAGGTCCTATaGAGGATATTGATGACAGGC | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVATKVL*RILMTG Trigger: GCCTGTCATCAATATCCTCCATAGGACCTTGGTGGC...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GAGCAGGCCATTAGCAGTAGGCCCTGTGTGTGTGTCCACTGTGCAAGGGCTGTGAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: EQAISSRPCVCVHCARAVSSSIL*FRLKGF Trigger: AAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...CACAGCCCTTGCACAGTGGACACACACACAGGGCCTACTGCTAATGGCCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGCCTCCGCAGTTTTCATaGCAGCCTCACCCATCACTG | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKPPQFS*QPHPSL Trigger: CAGTGATGGGTGAGGCTGCCATGAAAACTGCGGAGG...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CAA 72 bp | GCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTaGCGTCTGAGCACGCAGGTCGTAAGAACATCCCCT | + |
Preference number: 4 (lower is better) Translates to: AHSGDLLSSSLL*RLSTQVVRTSP Trigger: AGGGGATGTTCTTACGACCTGCGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCGTTTCCTTGCTCCTCTaGGCCCCTGTAGCTATATTC | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRDLDTAPSVSLLL*APVAIF Trigger: GAATATAGCTACAGGGGCTCAGAGGAGCAAGGAAAC...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCTGCAGGTCTCCACCTaGCTCTTGCTTCAGCAAGAA | + |
Preference number: 4 (lower is better) Translates to: HGLSLFLRAAFLASSLCSLQVST*LLLQQE Trigger: TTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAG...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGGAATCCATCCTGGTTaGTGTCACCGATGCTGGCTA | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKGIHPG*CHRCWL Trigger: TAGCCAGCATCGGTGACATCAACCAGGATGGATTCC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACAAACACAGCTCCACCTaGACACAGGAGGTAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHKHSST*TQEVAV Trigger: TACAGCTACCTCCTGTGTTCAGGTGGAGCTGTGTTT...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCGTTGTGGTATGTCTaGCAGTCATCGCCGGGGTCG | + |
Preference number: 4 (lower is better) Translates to: QAEVVRMDQKSLLFILPMSLWYV*QSSPGS Trigger: CGACCCCGGCGATGACTGGCAGACATACCACAACGA...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACTCTCCACCTGACTCTTaGTTCAGCAAGAAGACAGCG | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHSPPDS*FSKKTA Trigger: CGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGA...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACCCAGGGCAATGGCACTaGCAAAATAAGCGCCCACCT | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDPGQWH*QNKRPP Trigger: AGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGG...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACGGTAGATGTAGACTTTaGCCAAGCCCTCAAATGGGG | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHGRCRL*PSPQMG Trigger: CCCCATTTGAGGGCTTGGGCAAAGTCTACATCTACC...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTGGTAGATGTAGACTTTaGCCAAGCCCTCAAATGGGG | + |
Preference number: 4 (lower is better) Translates to: PTSGTFSSCLPVEALWLGGRCRL*PSPQMG Trigger: CCCCATTTGAGGGCTTGGGCAAAGTCTACATCTACC...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACATTCTCCATAGCCTGTaGCTGGTTGAGGACTGGGTA | + |
Preference number: 4 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHILHSL*LVEDWV Trigger: TACCCAGTCCTCAACCAGGCACAGGCTATGGAGAAT...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGCTCGCATCTGCAGGTTaGTGTCGCACTTGTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: VSLCSFGLRFLPALSVATLASAG*CRTCCL Trigger: CAGACAACAAGTGCGACAGCAACCTGCAGATGCGAG...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGCCTCACCCATCACTGTaGCACCAAAGAAGCTCTGCA | + |
Preference number: 4 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQPHPSL*HQRSSA Trigger: TGCAGAGCTTCTTTGGTGGCACAGTGATGGGTGAGG...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGCTGTTCCACACCCGTaGTTTCACGGTCACATTGGT | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHAVPHP*FHGHIG Trigger: ACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGC...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCTTCATCTCAGCCTTCTaGCTCTTAGCTTCATACAGG | + |
Preference number: 4 (lower is better) Translates to: GWALPCHATFKYHTPRGLFISAF*LLASYR Trigger: CCTGTATGAAGCTAAGAGGCAGAAGGCTGAGATGAA...GAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR GCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCTATCGGTCCCGAATCTaGCAGCTGGTGACCCAGTGC | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRYRSRI*QLVTQC Trigger: GCACTGGGTCACCAGCTGGCAGATTCGGGACCGATA...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGTTACACATCTCGTTGTaGTATGTCTGCCAGTCATCG | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWLHISL*YVCQSS Trigger: CGATGACTGGCAGACATACCACAACGAGATGTGTAA...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGACCGAGTTTCTCTCCATaGATTATCTGCTGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: GRGRKPQAAQNLISVVKGPSFSP*IICWGC Trigger: GCAGCCCCAGCAGATAATCCATGGAGAGAAACTCGG...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGGAAGGTGGCCAAGCCTaGCAGTCCGAGTTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: QAEVVRMDQKSLLFILPMEGGQA*QSEFLS Trigger: GGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTC...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGCGCAGCAGCACGATGTaGTCCGACAGGCTCCCTACT | + |
Preference number: 4 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGRSSTM*SDRLPT Trigger: AGTAGGGAGCCTGTCGGACCACATCGTGCTGCTGCG...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGAGGGTCCAACACAGCTaGCCTGGCCACCAAGGTCCT | + |
Preference number: 4 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGRVQHS*PGHQGP Trigger: AGGACCTTGGTGGCCAGGCCAGCTGTGTTGGACCCT...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | AAACTCCATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTTGTTCCGCCTGTAGTTaGGGTTCCCAGCGCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: KLHPLTMAQGGFSVEEPCCSACS*GSQRSG Trigger: ACCAGAGCGCTGGGAACCCCAACTACAGGCGGAACA...ACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCAGTAACTCCAGTGTCTaGCAATGTGTCTCTGGCATG | + |
Preference number: 4 (lower is better) Translates to: LHPTNVCCARTLLSEGCRSNSSV*QCVSGM Trigger: CATGCCAGAGACACATTGCCAGACACTGGAGTTACT...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGGTCGCACTTGTTGTCTaGCCCGCACTCTTTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: VSLCSFGLRFLPALSVATVALVV*PALFLE Trigger: TTCCAGAAAGAGTGCGGGCCAGACAACAAGTGCGAC...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACCAGGAACCATTGCTATaGATGGTGATCTCCGTGGGG | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHQEPLL*MVISVG Trigger: CCCCACGGAGATCACCATCCATAGCAATGGTTCCTG...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACCGGATACGCACTGCATaGTACTTGGGCATAATCCGG | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHRIRTA*YLGIIR Trigger: CCGGATTATGCCCAAGTACCATGCAGTGCGTATCCG...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGAAACACAGCTCCACCTaGACACAGGAGGTAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: VSLCSFGLRFLPALSVATKHSST*TQEVAV Trigger: TACAGCTACCTCCTGTGTTCAGGTGGAGCTGTGTTT...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGACTTTGTAGTCCTCAATaGAGGTGCTGTTCCACACCC | + |
Preference number: 4 (lower is better) Translates to: GRGRKPQAAQNLISVVKGLCSPQ*RCCSTP Trigger: GGGTGTGGAACAGCACCTTCATTGAGGACTACAAAG...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACACCCAGCCATCTACCCTaGCTCTGTCAAAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: GTFSSCLPVEALWLGFGTPSHLP*LCQSLC Trigger: ACAAAGACTTTGACAGAGTCAGGGTAGATGGCTGGG...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTCTCCTCCACCAGCTCTaGGTCAATGTCCACAGAGAA | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPLLHQL*VNVHRE Trigger: TTCTCTGTGGACATTGACTCAGAGCTGGTGGAGGAG...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACATCATTGTTCAGGTCTaGCAGGGCAATGGCACTGCC | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDIIVQV*QGNGTA Trigger: GGCAGTGCCATTGCCCTGGCAGACCTGAACAATGAT...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGATTCTCCATAGCCTGTaGCTGGTTGAGGACTGGGTA | + |
Preference number: 4 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQILHSL*LVEDWV Trigger: TACCCAGTCCTCAACCAGGCACAGGCTATGGAGAAT...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCACTCGCATCTGCAGGTTaGTGTCGCACTTGTTGTCTG | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPLASAG*CRTCCL Trigger: CAGACAACAAGTGCGACAGCAACCTGCAGATGCGAG...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGGACCTAGAACCAGTGTaGCCAAGGCTGCCAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGDLEPV*PRLPAH Trigger: ATGGGCTGGCAGCCTTGGGCACACTGGTTCTAGGTC...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAGACCTAGAACCAGTGTaGCCAAGGCTGCCAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILDLEPV*PRLPAH Trigger: ATGGGCTGGCAGCCTTGGGCACACTGGTTCTAGGTC...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACTCCCTCCAGTCAGCCTaGAAATCCACACTCTCTGAA | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHSLQSA*KSTLSE Trigger: TTCAGAGAGTGTGGATTTGCAGGCTGACTGGAGGGA...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
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CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCATCACAGTCGTCCTTGTaGGCCGTGAGGGGACACAGG | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISSQSSL*AVRGHR Trigger: CCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGA...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CACTGCATGGTACTTGGGCATAATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCCAGACCACAGCACCTTaGTGTACCGATGGGCACAGA | + |
Preference number: 4 (lower is better) Translates to: HCMVLGHNPVVAGRLKEVQTTAP*CTDGHR Trigger: TCTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTG...GACTTCTTTAAGCCGACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR CCA 90 bp | TTGCAAGGTCTTGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTGCACTGAAGGGTCTGCCAGGGCAATaGCACTGCCAAAATAAGCGC | + |
Preference number: 4 (lower is better) Translates to: LQGLEGDSRAPENMPALKGLPGQ*HCQNKR Trigger: GCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACC...CTTCAGTGCAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCACCCACAGCGATGTCCTaGAATCCATCCTGGTTGATG | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPPTAMS*NPSWLM Trigger: CATCAACCAGGATGGATTCCAGGACATCGCTGTGGG...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAGCCCAAGCCCTCAAATaGGGCTCCCACAGCGATGTC | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISAQALK*GSHSDV Trigger: GACATCGCTGTGGGAGCCCCATTTGAGGGCTTGGGC...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACCCGAGTTTCTCTCCATaGATTATCTGCTGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDPSFSP*IICWGC Trigger: GCAGCCCCAGCAGATAATCCATGGAGAGAAACTCGG...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGCCACCAAGGTCCTATaGAGGATATTGATGACAGGC | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKATKVL*RILMTG Trigger: GCCTGTCATCAATATCCTCCATAGGACCTTGGTGGC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACAGCAGCTCCATCCTCTaGTTCCGTTTGAAGGGGTTT | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHSSSIL*FRLKGF Trigger: AAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCT...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGCCCACTGGGCTCACCTaGAATTCATATTTCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKPTGLT*NSYFRG Trigger: TCCCCTGAAATATGAATTCCAGGTGAGCCCAGTGGG...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTCAGGAACCATTGCTATaGATGGTGATCTCCGTGGGG | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPQEPLL*MVISVG Trigger: CCCCACGGAGATCACCATCCATAGCAATGGTTCCTG...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TTGCAAGGTCTTGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTGCACTGAAGGAAAAGGAAGGCGGGTaGGTCAGCCTGGCTTTGCAA | + |
Preference number: 4 (lower is better) Translates to: LQGLEGDSRAPENMPALKEKEGG*VSLALQ Trigger: TTGCAAAGCCAGGCTGACCCACCCGCCTTCCTTTTC...CTTCAGTGCAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
3UTR CAA 72 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTaGGATACGGCACCCTCCATGATATATCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRD*DTAPSMIYQSR Trigger: CCTGCTCTGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR CAA 72 bp | AGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTaGGCTTGGTTTTGGCACAGACAGAGACTTGGATAC | + |
Preference number: 4 (lower is better) Translates to: RDLFLLSPSRGA*AWFWHRQRLGY Trigger: GTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
3UTR CAA 72 bp | CCCACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTaGCCAGCTCTCTCTGTAGCCACGATTTTAGAGATG | + |
Preference number: 4 (lower is better) Translates to: PTVSLCSFGLRF*PALSVATILEM Trigger: CATCTCTAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGTTTCCTTGCTCCTCTaGGCCCCTGTAGCTATATTC | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPVSLLL*APVAIF Trigger: GAATATAGCTACAGGGGCTCAGAGGAGCAAGGAAAC...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | TTGCAAGGTCTTGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTGCACTGAAGTCCTCTGGTTCCGTTTaGAGGGGTTTCCTAGCTCAC | + |
Preference number: 4 (lower is better) Translates to: LQGLEGDSRAPENMPALKSSGSV*RGFLAH Trigger: GTGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGA...CTTCAGTGCAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCGAGCTGTAGGTCATTaGCACGCACATAGCACTTGC | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRRAVGH*HAHSTC Trigger: GCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCG...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACACCGCTGGTGCCCAGCTaGCACATGCCGGTCTGCAAG | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTPLVPS*HMPVCK Trigger: CTTGCAGACCGGCATGTGCCAGCTGGGCACCAGCGG...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACTCCTGGAATCCATCCTaGTTGATGTCACCGATGCTG | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDSWNPS*LMSPML Trigger: CAGCATCGGTGACATCAACCAGGATGGATTCCAGGA...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCATCCTGGAATCCATCCTaGTTGATGTCACCGATGCTG | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPSWNPS*LMSPML Trigger: CAGCATCGGTGACATCAACCAGGATGGATTCCAGGA...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CACTGCATGGTACTTGGGCATAATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCCCGAGTTTCTCTCCATaGATTATCTGCTGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: HCMVLGHNPVVAGRLKEVPSFSP*IICWGC Trigger: GCAGCCCCAGCAGATAATCCATGGAGAGAAACTCGG...GACTTCTTTAAGCCGACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS-3UTR CCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCTGGCAATGTGTCTCTaGCATGGAGAAGAAGCCGTG | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRLAMCL*HGEEAV Trigger: CACGGCTTCTTCTCCATGCCAGAGACACATTGCCAG...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGCTGGCAATGTGTCTCTaGCATGGAGAAGAAGCCGTG | + |
Preference number: 4 (lower is better) Translates to: QAEVVRMDQKSLLFILPMLAMCL*HGEEAV Trigger: CACGGCTTCTTCTCCATGCCAGAGACACATTGCCAG...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACCCCACTGGGCTCACCTaGAATTCATATTTCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDPTGLT*NSYFRG Trigger: TCCCCTGAAATATGAATTCCAGGTGAGCCCAGTGGG...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCTCTGTCTCTGACGGCTaGCTCTTCATCTCAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRSVSDG*LFISAF Trigger: GAAGGCTGAGATGAAGAGCCAGCCGTCAGAGACAGA...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR TCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACAATACGGTGTTCTGGGTaGAGCCGCCGCTGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTIRCSG*SRRWCP Trigger: TGGGCACCAGCGGCGGCTTCACCCAGAACACCGTAT...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGGTTTCCTTGCTCCTCTaGGCCCCTGTAGCTATATTC | + |
Preference number: 4 (lower is better) Translates to: QAEVVRMDQKSLLFILPMVSLLL*APVAIF Trigger: GAATATAGCTACAGGGGCTCAGAGGAGCAAGGAAAC...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTACTGCAGGTCTCCACCTaGCTCTTGCTTCAGCAAGAA | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILLQVST*LLLQQE Trigger: TTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAG...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACACGCCCGCCTGGTTCATaGAGACATAGACGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTRPPGS*RHRRHP Trigger: GGGGTGCCGTCTATGTCTTCATGAACCAGGCGGGCG...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | AAACTCCATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTAAACACAGCTCCACCTaGACACAGGAGGTAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: KLHPLTMAQGGFSVEEPCKHSST*TQEVAV Trigger: TACAGCTACCTCCTGTGTTCAGGTGGAGCTGTGTTT...ACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAGTGTGTAAGCCAGGGTaGTGTTCCGCCTGTAGTTGG | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISVCKPG*CSACSW Trigger: CCAACTACAGGCGGAACATCACCCTGGCTTACACAC...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCGTGAATTGGTCACATTaGTGCTCAAAAACAGTTTCT | + |
Preference number: 4 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLVNWSH*CSKTVS Trigger: AGAAACTGTTTTTGAGCATCAATGTGACCAATTCAC...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGTGAATTGGTCACATTaGTGCTCAAAAACAGTTTCT | + |
Preference number: 4 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWVNWSH*CSKTVS Trigger: AGAAACTGTTTTTGAGCATCAATGTGACCAATTCAC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACCAAATCCACACTCTCTaGACATGGGCTCCATACCAA | + |
Preference number: 4 (lower is better) Translates to: TFSSCLPVEALWLGFGTDQIHTL*TWAPYQ Trigger: TTGGTATGGAGCCCATGTTCAGAGAGTGTGGATTTG...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
CDS-3UTR GCA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCGCAAGTAGTCAGTGTTaGTGTTACACATCTCGTTGT | + |
Preference number: 4 (lower is better) Translates to: EALWLGFGTDRDLDTAPSASSQC*CYTSRC Trigger: ACAACGAGATGTGTAACAGCAACACTGACTACTTGC...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TTGCAAGGTCTTGAAGGAGATTCCAGGGCCCCAGAAAACATGCCTGCACTGAAGTCTCCACCTGACTCTTaGTTCAGCAAGAAGACAGCG | + |
Preference number: 4 (lower is better) Translates to: LQGLEGDSRAPENMPALKSPPDS*FSKKTA Trigger: CGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGA...CTTCAGTGCAGGCATGTTTTCTGGGGCCCTGGAATCTCCTTCAAGACCTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGATTCTCCATAGCCTGTaGCTGGTTGAGGACTGGGTA | + |
Preference number: 4 (lower is better) Translates to: QAEVVRMDQKSLLFILPMILHSL*LVEDWV Trigger: TACCCAGTCCTCAACCAGGCACAGGCTATGGAGAAT...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCATGCTGTACTGGAGCCTaGTTAGAGGCTGCAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISCCTGA*LEAAAA Trigger: AGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCA...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACTTACACATCTCGTTGTaGTATGTCTGCCAGTCATCG | + |
Preference number: 4 (lower is better) Translates to: GLSLFLRAAFLASSLCSHLHISL*YVCQSS Trigger: CGATGACTGGCAGACATACCACAACGAGATGTGTAA...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACAGGGAGTAGCCGAAGGTaGCCAAGCCTGGCAGTCCGA | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTGSSRR*PSLAVR Trigger: TCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCC...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTAGTAACTCCAGTGTCTaGCAATGTGTCTCTGGCATG | + |
Preference number: 4 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPSNSSV*QCVSGM Trigger: CATGCCAGAGACACATTGCCAGACACTGGAGTTACT...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CACTGCATGGTACTTGGGCATAATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCCCCACTGGGCTCACCTaGAATTCATATTTCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: HCMVLGHNPVVAGRLKEVPTGLT*NSYFRG Trigger: TCCCCTGAAATATGAATTCCAGGTGAGCCCAGTGGG...GACTTCTTTAAGCCGACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
3UTR CAA 72 bp | CATAAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATaGCTCTTGCGTCTGAGCACGCAGGTCGTAAGAACA | + |
Preference number: 4 (lower is better) Translates to: HKAHSGDLLSSS*LLRLSTQVVRT Trigger: TGTTCTTACGACCTGCGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAAAGTGGACCTCAGTGTaGTTCTCCATAGCCTGTGCC | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISKWTSV*FSIACA Trigger: GGCACAGGCTATGGAGAATCACACTGAGGTCCACTT...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACATGTTGTCGCTCAGTCTaGCGATGGAGGGCGACCGAG | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTCCRSV*RWRATE Trigger: CTCGGTCGCCCTCCATCGGCAGACTGAGCGACAACA...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCACGAGCTGTAGGTCATTaGCACGCACATAGCACTTGC | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISRAVGH*HAHSTC Trigger: GCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCG...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGCAAGTAGTCAGTGTTaGTGTTACACATCTCGTTGT | + |
Preference number: 4 (lower is better) Translates to: SLLFILPMSAAPGPCSLKASSQC*CYTSRC Trigger: ACAACGAGATGTGTAACAGCAACACTGACTACTTGC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | ATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAAGCGCCCACCTGCGTaGCCTTCAGCACCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: ILVRSPYTKKAQDRGSCYKRPPA*PSAPAS Trigger: GGAAGCAGGTGCTGAAGGGCACGCAGGTGGGCGCTT...ATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAATCATTGTTCAGGTCTaGCAGGGCAATGGCACTGCC | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISIIVQV*QGNGTA Trigger: GGCAGTGCCATTGCCCTGGCAGACCTGAACAATGAT...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCATTACACATCTCGTTGTaGTATGTCTGCCAGTCATCG | + |
Preference number: 4 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPLHISL*YVCQSS Trigger: CGATGACTGGCAGACATACCACAACGAGATGTGTAA...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAGCCACCAAGGTCCTATaGAGGATATTGATGACAGGC | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILATKVL*RILMTG Trigger: GCCTGTCATCAATATCCTCCATAGGACCTTGGTGGC...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCACTGGCAATGTGTCTCTaGCATGGAGAAGAAGCCGTG | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISLAMCL*HGEEAV Trigger: CACGGCTTCTTCTCCATGCCAGAGACACATTGCCAG...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAGTCGCACTTGTTGTCTaGCCCGCACTCTTTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISVALVV*PALFLE Trigger: TTCCAGAAAGAGTGCGGGCCAGACAACAAGTGCGAC...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATATCCTCAATAATGTaGTGGTCAGGGTCACTTTTC | + |
Preference number: 4 (lower is better) Translates to: VSLCSFGLRFLPALSVATISSIM*WSGSLF Trigger: GAAAAGTGACCCTGACCATCACATTATTGAGGATAT...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATGACCAGGACTCTACCTaGAGGGCCCTGGCTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDDQDST*RALAGH Trigger: GTGGCCAGCCAGGGCCCTGCAGGTAGAGTCCTGGTC...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | ATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATCACGCACATAGCACTTaGCCACCATGCGCCGCTGGT | + |
Preference number: 4 (lower is better) Translates to: ILVRSPYTKKAQDRGSCYHAHST*PPCAAG Trigger: ACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTG...ATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCATCCTGGAATCCATCCTaGTTGATGTCACCGATGCTG | + |
Preference number: 4 (lower is better) Translates to: AWFWHRQRLGYGTLHDISSWNPS*LMSPML Trigger: CAGCATCGGTGACATCAACCAGGATGGATTCCAGGA...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACACCAACACAGCTGGCCTaGCCACCAAGGTCCTATGGA | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTPTQLA*PPRSYG Trigger: TCCATAGGACCTTGGTGGCCAGGCCAGCTGTGTTGG...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACATGTTCCGCCTGTAGTTaGGGTTCCCAGCGCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTCSACS*GSQRSG Trigger: ACCAGAGCGCTGGGAACCCCAACTACAGGCGGAACA...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATACAGGCGGGGAACTCTaGTCTCCCCCTGGATCCAGT | + |
Preference number: 4 (lower is better) Translates to: ILVRSPYTKKAQDRGSCYTGGEL*SPPGSS Trigger: ACTGGATCCAGGGGGAGACCAGAGTTCCCCGCCTGT...ATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | ATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATTGTTCCGCCTGTAGTTaGGGTTCCCAGCGCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: ILVRSPYTKKAQDRGSCYCSACS*GSQRSG Trigger: ACCAGAGCGCTGGGAACCCCAACTACAGGCGGAACA...ATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGGTGAATTGGTCACATTaGTGCTCAAAAACAGTTTCT | + |
Preference number: 4 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTVNWSH*CSKTVS Trigger: AGAAACTGTTTTTGAGCATCAATGTGACCAATTCAC...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACACTCCTCCACCAGCTCTaGGTCAATGTCCACAGAGAA | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTLLHQL*VNVHRE Trigger: TTCTCTGTGGACATTGACTCAGAGCTGGTGGAGGAG...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACAGTCGCACTTGTTGTCTaGCCCGCACTCTTTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTVALVV*PALFLE Trigger: TTCCAGAAAGAGTGCGGGCCAGACAACAAGTGCGAC...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR TCA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAATATCCTCAATAATGTaGTGGTCAGGGTCACTTTTC | + |
Preference number: 4 (lower is better) Translates to: LCSFGLRFLPALSVATILISSIM*WSGSLF Trigger: GAAAAGTGACCCTGACCATCACATTATTGAGGATAT...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATGTGTCTCTGCTGTACTaGAGCCTGCTTAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDVSLLY*SLLRGC Trigger: GCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACAC...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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3UTR CAA 72 bp | ATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATaGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: ISSFILDSKLHP*TMAQGGFSVEE Trigger: CTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATAAGTGGACCTCAGTGTaGTTCTCCATAGCCTGTGCC | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDKWTSV*FSIACA Trigger: GGCACAGGCTATGGAGAATCACACTGAGGTCCACTT...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR TCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATTCCTCTGGTTCCGTTTaGAGGGGTTTCCTAGCTCAC | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDSSGSV*RGFLAH Trigger: GTGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGA...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR GCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATATCATTGTTCAGGTCTaGCAGGGCAATGGCACTGCC | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDIIVQV*QGNGTA Trigger: GGCAGTGCCATTGCCCTGGCAGACCTGAACAATGAT...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCAGCACCAGTCCGGTTaGTATAGTCATCACCCACAG | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDQHQSG*YSHHPQ Trigger: CTGTGGGTGATGACTATACCAACCGGACTGGTGCTG...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | TGTCTCCTCCGCATCAGTAGTTTTATTCTGGACAGTAAACTCCATCCATTGACAGCAAGTAGTCAGTGTTaGTGTTACACATCTCGTTGT | + |
Preference number: 4 (lower is better) Translates to: CLLRISSFILDSKLHPLTASSQC*CYTSRC Trigger: ACAACGAGATGTGTAACAGCAACACTGACTACTTGC...TGTCAATGGATGGAGTTTACTGTCCAGAATAAAACTACTGATGCGGAGGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATAGTAACTCCAGTGTCTaGCAATGTGTCTCTGGCATG | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDSNSSV*QCVSGM Trigger: CATGCCAGAGACACATTGCCAGACACTGGAGTTACT...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR GCA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATTTCATCTCAGCCTTCTaGCTCTTAGCTTCATACAGG | + |
Preference number: 4 (lower is better) Translates to: GNSLFILVRSPYTKKAQDFISAF*LLASYR Trigger: CCTGTATGAAGCTAAGAGGCAGAAGGCTGAGATGAA...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
||
CDS GCA 90 bp | GCTAGTGTGACAGGCGGGGAACTCTGGTCTCCCCCTGGATCCAGTTaGCGCCGGCGGCGCTGTGGCGACAGTGGTGTGACTCCAGGGTCA | + |
Preference number: 5 (lower is better) Translates to: ASVTGGELWSPPGSS*RRRRCGDSGVTPGS Trigger: TGACCCTGGAGTCACACCACTGTCGCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGAGACCAGAGTTCCCCGCCTGTCACACTAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | GGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCTCCCCCTGGATCCAGTaGCCGCCGGCGGCGCTGTGG | + |
Preference number: 5 (lower is better) Translates to: GWALPCHATFKYHTPRGLSPWIQ*PPAALW Trigger: CCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGA...GAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCTCCCCCTGGATCCAGTaGCCGCCGGCGGCGCTGTGG | + |
Preference number: 5 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLSPWIQ*PPAALW Trigger: CCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGA...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CCCACATCAGGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTCCCCCTGGATCCAGTaGCCGCCGGCGGCGCTGTGG | + |
Preference number: 5 (lower is better) Translates to: PTSGTFSSCLPVEALWLGSPWIQ*PPAALW Trigger: CCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGA...ACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCCTGATGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS CCA 90 bp | GGAACTCTGGTCTCCCCCTGGATCCAGTTGCCGCCGGCGGCGCTGTaGCGACAGTGGTGTGACTCCAGGGTCAGAGAGAGTAAGGTTGAG | + |
Preference number: 5 (lower is better) Translates to: GTLVSPWIQLPPAAL*RQWCDSRVRESKVE Trigger: CTCAACCTTACTCTCTCTGACCCTGGAGTCACACCACTGTCGCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGAGACCAGAGTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 90 bp | TCCAGTTGTAGGCACCAGGGGCACCGAAGTATACGGTGTTCTGGGTaGAGCCGCCGCTGGTGCCCAGCTGGCACATGCCGGTCTGCAAGT | + |
Preference number: 5 (lower is better) Translates to: SSCRHQGHRSIRCSG*SRRWCPAGTCRSAS Trigger: ACTTGCAGACCGGCATGTGCCAGCTGGGCACCAGCGGCGGCTTCACCCAGAACACCGTATACTTCGGTGCCCCTGGTGCCTACAACTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
||
CDS GCA 90 bp | CATCGCCGGGGTCGAGCTGTAGGTCATTGCCACGCACATAGCACTTaGCCACCATGCGCCGCTGGTCTTCTAGCCCAGACCACAGCACCT | + |
Preference number: 5 (lower is better) Translates to: HRRGRAVGHCHAHST*PPCAAGLLAQTTAP Trigger: AGGTGCTGTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCGACCCCGGCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
||
CDS CCA 90 bp | GAGCCCCGGCCAGAAGGCTGGAAAAGGAAGGCGGGTGGGTCAGCCTaGCTTTGCAAGCCTCCCTCCAGTCAGCCTGCAAATCCACACTCT | + |
Preference number: 5 (lower is better) Translates to: EPRPEGWKRKAGGSA*LCKPPSSQPANPHS Trigger: AGAGTGTGGATTTGCAGGCTGACTGGAGGGAGGCTTGCAAAGCCAGGCTGACCCACCCGCCTTCCTTTTCCAGCCTTCTGGCCGGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
CDS-3UTR CAA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGCAGCGGGCACGGCCATaGGAGCAGGTCAACACAGTC | + |
Preference number: 5 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWQRARP*EQVNTV Trigger: GACTGTGTTGACCTGCTCCAATGGCCGTGCCCGCTG...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | GGCTGGGCCCTCCCCTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCTGGGTCAGCCTGGCTTaGCAAGCCTCCCTCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: GWALPCHATFKYHTPRGLWVSLA*QASLQS Trigger: TGACTGGAGGGAGGCTTGCAAAGCCAGGCTGACCCA...GAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAGGGGAGGGCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
||
CDS GCA 90 bp | GGTCGAGCTGTAGGTCATTGCCACGCACATAGCACTTGCCCACCATaGGCCGCTGGTCTTCTAGCCCAGACCACAGCACCTTGGTGTACC | + |
Preference number: 5 (lower is better) Translates to: GRAVGHCHAHSTCPP*AAGLLAQTTAPWCT Trigger: GGTACACCAAGGTGCTGTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
||
CDS GCA 90 bp | GGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATGGCACTaGCAAAATAAGCGCCCACCTGCGTGCCCTTCAGCACCTGCTTCC | + |
Preference number: 5 (lower is better) Translates to: GPATHHCSGLPGQWH*QNKRPPACPSAPAS Trigger: GGAAGCAGGTGCTGAAGGGCACGCAGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS CCA 90 bp | CCAGGAGGTCCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATaGCACTGCCAAAATAAGCGCCCACCTGCGTGCCCTTCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: PGGPATHHCSGLPGQ*HCQNKRPPACPSAP Trigger: AGGTGCTGAAGGGCACGCAGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS CCA 90 bp | CCACACCCGTGCTTTCACGGTCACATTGGTAATGTTGGAGGTGTCTaGAAGGGGGCACTCCAGCCACACACAGCGGGCACGGCCATTGGA | + |
Preference number: 5 (lower is better) Translates to: PHPCFHGHIGNVGGV*KGALQPHTAGTAIG Trigger: TCCAATGGCCGTGCCCGCTGTGTGTGGCTGGAGTGCCCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGGACAGCGCCCATATGTaGGTGCCGTGGGGCACCCGT | + |
Preference number: 5 (lower is better) Translates to: VSLCSFGLRFLPALSVATDSAHM*VPWGTR Trigger: ACGGGTGCCCCACGGCACCAACATATGGGCGCTGTC...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCGACAGCGCCCATATGTaGGTGCCGTGGGGCACCCGT | + |
Preference number: 5 (lower is better) Translates to: HGLSLFLRAAFLASSLCSDSAHM*VPWGTR Trigger: ACGGGTGCCCCACGGCACCAACATATGGGCGCTGTC...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS TCA 90 bp | CACCTGCGTGCCCTTCAGCACCTGCTTCCTCTGCAGGTCTCCACCTaGCTCTTGCTTCAGCAAGAAGACAGCGCCCATATGTTGGTGCCG | + |
Preference number: 5 (lower is better) Translates to: HLRALQHLLPLQVST*LLLQQEDSAHMLVP Trigger: CGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGCACGCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 90 bp | TGTGGTATGTCTGCCAGTCATCGCCGGGGTCGAGCTGTAGGTCATTaGCACGCACATAGCACTTGCCCACCATGCGCCGCTGGTCTTCTA | + |
Preference number: 5 (lower is better) Translates to: CGMSASHRRGRAVGH*HAHSTCPPCAAGLL Trigger: TAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTGGCAATGACCTACAGCTCGACCCCGGCGATGACTGGCAGACATACCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS GCA 90 bp | GTGCCCTTCAGCACCTGCTTCCTCTGCAGGTCTCCACCTGACTCTTaGTTCAGCAAGAAGACAGCGCCCATATGTTGGTGCCGTGGGGCA | + |
Preference number: 5 (lower is better) Translates to: VPFSTCFLCRSPPDS*FSKKTAPICWCRGA Trigger: TGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | CACATCCATCTTCCCGCTCAGGGAGTAGCCGAAGGTGGCCAAGCCTaGCAGTCCGAGTTTCTCTCCATGGATTATCTGCTGGGGCTGCCT | + |
Preference number: 5 (lower is better) Translates to: HIHLPAQGVAEGGQA*QSEFLSMDYLLGLP Trigger: AGGCAGCCCCAGCAGATAATCCATGGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCCTGAGCGGGAAGATGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGAGGTAGCGCTGTaGTCGCTCAGTCTGCCGATG | + |
Preference number: 5 (lower is better) Translates to: PWGRGRKPQAAQNLISVVKEVAL*SLSLPM Trigger: CATCGGCAGACTGAGCGACAACAGCGCTACCTCCTT...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCCCAGACCACAGCACCTaGGTGTACCGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: EALWLGFGTDRDLDTAPSPDHST*VYRWAQ Trigger: CTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTGG...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CCCTGGGGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCTCCTGCCACCCATCATaGTTCAGGTCTGCCAGGGCA | + |
Preference number: 5 (lower is better) Translates to: PWGRGRKPQAAQNLISVVSCHPS*FRSARA Trigger: TGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGA...GACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCCCCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACCAGCGGGCACGGCCATaGGAGCAGGTCAACACAGTC | + |
Preference number: 5 (lower is better) Translates to: GLSLFLRAAFLASSLCSHQRARP*EQVNTV Trigger: GACTGTGTTGACCTGCTCCAATGGCCGTGCCCGCTG...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 90 bp | GCAGGAGGGAAGGTTGATCAGGGAAGGATGCGCCCGCCTGGTTCATaGAGACATAGACGGCACCCCCTACCTCCTCTTTCCGTTCGAAGT | + |
Preference number: 5 (lower is better) Translates to: AGGKVDQGRMRPPGS*RHRRHPLPPLSVRS Trigger: ACTTCGAACGGAAAGAGGAGGTAGGGGGTGCCGTCTATGTCTTCATGAACCAGGCGGGCGCATCCTTCCCTGATCAACCTTCCCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 90 bp | CGCTGGTGCCCAGCTGGCACATGCCGGTCTGCAAGTAGTCAGTGTTaGTGTTACACATCTCGTTGTGGTATGTCTGCCAGTCATCGCCGG | + |
Preference number: 5 (lower is better) Translates to: RWCPAGTCRSASSQC*CYTSRCGMSASHRR Trigger: CCGGCGATGACTGGCAGACATACCACAACGAGATGTGTAACAGCAACACTGACTACTTGCAGACCGGCATGTGCCAGCTGGGCACCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CCA 90 bp | TTGAAGGGGTTTCCTAGCTCACACAGGATGGTCTCGTTATTAGCTTaGCAGGTCCCAGACGGGCGCACGGAGGACAGTAGCAGGGCGGAT | + |
Preference number: 5 (lower is better) Translates to: LKGFPSSHRMVSLLA*QVPDGRTEDSSRAD Trigger: ATCCGCCCTGCTACTGTCCTCCGTGCGCCCGTCTGGGACCTGCCAAGCTAATAACGAGACCATCCTGTGTGAGCTAGGAAACCCCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CACGGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCCAGACCACAGCACCTaGGTGTACCGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: HGLSLFLRAAFLASSLCSPDHST*VYRWAQ Trigger: CTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTGG...GCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGACCAGACCACAGCACCTaGGTGTACCGATGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: GRGRKPQAAQNLISVVKGPDHST*VYRWAQ Trigger: CTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTGG...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACTCCTGCCACCCATCATaGTTCAGGTCTGCCAGGGCA | + |
Preference number: 5 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHSCHPS*FRSARA Trigger: TGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGA...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | AGGTGGGTAGCGGTCCTCCTCCCGGATACGCACTGCATGGTACTTGGGCATAATAAGCAGGAGGGAAGGTaGATCAGGGAAGGATGCGCC | + |
Preference number: 5 (lower is better) Translates to: RWVAVLLPDTHCMVLGHNKQEGR*IREGCA Trigger: GGCGCATCCTTCCCTGATCAACCTTCCCTCCTGCTT...ATTATGCCCAAGTACCATGCAGTGCGTATCCGGGAGGAGGACCGCTACCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR CAA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTCGAGTGCGGGCTCGCTaGAAGAAGCCGCACTTCCAC | + |
Preference number: 5 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPRVRAR*KKPHFH Trigger: GTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTCG...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS GCA 90 bp | CCACCTGACTCTTGCTTCAGCAAGAAGACAGCGCCCATATGTTGGTaGCGTGGGGCACCCGTCACAACAGTGATGATGTCCGTGGGATGT | + |
Preference number: 5 (lower is better) Translates to: PPDSCFSKKTAPICW*RGAPVTTVMMSVGC Trigger: ACATCCCACGGACATCATCACTGTTGTGACGGGTGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 90 bp | TTCTTAGTGTCTCTGCTGTACTGGAGCCTGCTTAGAGGCTGCAGCTaGTCAGACAGGAAGGCTGCTCGCATCTGCAGGTTGCTGTCGCAC | + |
Preference number: 5 (lower is better) Translates to: FLVSLLYWSLLRGCS*SDRKAARICRLLSH Trigger: GTGCGACAGCAACCTGCAGATGCGAGCAGCCTTCCTGTCTGAGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACACTAAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 90 bp | GTCAGCCTTTCTGTCTCTGACGGCTGGCTCTTCATCTCAGCCTTCTaGCTCTTAGCTTCATACAGGGCACGAGTGCGGGCTCGCTTGAAG | + |
Preference number: 5 (lower is better) Translates to: VSLSVSDGWLFISAF*LLASYRARVRARLK Trigger: CTTCAAGCGAGCCCGCACTCGTGCCCTGTATGAAGCTAAGAGGCAGAAGGCTGAGATGAAGAGCCAGCCGTCAGAGACAGAAAGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS CCA 90 bp | TCTCCACCTGACTCTTGCTTCAGCAAGAAGACAGCGCCCATATGTTaGTGCCGTGGGGCACCCGTCACAACAGTGATGATGTCCGTGGGA | + |
Preference number: 5 (lower is better) Translates to: SPPDSCFSKKTAPIC*CRGAPVTTVMMSVG Trigger: TCCCACGGACATCATCACTGTTGTGACGGGTGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | CCCGGAGCTGCTGTGGTAGATGTAGACTTTGCCCAAGCCCTCAAATaGGGCTCCCACAGCGATGTCCTGGAATCCATCCTGGTTGATGTC | + |
Preference number: 5 (lower is better) Translates to: PGAAVVDVDFAQALK*GSHSDVLESILVDV Trigger: GACATCAACCAGGATGGATTCCAGGACATCGCTGTGGGAGCCCCATTTGAGGGCTTGGGCAAAGTCTACATCTACCACAGCAGCTCCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | CTGCAAGTTGTCCTGGTGACTCGACGTGGACAGCTGAAGAAGTACTaGGAGGTCCCTCGTGTGCAACGTTACCCCGATGACCTCAAAGGC | + |
Preference number: 5 (lower is better) Translates to: LQVVLVTRRGQLKKY*EVPRVQRYPDDLKG Trigger: GCCTTTGAGGTCATCGGGGTAACGTTGCACACGAGGGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAGTCACCAGGACAACTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | ACCAGTGTGCCCAAGGCTGCCAGCCCATCTCCCACTGGGCTCACCTaGAATTCATATTTCAGGGGACTTCCCACATCCTCCGCAGTTTTC | + |
Preference number: 5 (lower is better) Translates to: TSVPKAASPSPTGLT*NSYFRGLPTSSAVF Trigger: GAAAACTGCGGAGGATGTGGGAAGTCCCCTGAAATATGAATTCCAGGTGAGCCCAGTGGGAGATGGGCTGGCAGCCTTGGGCACACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGAAGCAGGAGGGAAGGTaGATCAGGGAAGGATGCGCC | + |
Preference number: 5 (lower is better) Translates to: VSLCSFGLRFLPALSVATKQEGR*IREGCA Trigger: GGCGCATCCTTCCCTGATCAACCTTCCCTCCTGCTT...CGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCGAGTGCGGGCTCGCTaGAAGAAGCCGCACTTCCAC | + |
Preference number: 5 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRRVRAR*KKPHFH Trigger: GTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTCG...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR CAA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCAGTGACCCAGTGCTTCTaGGTGGGTAGCGTGCTCCCT | + |
Preference number: 5 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPVTQCF*VGSVLP Trigger: AGGGAGCACGCTACCCACCAAGAAGCACTGGGTCAC...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120375.8 |
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CDS CCA 90 bp | GGGTCACTTTTCTCTGAAATGTCCATCCGTTCACAGTCGTCCTTGTaGGCCGTGAGGGGACACAGGTACACAGCACCAGTCCGGTTGGTA | + |
Preference number: 5 (lower is better) Translates to: GSLFSEMSIRSQSSL*AVRGHRYTAPVRLV Trigger: TACCAACCGGACTGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTTCAGAGAAAAGTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CCA 90 bp | GCAAAGTCAGGAGTACGGGCTGCAAGTTGTCCTGGTGACTCGACGTaGACAGCTGAAGAAGTACTGGGAGGTCCCTCGTGTGCAACGTTA | + |
Preference number: 5 (lower is better) Translates to: AKSGVRAASCPGDST*TAEEVLGGPSCATL Trigger: TAACGTTGCACACGAGGGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAGTCACCAGGACAACTTGCAGCCCGTACTCCTGACTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | TTGACAAGGTTTCCAGACGGCTGGCAGGGCCAGGAACCATTGCTATaGATGGTGATCTCCGTGGGGTACAGCAGCCACTTGCCATTGGTA | + |
Preference number: 5 (lower is better) Translates to: LTRFPDGWQGQEPLL*MVISVGYSSHLPLV Trigger: TACCAATGGCAAGTGGCTGCTGTACCCCACGGAGATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 90 bp | TCAGAGAGAGTAAGGTTGAGAGGGTTGACAAGGTTTCCAGACGGCTaGCAGGGCCAGGAACCATTGCTATGGATGGTGATCTCCGTGGGG | + |
Preference number: 5 (lower is better) Translates to: SERVRLRGLTRFPDG*QGQEPLLWMVISVG Trigger: CCCCACGGAGATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCCTGTTACACATCTCGTaGTGGTATGTCTGCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLLLHIS*WYVCQS Trigger: TGACTGGCAGACATACCACAACGAGATGTGTAACAG...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGTCCTGCCACCCATCATaGTTCAGGTCTGCCAGGGCA | + |
Preference number: 5 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTSCHPS*FRSARA Trigger: TGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGA...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGAGCTCGCATCTGCAGGTaGCTGTCGCACTTGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: GRGRKPQAAQNLISVVKGARICR*LSHLLS Trigger: AGACAACAAGTGCGACAGCAACCTGCAGATGCGAGC...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | TCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGCTCGCATCTGCAGGTaGCTGTCGCACTTGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: SLLFILPMSAAPGPCSLKARICR*LSHLLS Trigger: AGACAACAAGTGCGACAGCAACCTGCAGATGCGAGC...CTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCCATGCTCTGGCTGCTCGGTGAATaGGTCACATTGATGCTCAAA | + |
Preference number: 5 (lower is better) Translates to: LPMSAAPGPCSLKDAAMLWLLGE*VTLMLK Trigger: TTTGAGCATCAATGTGACCAATTCACCGAGCAGCCA...GAGCATGGCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCATCCTCTGGTTCCGTTaGAAGGGGTTTCCTAGCTCA | + |
Preference number: 5 (lower is better) Translates to: LHPTNVCCARTLLSEGCRILWFR*KGFPSS Trigger: TGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGAT...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACACAGGGCCAGGAACCATaGCTATGGATGGTGATCTCC | + |
Preference number: 5 (lower is better) Translates to: GTFSSCLPVEALWLGFGTQGQEP*LWMVIS Trigger: GGAGATCACCATCCATAGCAATGGTTCCTGGCCCTG...TGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGAGAGGACCTGGGAAATCAGCCTCCACTGCTAGAATGGGGATGCAGCCCCTGGGCTTTCACGGTCACATaGGTAATGTTGGAGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: GEDLGNQPPLLEWGCSPWAFTVT*VMLEVS Trigger: AGACACCTCCAACATTACCAATGTGACCGTGAAAGC...CCAGGGGCTGCATCCCCATTCTAGCAGTGGAGGCTGATTTCCCAGGTCCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS GCA 90 bp | AACAGTTTCTTAGTGTCTCTGCTGTACTGGAGCCTGCTTAGAGGCTaGAGCTGCTCAGACAGGAAGGCTGCTCGCATCTGCAGGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: NSFLVSLLYWSLLRG*SCSDRKAARICRLL Trigger: CAGCAACCTGCAGATGCGAGCAGCCTTCCTGTCTGAGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACACTAAGAAACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS CCA 90 bp | AAGCCCTCAAATGGGGCTCCCACAGCGATGTCCTGGAATCCATCCTaGTTGATGTCACCGATGCTGGCTATAGAGATGCCAAAGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: KPSNGAPTAMSWNPS*LMSPMLAIEMPKAE Trigger: CTCTGCCTTTGGCATCTCTATAGCCAGCATCGGTGACATCAACCAGGATGGATTCCAGGACATCGCTGTGGGAGCCCCATTTGAGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS CCA 90 bp | GGTTTTCATCCACATCCATCTTCCCGCTCAGGGAGTAGCCGAAGGTaGCCAAGCCTGGCAGTCCGAGTTTCTCTCCATGGATTATCTGCT | + |
Preference number: 5 (lower is better) Translates to: GFHPHPSSRSGSSRR*PSLAVRVSLHGLSA Trigger: AGCAGATAATCCATGGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCCTGAGCGGGAAGATGGATGTGGATGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | AAACTCCATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTAAGCAGGAGGGAAGGTaGATCAGGGAAGGATGCGCC | + |
Preference number: 5 (lower is better) Translates to: KLHPLTMAQGGFSVEEPCKQEGR*IREGCA Trigger: GGCGCATCCTTCCCTGATCAACCTTCCCTCCTGCTT...ACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATGGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACTGGAATCCATCCTGGTaGATGTCACCGATGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: GLSLFLRAAFLASSLCSHWNPSW*MSPMLA Trigger: AGCCAGCATCGGTGACATCAACCAGGATGGATTCCA...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | GGGAGGGGAAGAAAGCCACAGGCAGCTCAGAATCTCATCTCTGTGGTCAAGGGATGGAATCCATCCTGGTaGATGTCACCGATGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: GRGRKPQAAQNLISVVKGWNPSW*MSPMLA Trigger: AGCCAGCATCGGTGACATCAACCAGGATGGATTCCA...TCCCTTGACCACAGAGATGAGATTCTGAGCTGCCTGTGGCTTTCTTCCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | AAAGCCCATTCCGGCGACCTGCTTTCTAGTTCATTGCTCTTGCGTCTGAGCACGGCTCGCATCTGCAGGTaGCTGTCGCACTTGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: KAHSGDLLSSSLLLRLSTARICR*LSHLLS Trigger: AGACAACAAGTGCGACAGCAACCTGCAGATGCGAGC...CGTGCTCAGACGCAAGAGCAATGAACTAGAAAGCAGGTCGCCGGAATGGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GAGGCGCTTTGGCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATCCTCTGGTTCCGTTaGAAGGGGTTTCCTAGCTCA | + |
Preference number: 5 (lower is better) Translates to: EALWLGFGTDRDLDTAPSILWFR*KGFPSS Trigger: TGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGAT...GGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGCCAAAGCGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | AAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGGTAAGGTTGAGAGGGTaGACAAGGTTTCCAGACGGC | + |
Preference number: 5 (lower is better) Translates to: KSLLFILPMSAAPGPCSLVRLRG*TRFPDG Trigger: GCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTAC...CAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAAAGGAGGTAGCGCTGTaGTCGCTCAGTCTGCCGATG | + |
Preference number: 5 (lower is better) Translates to: LCSFGLRFLPALSVATILKEVAL*SLSLPM Trigger: CATCGGCAGACTGAGCGACAACAGCGCTACCTCCTT...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | TGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTTGGAATCCATCCTGGTaGATGTCACCGATGCTGGCT | + |
Preference number: 5 (lower is better) Translates to: WIRSLSSSSYQCLLRQDPWNPSW*MSPMLA Trigger: AGCCAGCATCGGTGACATCAACCAGGATGGATTCCA...AGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
||
CDS-3UTR CAA 90 bp | CAGGCTGAGGTGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGCAGGGCCAGGAACCATaGCTATGGATGGTGATCTCC | + |
Preference number: 5 (lower is better) Translates to: QAEVVRMDQKSLLFILPMQGQEP*LWMVIS Trigger: GGAGATCACCATCCATAGCAATGGTTCCTGGCCCTG...CATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCACCTCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | ACCTTTTCCTCCTGTCTCCCAGTAGAGGCGCTTTGGCTTGGTTTTGGCACAGACGTAAGGTTGAGAGGGTaGACAAGGTTTCCAGACGGC | + |
Preference number: 5 (lower is better) Translates to: TFSSCLPVEALWLGFGTDVRLRG*TRFPDG Trigger: GCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTAC...GTCTGTGCCAAAACCAAGCCAAAGCGCCTCTACTGGGAGACAGGAGGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTCATCCTACCAATGTCTGCTGCGCCAGGACCCTGCTCTCTGAAGGATGCCGCTCAGAGAGAGTAAGGTaGAGAGGGTTGACAAGGTTT | + |
Preference number: 5 (lower is better) Translates to: LHPTNVCCARTLLSEGCRSERVR*RGLTRF Trigger: AAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGA...GCGGCATCCTTCAGAGAGCAGGGTCCTGGCGCAGCAGACATTGGTAGGATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGGCTTTCACGGTCACATaGGTAATGTTGGAGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: VSTVQGLCWAQHCKVLKEAFTVT*VMLEVS Trigger: AGACACCTCCAACATTACCAATGTGACCGTGAAAGC...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 90 bp | TTTTCTCTGAAATGTCCATCCGTTCACAGTCGTCCTTGTGGGCCGTaGGGGGACACAGGTACACAGCACCAGTCCGGTTGGTATAGTCAT | + |
Preference number: 5 (lower is better) Translates to: FSLKCPSVHSRPCGP*GDTGTQHQSGWYSH Trigger: ATGACTATACCAACCGGACTGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTTCAGAGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS TCA 90 bp | TCACTGTGCCACCAAAGAAGCTCTGCAACCGATGATTCATTAAGCTaGGCGAGGCCTGGAGGGTGTAGTCCACCTGCAAAGTCAGGAGTA | + |
Preference number: 5 (lower is better) Translates to: SLCHQRSSATDDSLS*ARPGGCSPPAKSGV Trigger: TACTCCTGACTTTGCAGGTGGACTACACCCTCCAGGCCTCGCTCAGCTTAATGAATCATCGGTTGCAGAGCTTCTTTGGTGGCACAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGTCTCTCTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACCTGTTACACATCTCGTaGTGGTATGTCTGCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: GLSLFLRAAFLASSLCSHLLHIS*WYVCQS Trigger: TGACTGGCAGACATACCACAACGAGATGTGTAACAG...GTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAGAGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | ACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGATTCCAATCCTCTGGTTCCGTTaGAAGGGGTTTCCTAGCTCA | + |
Preference number: 5 (lower is better) Translates to: TVQGLCWAQHCKVLKEIPILWFR*KGFPSS Trigger: TGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGAT...TGGAATCTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTACAGGGCCAGGAACCATaGCTATGGATGGTGATCTCC | + |
Preference number: 5 (lower is better) Translates to: LCSFGLRFLPALSVATILQGQEP*LWMVIS Trigger: GGAGATCACCATCCATAGCAATGGTTCCTGGCCCTG...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | AGCCCATATACAAAGAAGGCACAGGATCGGGGAAGTTGTTATAGTACCGTGGGGGTAAGGTTGAGAGGGTaGACAAGGTTTCCAGACGGC | + |
Preference number: 5 (lower is better) Translates to: SPYTKKAQDRGSCYSTVGVRLRG*TRFPDG Trigger: GCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTAC...CCCCACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTGCCATGCTACATTCAAGTATCACACCCCACGTGGTCTCGTGGGGATCTCCAGGAGAACCATGTGGTCTaGTTCTCCATGTTGATGGTA | + |
Preference number: 5 (lower is better) Translates to: LPCYIQVSHPTWSRGDLQENHVV*FSMLMV Trigger: TACCATCAACATGGAGAACAAGACCACATGGTTCTC...CTGGAGATCCCCACGAGACCACGTGGGGTGTGATACTTGAATGTAGCATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 90 bp | GTCAAAGTCTTTGTAGTCCTCAATGAAGGTGCTGTTCCACACCCGTaGTTTCACGGTCACATTGGTAATGTTGGAGGTGTCTGGAAGGGG | + |
Preference number: 5 (lower is better) Translates to: VKVFVVLNEGAVPHP*FHGHIGNVGGVWKG Trigger: CCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGCACCTTCATTGAGGACTACAAAGACTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CATCCATTGACAATGGCTCAAGGGGGATTCAGTGTGGAGGAGCCGTGTCCCCACGGTGAATTGGTCACATaGATGCTCAAAAACAGTTTC | + |
Preference number: 5 (lower is better) Translates to: HPLTMAQGGFSVEEPCPHGELVT*MLKNSF Trigger: GAAACTGTTTTTGAGCATCAATGTGACCAATTCACC...GTGGGGACACGGCTCCTCCACACTGAATCCCCCTTGAGCCATTGTCAATGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GTGTCCACTGTGCAAGGGCTGTGCTGGGCTCAGCATTGCAAGGTCTTGAAGGAGGGTGAATTGGTCACATaGATGCTCAAAAACAGTTTC | + |
Preference number: 5 (lower is better) Translates to: VSTVQGLCWAQHCKVLKEGELVT*MLKNSF Trigger: GAAACTGTTTTTGAGCATCAATGTGACCAATTCACC...CTCCTTCAAGACCTTGCAATGCTGAGCCCAGCACAGCCCTTGCACAGTGGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTATGGCTGCTCGGTGAATaGGTCACATTGATGCTCAAA | + |
Preference number: 5 (lower is better) Translates to: LCSFGLRFLPALSVATILWLLGE*VTLMLK Trigger: TTTGAGCATCAATGTGACCAATTCACCGAGCAGCCA...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CACTGCATGGTACTTGGGCATAATCCGGTAGTAGCGGGTCGGCTTAAAGAAGTCTCAGAGAGAGTAAGGTaGAGAGGGTTGACAAGGTTT | + |
Preference number: 5 (lower is better) Translates to: HCMVLGHNPVVAGRLKEVSERVR*RGLTRF Trigger: AAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGA...GACTTCTTTAAGCCGACCCGCTACTACCGGATTATGCCCAAGTACCATGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS-3UTR CAA 90 bp | TGGTCAGGATGGATCAGAAGTCTCTCCTCTTCATCCTACCAATGTCTGCTGCGCGAGAACCATGTGGTCTaGTTCTCCATGTTGATGGTA | + |
Preference number: 5 (lower is better) Translates to: WSGWIRSLSSSSYQCLLRENHVV*FSMLMV Trigger: TACCATCAACATGGAGAACAAGACCACATGGTTCTC...GCGCAGCAGACATTGGTAGGATGAAGAGGAGAGACTTCTGATCCATCCTGACCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCATGGCTGCTCGGTGAATaGGTCACATTGATGCTCAAA | + |
Preference number: 5 (lower is better) Translates to: AWFWHRQRLGYGTLHDISWLLGE*VTLMLK Trigger: TTTGAGCATCAATGTGACCAATTCACCGAGCAGCCA...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTATCAGAGAGAGTAAGGTaGAGAGGGTTGACAAGGTTT | + |
Preference number: 5 (lower is better) Translates to: LCSFGLRFLPALSVATILSERVR*RGLTRF Trigger: AAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGA...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCAGCGGGCACGGCCATaGGAGCAGGTCAACACAGTC | + |
Preference number: 5 (lower is better) Translates to: GNSLFILVRSPYTKKAQDQRARP*EQVNTV Trigger: GACTGTGTTGACCTGCTCCAATGGCCGTGCCCGCTG...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GCTTGGTTTTGGCACAGACAGAGACTTGGATACGGCACCCTCCATGATATATCAGCTTTCACGGTCACATaGGTAATGTTGGAGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: AWFWHRQRLGYGTLHDISAFTVT*VMLEVS Trigger: AGACACCTCCAACATTACCAATGTGACCGTGAAAGC...TGATATATCATGGAGGGTGCCGTATCCAAGTCTCTGTCTGTGCCAAAACCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | CTTTGTTCCTTCGGGCTGCGTTTCTTGCCAGCTCTCTCTGTAGCCACGATTTTAGAGAACCATGTGGTCTaGTTCTCCATGTTGATGGTA | + |
Preference number: 5 (lower is better) Translates to: LCSFGLRFLPALSVATILENHVV*FSMLMV Trigger: TACCATCAACATGGAGAACAAGACCACATGGTTCTC...TAAAATCGTGGCTACAGAGAGAGCTGGCAAGAAACGCAGCCCGAAGGAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATCTGTTACACATCTCGTaGTGGTATGTCTGCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: GNSLFILVRSPYTKKAQDLLHIS*WYVCQS Trigger: TGACTGGCAGACATACCACAACGAGATGTGTAACAG...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS-3UTR CAA 90 bp | GGGAACAGTTTATTTATTTTAGTGAGAAGCCCATATACAAAGAAGGCACAGGATGGTGAATTGGTCACATaGATGCTCAAAAACAGTTTC | + |
Preference number: 5 (lower is better) Translates to: GNSLFILVRSPYTKKAQDGELVT*MLKNSF Trigger: GAAACTGTTTTTGAGCATCAATGTGACCAATTCACC...ATCCTGTGCCTTCTTTGTATATGGGCTTCTCACTAAAATAAATAAACTGTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 90 bp | CCGGGGTTCACCGCCTCCTTCACCACCAGGAATCGGGTGTCCAGGTaGAAGGCGAAGGCGACCCGGCCGCAAGCCGCCACCATCAAGGCC | + |
Preference number: 6 (lower is better) Translates to: PGFTASFTTRNRVSR*KAKATRPQAATIKA Trigger: GGCCTTGATGGTGGCGGCTTGCGGCCGGGTCGCCTTCGCCTTCAACCTGGACACCCGATTCCTGGTGGTGAAGGAGGCGGTGAACCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS CAA 90 bp | CACAGCGAGGTCCCGGGGAGCCCCGGCCAGAAGGAGGTAGCGCTGTaGTCGCTCAGTCTGCCGATGGAGGGCGACCGAGTAGCCGAAGAG | + |
Preference number: 6 (lower is better) Translates to: HSEVPGSPGQKEVAL*SLSLPMEGDRVAEE Trigger: CTCTTCGGCTACTCGGTCGCCCTCCATCGGCAGACTGAGCGACAACAGCGCTACCTCCTTCTGGCCGGGGCTCCCCGGGACCTCGCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS GCA 72 bp | ACAGGCGGGGAACTCTGGTCTCCCCCTGGATCCAGTTaGCGCCGGCGGCGCTGTGGCGACAGTGGTGTGACT | + |
Preference number: 6 (lower is better) Translates to: TGGELWSPPGSS*RRRRCGDSGVT Trigger: AGTCACACCACTGTCGCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGAGACCAGAGTTCCCCGCCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | ACCGCCTCCTTCACCACCAGGAATCGGGTGTCCAGGTaGAAGGCGAAGGCGACCCGGCCGCAAGCCGCCACC | + |
Preference number: 6 (lower is better) Translates to: TASFTTRNRVSR*KAKATRPQAAT Trigger: GGTGGCGGCTTGCGGCCGGGTCGCCTTCGCCTTCAACCTGGACACCCGATTCCTGGTGGTGAAGGAGGCGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS CAA 72 bp | GTCCCGGGGAGCCCCGGCCAGAAGGAGGTAGCGCTGTaGTCGCTCAGTCTGCCGATGGAGGGCGACCGAGTA | + |
Preference number: 6 (lower is better) Translates to: VPGSPGQKEVAL*SLSLPMEGDRV Trigger: TACTCGGTCGCCCTCCATCGGCAGACTGAGCGACAACAGCGCTACCTCCTTCTGGCCGGGGCTCCCCGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000120375.8 |
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CDS TCA 72 bp | AGGCACCAGGGGCACCGAAGTATACGGTGTTCTGGGTaGAGCCGCCGCTGGTGCCCAGCTGGCACATGCCGG | + |
Preference number: 6 (lower is better) Translates to: RHQGHRSIRCSG*SRRWCPAGTCR Trigger: CCGGCATGTGCCAGCTGGGCACCAGCGGCGGCTTCACCCAGAACACCGTATACTTCGGTGCCCCTGGTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CCA 72 bp | GTCTCCCCCTGGATCCAGTTGCCGCCGGCGGCGCTGTaGCGACAGTGGTGTGACTCCAGGGTCAGAGAGAGT | + |
Preference number: 6 (lower is better) Translates to: VSPWIQLPPAAL*RQWCDSRVRES Trigger: ACTCTCTCTGACCCTGGAGTCACACCACTGTCGCCACAGCGCCGCCGGCGGCAACTGGATCCAGGGGGAGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GGAGCCCCGGCCAGAAGGCTGGAAAAGGAAGGCGGGTaGGTCAGCCTGGCTTTGCAAGCCTCCCTCCAGTCA | + |
Preference number: 6 (lower is better) Translates to: GAPARRLEKEGG*VSLALQASLQS Trigger: TGACTGGAGGGAGGCTTGCAAAGCCAGGCTGACCCACCCGCCTTCCTTTTCCAGCCTTCTGGCCGGGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
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CDS CCA 72 bp | GGGTCCAACACAGCTGGCCTGGCCACCAAGGTCCTATaGAGGATATTGATGACAGGCCGGGCCCGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: GSNTAGLATKVL*RILMTGRARSS Trigger: GCTGCTGCGGGCCCGGCCTGTCATCAATATCCTCCATAGGACCTTGGTGGCCAGGCCAGCTGTGTTGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 72 bp | CGGAGGACAGTAGCAGGGCGGATGGCACCTCTAGGGTaGGCAATGCCTCATGCGCATCTTCCCCAGCCCGTT | + |
Preference number: 6 (lower is better) Translates to: RRTVAGRMAPLG*AMPHAHLPQPV Trigger: AACGGGCTGGGGAAGATGCGCATGAGGCATTGCTCACCCTAGAGGTGCCATCCGCCCTGCTACTGTCCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | CTTGGTGTACCGATGGGCACAGACCAGGACTCTACCTaGAGGGCCCTGGCTGGCCACAGTCACTCCAAGCCA | + |
Preference number: 6 (lower is better) Translates to: LGVPMGTDQDST*RALAGHSHSKP Trigger: TGGCTTGGAGTGACTGTGGCCAGCCAGGGCCCTGCAGGTAGAGTCCTGGTCTGTGCCCATCGGTACACCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS GCA 72 bp | GGCTGCAGCTGCTCAGACAGGAAGGCTGCTCGCATCTaGAGGTTGCTGTCGCACTTGTTGTCTGGCCCGCAC | + |
Preference number: 6 (lower is better) Translates to: GCSCSDRKAARI*RLLSHLLSGPH Trigger: GTGCGGGCCAGACAACAAGTGCGACAGCAACCTGCAGATGCGAGCAGCCTTCCTGTCTGAGCAGCTGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | ACAGCTGGCCTGGCCACCAAGGTCCTATGGAGGATATaGATGACAGGCCGGGCCCGCAGCAGCACGATGTGG | + |
Preference number: 6 (lower is better) Translates to: TAGLATKVLWRI*MTGRARSSTMW Trigger: CCACATCGTGCTGCTGCGGGCCCGGCCTGTCATCAATATCCTCCATAGGACCTTGGTGGCCAGGCCAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | GGGCAATGGCACTGCCAAAATAAGCGCCCACCTGCGTaGCCTTCAGCACCTGCTTCCTCTGCAGGTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: GQWHCQNKRPPA*PSAPASSAGLH Trigger: GTGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGCACGCAGGTGGGCGCTTATTTTGGCAGTGCCATTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | TGCGCCGCTGGTCTTCTAGCCCAGACCACAGCACCTTaGTGTACCGATGGGCACAGACCAGGACTCTACCTG | + |
Preference number: 6 (lower is better) Translates to: CAAGLLAQTTAP*CTDGHRPGLYL Trigger: CAGGTAGAGTCCTGGTCTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTGGGCTAGAAGACCAGCGGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS TCA 72 bp | ACGGCTGGCAGGGCCAGGAACCATTGCTATGGATGGTaGTCTCCGTGGGGTACAGCAGCCACTTGCCATTGG | + |
Preference number: 6 (lower is better) Translates to: TAGRARNHCYGW*SPWGTAATCHW Trigger: CCAATGGCAAGTGGCTGCTGTACCCCACGGAGATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | GTAGGTCATTGCCACGCACATAGCACTTGCCCACCATaGGCCGCTGGTCTTCTAGCCCAGACCACAGCACCT | + |
Preference number: 6 (lower is better) Translates to: VGHCHAHSTCPP*AAGLLAQTTAP Trigger: AGGTGCTGTGGTCTGGGCTAGAAGACCAGCGGCGCATGGTGGGCAAGTGCTATGTGCGTGGCAATGACCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CCA 72 bp | CCTGCCACCCATCATTGTTCAGGTCTGCCAGGGCAATaGCACTGCCAAAATAAGCGCCCACCTGCGTGCCCT | + |
Preference number: 6 (lower is better) Translates to: PATHHCSGLPGQ*HCQNKRPPACP Trigger: AGGGCACGCAGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | CCACATCCATCTTCCCGCTCAGGGAGTAGCCGAAGGTaGCCAAGCCTGGCAGTCCGAGTTTCTCTCCATGGA | + |
Preference number: 6 (lower is better) Translates to: PHPSSRSGSSRR*PSLAVRVSLHG Trigger: TCCATGGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCCTGAGCGGGAAGATGGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | ATGCGCCGCTGGTCTTCTAGCCCAGACCACAGCACCTaGGTGTACCGATGGGCACAGACCAGGACTCTACCT | + |
Preference number: 6 (lower is better) Translates to: MRRWSSSPDHST*VYRWAQTRTLP Trigger: AGGTAGAGTCCTGGTCTGTGCCCATCGGTACACCAAGGTGCTGTGGTCTGGGCTAGAAGACCAGCGGCGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CAA 90 bp | CGCTGTGGCGACAGTGGTGTGACTCCAGGGTCAGAGAGAGTAAGGTaGAGAGGGTTGACAAGGTTTCCAGACGGCTGGCAGGGCCAGGAA | + |
Preference number: 6 (lower is better) Translates to: RCGDSGVTPGSERVR*RGLTRFPDGWQGQE Trigger: TTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGACCCTGGAGTCACACCACTGTCGCCACAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 90 bp | AGAGGGTTGACAAGGTTTCCAGACGGCTGGCAGGGCCAGGAACCATaGCTATGGATGGTGATCTCCGTGGGGTACAGCAGCCACTTGCCA | + |
Preference number: 6 (lower is better) Translates to: RGLTRFPDGWQGQEP*LWMVISVGYSSHLP Trigger: TGGCAAGTGGCTGCTGTACCCCACGGAGATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 90 bp | AAGGTGCTGTTCCACACCCGTGCTTTCACGGTCACATTGGTAATGTaGGAGGTGTCTGGAAGGGGGCACTCCAGCCACACACAGCGGGCA | + |
Preference number: 6 (lower is better) Translates to: KVLFHTRAFTVTLVM*EVSGRGHSSHTQRA Trigger: TGCCCGCTGTGTGTGGCTGGAGTGCCCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 72 bp | AAATGTCCATCCGTTCACAGTCGTCCTTGTGGGCCGTaGGGGGACACAGGTACACAGCACCAGTCCGGTTGG | + |
Preference number: 6 (lower is better) Translates to: KCPSVHSRPCGP*GDTGTQHQSGW Trigger: CCAACCGGACTGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS GCA 72 bp | CACCAGGAGGTCCTGCCACCCATCATTGTTCAGGTCTaGCAGGGCAATGGCACTGCCAAAATAAGCGCCCAC | + |
Preference number: 6 (lower is better) Translates to: HQEVLPPIIVQV*QGNGTAKISAH Trigger: GTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGGCAGACCTGAACAATGATGGGTGGCAGGACCTCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | TCTCTGCTGTACTGGAGCCTGCTTAGAGGCTGCAGCTaGTCAGACAGGAAGGCTGCTCGCATCTGCAGGTTG | + |
Preference number: 6 (lower is better) Translates to: SLLYWSLLRGCS*SDRKAARICRL Trigger: CAACCTGCAGATGCGAGCAGCCTTCCTGTCTGAGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | CTTCAGCAAGAAGACAGCGCCCATATGTTGGTGCCGTaGGGCACCCGTCACAACAGTGATGATGTCCGTGGG | + |
Preference number: 6 (lower is better) Translates to: LQQEDSAHMLVP*GTRHNSDDVRG Trigger: CCCACGGACATCATCACTGTTGTGACGGGTGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | CTTCCCGCTCAGGGAGTAGCCGAAGGTGGCCAAGCCTaGCAGTCCGAGTTTCTCTCCATGGATTATCTGCTG | + |
Preference number: 6 (lower is better) Translates to: LPAQGVAEGGQA*QSEFLSMDYLL Trigger: CAGCAGATAATCCATGGAGAGAAACTCGGACTGCCAGGCTTGGCCACCTTCGGCTACTCCCTGAGCGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GTCCTGGTGACTCGACGTGGACAGCTGAAGAAGTACTaGGAGGTCCCTCGTGTGCAACGTTACCCCGATGAC | + |
Preference number: 6 (lower is better) Translates to: VLVTRRGQLKKY*EVPRVQRYPDD Trigger: GTCATCGGGGTAACGTTGCACACGAGGGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAGTCACCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GGAGTACGGGCTGCAAGTTGTCCTGGTGACTCGACGTaGACAGCTGAAGAAGTACTGGGAGGTCCCTCGTGT | + |
Preference number: 6 (lower is better) Translates to: GVRAASCPGDST*TAEEVLGGPSC Trigger: ACACGAGGGACCTCCCAGTACTTCTTCAGCTGTCCACGTCGAGTCACCAGGACAACTTGCAGCCCGTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | TTTCCAGACGGCTGGCAGGGCCAGGAACCATTGCTATaGATGGTGATCTCCGTGGGGTACAGCAGCCACTTG | + |
Preference number: 6 (lower is better) Translates to: FPDGWQGQEPLL*MVISVGYSSHL Trigger: CAAGTGGCTGCTGTACCCCACGGAGATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | TGCTTTCACGGTCACATTGGTAATGTTGGAGGTGTCTaGAAGGGGGCACTCCAGCCACACACAGCGGGCACG | + |
Preference number: 6 (lower is better) Translates to: CFHGHIGNVGGV*KGALQPHTAGT Trigger: CGTGCCCGCTGTGTGTGGCTGGAGTGCCCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 90 bp | CCCTCAAATGGGGCTCCCACAGCGATGTCCTGGAATCCATCCTGGTaGATGTCACCGATGCTGGCTATAGAGATGCCAAAGGCAGAGCGG | + |
Preference number: 6 (lower is better) Translates to: PSNGAPTAMSWNPSW*MSPMLAIEMPKAER Trigger: CCGCTCTGCCTTTGGCATCTCTATAGCCAGCATCGGTGACATCAACCAGGATGGATTCCAGGACATCGCTGTGGGAGCCCCATTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 72 bp | GCCCTTCAGCACCTGCTTCCTCTGCAGGTCTCCACCTaGCTCTTGCTTCAGCAAGAAGACAGCGCCCATATG | + |
Preference number: 6 (lower is better) Translates to: ALQHLLPLQVST*LLLQQEDSAHM Trigger: CATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAGAGGAAGCAGGTGCTGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 72 bp | AAGGTTGATCAGGGAAGGATGCGCCCGCCTGGTTCATaGAGACATAGACGGCACCCCCTACCTCCTCTTTCC | + |
Preference number: 6 (lower is better) Translates to: KVDQGRMRPPGS*RHRRHPLPPLS Trigger: GGAAAGAGGAGGTAGGGGGTGCCGTCTATGTCTTCATGAACCAGGCGGGCGCATCCTTCCCTGATCAACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | TTAGTGTCTCTGCTGTACTGGAGCCTGCTTAGAGGCTaGAGCTGCTCAGACAGGAAGGCTGCTCGCATCTGC | + |
Preference number: 6 (lower is better) Translates to: LVSLLYWSLLRG*SCSDRKAARIC Trigger: GCAGATGCGAGCAGCCTTCCTGTCTGAGCAGCTGCAGCCTCTAAGCAGGCTCCAGTACAGCAGAGACACTAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | TCTGTCTCTGACGGCTGGCTCTTCATCTCAGCCTTCTaGCTCTTAGCTTCATACAGGGCACGAGTGCGGGCT | + |
Preference number: 6 (lower is better) Translates to: SVSDGWLFISAF*LLASYRARVRA Trigger: AGCCCGCACTCGTGCCCTGTATGAAGCTAAGAGGCAGAAGGCTGAGATGAAGAGCCAGCCGTCAGAGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS GCA 72 bp | GTCAGCCTGGCTTTGCAAGCCTCCCTCCAGTCAGCCTaGAAATCCACACTCTCTGAACATGGGCTCCATACC | + |
Preference number: 6 (lower is better) Translates to: VSLALQASLQSA*KSTLSEHGLHT Trigger: GGTATGGAGCCCATGTTCAGAGAGTGTGGATTTGCAGGCTGACTGGAGGGAGGCTTGCAAAGCCAGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
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CDS CCA 72 bp | AGTGTGATTCTCCATAGCCTGTGCCTGGTTGAGGACTaGGTAGGCATCCAGAGACCGCAAGCCGAGCTTGAG | + |
Preference number: 6 (lower is better) Translates to: SVILHSLCLVED*VGIQRPQAELE Trigger: CTCAAGCTCGGCTTGCGGTCTCTGGATGCCTACCCAGTCCTCAACCAGGCACAGGCTATGGAGAATCACACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | GTGACTCCAGGGTCAGAGAGAGTAAGGTTGAGAGGGTaGACAAGGTTTCCAGACGGCTGGCAGGGCCAGGAA | + |
Preference number: 6 (lower is better) Translates to: VTPGSERVRLRG*TRFPDGWQGQE Trigger: TTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGACCCTGGAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 90 bp | TCAGGGTCACTTTTCTCTGAAATGTCCATCCGTTCACAGTCGTCCTaGTGGGCCGTGAGGGGACACAGGTACACAGCACCAGTCCGGTTG | + |
Preference number: 6 (lower is better) Translates to: SGSLFSEMSIRSQSS*WAVRGHRYTAPVRL Trigger: CAACCGGACTGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTTCAGAGAAAAGTGACCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CAA 90 bp | GACAGTGGTGTGACTCCAGGGTCAGAGAGAGTAAGGTTGAGAGGGTaGACAAGGTTTCCAGACGGCTGGCAGGGCCAGGAACCATTGCTA | + |
Preference number: 6 (lower is better) Translates to: DSGVTPGSERVRLRG*TRFPDGWQGQEPLL Trigger: TAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGACCCTGGAGTCACACCACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | TCTTGCTTCAGCAAGAAGACAGCGCCCATATGTTGGTaGCGTGGGGCACCCGTCACAACAGTGATGATGTCC | + |
Preference number: 6 (lower is better) Translates to: SCFSKKTAPICW*RGAPVTTVMMS Trigger: GGACATCATCACTGTTGTGACGGGTGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | AGCACCTGCTTCCTCTGCAGGTCTCCACCTGACTCTTaGTTCAGCAAGAAGACAGCGCCCATATGTTGGTGC | + |
Preference number: 6 (lower is better) Translates to: STCFLCRSPPDS*FSKKTAPICWC Trigger: GCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTCAGGTGGAGACCTGCAGAGGAAGCAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | TTCTCTGAAATGTCCATCCGTTCACAGTCGTCCTTGTaGGCCGTGAGGGGACACAGGTACACAGCACCAGTC | + |
Preference number: 6 (lower is better) Translates to: FSEMSIRSQSSL*AVRGHRYTAPV Trigger: GACTGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTTCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CCA 72 bp | GACTCTTGCTTCAGCAAGAAGACAGCGCCCATATGTTaGTGCCGTGGGGCACCCGTCACAACAGTGATGATG | + |
Preference number: 6 (lower is better) Translates to: DSCFSKKTAPIC*CRGAPVTTVMM Trigger: CATCATCACTGTTGTGACGGGTGCCCCACGGCACCAACATATGGGCGCTGTCTTCTTGCTGAAGCAAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GCTGTGGTAGATGTAGACTTTGCCCAAGCCCTCAAATaGGGCTCCCACAGCGATGTCCTGGAATCCATCCTG | + |
Preference number: 6 (lower is better) Translates to: AVVDVDFAQALK*GSHSDVLESIL Trigger: CAGGATGGATTCCAGGACATCGCTGTGGGAGCCCCATTTGAGGGCTTGGGCAAAGTCTACATCTACCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GGAGGTAGCTGTACAAAGCGCAGGGTCCAACACAGCTaGCCTGGCCACCAAGGTCCTATGGAGGATATTGAT | + |
Preference number: 6 (lower is better) Translates to: GGSCTKRRVQHS*PGHQGPMEDID Trigger: ATCAATATCCTCCATAGGACCTTGGTGGCCAGGCCAGCTGTGTTGGACCCTGCGCTTTGTACAGCTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | GGGGCTCCCACAGCGATGTCCTGGAATCCATCCTGGTaGATGTCACCGATGCTGGCTATAGAGATGCCAAAG | + |
Preference number: 6 (lower is better) Translates to: GAPTAMSWNPSW*MSPMLAIEMPK Trigger: CTTTGGCATCTCTATAGCCAGCATCGGTGACATCAACCAGGATGGATTCCAGGACATCGCTGTGGGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | GACAGTGGTGTGACTCCAGGGTCAGAGAGAGTAAGGTaGAGAGGGTTGACAAGGTTTCCAGACGGCTGGCAG | + |
Preference number: 6 (lower is better) Translates to: DSGVTPGSERVR*RGLTRFPDGWQ Trigger: CTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTACTCTCTCTGACCCTGGAGTCACACCACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | AAGGTGCTGTTCCACACCCGTGCTTTCACGGTCACATaGGTAATGTTGGAGGTGTCTGGAAGGGGGCACTCC | + |
Preference number: 6 (lower is better) Translates to: KVLFHTRAFTVT*VMLEVSGRGHS Trigger: GGAGTGCCCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | CTCTTAGCTTCATACAGGGCACGAGTGCGGGCTCGCTaGAAGAAGCCGCACTTCCACAAGAGGAGGATGATG | + |
Preference number: 6 (lower is better) Translates to: LLASYRARVRAR*KKPHFHKRRMM Trigger: CATCATCCTCCTCTTGTGGAAGTGCGGCTTCTTCAAGCGAGCCCGCACTCGTGCCCTGTATGAAGCTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 |
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CDS CAA 90 bp | TCCTCAATGAAGGTGCTGTTCCACACCCGTGCTTTCACGGTCACATaGGTAATGTTGGAGGTGTCTGGAAGGGGGCACTCCAGCCACACA | + |
Preference number: 6 (lower is better) Translates to: SSMKVLFHTRAFTVT*VMLEVSGRGHSSHT Trigger: TGTGTGGCTGGAGTGCCCCCTTCCAGACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGCACCTTCATTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | AATGGGGCTCCCACAGCGATGTCCTGGAATCCATCCTaGTTGATGTCACCGATGCTGGCTATAGAGATGCCA | + |
Preference number: 6 (lower is better) Translates to: NGAPTAMSWNPS*LMSPMLAIEMP Trigger: TGGCATCTCTATAGCCAGCATCGGTGACATCAACCAGGATGGATTCCAGGACATCGCTGTGGGAGCCCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GTGAGCAATGCCTCATGCGCATCTTCCCCAGCCCGTTaGCTGCTCGGTGAATTGGTCACATTGATGCTCAAA | + |
Preference number: 6 (lower is better) Translates to: VSNASCASSPAR*LLGELVTLMLK Trigger: TTTGAGCATCAATGTGACCAATTCACCGAGCAGCCAACGGGCTGGGGAAGATGCGCATGAGGCATTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CCA 72 bp | GTAAGGTTGAGAGGGTTGACAAGGTTTCCAGACGGCTaGCAGGGCCAGGAACCATTGCTATGGATGGTGATC | + |
Preference number: 6 (lower is better) Translates to: VRLRGLTRFPDG*QGQEPLLWMVI Trigger: GATCACCATCCATAGCAATGGTTCCTGGCCCTGCCAGCCGTCTGGAAACCTTGTCAACCCTCTCAACCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | CTTTTCTCTGAAATGTCCATCCGTTCACAGTCGTCCTaGTGGGCCGTGAGGGGACACAGGTACACAGCACCA | + |
Preference number: 6 (lower is better) Translates to: LFSEMSIRSQSS*WAVRGHRYTAP Trigger: TGGTGCTGTGTACCTGTGTCCCCTCACGGCCCACAAGGACGACTGTGAACGGATGGACATTTCAGAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS TCA 72 bp | AGCCTCCCTCCAGTCAGCCTGCAAATCCACACTCTCTaGACATGGGCTCCATACCAATGTCTGGAGATAGGA | + |
Preference number: 6 (lower is better) Translates to: SLPPVSLQIHTL*TWAPYQCLEIG Trigger: TCCTATCTCCAGACATTGGTATGGAGCCCATGTTCAGAGAGTGTGGATTTGCAGGCTGACTGGAGGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107739.8 |
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CDS GCA 72 bp | CCAGCTGGCACATGCCGGTCTGCAAGTAGTCAGTGTTaGTGTTACACATCTCGTTGTGGTATGTCTGCCAGT | + |
Preference number: 6 (lower is better) Translates to: PAGTCRSASSQC*CYTSRCGMSAS Trigger: ACTGGCAGACATACCACAACGAGATGTGTAACAGCAACACTGACTACTTGCAGACCGGCATGTGCCAGCTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 ENSMUST00000145671.2 |
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CDS CAA 72 bp | TCAAAGGCAATGAGCAGCTCCATCCTCTGGTTCCGTTaGAAGGGGTTTCCTAGCTCACACAGGATGGTCTCG | + |
Preference number: 6 (lower is better) Translates to: SKAMSSSILWFR*KGFPSSHRMVS Trigger: CGAGACCATCCTGTGTGAGCTAGGAAACCCCTTCAAACGGAACCAGAGGATGGAGCTGCTCATTGCCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | CCTCCGCAGTTTTCATGGCAGCCTCACCCATCACTGTaGCACCAAAGAAGCTCTGCAACCGATGATTCATTA | + |
Preference number: 6 (lower is better) Translates to: PPQFSWQPHPSL*HQRSSATDDSL Trigger: TAATGAATCATCGGTTGCAGAGCTTCTTTGGTGGCACAGTGATGGGTGAGGCTGCCATGAAAACTGCGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS TCA 72 bp | CTCATGCGCATCTTCCCCAGCCCGTTGGCTGCTCGGTaGATTGGTCACATTGATGCTCAAAAACAGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: LMRIFPSPLAAR*IGHIDAQKQFL Trigger: AAGAAACTGTTTTTGAGCATCAATGTGACCAATTCACCGAGCAGCCAACGGGCTGGGGAAGATGCGCATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS CAA 72 bp | TCCCCAGCCCGTTGGCTGCTCGGTGAATTGGTCACATaGATGCTCAAAAACAGTTTCTTAGTGTCTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: SPARWLLGELVT*MLKNSFLVSLL Trigger: CAGCAGAGACACTAAGAAACTGTTTTTGAGCATCAATGTGACCAATTCACCGAGCAGCCAACGGGCTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |
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CDS GCA 72 bp | TTTGTAGTCCTCAATGAAGGTGCTGTTCCACACCCGTaGTTTCACGGTCACATTGGTAATGTTGGAGGTGTC | + |
Preference number: 6 (lower is better) Translates to: FVVLNEGAVPHP*FHGHIGNVGGV Trigger: GACACCTCCAACATTACCAATGTGACCGTGAAAGCACGGGTGTGGAACAGCACCTTCATTGAGGACTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001548.14 ENSMUST00000107739.8 ENSMUST00000120375.8 |