Pregenerated sensors for ITGA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015533Ensembl transcript IDs: ENSMUST00000056117.10, ENSMUST00000224204.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGTGGCGTTGGGTTaGTATCCATGCTGTAGGAGATGTAGGCGGTGGATAGAGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVGVALG*YPCCRRCRRWIEES Trigger: ACTTTCCTCTATCCACCGCCTACATCTCCTACAGCATGGATACCAACCCAACGCCACCCCTACACACACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 90 bp | TACATGAAGGGTGAGTCCCTTTTGTGTGTAGAGTTGTTCTCTGTGTaGATGGAGATAGATGAGGGAGCTCAGCTGAGAATCCTGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: YMKGESLLCVELFSV*MEIDEGAQLRILPS Trigger: AGAAGGCAGGATTCTCAGCTGAGCTCCCTCATCTATCTCCATGCACACAGAGAACAACTCTACACACAAAAGGGACTCACCCTTCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 90 bp | CTGTTTACATCACAAGGCCTGAGAGGTTGTCAAAATGTAGGCTGTTaGCCCTTCTGTCAACCCAGAGTTTCAAGAGTTAGGGCTGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: LFTSQGLRGCQNVGC*PFCQPRVSRVRAEE Trigger: CTCTTCAGCCCTAACTCTTGAAACTCTGGGTTGACAGAAGGGCCAACAGCCTACATTTTGACAACCTCTCAGGCCTTGTGATGTAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 90 bp | AGGTGTGAGGTAGCCCTTTCTCTCCTAAAACTGTCTGCTTCAAAATaGCAATACTACAATACTGCTAAGCTCAAAGCGCTGAGGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RCEVALSLLKLSASK*QYYNTAKLKALRVG Trigger: ACCCACCCTCAGCGCTTTGAGCTTAGCAGTATTGTAGTATTGCCATTTTGAAGCAGACAGTTTTAGGAGAGAAAGGGCTACCTCACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR TCA 90 bp | GTCCCTTTTGTGTGTAGAGTTGTTCTCTGTGTGCATGGAGATAGATaGGGGAGCTCAGCTGAGAATCCTGCCTTCTGTTCAATGAAATCT | + |
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Preference number: 1 (lower is better) Translates to: VPFVCRVVLCVHGDR*GSSAENPAFCSMKS Trigger: AGATTTCATTGAACAGAAGGCAGGATTCTCAGCTGAGCTCCCTCATCTATCTCCATGCACACAGAGAACAACTCTACACACAAAAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 90 bp | TTCTTTATTAGACTGTGTCACTGTGTTGCTGTCGTGTGGTGGCCATaGAAGAAGCCACTCAGGTTCTTAAGATCACATTTTGTGATCTAC | + |
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Preference number: 1 (lower is better) Translates to: FFIRLCHCVAVVWWP*KKPLRFLRSHFVIY Trigger: GTAGATCACAAAATGTGATCTTAAGAACCTGAGTGGCTTCTTGCATGGCCACCACACGACAGCAACACAGTGACACAGTCTAATAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 90 bp | TGTATATTTTACCCTGACAACTTTGAGTCCTATAAAGCAAAGCTGTaGTTGAATGGACCACATAATTTCCTCTCAAATACAATCTACCTG | + |
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Preference number: 1 (lower is better) Translates to: CIFYPDNFESYKAKL*LNGPHNFLSNTIYL Trigger: CAGGTAGATTGTATTTGAGAGGAAATTATGTGGTCCATTCAACCACAGCTTTGCTTTATAGGACTCAAAGTTGTCAGGGTAAAATATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGTGGCGTaGGGTTGGTATCCATGCTGTAGGAGATGTAGGCGGTGGATAGAG | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCVGVA*GWYPCCRRCRRWIE Trigger: CTCTATCCACCGCCTACATCTCCTACAGCATGGATACCAACCCAACGCCACCCCTACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CAA 90 bp | TCCTTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTaGAACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SFAFRQGLLKSSRIA*NSCYSSGRPQTPGP Trigger: AGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CAA 90 bp | ACTCCTCCCTGGAGTGAGTCTGTTTACATCACAAGGCCTGAGAGGTaGTCAAAATGTAGGCTGTTGGCCCTTCTGTCAACCCAGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: TPPWSESVYITRPER*SKCRLLALLSTQSF Trigger: GAAACTCTGGGTTGACAGAAGGGCCAACAGCCTACATTTTGACAACCTCTCAGGCCTTGTGATGTAAACAGACTCACTCCAGGGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATCCTGTCTCAGCTTCCTaGGTGGTAGCTGAGATTACT | + |
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Preference number: 2 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYPVSAS*VVAEIT Trigger: AGTAATCTCAGCTACCACTCAGGAAGCTGAGACAGG...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAAAGAACATTCCCTATaGACTTTTCCACCCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPKEHSL*TFPPPN Trigger: ATTTGGGGGTGGAAAAGTGCATAGGGAATGTTCTTT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGTTTCCCCTTTCTATATaGTGTCTTTGGTCTTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPFPLSI*CLWSFY Trigger: GTAGAAAGACCAAAGACATCATATAGAAAGGGGAAA...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGGAGCAGCATAAATTaGAAAACAATCTATGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPRSSIN*KTIYAG Trigger: ACCAGCATAGATTGTTTTTCAATTTATGCTGCTCCT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCCAAGTAGCTCTGGACTaGCACCCAGGGGCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: EILVRFSHVGFSYVSGIIQVALD*HPGAWH Trigger: GTGCCAAGCCCCTGGGTGGCAGTCCAGAGCTACTTG...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCGTTGCTGTCGTGTGGTaGCCATGCAAGAAGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: EILVRFSHVGFSYVSGIIVAVVW*PCKKPL Trigger: GAGTGGCTTCTTGCATGGCCACCACACGACAGCAAC...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATATAAAAGGGTTCTCTTaGTTATCCGAGCATTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYIKGFS*LSEHFK Trigger: CTTGAAATGCTCGGATAACCAAGAGAACCCTTTTAT...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCGGTAGTGATTTCTGCTaGTGCTCCAGCTTACAACCC | + |
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Preference number: 2 (lower is better) Translates to: EILVRFSHVGFSYVSGIIGSDFC*CSSLQP Trigger: GGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACC...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CAA 90 bp | ATATTTTACCCTGACAACTTTGAGTCCTATAAAGCAAAGCTGTGGTaGAATGGACCACATAATTTCCTCTCAAATACAATCTACCTGACC | + |
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Preference number: 2 (lower is better) Translates to: IFYPDNFESYKAKLW*NGPHNFLSNTIYLT Trigger: GGTCAGGTAGATTGTATTTGAGAGGAAATTATGTGGTCCATTCAACCACAGCTTTGCTTTATAGGACTCAAAGTTGTCAGGGTAAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTAGGGGTGGCGTTGGGTTaGTATCCATGCTGTAGGAGATGTAGGCGGTGGATA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVGVALG*YPCCRRCRRWI Trigger: TATCCACCGCCTACATCTCCTACAGCATGGATACCAACCCAACGCCACCCCTACACACACACACACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | GGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATaGTACAGCTCAGGGAGACCTCAGACTCCAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GLLKSSRIALNS*YSSGRPQTPGP Trigger: AGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTAGGGGTGGCGTTGGGTTGGTATCCATaGTGTAGGAGATGTAGGCGGTGGATAGAGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: CVCVGVALGWYP*CRRCRRWIEES Trigger: ACTTTCCTCTATCCACCGCCTACATCTCCTACAGCATGGATACCAACCCAACGCCACCCCTACACACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | AGAGGATGTTCCTGCCAAGGTAGTGATTTCTGCTGCTaGTCCAGCTTACAACCCCTCCCGAGCCTTTCCATT | + |
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Preference number: 3 (lower is better) Translates to: RGCSCQGSDFCC*SSLQPLPSLSI Trigger: AATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACATCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | CAACCCAGAGTTTCAAGAGTTAGGGCTGAAGAGTTGTaGCCACCTGAACCCAGTACAGAGGATGTTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: QPRVSRVRAEEL*PPEPSTEDVPA Trigger: GGCAGGAACATCCTCTGTACTGGGTTCAGGTGGGCACAACTCTTCAGCCCTAACTCTTGAAACTCTGGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | GGTGAGTCCCTTTTGTGTGTAGAGTTGTTCTCTGTGTaGATGGAGATAGATGAGGGAGCTCAGCTGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: GESLLCVELFSV*MEIDEGAQLRI Trigger: GATTCTCAGCTGAGCTCCCTCATCTATCTCCATGCACACAGAGAACAACTCTACACACAAAAGGGACTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 72 bp | TCACAAGGCCTGAGAGGTTGTCAAAATGTAGGCTGTTaGCCCTTCTGTCAACCCAGAGTTTCAAGAGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SQGLRGCQNVGC*PFCQPRVSRVR Trigger: CCTAACTCTTGAAACTCTGGGTTGACAGAAGGGCCAACAGCCTACATTTTGACAACCTCTCAGGCCTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATGGGTCATTTCTTCCTTaGCTTTTAGACAGGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYGSFLP*LLDRVS Trigger: GGAGACCCTGTCTAAAAGCAAAGGAAGAAATGACCC...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR TCA 72 bp | AATGGCAATACTACAATACTGCTAAGCTCAAAGCGCTaGGGGTGGGTTGAGAAATGGCTGACAGGACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: NGNTTILLSSKR*GWVEKWLTGLC Trigger: ACACAGTCCTGTCAGCCATTTCTCAACCCACCCTCAGCGCTTTGAGCTTAGCAGTATTGTAGTATTGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 72 bp | TGGGAGATAAACAGAGGACTTTCTCAGCTCAACACCTaGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: WEINRGLSQLNT*NCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGTCCTCTGTTTATCTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 72 bp | TTTATTAGACTGTGTCACTGTGTTGCTGTCGTGTGGTaGCCATGCAAGAAGCCACTCAGGTTCTTAAGATCA | + |
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Preference number: 3 (lower is better) Translates to: FIRLCHCVAVVW*PCKKPLRFLRS Trigger: TGATCTTAAGAACCTGAGTGGCTTCTTGCATGGCCACCACACGACAGCAACACAGTGACACAGTCTAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CCA 72 bp | TTCTTTATTAGACTGTGTCACTGTGTTGCTGTCGTGTaGTGGCCATGCAAGAAGCCACTCAGGTTCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: FFIRLCHCVAVV*WPCKKPLRFLR Trigger: TCTTAAGAACCTGAGTGGCTTCTTGCATGGCCACCACACGACAGCAACACAGTGACACAGTCTAATAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCCATTTTCTTGAAGGTTaGTCATGTCTAGAAGTATCC | + |
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Preference number: 3 (lower is better) Translates to: FAFRQGLLKSSRIALNSCHFLEG*SCLEVS Trigger: GGATACTTCTAGACATGACAAACCTTCAAGAAAATG...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CAA 90 bp | TGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTTTTATATGAGGAGCAGCATAAATaGAAAAACAATCTATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: CSSLQPLPSLSIYVLFLYEEQHK*KNNLCW Trigger: CCAGCATAGATTGTTTTTCAATTTATGCTGCTCCTC...ATATAAAAATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | CACACACACACACACACACACACATACACACGAGTGTaGAATAAATTAACATGCTGTGTGAAATATTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTHTYTRV*NKLTCCVKYSL Trigger: TAGAGAATATTTCACACAGCATGTTAATTTATTGCACACTCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR-3UTR CAA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCAATAAAAGGGTTCTCTaGGTTATCCGAGCATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: EILVRFSHVGFSYVSGIINKRVL*VIRAFQ Trigger: TTGAAATGCTCGGATAACCAAGAGAACCCTTTTATT...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR GCA 72 bp | CTGGATCACGTAACTAAAAGAGTACCAAGCTGTTTTTaGTGTACCTCTCTGACATTTACAGCTAATATTTTT | + |
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Preference number: 3 (lower is better) Translates to: LDHVTKRVPSCF*CTSLTFTANIF Trigger: AAAAATATTAGCTGTAAATGTCAGAGAGGTACAGCAAAAACAGCTTGGTACTCTTTTAGTTACGTGATCCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR TCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACGCAGATCCAAAGGGTTaGCAACATCAGAGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHADPKG*QHQRAS Trigger: AGAAGCCCTCTGATGTTGTCAACCCTTTGGATCTGC...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR TCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACCTTTGTGACCAGAGTTaGATCACTTGCCCCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHLCDQS*ITCPKA Trigger: TGCTTTGGGGCAAGTGATTCAACTCTGGTCACAAAG...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACAGTACTTGGTGCGAATaGTACCCTGGTGACCATTGT | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHSTWCE*YPGDHC Trigger: ACAATGGTCACCAGGGTACCATTCGCACCAAGTACT...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACCTGCAGGTGAAAAGCTaGTCAAGAACTGAAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHLQVKS*SRTESL Trigger: CAGACTTTCAGTTCTTGACCAGCTTTTCACCTGCAG...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCGGCGCGTCTCAGATGTaGCCTGGACCATATCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSGASQM*PGPYPL Trigger: AAGAGGATATGGTCCAGGCCACATCTGAGACGCGCC...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCCCTGGAGGTTACCCTaGATGAATGTCCGTCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSPWRLP*MNVRPH Trigger: ATGCGGACGGACATTCATCCAGGGTAACCTCCAGGG...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACGCTTTGTTTGTTTCTTaGCTCTCACTGAAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHALFVS*LSLKAW Trigger: CCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGC...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCAATGCCATGCTCACTaGGGCACTTCCGGCTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSQCHAH*GTSGCY Trigger: GTAACAGCCGGAAGTGCCCCAGTGAGCATGGCATTG...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR GCA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACCAGGTAACAGATTTCTaGGATGAACCAACCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: RSPFTTPASPGRDAASPHQVTDF*DEPTSH Trigger: ATGTGAGGTTGGTTCATCGCAGAAATCTGTTACCTG...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGTGGCGTaGGGTTGGTATCCATGCTGTAGGAGATGTAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGVA*GWYPCCRRCRR Trigger: CCGCCTACATCTCCTACAGCATGGATACCAACCCAACGCCACCCCTACACACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR CCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCGGCAGGGCTAGTGCCTaGGTTTTCCAAACTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASGRASA*VFQTDV Trigger: GACATCAGTTTGGAAAACCCAGGCACTAGCCCTGCC...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS-3UTR TCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCAAGATCACGGGCTTGTaGGATGTCTCCTGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASKITGL*DVSWTR Trigger: TCTTGTCCAGGAGACATCTCACAAGCCCGTGATCTT...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCCCGGATTCCTGGTaGGGGTCAATCCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCSPDSW*GSIPGS Trigger: TGAGCCTGGGATTGACCCTCACCAGGAATCCGGGGA...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCTACTCTGCTTTCATGTaGAGGTCTTTCAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASYSAFM*RSFSQQ Trigger: CTGCTGGCTGAAAGACCTTCACATGAAAGCAGAGTA...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCGACCCAAGGATTTTCTaGGAGTACTTGGTGCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASDPRIF*EYLVRM Trigger: CATTCGCACCAAGTACTCCCAGAAAATCCTTGGGTC...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGTCAAGAAACTGGTGCTaGTTCAAGATGCCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPSRNWC*FKMPFV Trigger: CACAAAGGGCATCTTGAATCAGCACCAGTTTCTTGA...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCTCGTCATCATTGCATTaGTGGATCACAGTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSSSSLH*WITVFS Trigger: GCTGAAAACTGTGATCCAGCAATGCAATGATGACGA...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGTTTATCTACATCAACTaGGCACAGCACACTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPFIYIN*AQHTAK Trigger: TTTGGCAGTGTGCTGTGCTCAGTTGATGTAGATAAA...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGATCTCATAGAAGTTaGTGTTGGTGGATCGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPRSHRS*CWWIGL Trigger: TAACCCGATCCACCAACATCAACTTCTATGAGATCT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATCTTTCAGCCAGCAGGTaGTGTTACTGCAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYLSASR*CYCRKW Trigger: CCACTTCCTGCAGTAACATCACCTGCTGGCTGAAAG...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCGACCACAGTGTTGTATaGACTTTCCCCTCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASDHSVV*TFPSVF Trigger: AAAAACAGAGGGGAAAGTGCATACAACACTGTGGTC...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGCTGCTGTCAGCTaGACAGTCTGGAAAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCAAAVS*TVWKVE Trigger: TTCGACTTTCCAGACTGTGCAGCTGACAGCAGCGGC...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATATGGCTGGCAGCTGTTaGACATCCAGGATCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYMAGSC*TSRIRS Trigger: TGACCTGATCCTGGATGTCCAACAGCTGCCAGCCAT...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATCTGATGTCGCCAGCCTaGTCTGTTTGTATCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYLMSPA*SVCIPV Trigger: GACTGGGATACAAACAGACCAGGCTGGCGACATCAG...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | TGTCAACCCAGAGTTTCAAGAGTTAGGGCTGAAGAGTaGTGCCCACCTGAACCCAGTACAGAGGATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQPRVSRVRAEE*CPPEPSTEDVP Trigger: AGGAACATCCTCTGTACTGGGTTCAGGTGGGCACAACTCTTCAGCCCTAACTCTTGAAACTCTGGGTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCTCTTATATTGTCTTTTaGAGAAGCCGAGCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASSYIVF*RSRAST Trigger: TGTGGAAGCTCGGCTTCTTCAAAAGACAATATAAGA...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGACCACCATATTCTTCTaGAAGAATCGCTCACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPTTIFF*KNRSLF Trigger: AAACAGTGAGCGATTCTTGCAGAAGAATATGGTGGT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCATGGTAAAAGTCACCTaGTGTTCACTCTTTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASMVKVT*CSLFKA Trigger: TGCCTTAAAGAGTGAACAGCAGGTGACTTTTACCAT...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | TTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTaGAACTCATGCTACAGCTCAGGGAGACCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FRQGLLKSSRIA*NSCYSSGRPQT Trigger: AGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | TGGAGTGAGTCTGTTTACATCACAAGGCCTGAGAGGTaGTCAAAATGTAGGCTGTTGGCCCTTCTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: WSESVYITRPER*SKCRLLALLST Trigger: GGTTGACAGAAGGGCCAACAGCCTACATTTTGACAACCTCTCAGGCCTTGTGATGTAAACAGACTCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | GTGAGTCCCATTTCTTTATTAGACTGTGTCACTGTGTaGCTGTCGTGTGGTGGCCATGCAAGAAGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPISLLDCVTV*LSCGGHARSHS Trigger: TGAGTGGCTTCTTGCATGGCCACCACACGACAGCAACACAGTGACACAGTCTAATAAAGAAATGGGACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCTGGTTCTGGAGGTTTTaGAGATTAAAGTCGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASWFWRF*RLKSKL Trigger: TAACTTCGACTTTAATCTTCAAAACCTCCAGAACCA...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGATGCTTGCTGAATTTTaGAGATTCAGCTTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPMLAEF*RFSFSQ Trigger: CTGTGAAAAGCTGAATCTGCAAAATTCAGCAAGCAT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCAGAACAGATCCCAGTTaGATAATACTGATTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSCYSSGRPQTPGPVSASRTDPS*IILIST Trigger: TGTGGAAATCAGTATTATGCAACTGGGATCTGTTCT...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACCGAGCATTTCCAGTaGCTTCTGGCCCTTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCTEHFQ*LLALQE Trigger: TTCTTGAAGGGCCAGAAGGCACTGGAAATGCTCGGT...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCAGCCTGAACTGCAGGTaGAAAGCTGGTCAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSKSWEKESVEARDGSLNCR*KAGQEL Trigger: CAGTTCTTGACCAGCTTTTCACCTGCAGTTCAGGCT...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATGAGCGTAATCTGCACTaGATCCAACTTGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYERNLH*IQLVPF Trigger: AAATGGCACAAGTTGGATTCAGTGCAGATTACGCTC...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAGCACAGCACACTaGCAAAATAGGAGCCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCLSTAH*QNRSQS Trigger: AGATTGGCTCCTATTTTGGCAGTGTGCTGTGCTCAG...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCAAGTTGTCTCCTCCTTaGACAGTGCCTTCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSKSWEKESVEARDGKLSPP*TVPSML Trigger: CAGCATTGAAGGCACTGTTCAAGGAGGAGACAACTT...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCATCTGGGAGTACTTGGTaGGAATGGTACCCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPSGSTW*EWYPGD Trigger: GTCACCAGGGTACCATTCGCACCAAGTACTCCCAGA...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCGAGCTTCCACAAACCTaGAGTCATAGCCAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FAFRQGLLKSSRIALNSCELPQT*SHSQQQ Trigger: TTGCTGTTGGCTATGACTGCAGGTTTGTGGAAGCTC...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCATTTCCAGTGCCTTCTaGCCCTTCAAGAAACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FAFRQGLLKSSRIALNSCISSAF*PFKKLV Trigger: CACCAGTTTCTTGAAGGGCCAGAAGGCACTGGAAAT...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | GATAAACAGAGGACTTTCTCAGCTCAACACCTGGAATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKQRTFSAQHLE*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGTCCTCTGTTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | AAGTACATGAAGGGTGAGTCCCTTTTGTGTGTAGAGTaGTTCTCTGTGTGCATGGAGATAGATGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYMKGESLLCVE*FSVCMEIDEGA Trigger: AGCTCCCTCATCTATCTCCATGCACACAGAGAACAACTCTACACACAAAAGGGACTCACCCTTCATGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAATTCAAAATACCTTaGACTAGCATTAGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCQFKIP*TSISSR Trigger: GCGGCTGCTAATGCTAGTTCAAGGTATTTTGAATTG...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCAAACTGTTCACTTaGAGGCCCGGAAAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCPKLFT*RPGKYF Trigger: AAAATATTTTCCGGGCCTTCAAGTGAACAGTTTGGG...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCTGGTCAAGAACTaGAAGTCTGGACTAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSAQHLELCVCVCVCVCKLVKN*KSGLTS Trigger: TGATGTTAGTCCAGACTTTCAGTTCTTGACCAGCTT...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTTTTATATCCCGCCAGAAGTCTGTaGATAAGCGTAGTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSSLQPLPSLSIYVLFLYPARSL*ISVVSC Trigger: GCAAGAGACTACGCTTATTCACAGACTTCTGGCGGG...ATATAAAAATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCACTGGCCAGTATAATTTaGTCGAGGAGCACCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPLASII*SRSTSN Trigger: GTTGCTGGTGCTCCTCGAGCAAATTATACTGGCCAG...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCAGGATCAGGTCAGAGATaGAAATTCCATCGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPGSGQR*KFHRCH Trigger: GTGGCAGCGATGGAATTTGCATCTCTGACCTGATCC...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTCATCATTGCATTGCTaGATCACAGTTTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAAPAYNPSRAFPFMYYSSLHC*ITVFSF Trigger: GAAGCTGAAAACTGTGATCCAGCAATGCAATGATGA...ATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCAAATATTTTCGCTCCTaGGAGGCCAACATTATACGC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSKSWEKESVEARDGKYFRS*EANIIR Trigger: GCGTATAATGTTGGCCTCCCAGGAGCGAAAATATTT...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| 3UTR CAA 72 bp | CAGGAGTCATTTAGTAAGACCTGGGGATATTTGTTATaGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QESFSKTWGYLL*SKSWEKESVEA Trigger: GGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATATCCCCAGGTCTTACTAAATGACTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTTTTATATCTTCGTCGGCCACATTaGAAAAGTATCTCTCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSLQPLPSLSIYVLFLYLRRPH*KSISRL Trigger: CAACCGAGAGATACTTTTTCAATGTGGCCGACGAAG...ATATAAAAATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCAGTCAGCAATGCTTTGTaGCCAGAGTTGAATCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPVSNAL*PELNHL Trigger: CAAGTGATTCAACTCTGGTCACAAAGCATTGCTGAC...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCAGGAAGTTTTCATTCTTaGAAGATACAGAAGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPGSFHS*KIQKGR Trigger: CCGCCCCTTCTGTATCTTTCAAGAATGAAAACTTCC...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCGTATCTCGTCATCATTaGATTGCTGGATCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSKSWEKESVEARDGVSRHH*IAGSQF Trigger: AAACTGTGATCCAGCAATGCAATGATGACGAGATAC...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCACTGACCGAATTGTCTaGTTTGTTTGTTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FAFRQGLLKSSRIALNSCTDRIV*FVCFLA Trigger: AGCCAAGAAACAAACAAAGCAGACAATTCGGTCAGT...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCAGCACCAGCAACAAAATaGACACCGTCTTCAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPAPATK*TPSSVE Trigger: TTCTACTGAAGACGGTGTCCATTTTGTTGCTGGTGC...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCCAATGGATACATCAGTaGTGGAATCCCCATTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSKSWEKESVEARDGQWIHQ*WNPHLN Trigger: ATTTAAATGGGGATTCCATCACTGATGTATCCATTG...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTTTTATATTTTTCCTTGGTGTACTaGGGAATGTGGATAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSSLQPLPSLSIYVLFLYFSLVY*GMWIVT Trigger: GGTGACTATCCACATTCCTCAGTACACCAAGGAAAA...ATATAAAAATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCATGTTACTGCAGGAAGTaGTTCTGCAGTCCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMMSLVFLPLTTPPTILPCYCRK*FCSPIL Trigger: AAGAATTGGACTGCAGAACCACTTCCTGCAGTAACA...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCCGTAAGCTGCTGTACTaGATACCCAAACTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EILVRFSHVGFSYVSGIIRKLLY*IPKLFT Trigger: AGTGAACAGTTTGGGTATTCAGTACAGCAGCTTACG...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCGTGGGTTCTTTTCCTTaGTGTACTGAGGAATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EILVRFSHVGFSYVSGIIVGSFP*CTEECG Trigger: TCCACATTCCTCAGTACACCAAGGAAAAGAACCCAC...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCCTCTGTTTTTCAGGATaGCTGAAAATGTTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EILVRFSHVGFSYVSGIILCFSG*LKMLTS Trigger: AGAGGTTAACATTTTCAGTCATCCTGAAAAACAGAG...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCCGCAGATCCAAAGGGTaGACAACATCAGAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSRRSKG*TTSEGF Trigger: GAAGCCCTCTGATGTTGTCAACCCTTTGGATCTGCG...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCAATGGCTGGCAGCTGTaGGACATCCAGGATCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSCYSSGRPQTPGPVSASNGWQL*DIQDQV Trigger: GACCTGATCCTGGATGTCCAACAGCTGCCAGCCATT...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACAATAAAGGATTGAGTTaGAATGGCTGGCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPFTTPASPGRDAASPHNKGLS*NGWQLL Trigger: CAACAGCTGCCAGCCATTCAAACTCAATCCTTTATT...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCCATTCACCACACCAGCGAGCCCTGGCAGGGATGCCGCTAGCCCCCACGCCCATTTTCTTATATaGTCTTTTGAAGAAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPFTTPASPGRDAASPHAHFLI*SFEEAE Trigger: CTCGGCTTCTTCAAAAGACAATATAAGAAAATGGGC...GTGGGGGCTAGCGGCATCCCTGCCAGGGCTCGCTGGTGTGGTGAATGGACTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCTCTGGCCAGTATAATTaGCTCGAGGAGCACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NSCYSSGRPQTPGPVSASSGQYN*LEEHQQ Trigger: TTGCTGGTGCTCCTCGAGCAAATTATACTGGCCAGA...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCTTAAAGCCATCCATGTaGATGTCTGACAGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSCYSSGRPQTPGPVSASLKPSM*MSDRAA Trigger: TGCAGCCCTGTCAGACATCAACATGGATGGCTTTAA...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGGGCTACTTGATTGTTTaGCCCAGCAGGTCTAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPGYLIV*PSRSKL Trigger: GAGTTTAGACCTGCTGGGCAAAACAATCAAGTAGCC...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | TGTCTGACAGGGCTGCAATTGCTGAACCAAACCGAGCATTTCCAGTaGCTTCTGGCCCTTCAAGAAACTGGTGCTGATTCAAGATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTGLQLLNQTEHFQ*LLALQETGADSRCP Trigger: AGGGCATCTTGAATCAGCACCAGTTTCTTGAAGGGCCAGAAGGCACTGGAAATGCTCGGTTTGGTTCAGCAATTGCAGCCCTGTCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | TGGGTTCTTTTCCTTGGTGTACTGAGGAATGTGGATAGTCACCAATaGCATGCTCACTGGGGCACTTCCGGCTGTTACCTTGAGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVLFLGVLRNVDSHQ*HAHWGTSGCYLEGE Trigger: TTCTCCCTCAAGGTAACAGCCGGAAGTGCCCCAGTGAGCATGGCATTGGTGACTATCCACATTCCTCAGTACACCAAGGAAAAGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | GACTTTGACAGTTTCAGAATAGGCTTCGAGGGCAGGGCTAGTGCCTaGGTTTTCCAAACTGATGTCCACACGCAGATCCAAAGGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DFDSFRIGFEGRASA*VFQTDVHTQIQRVD Trigger: GTCAACCCTTTGGATCTGCGTGTGGACATCAGTTTGGAAAACCCAGGCACTAGCCCTGCCCTCGAAGCCTATTCTGAAACTGTCAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | CACGGTGAACCAACCAGTAGCCAGTTGCCTTGTGGGTTCGTAAGCTaGTGTACTGAATACCCAAACTGTTCACTTGAAGGCCCGGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HGEPTSSQLPCGFVS*CTEYPNCSLEGPEN Trigger: ATTTTCCGGGCCTTCAAGTGAACAGTTTGGGTATTCAGTACAGCAGCTTACGAACCCACAAGGCAACTGGCTACTGGTTGGTTCACCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS GCA 90 bp | CCAAGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATTGCATTaGTGGATCACAGTTTTCAGCTTCGACCCATCATGGGACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRTAMPNLSISSSLH*WITVFSFDPSWDSP Trigger: TGGCGAGTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | AGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATTGCATTGCTaGATCACAGTTTTCAGCTTCGACCCATCATGGGACTCGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RTAMPNLSISSSLHC*ITVFSFDPSWDSPS Trigger: CGATGGCGAGTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | CTTGGTGTACTGAGGAATGTGGATAGTCACCAATGCCATGCTCACTaGGGCACTTCCGGCTGTTACCTTGAGGGAGAAGATGAATTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVLRNVDSHQCHAH*GTSGCYLEGEDEFR Trigger: CCTAAATTCATCTTCTCCCTCAAGGTAACAGCCGGAAGTGCCCCAGTGAGCATGGCATTGGTGACTATCCACATTCCTCAGTACACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGACCCAAACTGTTCACTaGAAGGCCCGGAAAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSCQGSDFCCCSSLQPLPTQTVH*KARKIF Trigger: AAATATTTTCCGGGCCTTCAAGTGAACAGTTTGGGT...CGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | AACTCATGCTACAGCTCAGGGAGACCTCAGACTCCAGGTCCTGTCTCAGCTTCCCAGAACAGATCCCAGTaGCATAATACTGATTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NSCYSSGRPQTPGPVSASQNRSQ*HNTDFH Trigger: GTGGAAATCAGTATTATGCAACTGGGATCTGTTCTG...GGAAGCTGAGACAGGACCTGGAGTCTGAGGTCTCCCTGAGCTGTAGCATGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCAAGGTAGTGATTTCTGCTGCTGCTCCAGCTTACAACCCCTCCCGAGCTTTCCCTCTTCTTTCTaGAGGTCGTTCATGTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCQGSDFCCCSSLQPLPSFPSSF*RSFMYV Trigger: TACATACATGAACGACCTCAAGAAAGAAGAGGGAAA...GCTCGGGAGGGGTTGTAAGCTGGAGCAGCAGCAGAAATCACTACCTTGGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 90 bp | ACCTACCAGGAGCACGTCTGTAATGGTGTCTTTATCTACATCAACTaGGCACAGCACACTGCCAAAATAGGAGCCAATCTGGTCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TYQEHVCNGVFIYIN*AQHTAKIGANLVPS Trigger: AGAGGGGACCAGATTGGCTCCTATTTTGGCAGTGTGCTGTGCTCAGTTGATGTAGATAAAGACACCATTACAGACGTGCTCCTGGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 90 bp | GAATGTCCGTCCGCATCAAGCGTCATGTTAAACAGGATGGCTACTTaGTTGTTTTGCCCAGCAGGTCTAAACTCTGCTCTGAAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECPSASSVMLNRMAT*LFCPAGLNSALKQS Trigger: GCTCTGCTTCAGAGCAGAGTTTAGACCTGCTGGGCAAAACAATCAAGTAGCCATCCTGTTTAACATGACGCTTGATGCGGACGGACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | GATTCCCGCAATTATGCTGCCTATGATAACCCCTGTCGGTACTTCTaGTTTCTCCGTGGGTTTCATTATCATGAGGGGAATCGTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSRNYAAYDNPCRYF*FLRGFHYHEGNRDS Trigger: GCTGTCACGATTCCCCTCATGATAATGAAACCCACGGAGAAAGCAGAAGTACCGACAGGGGTTATCATAGGCAGCATAATTGCGGGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | AGGCTCCATTGGACCCAAGGATTTTCTGGGAGTACTTGGTGCGAATaGTACCCTGGTGACCATTGTAAATGTACACAGCTCCAGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLHWTQGFSGSTWCE*YPGDHCKCTQLQSS Trigger: AGAACTCTGGAGCTGTGTACATTTACAATGGTCACCAGGGTACCATTCGCACCAAGTACTCCCAGAAAATCCTTGGGTCCAATGGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | AGCTTGAGTGGATTTATTTCTGCTGTGCAGCTGATGTCGCCAGCCTaGTCTGTTTGTATCCCAGTCAGATACAGGAGTGGGTTCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGFISAVQLMSPA*SVCIPVRYRSGFFS Trigger: GGAAAAGAACCCACTCCTGTATCTGACTGGGATACAAACAGACCAGGCTGGCGACATCAGCTGCACAGCAGAAATAAATCCACTCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCGCTCTCACTGAAGGCTaGGAAATTGATGGCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAFRQGLLKSSRIALNSCALTEG*EIDGRL Trigger: CAGGCGGCCATCAATTTCCAAGCCTTCAGTGAGAGC...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCCTGACAGGGCTGCAATaGCTGAACCAAACCGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YLLLSKSWEKESVEARDGLTGLQ*LNQTEH Trigger: ATGCTCGGTTTGGTTCAGCAATTGCAGCCCTGTCAG...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCTAAAGGCTCCATaGGACCCAAGGATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFSAQHLELCVCVCVCVCLLKAP*DPRIFW Trigger: CCAGAAAATCCTTGGGTCCAATGGAGCCTTTAGGAG...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | AATACCCAAGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATTaGATTGCTGGATCACAGTTTTCAGCTTCGACCCATCATGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: NTQELLCRTSVSRHH*IAGSQFSASTHHGT Trigger: AGTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCTTGGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | GCCTTGCTTGTTAACGCTGTACAACACTATCTGGCCAGTATAATTTaGTCGAGGAGCACCAGCAACAAAATGGACACCGTCTTCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLVNAVQHYLASII*SRSTSNKMDTVFSR Trigger: TCTACTGAAGACGGTGTCCATTTTGTTGCTGGTGCTCCTCGAGCAAATTATACTGGCCAGATAGTGTTGTACAGCGTTAACAAGCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | GTGTTTGTGAGGTCCCCACCATGTTGGCGCGTCTCAGATGTGGCCTaGACCATATCCTCTTTGGTTTCGAAATCGTTCAAGTTAAATATA | + |
|
Preference number: 5 (lower is better) Translates to: VFVRSPPCWRVSDVA*TISSLVSKSFKLNI Trigger: TATATTTAACTTGAACGATTTCGAAACCAAAGAGGATATGGTCCAGGCCACATCTGAGACGCGCCAACATGGTGGGGACCTCACAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 90 bp | AACAAAGCTTCTATGGCCACGTCAGCAATGCTTTGTGACCAGAGTTaGATCACTTGCCCCAAAGCACCAATGGATACATCAGTGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NKASMATSAMLCDQS*ITCPKAPMDTSVME Trigger: TTCCATCACTGATGTATCCATTGGTGCTTTGGGGCAAGTGATTCAACTCTGGTCACAAAGCATTGCTGACGTGGCCATAGAAGCTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | GGTCAAGAACTGAAAGTCTGGACTAACATCAGAACAGATCCCAGTTaGATAATACTGATTTCCACACTGATGTGCCCAGAGAGGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GQELKVWTNIRTDPS*IILISTLMCPERTT Trigger: TGTGGTCCTCTCTGGGCACATCAGTGTGGAAATCAGTATTATGCAACTGGGATCTGTTCTGATGTTAGTCCAGACTTTCAGTTCTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS GCA 90 bp | ACATCAGAGGGCTTCTGTATGCTAATGTGGTGCTCAGAACACTTCTaGACTTCGTTTACCACCATATTCTTCTGCAAGAATCGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TSEGFCMLMWCSEHF*TSFTTIFFCKNRSL Trigger: CAGTGAGCGATTCTTGCAGAAGAATATGGTGGTAAACGAAGTGCAGAAGTGTTCTGAGCACCACATTAGCATACAGAAGCCCTCTGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | TCCAAAGGGTTGACAACATCAGAGGGCTTCTGTATGCTAATGTGGTaGTCAGAACACTTCTGCACTTCGTTTACCACCATATTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKGLTTSEGFCMLMW*SEHFCTSFTTIFFC Trigger: GCAGAAGAATATGGTGGTAAACGAAGTGCAGAAGTGTTCTGAGCACCACATTAGCATACAGAAGCCCTCTGATGTTGTCAACCCTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | GTGATGTTACTGCAGGAAGTGGTTCTGCAGTCCAATTCTTTCGTATaGCGGAAGTTTTCATTCTTGAAAGATACAGAAGGGGCGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VMLLQEVVLQSNSFV*RKFSFLKDTEGAVC Trigger: ACACACCGCCCCTTCTGTATCTTTCAAGAATGAAAACTTCCGGCATACGAAAGAATTGGACTGCAGAACCACTTCCTGCAGTAACATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCAACCTGGTCAAAGGCTaGTTTAGGAAAGATCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLLLSKSWEKESVEARDGNLVKG*FRKDHG Trigger: CCCGTGATCTTTCCTAAACAAGCCTTTGACCAGGTT...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTTGTTTGTTTCTaGGCTCTCACTGAAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TFSAQHLELCVCVCVCVCCFVCF*ALTEGL Trigger: CAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCA...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCGCGGTGTGTGGTAGCTaGAGTGGATTTATTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLLLSKSWEKESVEARDGAVCGS*SGFISA Trigger: AGCAGAAATAAATCCACTCAAGCTACCACACACCGC...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | TTCGGCATCATACAGGAGAGGAATCGTGAGACTGACCGAATTGTCTaGTTTGTTTGTTTCTTGGCTCTCACTGAAGGCTTGGAAATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FGIIQERNRETDRIV*FVCFLALTEGLEID Trigger: ATCAATTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGACAATTCGGTCAGTCTCACGATTCCTCTCCTGTATGATGCCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 90 bp | AAAGGTCCTGTTCCAAACTCTGGTTGTCACATTGATGAAGTACTCTaGTTTCATGTGAAGGTCTTTCAGCCAGCAGGTGATGTTACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KGPVPNSGCHIDEVL*FHVKVFQPAGDVTA Trigger: TGCAGTAACATCACCTGCTGGCTGAAAGACCTTCACATGAAAGCAGAGTACTTCATCAATGTGACAACCAGAGTTTGGAACAGGACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 90 bp | CCTCTTGTTTTGGTTACTGACAATAAAGGATTGAGTTTGAATGGCTaGCAGCTGTTGGACATCCAGGATCAGGTCAGAGATGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLVLVTDNKGLSLNG*QLLDIQDQVRDANS Trigger: GGAATTTGCATCTCTGACCTGATCCTGGATGTCCAACAGCTGCCAGCCATTCAAACTCAATCCTTTATTGTCAGTAACCAAAACAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCGCCAGGACCACAGTGTaGTATGCACTTTCCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EILVRFSHVGFSYVSGIIARTTV*YALSPL Trigger: CAGAGGGGAAAGTGCATACAACACTGTGGTCCTGGC...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTAGTGAGATTTTCACATGTCGGGTTCAGCTATGTATCAGGAATAATCCTGAAGGCTTGGAAATaGATGGCCGCCTGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EILVRFSHVGFSYVSGIILKAWK*MAAWFW Trigger: CCAGAACCAGGCGGCCATCAATTTCCAAGCCTTCAG...GATTATTCCTGATACATAGCTGAACCCGACATGTGAAAATCTCACTAAGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTATTGTCAAAATCATGGGAGAAGGAGTCAGTAGAGGCCAGGGATGGCCTTCCGGCTGTTACCTaGAGGGAGAAGATGAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: YLLLSKSWEKESVEARDGLPAVT*REKMNL Trigger: TAAATTCATCTTCTCCCTCAAGGTAACAGCCGGAAG...GCCATCCCTGGCCTCTACTGACTCCTTCTCCCATGATTTTGACAATAACAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 90 bp | TCACTGAAGGCTTGGAAATTGATGGCCGCCTGGTTCTGGAGGTTTTaGAGATTAAAGTCGAAGTTAATGGTAAAAGTCACCTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLKAWKLMAAWFWRF*RLKSKLMVKVTCCS Trigger: TGAACAGCAGGTGACTTTTACCATTAACTTCGACTTTAATCTTCAAAACCTCCAGAACCAGGCGGCCATCAATTTCCAAGCCTTCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TATATGATGTCTTTGGTCTTTCTACCCCTAACCACACCACCCACAATTTTACCAGCTTCGTCGGCCACATaGAAAAAGTATCTCTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YMMSLVFLPLTTPPTILPASSAT*KKYLSV Trigger: AACCGAGAGATACTTTTTCAATGTGGCCGACGAAGC...TGGTAAAATTGTGGGTGGTGTGGTTAGGGGTAGAAAGACCAAAGACATCATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGAGCAAAGTGATTTaGTCTGGAGTGAACAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFSAQHLELCVCVCVCVCLSKVI*SGVNKA Trigger: AGCTTTGTTCACTCCAGACAAAATCACTTTGCTCAA...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTCAGCTCAACACCTGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTTAGCATCCTTGTaGAGCAAAGTGATTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFSAQHLELCVCVCVCVCILASL*SKVILS Trigger: AGACAAAATCACTTTGCTCAACAAGGATGCTAAGAT...ACACACACACACACACACACACACACACAATTCCAGGTGTTGAGCTGAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCCTGGTTCTGGAGGTTTaGAAGATTAAAGTCGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FAFRQGLLKSSRIALNSCLVLEV*KIKVEV Trigger: AACTTCGACTTTAATCTTCAAAACCTCCAGAACCAG...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTTAGACAGGGTCTCCTTAAATCCTCCAGGATAGCCTTGAACTCATGCGTTATCTTAGCATCCTaGTTGAGCAAAGTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FAFRQGLLKSSRIALNSCVILAS*LSKVIL Trigger: CAAAATCACTTTGCTCAACAAGGATGCTAAGATAAC...GCATGAGTTCAAGGCTATCCTGGAGGATTTAAGGAGACCCTGTCTAAAAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 90 bp | CTTTACCAAAAAGTTCTTTACTGCTTCCCAAGGATAAATACTGTTTaGTTCATCACATACAACTACAACATCCACGAGGGAAGGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYQKVLYCFPRINTV*FITYNYNIHEGRAS Trigger: GCTTGCCCTTCCCTCGTGGATGTTGTAGTTGTATGTGATGAATCAAACAGTATTTATCCTTGGGAAGCAGTAAAGAACTTTTTGGTAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAGCTTACAACCCCTCCCGAGCCTTTCCATTTATGTATTATTTTTATATTTCTTATATTGTCTTTaGAAGAAGCCGAGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLQPLPSLSIYVLFLYFLYCL*KKPSFH Trigger: GTGGAAGCTCGGCTTCTTCAAAAGACAATATAAGAA...ATATAAAAATAATACATAAATGGAAAGGCTCGGGAGGGGTTGTAAGCTGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 72 bp | CACAGGTTAGAAAGCCTCCGGTCCCCGGATTCCTGGTaGGGGTCAATCCCAGGCTCATGTTGGTCTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: HRLESLRSPDSW*GSIPGSCWSLS Trigger: AGATAAAGACCAACATGAGCCTGGGATTGACCCTCACCAGGAATCCGGGGACCGGAGGCTTTCTAACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS GCA 72 bp | GGGTTATGTGTATCGATCTCTGCCGCTGCTGTCAGCTaGACAGTCTGGAAAGTCGAAGCAGCAAAGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLCVSISAAAVS*TVWKVEAAKVL Trigger: CAGGACCTTTGCTGCTTCGACTTTCCAGACTGTGCAGCTGACAGCAGCGGCAGAGATCGATACACATAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | GGGAAGCCACTCCACGGTGAACCAACCAGTAGCCAGTaGCCTTGTGGGTTCGTAAGCTGCTGTACTGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: GKPLHGEPTSSQ*PCGFVSCCTEY Trigger: GTATTCAGTACAGCAGCTTACGAACCCACAAGGCAACTGGCTACTGGTTGGTTCACCGTGGAGTGGCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS CAA 90 bp | CGGTTCTCAGGGAAGCCACTCCACGGTGAACCAACCAGTAGCCAGTaGCCTTGTGGGTTCGTAAGCTGCTGTACTGAATACCCAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: RFSGKPLHGEPTSSQ*PCGFVSCCTEYPNC Trigger: ACAGTTTGGGTATTCAGTACAGCAGCTTACGAACCCACAAGGCAACTGGCTACTGGTTGGTTCACCGTGGAGTGGCTTCCCTGAGAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS TCA 72 bp | GACTTTTGTAGCACCCGGGCGCCCGCCAGAAGTCTGTaGATAAGCGTAGTCTCTTGCGAATTCGATAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DFCSTRAPARSL*ISVVSCEFDSS Trigger: AGAGCTATCGAATTCGCAAGAGACTACGCTTATTCACAGACTTCTGGCGGGCGCCCGGGTGCTACAAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | AGGTCCCCACCATGTTGGCGCGTCTCAGATGTGGCCTaGACCATATCCTCTTTGGTTTCGAAATCGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSPPCWRVSDVA*TISSLVSKSFK Trigger: CTTGAACGATTTCGAAACCAAAGAGGATATGGTCCAGGCCACATCTGAGACGCGCCAACATGGTGGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | CCTCCGGTCCCCGGATTCCTGGTGAGGGTCAATCCCAGGCTCATGTaGGTCTTTATCTCGGTAACATTTGAGATGCTTGCTGAATTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPVPGFLVRVNPRLM*VFISVTFEMLAEFC Trigger: GCAAAATTCAGCAAGCATCTCAAATGTTACCGAGATAAAGACCAACATGAGCCTGGGATTGACCCTCACCAGGAATCCGGGGACCGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS CAA 90 bp | CCCAAGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATTGCATaGCTGGATCACAGTTTTCAGCTTCGACCCATCATGGGACTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PKNCYAEPQYLVIIA*LDHSFQLRPIMGLA Trigger: GGCGAGTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | TCCAGGGACCTTCCAAAGAACTGGAGATGTCTCCTAAAGGCTCCATaGGACCCAAGGATTTTCTGGGAGTACTTGGTGCGAATGGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: SRDLPKNWRCLLKAP*DPRIFWEYLVRMVP Trigger: GGGTACCATTCGCACCAAGTACTCCCAGAAAATCCTTGGGTCCAATGGAGCCTTTAGGAGACATCTCCAGTTCTTTGGAAGGTCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | GGGCTGCAATTGCTGAACCAAACCGAGCATTTCCAGTaGCTTCTGGCCCTTCAAGAAACTGGTGCTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLQLLNQTEHFQ*LLALQETGADS Trigger: TGAATCAGCACCAGTTTCTTGAAGGGCCAGAAGGCACTGGAAATGCTCGGTTTGGTTCAGCAATTGCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | TTCCTTGGTGTACTGAGGAATGTGGATAGTCACCAATaGCATGCTCACTGGGGCACTTCCGGCTGTTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLGVLRNVDSHQ*HAHWGTSGCYL Trigger: AAGGTAACAGCCGGAAGTGCCCCAGTGAGCATGGCATTGGTGACTATCCACATTCCTCAGTACACCAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | AGTTTCAGAATAGGCTTCGAGGGCAGGGCTAGTGCCTaGGTTTTCCAAACTGATGTCCACACGCAGATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SFRIGFEGRASA*VFQTDVHTQIQ Trigger: TTGGATCTGCGTGTGGACATCAGTTTGGAAAACCCAGGCACTAGCCCTGCCCTCGAAGCCTATTCTGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | GGATTTATTTCTGCTGTGCAGCTGATGTCGCCAGCCTaGTCTGTTTGTATCCCAGTCAGATACAGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GFISAVQLMSPA*SVCIPVRYRSG Trigger: CCCACTCCTGTATCTGACTGGGATACAAACAGACCAGGCTGGCGACATCAGCTGCACAGCAGAAATAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | TTCTGCTGTGCAGCTGATGTCGCCAGCCTGGTCTGTTaGTATCCCAGTCAGATACAGGAGTGGGTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FCCAADVASLVC*YPSQIQEWVLF Trigger: GAAAAGAACCCACTCCTGTATCTGACTGGGATACAAACAGACCAGGCTGGCGACATCAGCTGCACAGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | CTGGCAGCTGTTGGACATCCAGGATCAGGTCAGAGATaGAAATTCCATCGCTGCCACACTCCTTATAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAAVGHPGSGQR*KFHRCHTPYRK Trigger: CTTTCTATAAGGAGTGTGGCAGCGATGGAATTTGCATCTCTGACCTGATCCTGGATGTCCAACAGCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | CCAGCCTTCTCCAGAAGAGCCGCTTCGTCGGCCACATaGAAAAAGTATCTCTCGGTTGGAGTACTAGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: PAFSRRAASSAT*KKYLSVGVLAI Trigger: AATTGCTAGTACTCCAACCGAGAGATACTTTTTCAATGTGGCCGACGAAGCGGCTCTTCTGGAGAAGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | GTCCCCTCTGTGAGACTGAATCACGGTCACATTGCCTaGCTTGTTAACGCTGTACAACACTATCTGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPSVRLNHGHIA*LVNAVQHYLAS Trigger: ACTGGCCAGATAGTGTTGTACAGCGTTAACAAGCAAGGCAATGTGACCGTGATTCAGTCTCACAGAGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | GTGCCTGGGTTTTCCAAACTGATGTCCACACGCAGATCCAAAGGGTaGACAACATCAGAGGGCTTCTGTATGCTAATGTGGTGCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPGFSKLMSTRRSKG*TTSEGFCMLMWCSE Trigger: TTCTGAGCACCACATTAGCATACAGAAGCCCTCTGATGTTGTCAACCCTTTGGATCTGCGTGTGGACATCAGTTTGGAAAACCCAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | GCTATGCCGAACCTCAGTATCTCGTCATCATTGCATTaGTGGATCACAGTTTTCAGCTTCGACCCATCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AMPNLSISSSLH*WITVFSFDPSW Trigger: CCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | TGGTGTCTTTATCTACATCAACTGAGCACAGCACACTaGCAAAATAGGAGCCAATCTGGTCCCCTCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WCLYLHQLSTAH*QNRSQSGPLCE Trigger: CTCACAGAGGGGACCAGATTGGCTCCTATTTTGGCAGTGTGCTGTGCTCAGTTGATGTAGATAAAGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | TGCTTGCTGAATTTTGCAGATTCAGCTTTTCACAGGTaGCAGTGGGTAGGTCCACAGGGCACTTGTACACAT | + |
|
Preference number: 6 (lower is better) Translates to: CLLNFADSAFHR*QWVGPQGTCTH Trigger: ATGTGTACAAGTGCCCTGTGGACCTACCCACTGCCACCTGTGAAAAGCTGAATCTGCAAAATTCAGCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
||
| CDS CCA 72 bp | ATGCCGAACCTCAGTATCTCGTCATCATTGCATTGCTaGATCACAGTTTTCAGCTTCGACCCATCATGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MPNLSISSSLHC*ITVFSFDPSWD Trigger: GTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | TGGACCCAAGGATTTTCTGGGAGTACTTGGTGCGAATaGTACCCTGGTGACCATTGTAAATGTACACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WTQGFSGSTWCE*YPGDHCKCTQL Trigger: GAGCTGTGTACATTTACAATGGTCACCAGGGTACCATTCGCACCAAGTACTCCCAGAAAATCCTTGGGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | AGGCTCCATTGGACCCAAGGATTTTCTGGGAGTACTTaGTGCGAATGGTACCCTGGTGACCATTGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: RLHWTQGFSGST*CEWYPGDHCKC Trigger: ACATTTACAATGGTCACCAGGGTACCATTCGCACCAAGTACTCCCAGAAAATCCTTGGGTCCAATGGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | GGGTTGACAACATCAGAGGGCTTCTGTATGCTAATGTaGTGCTCAGAACACTTCTGCACTTCGTTTACCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLTTSEGFCMLM*CSEHFCTSFTT Trigger: GGTGGTAAACGAAGTGCAGAAGTGTTCTGAGCACCACATTAGCATACAGAAGCCCTCTGATGTTGTCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CCA 72 bp | GTGAGACTGACCGAATTGTCTGCTTTGTTTGTTTCTTaGCTCTCACTGAAGGCTTGGAAATTGATGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRLTELSALFVS*LSLKAWKLMAA Trigger: GGCGGCCATCAATTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGACAATTCGGTCAGTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | CTTCCAAAGAACTGGAGATGTCTCCTAAAGGCTCCATaGGACCCAAGGATTTTCTGGGAGTACTTGGTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPKNWRCLLKAP*DPRIFWEYLVR Trigger: TCGCACCAAGTACTCCCAGAAAATCCTTGGGTCCAATGGAGCCTTTAGGAGACATCTCCAGTTCTTTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 72 bp | GTCTGCTTTGTTTGTTTCTTGGCTCTCACTGAAGGCTaGGAAATTGATGGCCGCCTGGTTCTGGAGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCFVCFLALTEG*EIDGRLVLEVL Trigger: CAAAACCTCCAGAACCAGGCGGCCATCAATTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | GCCAATCTGGTCCCCTCTGTGAGACTGAATCACGGTCACATTGCCTaGCTTGTTAACGCTGTACAACACTATCTGGCCAGTATAATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ANLVPSVRLNHGHIA*LVNAVQHYLASIIC Trigger: GCAAATTATACTGGCCAGATAGTGTTGTACAGCGTTAACAAGCAAGGCAATGTGACCGTGATTCAGTCTCACAGAGGGGACCAGATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | ATAGTCACCAATGCCATGCTCACTGGGGCACTTCCGGCTGTTACCTaGAGGGAGAAGATGAATTTAGGACCAATATCTTCGACACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IVTNAMLTGALPAVT*REKMNLGPISSTLL Trigger: CAAGAGTGTCGAAGATATTGGTCCTAAATTCATCTTCTCCCTCAAGGTAACAGCCGGAAGTGCCCCAGTGAGCATGGCATTGGTGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | TGGATTTATTTCTGCTGTGCAGCTGATGTCGCCAGCCTGGTCTGTTaGTATCCCAGTCAGATACAGGAGTGGGTTCTTTTCCTTGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WIYFCCAADVASLVC*YPSQIQEWVLFLGV Trigger: TACACCAAGGAAAAGAACCCACTCCTGTATCTGACTGGGATACAAACAGACCAGGCTGGCGACATCAGCTGCACAGCAGAAATAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | AAGTTTTCATTCTTGAAAGATACAGAAGGGGCGGTGTGTGGTAGCTaGAGTGGATTTATTTCTGCTGTGCAGCTGATGTCGCCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KFSFLKDTEGAVCGS*SGFISAVQLMSPAW Trigger: CCAGGCTGGCGACATCAGCTGCACAGCAGAAATAAATCCACTCAAGCTACCACACACCGCCCCTTCTGTATCTTTCAAGAATGAAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | AAATACCCAAGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATaGCATTGCTGGATCACAGTTTTCAGCTTCGACCCATCATGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KYPRTAMPNLSISSS*HCWITVFSFDPSWD Trigger: GTCCCATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCTTGGGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | CCTAGAGTTCCAGCCTTCTCCAGAAGAGCCGCTTCGTCGGCCACATaGAAAAAGTATCTCTCGGTTGGAGTACTAGCAATTGCTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: PRVPAFSRRAASSAT*KKYLSVGVLAIAFI Trigger: AATAAAAGCAATTGCTAGTACTCCAACCGAGAGATACTTTTTCAATGTGGCCGACGAAGCGGCTCTTCTGGAGAAGGCTGGAACTCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS CAA 90 bp | GCATCATACAGGAGAGGAATCGTGAGACTGACCGAATTGTCTGCTTaGTTTGTTTCTTGGCTCTCACTGAAGGCTTGGAAATTGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASYRRGIVRLTELSA*FVSWLSLKAWKLMA Trigger: GGCCATCAATTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGACAATTCGGTCAGTCTCACGATTCCTCTCCTGTATGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 72 bp | TCTATGGCCACGTCAGCAATGCTTTGTGACCAGAGTTaGATCACTTGCCCCAAAGCACCAATGGATACATCA | + |
|
Preference number: 6 (lower is better) Translates to: SMATSAMLCDQS*ITCPKAPMDTS Trigger: TGATGTATCCATTGGTGCTTTGGGGCAAGTGATTCAACTCTGGTCACAAAGCATTGCTGACGTGGCCATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS TCA 72 bp | ACTCTGCTTTCATGTGAAGGTCTTTCAGCCAGCAGGTaGTGTTACTGCAGGAAGTGGTTCTGCAGTCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: TLLSCEGLSASR*CYCRKWFCSPI Trigger: AATTGGACTGCAGAACCACTTCCTGCAGTAACATCACCTGCTGGCTGAAAGACCTTCACATGAAAGCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
||
| CDS GCA 72 bp | GAACTGCTATGCCGAACCTCAGTATCTCGTCATCATTaGATTGCTGGATCACAGTTTTCAGCTTCGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ELLCRTSVSRHH*IAGSQFSASTH Trigger: ATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS GCA 72 bp | GTTAACGCTGTACAACACTATCTGGCCAGTATAATTTaGTCGAGGAGCACCAGCAACAAAATGGACACCGTC | + |
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Preference number: 6 (lower is better) Translates to: VNAVQHYLASII*SRSTSNKMDTV Trigger: GACGGTGTCCATTTTGTTGCTGGTGCTCCTCGAGCAAATTATACTGGCCAGATAGTGTTGTACAGCGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | TGCTATGCCGAACCTCAGTATCTCGTCATCATTGCATaGCTGGATCACAGTTTTCAGCTTCGACCCATCATG | + |
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Preference number: 6 (lower is better) Translates to: CYAEPQYLVIIA*LDHSFQLRPIM Trigger: CATGATGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | AGAACTGCTATGCCGAACCTCAGTATCTCGTCATCATaGCATTGCTGGATCACAGTTTTCAGCTTCGACCCA | + |
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Preference number: 6 (lower is better) Translates to: RTAMPNLSISSS*HCWITVFSFDP Trigger: TGGGTCGAAGCTGAAAACTGTGATCCAGCAATGCAATGATGACGAGATACTGAGGTTCGGCATAGCAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | ACTGTGGTTTCTATCCTGCAGAACCTGGTCAAAGGCTaGTTTAGGAAAGATCACGGGCTTGTGAGATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: TVVSILQNLVKG*FRKDHGLVRCL Trigger: GAGACATCTCACAAGCCCGTGATCTTTCCTAAACAAGCCTTTGACCAGGTTCTGCAGGATAGAAACCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | GTCCGCATCAAGCGTCATGTTAAACAGGATGGCTACTaGATTGTTTTGCCCAGCAGGTCTAAACTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRIKRHVKQDGY*IVLPSRSKLCS Trigger: AGAGCAGAGTTTAGACCTGCTGGGCAAAACAATCAAGTAGCCATCCTGTTTAACATGACGCTTGATGCGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | TTCTTGAAAGATACAGAAGGGGCGGTGTGTGGTAGCTaGAGTGGATTTATTTCTGCTGTGCAGCTGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: FLKDTEGAVCGS*SGFISAVQLMS Trigger: CGACATCAGCTGCACAGCAGAAATAAATCCACTCAAGCTACCACACACCGCCCCTTCTGTATCTTTCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | AGGGTATCCCACATCACAGGTAACAGATTTCTGCGATaGACCAACCTCACATGTTACTTCTGTTCCATCGAC | + |
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Preference number: 6 (lower is better) Translates to: RVSHITGNRFLR*TNLTCYFCSID Trigger: GTCGATGGAACAGAAGTAACATGTGAGGTTGGTTCATCGCAGAAATCTGTTACCTGTGATGTGGGATACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | AAGGAGCGTTCTCATCCGAAGAGATCTCATAGAAGTTaGTGTTGGTGGATCGGGTTAAGTGAAGTTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KERSHPKRSHRS*CWWIGLSEVRH Trigger: ATGCCGAACTTCACTTAACCCGATCCACCAACATCAACTTCTATGAGATCTCTTCGGATGAGAACGCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | GGTGAACCGACAATCACATCATTAAAGCCATCCATGTaGATGTCTGACAGGGCTGCAATTGCTGAACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GEPTITSLKPSM*MSDRAAIAEPN Trigger: GTTTGGTTCAGCAATTGCAGCCCTGTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTCGGTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | TTTTCCAAACTGATGTCCACACGCAGATCCAAAGGGTaGACAACATCAGAGGGCTTCTGTATGCTAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: FSKLMSTRRSKG*TTSEGFCMLMW Trigger: CCACATTAGCATACAGAAGCCCTCTGATGTTGTCAACCCTTTGGATCTGCGTGTGGACATCAGTTTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | AGGAGAGGAATCGTGAGACTGACCGAATTGTCTGCTTaGTTTGTTTCTTGGCTCTCACTGAAGGCTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RRGIVRLTELSA*FVSWLSLKAWK Trigger: TTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGACAATTCGGTCAGTCTCACGATTCCTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | CATCAGAATATCATTTTGAGGAGCGTAATCTGCACTGAATCCAACTaGTGCCATTTCCATCTGGAAGTTGTCTCCTCCTTGAACAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: HQNIILRSVICTESN*CHFHLEVVSSLNSA Trigger: GGCACTGTTCAAGGAGGAGACAACTTCCAGATGGAAATGGCACAAGTTGGATTCAGTGCAGATTACGCTCCTCAAAATGATATTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | TTCTCTACAGGTGAACCGACAATCACATCATTAAAGCCATCCATGTaGATGTCTGACAGGGCTGCAATTGCTGAACCAAACCGAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: FSTGEPTITSLKPSM*MSDRAAIAEPNRAF Trigger: AAATGCTCGGTTTGGTTCAGCAATTGCAGCCCTGTCAGACATCAACATGGATGGCTTTAATGATGTGATTGTCGGTTCACCTGTAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | CTCACTGAAGGCTTGGAAATTGATGGCCGCCTGGTTCTGGAGGTTTaGAAGATTAAAGTCGAAGTTAATGGTAAAAGTCACCTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LTEGLEIDGRLVLEV*KIKVEVNGKSHLLF Trigger: GAACAGCAGGTGACTTTTACCATTAACTTCGACTTTAATCTTCAAAACCTCCAGAACCAGGCGGCCATCAATTTCCAAGCCTTCAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | GACCGAATTGTCTGCTTTGTTTGTTTCTTGGCTCTCACTGAAGGCTaGGAAATTGATGGCCGCCTGGTTCTGGAGGTTTTGAAGATTAAA | + |
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Preference number: 6 (lower is better) Translates to: DRIVCFVCFLALTEG*EIDGRLVLEVLKIK Trigger: TTTAATCTTCAAAACCTCCAGAACCAGGCGGCCATCAATTTCCAAGCCTTCAGTGAGAGCCAAGAAACAAACAAAGCAGACAATTCGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS GCA 72 bp | CTGAAAGTCTGGACTAACATCAGAACAGATCCCAGTTaGATAATACTGATTTCCACACTGATGTGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LKVWTNIRTDPS*IILISTLMCPE Trigger: CTCTGGGCACATCAGTGTGGAAATCAGTATTATGCAACTGGGATCTGTTCTGATGTTAGTCCAGACTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056117.10 ENSMUST00000224204.2 |
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| CDS GCA 72 bp | GTTCCAAACTCTGGTTGTCACATTGATGAAGTACTCTaGTTTCATGTGAAGGTCTTTCAGCCAGCAGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VPNSGCHIDEVL*FHVKVFQPAGD Trigger: ATCACCTGCTGGCTGAAAGACCTTCACATGAAAGCAGAGTACTTCATCAATGTGACAACCAGAGTTTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS GCA 72 bp | AATTATGCTGCCTATGATAACCCCTGTCGGTACTTCTaGTTTCTCCGTGGGTTTCATTATCATGAGGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NYAAYDNPCRYF*FLRGFHYHEGN Trigger: ATTCCCCTCATGATAATGAAACCCACGGAGAAAGCAGAAGTACCGACAGGGGTTATCATAGGCAGCATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | CAGAGCTTTAGGGTTATCTTAGCATCCTTGTTGAGCAAAGTGATTTaGTCTGGAGTGAACAAAGCTTCTATGGCCACGTCAGCAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: QSFRVILASLLSKVI*SGVNKASMATSAML Trigger: AAGCATTGCTGACGTGGCCATAGAAGCTTTGTTCACTCCAGACAAAATCACTTTGCTCAACAAGGATGCTAAGATAACCCTAAAGCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | AACTCTGCTCTGAAGCAGAGCTTTAGGGTTATCTTAGCATCCTTGTaGAGCAAAGTGATTTTGTCTGGAGTGAACAAAGCTTCTATGGCC | + |
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Preference number: 6 (lower is better) Translates to: NSALKQSFRVILASL*SKVILSGVNKASMA Trigger: GGCCATAGAAGCTTTGTTCACTCCAGACAAAATCACTTTGCTCAACAAGGATGCTAAGATAACCCTAAAGCTCTGCTTCAGAGCAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | GCTTGGAAATTGATGGCCGCCTGGTTCTGGAGGTTTTaGAGATTAAAGTCGAAGTTAATGGTAAAAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: AWKLMAAWFWRF*RLKSKLMVKVT Trigger: GGTGACTTTTACCATTAACTTCGACTTTAATCTTCAAAACCTCCAGAACCAGGCGGCCATCAATTTCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS GCA 72 bp | GGCTTCTGTATGCTAATGTGGTGCTCAGAACACTTCTaGACTTCGTTTACCACCATATTCTTCTGCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GFCMLMWCSEHF*TSFTTIFFCKN Trigger: ATTCTTGCAGAAGAATATGGTGGTAAACGAAGTGCAGAAGTGTTCTGAGCACCACATTAGCATACAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | TGGCGCGTCTCAGATGTGGCCTGGACCATATCCTCTTaGGTTTCGAAATCGTTCAAGTTAAATATAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: WRVSDVAWTISS*VSKSFKLNIIL Trigger: GAGAATTATATTTAACTTGAACGATTTCGAAACCAAAGAGGATATGGTCCAGGCCACATCTGAGACGCGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | GAGAAGATGAATTTAGGACCAATATCTTCGACACTCTaGATGACAGAAGGAGCGTTCTCATCCGAAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: EKMNLGPISSTL*MTEGAFSSEEI Trigger: GATCTCTTCGGATGAGAACGCTCCTTCTGTCATCAAGAGTGTCGAAGATATTGGTCCTAAATTCATCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | AATGTACACAGCTCCAGAGTTCTCATTCTCTACAGGTaGACCGACAATCACATCATTAAAGCCATCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: NVHSSRVLILYR*TDNHIIKAIHV Trigger: AACATGGATGGCTTTAATGATGTGATTGTCGGTTCACCTGTAGAGAATGAGAACTCTGGAGCTGTGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | CTGAAGCAGAGCTTTAGGGTTATCTTAGCATCCTTGTaGAGCAAAGTGATTTTGTCTGGAGTGAACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LKQSFRVILASL*SKVILSGVNKA Trigger: AGCTTTGTTCACTCCAGACAAAATCACTTTGCTCAACAAGGATGCTAAGATAACCCTAAAGCTCTGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 72 bp | GCTCTGAAGCAGAGCTTTAGGGTTATCTTAGCATCCTaGTTGAGCAAAGTGATTTTGTCTGGAGTGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: ALKQSFRVILAS*LSKVILSGVNK Trigger: TTTGTTCACTCCAGACAAAATCACTTTGCTCAACAAGGATGCTAAGATAACCCTAAAGCTCTGCTTCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | CTAAACTCTGCTCTGAAGCAGAGCTTTAGGGTTATCTTAGCATCCTaGTTGAGCAAAGTGATTTTGTCTGGAGTGAACAAAGCTTCTATG | + |
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Preference number: 6 (lower is better) Translates to: LNSALKQSFRVILAS*LSKVILSGVNKASM Trigger: CATAGAAGCTTTGTTCACTCCAGACAAAATCACTTTGCTCAACAAGGATGCTAAGATAACCCTAAAGCTCTGCTTCAGAGCAGAGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS CAA 90 bp | ACTTTACCAAAAAGTTCTTTACTGCTTCCCAAGGATAAATACTGTTaGATTCATCACATACAACTACAACATCCACGAGGGAAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TLPKSSLLLPKDKYC*IHHIQLQHPRGKGK Trigger: CTTGCCCTTCCCTCGTGGATGTTGTAGTTGTATGTGATGAATCAAACAGTATTTATCCTTGGGAAGCAGTAAAGAACTTTTTGGTAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | AAAGTTCTTTACTGCTTCCCAAGGATAAATACTGTTTaGTTCATCACATACAACTACAACATCCACGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: KVLYCFPRINTV*FITYNYNIHEG Trigger: TCCCTCGTGGATGTTGTAGTTGTATGTGATGAATCAAACAGTATTTATCCTTGGGAAGCAGTAAAGAACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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| CDS TCA 72 bp | TTCAAGTTAAATATAATTCTCGGCTCATTGGCATATTaGATTAACGCCACCTGTGTCTTTTTAGGTCCTATA | + |
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Preference number: 6 (lower is better) Translates to: FKLNIILGSLAY*INATCVFLGPI Trigger: TATAGGACCTAAAAAGACACAGGTGGCGTTAATTCAATATGCCAATGAGCCGAGAATTATATTTAACTTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056117.10 |
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