Pregenerated sensors for ITGA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042284Ensembl transcript IDs: ENSMUST00000061673.9
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACATCCCTGCATGTTTCCTGCAGCCAGGACCTGCTGCTTCCTGAGTaGGGGCAGCTGGCTTCTCAGATCCAAAGGCTGACCACCAGGATC | + |
Preference number: 1 (lower is better) Translates to: TSLHVSCSQDLLLPE*GQLASQIQRLTTRI Trigger: GATCCTGGTGGTCAGCCTTTGGATCTGAGAAGCCAGCTGCCCTCACTCAGGAAGCAGCAGGTCCTGGCTGCAGGAAACATGCAGGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 90 bp | CAGAACATCCCTGCATGTTTCCTGCAGCCAGGACCTGCTGCTTCCTaGGTGAGGGCAGCTGGCTTCTCAGATCCAAAGGCTGACCACCAG | + |
Preference number: 1 (lower is better) Translates to: QNIPACFLQPGPAAS*VRAAGFSDPKADHQ Trigger: CTGGTGGTCAGCCTTTGGATCTGAGAAGCCAGCTGCCCTCACTCAGGAAGCAGCAGGTCCTGGCTGCAGGAAACATGCAGGGATGTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | GCATGGGACAACCCTGCTGAGGAAGCCCCAGATCAAAGCATCTCCTaGTGGAAGAAGGGAGGAGGGCTGCAAACAGACTCTGGTCCCTGT | + |
Preference number: 1 (lower is better) Translates to: AWDNPAEEAPDQSIS*WKKGGGLQTDSGPC Trigger: ACAGGGACCAGAGTCTGTTTGCAGCCCTCCTCCCTTCTTCCACCAGGAGATGCTTTGATCTGGGGCTTCCTCAGCAGGGTTGTCCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | TGGGACAACCCTGCTGAGGAAGCCCCAGATCAAAGCATCTCCTGGTaGAAGAAGGGAGGAGGGCTGCAAACAGACTCTGGTCCCTGTCAT | + |
Preference number: 1 (lower is better) Translates to: WDNPAEEAPDQSISW*KKGGGLQTDSGPCH Trigger: ATGACAGGGACCAGAGTCTGTTTGCAGCCCTCCTCCCTTCTTCCACCAGGAGATGCTTTGATCTGGGGCTTCCTCAGCAGGGTTGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | AGGGGTCCTGTATTCCCTAGGTCAGATGAGTTAGGGCTCCAGGGTTaGGACATGCCTGACTCACCAAGCTACTCTGTATCTTCCTCAAGG | + |
Preference number: 1 (lower is better) Translates to: RGPVFPRSDELGLQG*DMPDSPSYSVSSSR Trigger: CCTTGAGGAAGATACAGAGTAGCTTGGTGAGTCAGGCATGTCCCAACCCTGGAGCCCTAACTCATCTGACCTAGGGAATACAGGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | TTCTGGATACTGACAGGTCTTACAGTGGGCAATCAAGTGGAGAGGTaGGTTTGGGGCAGGAGGATCAGCACATTTTACAGCAGTAGTTCA | + |
Preference number: 1 (lower is better) Translates to: FWILTGLTVGNQVER*VWGRRISTFYSSSS Trigger: TGAACTACTGCTGTAAAATGTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGACCTGTCAGTATCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | ATTTTCCCTCAGGCCACTTTCAGGCCTATGAGTTGGGTAAGGAAGTaGAACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 1 (lower is better) Translates to: IFPQATFRPMSWVRK*NSVCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACACACTGTTCCACTTCCTTACCCAACTCATAGGCCTGAAAGTGGCCTGAGGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 90 bp | TTCCTTTCAGTACAGAATGAATGGGTAGTGGTGGTTTCTGGATTCTaGGTAGATGGAGCTGTGGGGGCCACTGTCCAATTGGAAGTTGGA | + |
Preference number: 1 (lower is better) Translates to: FLSVQNEWVVVVSGF*VDGAVGATVQLEVG Trigger: TCCAACTTCCAATTGGACAGTGGCCCCCACAGCTCCATCTACTCAGAATCCAGAAACCACCACTACCCATTCATTCTGTACTGAAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | TCATGTTACATTGAATCTACGTGTGATGGCTTCCCTTGCTGTGGTTaGTCTAAGGAGGAAGAGAAGAACAATACTCCTGTCCCCTCTCCT | + |
Preference number: 1 (lower is better) Translates to: SCYIESTCDGFPCCG*SKEEEKNNTPVPSP Trigger: AGGAGAGGGGACAGGAGTATTGTTCTTCTCTTCCTCCTTAGAGCAACCACAGCAAGGGAAGCCATCACACGTAGATTCAATGTAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | GGTGGTATGTTCGGTAGAGAAGTTGCTATGGAAAAACACAGTCCTTaGCAACCAATGGCTGCCATTCAGTGTGTTAACTGTGGACCTACT | + |
Preference number: 1 (lower is better) Translates to: GGMFGREVAMEKHSP*QPMAAIQCVNCGPT Trigger: AGTAGGTCCACAGTTAACACACTGAATGGCAGCCATTGGTTGCCAAGGACTGTGTTTTTCCATAGCAACTTCTCTACCGAACATACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | GAGAACAGTCACCCAAGTGGTTGTAAACGTCTTCAGGAAGGATGCTaGATCTCAGAAGTACAATATACTACACACCAACCCTTTGGAGTG | + |
Preference number: 1 (lower is better) Translates to: ENSHPSGCKRLQEGC*ISEVQYTTHQPFGV Trigger: CACTCCAAAGGGTTGGTGTGTAGTATATTGTACTTCTGAGATGCAGCATCCTTCCTGAAGACGTTTACAACCACTTGGGTGACTGTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | ACAGAGAACAGTCACCCAAGTGGTTGTAAACGTCTTCAGGAAGGATaGTGCATCTCAGAAGTACAATATACTACACACCAACCCTTTGGA | + |
Preference number: 1 (lower is better) Translates to: TENSHPSGCKRLQEG*CISEVQYTTHQPFG Trigger: TCCAAAGGGTTGGTGTGTAGTATATTGTACTTCTGAGATGCAGCATCCTTCCTGAAGACGTTTACAACCACTTGGGTGACTGTTCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | ACAAAGAAAATATTTAGGGTCTACATTGCCCATGATCCTAGTGCCTaGGAGCCTAGCCTGTCCTTCTGGTATTTGGGTTCATTTCCTTGT | + |
Preference number: 1 (lower is better) Translates to: TKKIFRVYIAHDPSA*EPSLSFWYLGSFPC Trigger: ACAAGGAAATGAACCCAAATACCAGAAGGACAGGCTAGGCTCCCAGGCACTAGGATCATGGGCAATGTAGACCCTAAATATTTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | CTTAAGTTATCATGTTACATTGAATCTACGTGTGATGGCTTCCCTTaGTGTGGTTGCTCTAAGGAGGAAGAGAAGAACAATACTCCTGTC | + |
Preference number: 1 (lower is better) Translates to: LKLSCYIESTCDGFP*CGCSKEEEKNNTPV Trigger: GACAGGAGTATTGTTCTTCTCTTCCTCCTTAGAGCAACCACAGCAAGGGAAGCCATCACACGTAGATTCAATGTAACATGATAACTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | ATACAAAAATATCAAACCTTTGACCTCAGGACAGTGTGCAGGATATaGCGTACACAGCGCATTCAAAAGACTCTTTCACACACTCAGCTA | + |
Preference number: 1 (lower is better) Translates to: IQKYQTFDLRTVCRI*RTQRIQKTLSHTQL Trigger: TAGCTGAGTGTGTGAAAGAGTCTTTTGAATGCGCTGTGTACGCCATATCCTGCACACTGTCCTGAGGTCAAAGGTTTGATATTTTTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 90 bp | TGGGTGTACAAGATAAGAAGGAATTATACAAAAATATCAAACCTTTaGCCTCAGGACAGTGTGCAGGATATGGCGTACACAGCGCATTCA | + |
Preference number: 1 (lower is better) Translates to: WVYKIRRNYTKISNL*PQDSVQDMAYTAHS Trigger: TGAATGCGCTGTGTACGCCATATCCTGCACACTGTCCTGAGGTCAAAGGTTTGATATTTTTGTATAATTCCTTCTTATCTTGTACACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | CTTAGCCATTATATTCAGTACAAGTTGAAGTTTGATTGTAGCGTGTaGTCACGCGTGTTAACAGACTCTAAACACTGGTCTGCATCTCTA | + |
Preference number: 1 (lower is better) Translates to: LSHYIQYKLKFDCSV*SRVLTDSKHWSASL Trigger: TAGAGATGCAGACCAGTGTTTAGAGTCTGTTAACACGCGTGAGCACACGCTACAATCAAACTTCAACTTGTACTGAATATAATGGCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 90 bp | GAAGGAATTATACAAAAATATCAAACCTTTGACCTCAGGACAGTGTaGAGGATATGGCGTACACAGCGCATTCAAAAGACTCTTTCACAC | + |
Preference number: 1 (lower is better) Translates to: EGIIQKYQTFDLRTV*RIWRTQRIQKTLSH Trigger: GTGTGAAAGAGTCTTTTGAATGCGCTGTGTACGCCATATCCTGCACACTGTCCTGAGGTCAAAGGTTTGATATTTTTGTATAATTCCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 90 bp | TTCTACATAGAATTTAAGCTCAACTGCACTATTTTCCAATCACACTaGAAAATACTCTTTCCACCTTATGGGATCCACAAGGTCACCGAG | + |
Preference number: 1 (lower is better) Translates to: FYIEFKLNCTIFQSH*KILFPPYGIHKVTE Trigger: CTCGGTGACCTTGTGGATCCCATAAGGTGGAAAGAGTATTTTCCAGTGTGATTGGAAAATAGTGCAGTTGAGCTTAAATTCTATGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 90 bp | GCTACTCTGTATCTTCCTCAAGGTTTGTGGTTAAATCTCTTACTCTaGACTTCTACATTCAAGTGCAGTTTTAATACGAAGATGAAAGAC | + |
Preference number: 1 (lower is better) Translates to: ATLYLPQGLWLNLLL*TSTFKCSFNTKMKD Trigger: GTCTTTCATCTTCGTATTAAAACTGCACTTGAATGTAGAAGTTCAGAGTAAGAGATTTAACCACAAACCTTGAGGAAGATACAGAGTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | GGCATGGAGCTAGGAGTGGGGCTGCTGGGCAGGTATGTACTGGAGTaGGGCAGCATGGTAACTGAGCAAGAATCACCCGAGTTCTGTTGG | + |
Preference number: 2 (lower is better) Translates to: GMELGVGLLGRYVLE*GSMVTEQESPEFCW Trigger: CCAACAGAACTCGGGTGATTCTTGCTCAGTTACCATGCTGCCCAACTCCAGTACATACCTGCCCAGCAGCCCCACTCCTAGCTCCATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATCTGAGCCTGGGACATaGGACAGGTCTGGGCCTGGG | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALESEPGT*DRSGPG Trigger: CCCAGGCCCAGACCTGTCTCATGTCCCAGGCTCAGA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATGGGGGAAGAGTGCTTaGGAGGTCTGGGCAATGAAT | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEWGKSA*EVWAMN Trigger: ATTCATTGCCCAGACCTCCCAAGCACTCTTCCCCCA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACTCATGGGGTGGGGGTaGAGTTTGCAGTATGCAAGC | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGLMGWG*SLQYAS Trigger: GCTTGCATACTGCAAACTCCACCCCCACCCCATGAG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGGAAGTCTTGTCTCATaGGGTGGGGGTGGAGTTTGC | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGGSLVS*GGGGVC Trigger: GCAAACTCCACCCCCACCCCATGAGACAAGACTTCC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | TCTGCACTCAGCCACTGGGCTACACCCAGCCTTGCATGTGGCCTTTaGCAATGGGCTCTGACTTTCCTTTCAGTACAGAATGAATGGGTA | + |
Preference number: 2 (lower is better) Translates to: SALSHWATPSLACGL*QWALTFLSVQNEWV Trigger: TACCCATTCATTCTGTACTGAAAGGAAAGTCAGAGCCCATTGCAAAAGGCCACATGCAAGGCTGGGTGTAGCCCAGTGGCTGAGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGTGGTTTCTGGATTCTaGGTAGATGGAGCTGTGGGG | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGVVSGF*VDGAVG Trigger: CCCCACAGCTCCATCTACTCAGAATCCAGAAACCAC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGGTGGAGAGGTGGGTTTaGGGCAGGAGGATCAGCACA | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLVERWV*GRRIST Trigger: TGTGCTGATCCTCCTGCCCCAAACCCACCTCTCCAC...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAAATCAAGTGGAGAGGTaGGTTTGGGGCAGGAGGATC | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGNQVER*VWGRRI Trigger: GATCCTCCTGCCCCAAACCCACCTCTCCACTTGATT...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGATGGATTCTGAGTAGATaGAGCTGTGGGGGCCACTGT | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGWILSR*SCGGHC Trigger: ACAGTGGCCCCCACAGCTCCATCTACTCAGAATCCA...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACGTACATGGAGCTATGTaGCCACATCTTTGGCTATAT | + |
Preference number: 2 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHVHGAM*PHLWLY Trigger: ATATAGCCAAAGATGTGGTCACATAGCTCCATGTAC...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR GCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGGGTCTTCTTCAGTTTaGTCATCACTGTGGCAGAAC | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEGSSSV*SSLWQN Trigger: GTTCTGCCACAGTGATGAGCAAACTGAAGAAGACCC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR GCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAAAGTACATTTGGGACTaGTGTGGGTGGAACACAGGT | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEKYIWD*CGWNTG Trigger: ACCTGTGTTCCACCCACAGCAGTCCCAAATGTACTT...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGCAGTGGGCAATCAAGTaGAGAGGTGGGTTTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLQWAIK*RGGFGA Trigger: TGCCCCAAACCCACCTCTCCACTTGATTGCCCACTG...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGAGCCCAGCTCTTTCTaGATACTGACAGGTCTTACA | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEEPSSF*ILTGLT Trigger: TGTAAGACCTGTCAGTATCCAGAAAGAGCTGGGCTC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTTAGGGCTCCAGGGTTaGGACATGCCTGACTCACCA | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLLGLQG*DMPDSP Trigger: TGGTGAGTCAGGCATGTCCCAACCCTGGAGCCCTAA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGCTGCAAACAGACTCTaGTCCCTGTCATCTTCTACC | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGAANRL*SLSSST Trigger: GGTAGAAGATGACAGGGACCAGAGTCTGTTTGCAGC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR GCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAACGTCTTCAGGAAGGATaGTGCATCTCAGAAGTACAA | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALERLQEG*CISEVQ Trigger: TTGTACTTCTGAGATGCAGCATCCTTCCTGAAGACG...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATTTCTGGGTCACACTTaGTCTGTCTCTTTCCAAGTA | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEFLGHT*SVSFQV Trigger: TACTTGGAAAGAGACAGATCAAGTGTGACCCAGAAA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGTCACTCGGAAGATGTaGCCAAGGAGAGATTCTTTA | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGVTRKM*PRRDSL Trigger: TAAAGAATCTCTCCTTGGTCACATCTTCCGAGTGAC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGAAGCTGGCGAGAGAGTaGAAATGGAGCGCATCTTTC | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLKLARE*KWSASF Trigger: GAAAGATGCGCTCCATTTTCACTCTCTCGCCAGCTT...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTGTGTGTTGTGTCTCTaGGTAGCTCTGGCTCTCAAG | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLCVLCL*VALALK Trigger: CTTGAGAGCCAGAGCTACTCAGAGACACAACACACA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR GCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTGCAATGGGGGAAGAGTaGTTGGGAGGTCTGGGCAAT | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTAMGEE*LGGLGN Trigger: ATTGCCCAGACCTCCCAAGCACTCTTCCCCCATTGC...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGTAAGCAATCCTAGATaGATGATGGAGTACATGGAG | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEVSNPR*MMEYME Trigger: CTCCATGTACTCCATCATCCATCTAGGATTGCTTAC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATTTGGCCCTGCATCCTaGGAAATAAGTCAACTGTTT | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEFGPAS*EISQLF Trigger: AAACAGTTGACTTATTTCCCAGGATGCAGGGCCAAA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAACTTCCATTTGAGAAATaGTGGCATGATCAGGCTCTT | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALELPFEK*WHDQAL Trigger: AAGAGCCTGATCATGCCACCATTTCTCAAATGGAAG...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGGCAATCCTAGATGGATaGTGGAGTACATGGAGCTAT | + |
Preference number: 2 (lower is better) Translates to: LMGWGWSLQYASNNVNKQAILDG*WSTWSY Trigger: ATAGCTCCATGTACTCCATCATCCATCTAGGATTGC...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGTCATTTACAAATGCTaGGTGTCACTCGGAAGATGT | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGVIYKC*VSLGRC Trigger: ACATCTTCCGAGTGACACTCAGCATTTGTAAATGAC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR TCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTGGCTTGCTGAGTTTTaGGGAAAGCAGAGCCCAGCT | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTWLAEF*GKQSPA Trigger: AGCTGGGCTCTGCTTTCCTCAAAACTCAGCAAGCCA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR GCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAAACTGTCTTGATTTCTaGTTCCGCACTGCTCAACAA | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGNCLDF*FRTAQQ Trigger: TTGTTGAGCAGTGCGGAAGCAGAAATCAAGACAGTT...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATTTTCTCATTTGAACTaGGAGAACCTTTCACCCCAT | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEFSHLN*ENLSPH Trigger: ATGGGGTGAAAGGTTCTCCCAGTTCAAATGAGAAAA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGCAGAGTAATTTTGCCTaGCTAGGGCATGTTCCAGTC | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLQSNFA*LGHVPV Trigger: GACTGGAACATGCCCTAGCCAGGCAAAATTACTCTG...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGGAAAAACACAGTCCTTaGCAACCAATGGCTGCCATT | + |
Preference number: 2 (lower is better) Translates to: LMGWGWSLQYASNNVNKQEKHSP*QPMAAI Trigger: AATGGCAGCCATTGGTTGCCAAGGACTGTGTTTTTC...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATTTAGAACTGGCCTTTaGCTGAGGATAGAGAATGTA | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEFRTGL*LRIENV Trigger: TACATTCTCTATCCTCAGCCAAAGGCCAGTTCTAAA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGTGTGGCCTTTTGCAATaGGCTCTGACTTTCCTTTCA | + |
Preference number: 2 (lower is better) Translates to: LMGWGWSLQYASNNVNKQCGLLQ*ALTFLS Trigger: TGAAAGGAAAGTCAGAGCCCATTGCAAAAGGCCACA...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAAAGTGTTTCAGACACTaGTTTTCATATAAGGCTGGG | + |
Preference number: 2 (lower is better) Translates to: FSDPKADHQDLLCGPALEKCFRH*FSYKAG Trigger: CCCAGCCTTATATGAAAACCAGTGTCTGAAACACTT...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGGGTCTGGGCAATGAATaGGAAGTGCCTAAAATGCTA | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLGLGNE*EVPKML Trigger: TAGCATTTTAGGCACTTCTCATTCATTGCCCAGACC...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACCAATGCAGTCTTCCTaGAACCTTTATTTGAGAAGA | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGPMQSS*NLYLRR Trigger: TCTTCTCAAATAAAGGTTTCAGGAAGACTGCATTGG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAAACCCGGCAGGCAAGTaGCTTTTAACATCTTTTTAT | + |
Preference number: 2 (lower is better) Translates to: LHSSNTQQNIPACFLQPGNPAGK*LLTSFY Trigger: ATAAAAAGATGTTAAAAGCCACTTGCCTGCCGGGTT...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGACTACTCAGGAAAGGTaGCATCAGTTTTATTGGGTC | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLTTQER*HQFYWV Trigger: GACCCAATAAAACTGATGTCACCTTTCCTGAGTAGT...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGATAAGAAAAGAGACCTaGTTGTTGCTCAGTCAGAGT | + |
Preference number: 2 (lower is better) Translates to: LMGWGWSLQYASNNVNKQIRKET*LLLSQS Trigger: ACTCTGACTGAGCAACAATCAGGTCTCTTTTCTTAT...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTGGAACGTCATTTGTTTaGCCCTGCATCCTGGGAAAT | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTGTSFV*PCILGN Trigger: ATTTCCCAGGATGCAGGGCCAAACAAATGACGTTCC...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTCAGTACAGAATGAATaGGTAGTGGTGGTTTCTGGA | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLSVQNE*VVVVSG Trigger: TCCAGAAACCACCACTACCCATTCATTCTGTACTGA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTTCTTCTCACATGATTaGGGCAAACCTGAGGATAGA | + |
Preference number: 2 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLFFSHD*GKPEDR Trigger: TCTATCCTCAGGTTTGCCTCAATCATGTGAGAAGAA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTAAGTTCAAACTGTCTTaGTTTCTGCTTCCGCACTGC | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTKFKLS*FLLPHC Trigger: GCAGTGCGGAAGCAGAAATCAAGACAGTTTGAACTT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTACAGACTCTAAACACTaGTCTGCATCTCTACCCATC | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTTDSKH*SASLPI Trigger: GATGGGTAGAGATGCAGACCAGTGTTTAGAGTCTGT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTAGTTGGGTAAGGAAGTaGAACAGTGTGTGTGTGTGT | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTSWVRK*NSVCVC Trigger: ACACACACACACACTGTTCCACTTCCTTACCCAACT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | GTGGGTGTACAAGATAAGAAGGAATTATACAAAAATATCAAACCTTaGACCTCAGGACAGTGTGCAGGATATGGCGTACACAGCGCATTC | + |
Preference number: 2 (lower is better) Translates to: VGVQDKKELYKNIKP*TSGQCAGYGVHSAF Trigger: GAATGCGCTGTGTACGCCATATCCTGCACACTGTCCTGAGGTCAAAGGTTTGATATTTTTGTATAATTCCTTCTTATCTTGTACACCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR GCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGGAGATTCTTTATTTATaGTGTGCTGAGAGTAACTGC | + |
Preference number: 2 (lower is better) Translates to: LLCGPALEFRISKVFQTLEILYL*CAESNC Trigger: GCAGTTACTCTCAGCACAGCATAAATAAAGAATCTC...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTGTAGAGAAGTTGCTATaGAAAAACACAGTCCTTGGC | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTVEKLL*KNTVLG Trigger: GCCAAGGACTGTGTTTTTCCATAGCAACTTCTCTAC...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | CAGTCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTaGAACTGGGAGAACCTTTCACCCCATTCCCGTGTTGTCATTTAC | + |
Preference number: 2 (lower is better) Translates to: QSILYMSLAKESFSH*NWENLSPHSRVVIY Trigger: GTAAATGACAACACGGGAATGGGGTGAAAGGTTCTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTATAAGGACTCCATCTTaGCTGCCTATTCTACATAGA | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTIRTPS*LPILHR Trigger: TCTATGTAGAATAGGCAGTCAAGATGGAGTCCTTAT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR TCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTGTTGGAAAACCTGAATaGATGATCTGTTCAGTGAAG | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTVGKPE*MICSVK Trigger: CTTCACTGAACAGATCATTCATTCAGGTTTTCCAAC...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTGTCCTTCTGGTATTTaGGTTCATTTCCTTGTCTTC | + |
Preference number: 2 (lower is better) Translates to: WLRIENVEYLRAVAEGLTCPSGI*VHFLVF Trigger: GAAGACAAGGAAATGAACCCAAATACCAGAAGGACA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | CCCAGATTCTTGTATATGTATCAAAGCTTAAGTTATCATGTTACATaGAATCTACGTGTGATGGCTTCCCTTGCTGTGGTTGCTCTAAGG | + |
Preference number: 2 (lower is better) Translates to: PRFLYMYQSLSYHVT*NLRVMASLAVVALR Trigger: CCTTAGAGCAACCACAGCAAGGGAAGCCATCACACGTAGATTCAATGTAACATGATAACTTAAGCTTTGATACATATACAAGAATCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 90 bp | TTGGCCATTTTCATAGATTACGCTGTTAGAAATCAGATAGGAGTTTaGAGTCCTTGTCTACCCCAGATTCTTGTATATGTATCAAAGCTT | + |
Preference number: 2 (lower is better) Translates to: LAIFIDYAVRNQIGV*SPCLPQILVYVSKL Trigger: AAGCTTTGATACATATACAAGAATCTGGGGTAGACAAGGACTCAAAACTCCTATCTGATTTCTAACAGCGTAATCTATGAAAATGGCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | GCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACCTaGTGCTTCCTGAGTGAGGGCAGCTGGCTTCTCAGA | + |
Preference number: 3 (lower is better) Translates to: AEHPCMFPAART*CFLSEGSWLLR Trigger: TCTGAGAAGCCAGCTGCCCTCACTCAGGAAGCAGCAGGTCCTGGCTGCAGGAAACATGCAGGGATGTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | GACACTAGCCTAATCAGCCACAAGAGGCATGTGGCATaGGACAACCCTGCTGAGGAAGCCCCAGATCAAAGC | + |
Preference number: 3 (lower is better) Translates to: DTSLISHKRHVA*DNPAEEAPDQS Trigger: GCTTTGATCTGGGGCTTCCTCAGCAGGGTTGTCCCATGCCACATGCCTCTTGTGGCTGATTAGGCTAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | TTTGCTCCACAGTGCCAAGTACATTTGGGACTGCTGTaGGTGGAACACAGGTGGTCTCAGGAGGCTTTGGCC | + |
Preference number: 3 (lower is better) Translates to: FAPQCQVHLGLL*VEHRWSQEALA Trigger: GGCCAAAGCCTCCTGAGACCACCTGTGTTCCACCCACAGCAGTCCCAAATGTACTTGGCACTGTGGAGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | TGCACTCAGCCACTGGGCTACACCCAGCCTTGCATGTaGCCTTTTGCAATGGGCTCTGACTTTCCTTTCAGT | + |
Preference number: 3 (lower is better) Translates to: CTQPLGYTQPCM*PFAMGSDFPFS Trigger: ACTGAAAGGAAAGTCAGAGCCCATTGCAAAAGGCCACATGCAAGGCTGGGTGTAGCCCAGTGGCTGAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | GCATGTTCCAGTCCTACAAGTGTAGAAGGGCACTTGTaGGCTGGCCTGCAGTGGAACGTCATTTGTTTGGCC | + |
Preference number: 3 (lower is better) Translates to: ACSSPTSVEGHL*AGLQWNVICLA Trigger: GGCCAAACAAATGACGTTCCACTGCAGGCCAGCTCACAAGTGCCCTTCTACACTTGTAGGACTGGAACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | CTGACAGGTCTTACAGTGGGCAATCAAGTGGAGAGGTaGGTTTGGGGCAGGAGGATCAGCACATTTTACAGC | + |
Preference number: 3 (lower is better) Translates to: LTGLTVGNQVER*VWGRRISTFYS Trigger: GCTGTAAAATGTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGACCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | CCTTCATTTAGGCGATGCGGAATGGGGAGCCGGAAGTaGAACCGATGCTCCAGGGAAGTAATTCCTAAATGC | + |
Preference number: 3 (lower is better) Translates to: PSFRRCGMGSRK*NRCSREVIPKC Trigger: GCATTTAGGAATTACTTCCCTGGAGCATCGGTTTCACTTCCGGCTCCCCATTCCGCATCGCCTAAATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | GGTCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTaGGGCAGGAGGATCAGCACATTTTACAGCAGTAGT | + |
Preference number: 3 (lower is better) Translates to: GLTVGNQVERWV*GRRISTFYSSS Trigger: ACTACTGCTGTAAAATGTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | CAGGCCACTTTCAGGCCTATGAGTTGGGTAAGGAAGTaGAACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: QATFRPMSWVRK*NSVCVCVCVCV Trigger: CACACACACACACACACACACACACACACTGTTCCACTTCCTTACCCAACTCATAGGCCTGAAAGTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | GTATTCCCTAGGTCAGATGAGTTAGGGCTCCAGGGTTaGGACATGCCTGACTCACCAAGCTACTCTGTATCT | + |
Preference number: 3 (lower is better) Translates to: VFPRSDELGLQG*DMPDSPSYSVS Trigger: AGATACAGAGTAGCTTGGTGAGTCAGGCATGTCCCAACCCTGGAGCCCTAACTCATCTGACCTAGGGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | TGGCTGCCATTCAGTGTGTTAACTGTGGACCTACTATaGGTTGACTCCTGGCTTTCCACACAGCCTCTACTG | + |
Preference number: 3 (lower is better) Translates to: WLPFSVLTVDLL*VDSWLSTQPLL Trigger: CAGTAGAGGCTGTGTGGAAAGCCAGGAGTCAACTCATAGTAGGTCCACAGTTAACACACTGAATGGCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | GTACAGAATGAATGGGTAGTGGTGGTTTCTGGATTCTaGGTAGATGGAGCTGTGGGGGCCACTGTCCAATTG | + |
Preference number: 3 (lower is better) Translates to: VQNEWVVVVSGF*VDGAVGATVQL Trigger: CAATTGGACAGTGGCCCCCACAGCTCCATCTACTCAGAATCCAGAAACCACCACTACCCATTCATTCTGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | CCTGCAGTGGAACGTCATTTGTTTGGCCCTGCATCCTaGGAAATAAGTCAACTGTTTTGTCCTGGGGGCAAT | + |
Preference number: 3 (lower is better) Translates to: PAVERHLFGPAS*EISQLFCPGGN Trigger: ATTGCCCCCAGGACAAAACAGTTGACTTATTTCCCAGGATGCAGGGCCAAACAAATGACGTTCCACTGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | TGGGCTACACCCAGCCTTGCATGTGGCCTTTTGCAATaGGCTCTGACTTTCCTTTCAGTACAGAATGAATGG | + |
Preference number: 3 (lower is better) Translates to: WATPSLACGLLQ*ALTFLSVQNEW Trigger: CCATTCATTCTGTACTGAAAGGAAAGTCAGAGCCCATTGCAAAAGGCCACATGCAAGGCTGGGTGTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | ACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTaGCCCCTGCTTTATAGTCATGATTCCCTTCCTGGG | + |
Preference number: 3 (lower is better) Translates to: TNAKCSHSAECP*PLLYSHDSLPG Trigger: CCCAGGAAGGGAATCATGACTATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGATTTCAGGCCTATGAGTaGGGTAAGGAAGTGGAACAG | + |
Preference number: 3 (lower is better) Translates to: LHSSNTQQNIPACFLQPGFQAYE*GKEVEQ Trigger: CTGTTCCACTTCCTTACCCAACTCATAGGCCTGAAA...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGTGGACCTACTATGAGTaGACTCCTGGCTTTCCACAC | + |
Preference number: 3 (lower is better) Translates to: LMGWGWSLQYASNNVNKQWTYYE*TPGFPH Trigger: GTGTGGAAAGCCAGGAGTCAACTCATAGTAGGTCCA...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGCTGTCCAATTGGAAGTaGGAGCCCAGGGTACTCATT | + |
Preference number: 3 (lower is better) Translates to: LMGWGWSLQYASNNVNKQLSNWK*EPRVLI Trigger: AATGAGTACCCTGGGCTCCAACTTCCAATTGGACAG...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | GCCATTCAGTGTGTTAACTGTGGACCTACTATGAGTTaGCTCCTGGCTTTCCACACAGCCTCTACTGCAATG | + |
Preference number: 3 (lower is better) Translates to: AIQCVNCGPTMS*LLAFHTASTAM Trigger: CATTGCAGTAGAGGCTGTGTGGAAAGCCAGGAGTCAACTCATAGTAGGTCCACAGTTAACACACTGAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR TCA 72 bp | ACAGGGTACCAATGCAGTCTTCCTGAAACCTTTATTTaGGAAGAGCAATGGGGGAAGAGTGCTTGGGAGGTC | + |
Preference number: 3 (lower is better) Translates to: TGYQCSLPETFI*EEQWGKSAWEV Trigger: GACCTCCCAAGCACTCTTCCCCCATTGCTCTTCTCAAATAAAGGTTTCAGGAAGACTGCATTGGTACCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR TCA 72 bp | GAGGTGGGGATAGACAGTATCTCCAGGGATTACTCATaGACACAGTGGGTTTTCACTCTGATGCCTTCGGAA | + |
Preference number: 3 (lower is better) Translates to: EVGIDSISRDYS*TQWVFTLMPSE Trigger: TTCCGAAGGCATCAGAGTGAAAACCCACTGTGTTCATGAGTAATCCCTGGAGATACTGTCTATCCCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR GCA 72 bp | AGGAAGAGAAGAACAATACTCCTGTCCCCTCTCCTCTaGTCTCTCAACTCCATCTCTCTCTGCCTCTTAGAA | + |
Preference number: 3 (lower is better) Translates to: RKRRTILLSPLL*SLNSISLCLLE Trigger: TTCTAAGAGGCAGAGAGAGATGGAGTTGAGAGAGCAGAGGAGAGGGGACAGGAGTATTGTTCTTCTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR CCA 72 bp | AAGATTTTCCCTCAGGCCACTTTCAGGCCTATGAGTTaGGTAAGGAAGTGGAACAGTGTGTGTGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: KIFPQATFRPMS*VRKWNSVCVCV Trigger: CACACACACACACACACTGTTCCACTTCCTTACCCAACTCATAGGCCTGAAAGTGGCCTGAGGGAAAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR CCA 72 bp | CAAGTACATTTGGGACTGCTGTGGGTGGAACACAGGTaGTCTCAGGAGGCTTTGGCCATTTTCATAGATTAC | + |
Preference number: 3 (lower is better) Translates to: QVHLGLLWVEHR*SQEALAIFIDY Trigger: GTAATCTATGAAAATGGCCAAAGCCTCCTGAGACCACCTGTGTTCCACCCACAGCAGTCCCAAATGTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CAA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAATCCTTATACCAGAGTaGAGAAGCCCCCTACTTAAT | + |
Preference number: 3 (lower is better) Translates to: FSDPKADHQDLLCGPALEILIPE*RSPLLN Trigger: ATTAAGTAGGGGGCTTCTCAACTCTGGTATAAGGAT...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CAA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATGTTCGGTAGAGAAGTaGCTATGGAAAAACACAGTC | + |
Preference number: 3 (lower is better) Translates to: FSDPKADHQDLLCGPALECSVEK*LWKNTV Trigger: GACTGTGTTTTTCCATAGCAACTTCTCTACCGAACA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CAA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAATCTGTTCAGTGAAGTaGGCATTTGCAGCAAAAGGA | + |
Preference number: 3 (lower is better) Translates to: FSDPKADHQDLLCGPALEICSVK*AFAAKG Trigger: TCCTTTTGCTGCAAATGCCAACTTCACTGAACAGAT...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CAA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACTGTCCTTCTGGTATTaGGGTTCATTTCCTTGTCTT | + |
Preference number: 3 (lower is better) Translates to: LHSSNTQQNIPACFLQPGLSFWY*GSFPCL Trigger: AAGACAAGGAAATGAACCCAAATACCAGAAGGACAG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR GCA 72 bp | GTCTTGTCTCATGGGGTGGGGGTGGAGTTTGCAGTATaGAAGCAACAATGTAAACAAACAGAGCTGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: VLSHGVGVEFAV*KQQCKQTELFS Trigger: TGAGAACAGCTCTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAGACAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | TTTCCAATCACACTGGAAAATACTCTTTCCACCTTATaGGATCCACAAGGTCACCGAGTGTCACCCGTGATC | + |
Preference number: 3 (lower is better) Translates to: FPITLENTLSTL*DPQGHRVSPVI Trigger: GATCACGGGTGACACTCGGTGACCTTGTGGATCCCATAAGGTGGAAAGAGTATTTTCCAGTGTGATTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGAAAGTTCAAACTGTCTaGATTTCTGCTTCCGCACTG | + |
Preference number: 3 (lower is better) Translates to: LMGWGWSLQYASNNVNKQKVQTV*ISASAL Trigger: CAGTGCGGAAGCAGAAATCAAGACAGTTTGAACTTT...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | ATTGAATCTACGTGTGATGGCTTCCCTTGCTGTGGTTaGTCTAAGGAGGAAGAGAAGAACAATACTCCTGTC | + |
Preference number: 3 (lower is better) Translates to: IESTCDGFPCCG*SKEEEKNNTPV Trigger: GACAGGAGTATTGTTCTTCTCTTCCTCCTTAGAGCAACCACAGCAAGGGAAGCCATCACACGTAGATTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | ACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTaGTCTGTCTCTTTCCAAGTAAGCAATCCTAGATGG | + |
Preference number: 3 (lower is better) Translates to: TLYLWVAFLGHT*SVSFQVSNPRW Trigger: CCATCTAGGATTGCTTACTTGGAAAGAGACAGATCAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR GCA 72 bp | GGAGAGATTCTTTATTTATGCTGTGCTGAGAGTAACTaGTTCACGGAACACGAAGCTCTTTTTGTGCATCCC | + |
Preference number: 3 (lower is better) Translates to: GEILYLCCAESN*FTEHEALFVHP Trigger: GGGATGCACAAAAAGAGCTTCGTGTTCCGTGAAGCAGTTACTCTCAGCACAGCATAAATAAAGAATCTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | CTCGGAAGATGTGACCAAGGAGAGATTCTTTATTTATaGTGTGCTGAGAGTAACTGCTTCACGGAACACGAA | + |
Preference number: 3 (lower is better) Translates to: LGRCDQGEILYL*CAESNCFTEHE Trigger: TTCGTGTTCCGTGAAGCAGTTACTCTCAGCACAGCATAAATAAAGAATCTCTCCTTGGTCACATCTTCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR CCA 72 bp | AAGTTGCTATGGAAAAACACAGTCCTTGGCAACCAATaGCTGCCATTCAGTGTGTTAACTGTGGACCTACTA | + |
Preference number: 3 (lower is better) Translates to: KLLWKNTVLGNQ*LPFSVLTVDLL Trigger: TAGTAGGTCCACAGTTAACACACTGAATGGCAGCCATTGGTTGCCAAGGACTGTGTTTTTCCATAGCAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATGAAAGTTTTTCTCATTaGAACTGGGAGAACCTTTCA | + |
Preference number: 3 (lower is better) Translates to: NTNAKCSHSAECPWPLLYESFSH*NWENLS Trigger: TGAAAGGTTCTCCCAGTTCAAATGAGAAAAACTTTC...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGCCCAGGGTACTCATTTaGAAGTTGTGTCTACATTTA | + |
Preference number: 3 (lower is better) Translates to: LLCGPALEFRISKVFQTLPRVLI*KLCLHL Trigger: TAAATGTAGACACAACTTCAAAATGAGTACCCTGGG...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | TCATGTTACATTGAATCTACGTGTGATGGCTTCCCTTaGTGTGGTTGCTCTAAGGAGGAAGAGAAGAACAAT | + |
Preference number: 3 (lower is better) Translates to: SCYIESTCDGFP*CGCSKEEEKNN Trigger: ATTGTTCTTCTCTTCCTCCTTAGAGCAACCACAGCAAGGGAAGCCATCACACGTAGATTCAATGTAACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | ATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTaGGAGAACCTTTCACCCCATTCCCGTGTTGTCATT | + |
Preference number: 3 (lower is better) Translates to: MSLAKESFSHLN*ENLSPHSRVVI Trigger: AATGACAACACGGGAATGGGGTGAAAGGTTCTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR CCA 72 bp | AGCGTGTGCTCACGCGTGTTAACAGACTCTAAACACTaGTCTGCATCTCTACCCATCAATTATTCTAATATG | + |
Preference number: 3 (lower is better) Translates to: SVCSRVLTDSKH*SASLPINYSNM Trigger: CATATTAGAATAATTGATGGGTAGAGATGCAGACCAGTGTTTAGAGTCTGTTAACACGCGTGAGCACACGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTTTATTTGTGTTCCATaGTGTGTTTCCTCAGGAAAG | + |
Preference number: 3 (lower is better) Translates to: LLCGPALEFRISKVFQTLFICVP*CVSSGK Trigger: CTTTCCTGAGGAAACACACAATGGAACACAAATAAA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTGGGTACCTTTTCCTCTaGAAGAACAAGTTGTTGAGT | + |
Preference number: 3 (lower is better) Translates to: WLRIENVEYLRAVAEGLTGYLFL*KNKLLS Trigger: ACTCAACAACTTGTTCTTCAAGAGGAAAAGGTACCC...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | TGTTCCATTGTGTGTTTCCTCAGGAAAGAGAAGACATaGAAAGTTCAGTTGATAGTGGAAGCAACAGTGCTT | + |
Preference number: 3 (lower is better) Translates to: CSIVCFLRKEKT*KVQLIVEATVL Trigger: AAGCACTGTTGCTTCCACTATCAACTGAACTTTGCATGTCTTCTCTTTCCTGAGGAAACACACAATGGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | TCACACACTCAGCTAATTCTAATTATACCTCTCAAATaGTGTCCCCTGGCAGCCAATCCTAGGAATTTCTAT | + |
Preference number: 3 (lower is better) Translates to: SHTQLILIIPLK*CPLAANPRNFY Trigger: ATAGAAATTCCTAGGATTGGCTGCCAGGGGACAGCATTTGAGAGGTATAATTAGAATTAGCTGAGTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | ATACAAAAATATCAAACCTTTGACCTCAGGACAGTGTaGAGGATATGGCGTACACAGCGCATTCAAAAGACT | + |
Preference number: 3 (lower is better) Translates to: IQKYQTFDLRTV*RIWRTQRIQKT Trigger: AGTCTTTTGAATGCGCTGTGTACGCCATATCCTGCACACTGTCCTGAGGTCAAAGGTTTGATATTTTTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | TCATTAAGAAACCCTCTGGGCATCACACACATGGTGTaGCTTTTCACTACTTATCATTGTTATGCTACACAG | + |
Preference number: 3 (lower is better) Translates to: SLRNPLGITHMV*LFTTYHCYATQ Trigger: CTGTGTAGCATAACAATGATAAGTAGTGAAAAGCCACACCATGTGTGTGATGCCCAGAGGGTTTCTTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | CAAAATGCCCTTCCTTCAGGTTTTAGAACTGGCCTTTaGCTGAGGATAGAGAATGTAGAATACTTAAGAGCA | + |
Preference number: 3 (lower is better) Translates to: QNALPSGFRTGL*LRIENVEYLRA Trigger: TGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCAAAGGCCAGTTCTAAAACCTGAAGGAAGGGCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGCACCCCATTCCCGTGTaGTCATTTACAAATGCTGAG | + |
Preference number: 3 (lower is better) Translates to: SILYMSLAKESFSHLNWEHPIPV*SFTNAE Trigger: CTCAGCATTTGTAAATGACAACACGGGAATGGGGTG...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGCTTTCTGGGTCACACTaGATCTGTCTCTTTCCAAGT | + |
Preference number: 3 (lower is better) Translates to: SILYMSLAKESFSHLNWELSGSH*ICLFPS Trigger: ACTTGGAAAGAGACAGATCAAGTGTGACCCAGAAAG...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | TTGGAGTGTCATTATAGGAAACTGGGTTGGAAAACCTaGATGAATGATCTGTTCAGTGAAGTTGGCATTTGC | + |
Preference number: 3 (lower is better) Translates to: LECHYRKLGWKT*MNDLFSEVGIC Trigger: GCAAATGCCAACTTCACTGAACAGATCATTCATTCAGGTTTTCCAACCCAGTTTCCTATAATGACACTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | GAACTTCTACATTCAAGTGCAGTTTTAATACGAAGATaGAAGACGCCCGTTAGCAAACAAGACACAATGCTG | + |
Preference number: 3 (lower is better) Translates to: ELLHSSAVLIRR*KTPVSKQDTML Trigger: CAGCATTGTGTCTTGTTTGCTAACGGGCGTCTTTCATCTTCGTATTAAAACTGCACTTGAATGTAGAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR GCA 72 bp | GAAGATGAAAGACGCCCGTTAGCAAACAAGACACAATaGTGTAGTTTAATGCCATTGCTTTTTCTCCTAAGA | + |
Preference number: 3 (lower is better) Translates to: EDERRPLANKTQ*CSLMPLLFLLR Trigger: TCTTAGGAGAAAAAGCAATGGCATTAAACTACAGCATTGTGTCTTGTTTGCTAACGGGCGTCTTTCATCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | CATCTCAGAAGTACAATATACTACACACCAACCCTTTaGAGTGTCATTATAGGAAACTGGGTTGGAAAACCT | + |
Preference number: 3 (lower is better) Translates to: HLRSTIYYTPTL*SVIIGNWVGKP Trigger: AGGTTTTCCAACCCAGTTTCCTATAATGACACTCCAAAGGGTTGGTGTGTAGTATATTGTACTTCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CCA 72 bp | AATACTGATACACCATGTTCGAAAGCAGTGATTTCTTaGTACAATATAACATTAGCCGGGGAGACTGCTTTT | + |
Preference number: 3 (lower is better) Translates to: NTDTPCSKAVIS*YNITLAGETAF Trigger: AAAAGCAGTCTCCCCGGCTAATGTTATATTGTACCAAGAAATCACTGCTTTCGAACATGGTGTATCAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR TCA 72 bp | TATCTTCCTCAAGGTTTGTGGTTAAATCTCTTACTCTaGACTTCTACATTCAAGTGCAGTTTTAATACGAAG | + |
Preference number: 3 (lower is better) Translates to: YLPQGLWLNLLL*TSTFKCSFNTK Trigger: CTTCGTATTAAAACTGCACTTGAATGTAGAAGTTCAGAGTAAGAGATTTAACCACAAACCTTGAGGAAGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACTACACAGCTCCTGCGTaGTCGTCTTCCAGGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHYTAPA*SSSRGA Trigger: AGCTCCCCTGGAAGACGACCACGCAGGAGCTGTGTA...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | CTAGGAGTGGGGCTGCTGGGCAGGTATGTACTGGAGTaGGGCAGCATGGTAACTGAGCAAGAATCACCCGAG | + |
Preference number: 4 (lower is better) Translates to: LGVGLLGRYVLE*GSMVTEQESPE Trigger: CTCGGGTGATTCTTGCTCAGTTACCATGCTGCCCAACTCCAGTACATACCTGCCCAGCAGCCCCACTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | TCGCCTTATGCGGTGCTTGAGCTGAAACCTAGGGCCTaGCATGAGTTCGCTCTGCACTCAGCCACTGGGCTA | + |
Preference number: 4 (lower is better) Translates to: SPYAVLELKPRA*HEFALHSATGL Trigger: TAGCCCAGTGGCTGAGTGCAGAGCGAACTCATGCAAGGCCCTAGGTTTCAGCTCAAGCACCGCATAAGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACCCGAGCTTCAGTGAATaGCTCTTTCCTGGCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHPSFSE*LFPGCV Trigger: GACACAGCCAGGAAAGAGGCATTCACTGAAGCTCGG...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGACGACCTGGCCGGTGTaGTTGTACCGAGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLTTWPV*LYRGCP Trigger: TGGGCAGCCTCGGTACAATCACACCGGCCAGGTCGT...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACTGGACACATCCAGGGTaGGGTCTGAAACGCATCTTT | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHWTHPG*GLKRIF Trigger: AAAGATGCGTTTCAGACCTCACCCTGGATGTGTCCA...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAAATGTACACAGCTCCTaGGTGGTCGTCTTCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALENVHSS*VVVFQG Trigger: CCCCTGGAAGACGACCACGCAGGAGCTGTGTACATT...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATCAGCGGCACTCGGCCTaGGAGCCCGTCTTTGGATAT | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYQRHSA*EPVFGY Trigger: ATATCCAAAGACGGGCTCCCAGGCCGAGTGCCGCTG...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACCGTTTAAAAAGGCAGTaGCACTTTCCCAGGGGTAGA | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHRLKRQ*HFPRGR Trigger: TCTACCCCTGGGAAAGTGTCACTGCCTTTTTAAACG...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACAGATTTGGAGAATACTaGACCACTGTCCGGGTGTTG | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHRFGEY*TTVRVL Trigger: CAACACCCGGACAGTGGTTCAGTATTCTCCAAATCT...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACGATGAGTTTTCACTCTaGAGTTCTCCCCGTATGGTA | + |
Preference number: 4 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHDEFSL*SSPRMV Trigger: TACCATACGGGGAGAACTTCAGAGTGAAAACTCATC...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
||
3UTR CAA 72 bp | AGCCACTGGGCTACACCCAGCCTTGCATGTGGCCTTTaGCAATGGGCTCTGACTTTCCTTTCAGTACAGAAT | + |
Preference number: 4 (lower is better) Translates to: SHWATPSLACGL*QWALTFLSVQN Trigger: ATTCTGTACTGAAAGGAAAGTCAGAGCCCATTGCAAAAGGCCACATGCAAGGCTGGGTGTAGCCCAGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAACCGTCTTTGGATATCTaGATAGCCAGCTCTCGTTTC | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALEPSLDI*IASSRF Trigger: GAAACGAGAGCTGGCTATTCAGATATCCAAAGACGG...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACAACCTGTGTCTGTTTaGGGCCAATGTCCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGQPVSV*GQCPSS Trigger: AGAGGATGGACATTGGCCCCAAACAGACACAGGTTG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCTACAGCCACATCTCTaGCCCAGAAGAGGGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLLQPHL*PRRGQL Trigger: GAGCTGCCCTCTTCTGGGCCAGAGATGTGGCTGTAG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATTGCCAGCCGAAGTTCTaGCATTGGGAAATGCCCTCT | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYCQPKF*HWEMPS Trigger: AGAGGGCATTTCCCAATGCCAGAACTTCGGCTGGCA...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | GACATGAGACAGGTCTGGGCCTGGGTCTTCTTCAGTTaGCTCATCACTGTGGCAGAACAGGATAGGAATTTC | + |
Preference number: 4 (lower is better) Translates to: DMRQVWAWVFFS*LITVAEQDRNF Trigger: GAAATTCCTATCCTGTTCTGCCACAGTGATGAGCAAACTGAAGAAGACCCAGGCCCAGACCTGTCTCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGATGTAGAAGGAGTGCCTaGTGCATTCGGATTCTCGAA | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGCRRSA*CIRILE Trigger: TTCGAGAATCCGAATGCATCAGGCACTCCTTCTACA...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAAATATGTCCATGGACTaGGTTTGGCAGAGCGTCATC | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGNMSMD*VWQSVI Trigger: GATGACGCTCTGCCAAACTCAGTCCATGGACATATT...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGCGTACACGTACACCTTaGCCTGTTCCTCTTTCTCTG | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQRTRTP*PVPLSL Trigger: CAGAGAAAGAGGAACAGGGCAAGGTGTACGTGTACG...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGTTTTACAGCAGCAACTaGTGTTCCAAAACGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQFYSSN*CSKTGP Trigger: GGGGCCCGTTTTGGAACAGCAGTTGCTGCTGTAAAA...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | GAAGATTTTCCCTCAGGCCACTTTCAGGCCTATGAGTaGGGTAAGGAAGTGGAACAGTGTGTGTGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: EDFPSGHFQAYE*GKEVEQCVCVC Trigger: ACACACACACACACACTGTTCCACTTCCTTACCCAACTCATAGGCCTGAAAGTGGCCTGAGGGAAAATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | CTGCTGTGGGTGGAACACAGGTGGTCTCAGGAGGCTTaGGCCATTTTCATAGATTACGCTGTTAGAAATCAG | + |
Preference number: 4 (lower is better) Translates to: LLWVEHRWSQEA*AIFIDYAVRNQ Trigger: CTGATTTCTAACAGCGTAATCTATGAAAATGGCCAAAGCCTCCTGAGACCACCTGTGTTCCACCCACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACTCCCTTCGGATTGGTaGCTAAAGTTGATCCAAATG | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGLPSDW*LKLIQM Trigger: CATTTGGATCAACTTTAGTCACCAATCCGAAGGGAG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGCTATGGAAAATCGCTaGATGTTTTCATCCTCACAG | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALEAMENR*MFSSSQ Trigger: CTGTGAGGATGAAAACATTCAGCGATTTTCCATAGC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTCAGCGAATCAAGGGTaGCACGGTACTGCAGATCAG | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLSANQG*HGTADQ Trigger: CTGATCTGCAGTACCGTGTCACCCTTGATTCGCTGA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGGATTGTGCCTCTTTTaGGAACCTCAGACTTTGATA | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALEGLCLF*EPQTLI Trigger: TATCAAAGTCTGAGGTTCTCAAAAGAGGCACAATCC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACTATGTCAAGCTGTGTaGTACATTCTTGTACAGGGG | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGLCQAV*YILVQG Trigger: CCCCTGTACAAGAATGTAGCACACAGCTTGACATAG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATGATGAACAGCAGGTCTaGTTAATTGGTTCCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYDEQQV*LIGSRL Trigger: GAGCCTGGAACCAATTAAGCAGACCTGCTGTTCATC...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGCCTGAGGGAATGCGTTaGGCATACTCTTTCCTTATG | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQPEGMR*AYSFLM Trigger: CATAAGGAAAGAGTATGCGCAACGCATTCCCTCAGG...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCTCCAAGGCCTCCAATaGTCACGTCAGTCAGACCAT | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLLQGLQ*SRQSDH Trigger: ATGGTCTGACTGACGTGACCATTGGAGGCCTTGGAG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACACGGGCCCATTTTCTaGATCAGTGAGGTTAAAATC | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGHGPIF*ISEVKI Trigger: GATTTTAACCTCACTGATCCAGAAAATGGGCCCGTG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACAGGAACAGTCTCATTaGCAGCAACTGAAATGTGGT | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGQEQSH*QQLKCG Trigger: ACCACATTTCAGTTGCTGCCAATGAGACTGTTCCTG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGACCGAAGTTCTGGCATTaGGAAATGCCCTCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGPKFWH*EMPSFS Trigger: AGAAAAAGAGGGCATTTCCCAATGCCAGAACTTCGG...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCTTCACACAAGGCATTaGTCTCTCTCTCCCAACTGG | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLLHTRH*SLSPNW Trigger: CCAGTTGGGAGAGAGAGATCAATGCCTTGTGTGAAG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTTCAAACGAAGCTGCTaGCTGGTCAGCTGTAGCTTC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLFKRSC*LVSCSF Trigger: GAAGCTACAGCTGACCAGTCAGCAGCTTCGTTTGAA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCATGACCCAGTCCTGTaGATAATGAGCACTGAAGCC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLHDPVL*IMSTEA Trigger: GGCTTCAGTGCTCATTATTCACAGGACTGGGTCATG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCTCATTGGCAGCAACTaGAATGTGGTGTTCACTCGC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLLIGSN*NVVFTR Trigger: GCGAGTGAACACCACATTTCAGTTGCTGCCAATGAG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATCTTTAGTGGCCTTTTaGAGAATCCAATCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALESLVAF*RIQSST Trigger: TGTGGAAGATTGGATTCTTCAAAAGGCCACTAAAGA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGGCCTATTTTGTTTGCTaGCACCAGGACCTCTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLAYFVC*HQDLFC Trigger: ACAGAAGAGGTCCTGGTGGCAGCAAACAAAATAGGC...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTCTCCACTGAGTGTCTaGAGAATGTTGACGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLSPLSV*RMLTSP Trigger: TGGGGACGTCAACATTCTGCAGACACTCAGTGGAGA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCAATCTTGCAGGTACTaGAGTCCTGGATTGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLQSCRY*SPGLCL Trigger: GAGGCACAATCCAGGACTGCAGTACCTGCAAGATTG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGCTCCAGTTCTTGCTTTaGGTTGGCCAACTAAAGGAG | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLLQFLL*VGQLKE Trigger: CTCCTTTAGTTGGCCAACCCAAAGCAAGAACTGGAG...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGAGAAGTGCTTTTCGGTaGGCTCACTTGCGATTGATT | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQRSAFR*AHLRLI Trigger: AATCAATCGCAAGTGAGCCCACCGAAAAGCACTTCT...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATATTATCCTTCAGGGATaGACAGCAGGTCTGCTTAAT | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYIILQG*TAGLLN Trigger: ATTAAGCAGACCTGCTGTTCATCCCTGAAGGATAAT...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGTTGGTTTCCACAAGATaGGTGAGACATTCACTTGAC | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQLVSTR*VRHSLD Trigger: GTCAAGTGAATGTCTCACTCATCTTGTGGAAACCAA...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTGCATACTGTTTCTTTaGCCTCCACACGGCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLCILFL*PPHGSF Trigger: AAAACTGCCGTGTGGAGGGCAAAGAAACAGTATGCA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGCAAGGCTTCGAGGTCTaGAGTTTACATTATCAGAAG | + |
Preference number: 4 (lower is better) Translates to: LMGWGWSLQYASNNVNKQQGFEV*SLHYQK Trigger: CTTCTGATAATGTAAACTGCAGACCTCGAAGCCTTG...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGATGTTCCCACAGTCTTTaGCAAAAGGAATATGTCCAT | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGCSHSL*QKEYVH Trigger: ATGGACATATTCCTTTTGCCAAAGACTGTGGGAACA...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATTTGAACTTGTCATTCTaGGATCTGACAATCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYLNLSF*DLTISR Trigger: CCTGCTGATTGTCAGATCCCAGAATGACAAGTTCAA...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATTCGTTTTCATACTGTTaGACGGTGTATCCAAACATG | + |
Preference number: 4 (lower is better) Translates to: NTNAKCSHSAECPWPLLYSFSYC*TVYPNM Trigger: CATGTTTGGATACACCGTTCAACAGTATGAAAACGA...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGAACGAGTTCACAACTTaGAATGTAGGGCTGACATCA | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLNEFTT*NVGLTS Trigger: TGATGTCAGCCCTACATTTCAAGTTGTGAACTCGTT...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGGGGCTCACTTGCGATTaGTTTTATCTCCTCCACAAA | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLGLTCD*FYLLHK Trigger: TTTGTGGAGGAGATAAAATCAATCGCAAGTGAGCCC...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACGCACTGAAGCCGGTCTaGGACATCTCCATTTCAAAC | + |
Preference number: 4 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHALKPV*DISISN Trigger: GTTTGAAATGGAGATGTCTCAGACCGGCTTCAGTGC...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTGTCATTCTGGGATCTaGCAATCAGCAGGTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLCHSGI*QSAGSF Trigger: AAAAGAACCTGCTGATTGTCAGATCCCAGAATGACA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTTCACAGTAGTAACACACAGCAGAACATCCCTGCATGTTTCCTGCAGCCAGGAGATCTCCTCAATTCCTaGAAAAATCAGATTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: LHSSNTQQNIPACFLQPGDLLNS*KNQIWR Trigger: TCTCCAAATCTGATTTTTTCAGGAATTGAGGAGATC...TCCTGGCTGCAGGAAACATGCAGGGATGTTCTGCTGTGTGTTACTACTGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTATCTGGTTAGCCTTCTaGATGACCACAGTTCCGTTC | + |
Preference number: 4 (lower is better) Translates to: WLRIENVEYLRAVAEGLTIWLAF*MTTVPF Trigger: GAACGGAACTGTGGTCATGCAGAAGGCTAACCAGAT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATCTTGTTTTCTTTTGTaGATGAATTATCCTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: FSDPKADHQDLLCGPALESCFLL*MNYPSG Trigger: CCCTGAAGGATAATTCATGCACAAAAGAAAACAAGA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTCTGGCATTGGGAAATaGCCTCTTTTTCTAATCGTG | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLSGIGK*PLFLIV Trigger: CACGATTAGAAAAAGAGGGCATTTCCCAATGCCAGA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTCTCTCTCTCCCAACTaGACACTTATAGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLSLSPN*TLIDIS Trigger: GGAGATGTCTATAAGTGTCCAGTTGGGAGAGAGAGA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTACATTATCAGAAGATaGCCATCCAGTTGGGTACAG | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLYIIRR*PSSWVQ Trigger: CTGTACCCAACTGGATGGTCATCTTCTGATAATGTA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGGAGAACCTCAGACTTTaGTATTGTCATTTTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: LLCGPALEFRISKVFQTLENLRL*YCHFLP Trigger: GGGAAGAAAATGACAATATCAAAGTCTGAGGTTCTC...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGGCAGGTCTGCTTAATTaGTTCCAGGCTCATTTGATA | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLAGLLN*FQAHLI Trigger: TATCAAATGAGCCTGGAACCAATTAAGCAGACCTGC...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGCATACTCTTTCCTTATaGTCTTGCCACTGCCATGAT | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLHTLSL*SCHCHD Trigger: ATCATGGCAGTGGCAAGACCATAAGGAAAGAGTATG...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACGCAGCAACTGAAATGTaGTGTTCACTCGCAGAACTG | + |
Preference number: 4 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHAATEM*CSLAEL Trigger: CAGTTCTGCGAGTGAACACCACATTTCAGTTGCTGC...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | TTTCATGTGAAACTGGTGGTATGTTCGGTAGAGAAGTaGCTATGGAAAAACACAGTCCTTGGCAACCAATGG | + |
Preference number: 4 (lower is better) Translates to: FHVKLVVCSVEK*LWKNTVLGNQW Trigger: CCATTGGTTGCCAAGGACTGTGTTTTTCCATAGCAACTTCTCTACCGAACATACCACCAGTTTCACATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGGACCTCTTCTGTGGATaGATACTTATTGAGGTTGAA | + |
Preference number: 4 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLDLFCG*ILIEVE Trigger: TTCAACCTCAATAAGTATTCATCCACAGAAGAGGTC...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | TTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTaGAACTGGGAGAACCTTTCACCCCATTCCCGTGTT | + |
Preference number: 4 (lower is better) Translates to: LYMSLAKESFSH*NWENLSPHSRV Trigger: AACACGGGAATGGGGTGAAAGGTTCTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | GCATCTCAGAAGTACAATATACTACACACCAACCCTTaGGAGTGTCATTATAGGAAACTGGGTTGGAAAACC | + |
Preference number: 4 (lower is better) Translates to: ASQKYNILHTNP*ECHYRKLGWKT Trigger: GGTTTTCCAACCCAGTTTCCTATAATGACACTCCAAAGGGTTGGTGTGTAGTATATTGTACTTCTGAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTTATGGTCTTGCCACTaGCATGATAAATGTACACAG | + |
Preference number: 4 (lower is better) Translates to: WLRIENVEYLRAVAEGLTLWSCH*HDKCTQ Trigger: CTGTGTACATTTATCATGGCAGTGGCAAGACCATAA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGAACGAAGCTGCTGACTaGTCAGCTGTAGCTTCCAAA | + |
Preference number: 4 (lower is better) Translates to: SILYMSLAKESFSHLNWENEAAD*SAVASK Trigger: TTTGGAAGCTACAGCTGACCAGTCAGCAGCTTCGTT...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTCGCAGCTATCTTTTTaGATCTCCTCAATTCCTGAA | + |
Preference number: 4 (lower is better) Translates to: WLRIENVEYLRAVAEGLTSQLSF*ISSIPE Trigger: TTCAGGAATTGAGGAGATCCAAAAAGATAGCTGCGA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGAAAGGAATATGTCCATaGACTGAGTTTGGCAGAGCG | + |
Preference number: 4 (lower is better) Translates to: SILYMSLAKESFSHLNWEKGICP*TEFGRA Trigger: CGCTCTGCCAAACTCAGTCCATGGACATATTCCTTT...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CCA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGCATCTGACGTCAGATTaGGAAATGAAATTGCCAGCC | + |
Preference number: 4 (lower is better) Translates to: SILYMSLAKESFSHLNWEHLTSD*EMKLPA Trigger: GGCTGGCAATTTCATTTCCCAATCTGACGTCAGATG...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR TCA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGTTTCCACAAGATGAGTaGGACATTCACTTGACTCAC | + |
Preference number: 4 (lower is better) Translates to: SILYMSLAKESFSHLNWEFPQDE*DIHLTH Trigger: GTGAGTCAAGTGAATGTCTCACTCATCTTGTGGAAA...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | TTAAAAATATTTCCCATTGCTTTCTACACTGTATCTTaGGGTAGCCTTTCTGGGTCACACTTGATCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: LKIFPIAFYTVS*GSLSGSHLICL Trigger: GAGACAGATCAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAATATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR GCA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACCTCATGTGTTACATTTaGTCCATATTGTACAATTCC | + |
Preference number: 4 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHLMCYI*SILYNS Trigger: GGAATTGTACAATATGGAGCAAATGTAACACATGAG...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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3UTR CAA 72 bp | TTCATAGATTACGCTGTTAGAAATCAGATAGGAGTTTaGAGTCCTTGTCTACCCCAGATTCTTGTATATGTA | + |
Preference number: 4 (lower is better) Translates to: FIDYAVRNQIGV*SPCLPQILVYV Trigger: TACATATACAAGAATCTGGGGTAGACAAGGACTCAAAACTCCTATCTGATTTCTAACAGCGTAATCTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | TCCCGCAAAGGCGCTCAGGAGGATAACCCACAGCGGCACTCGGCCTaGGAGCCCGTCTTTGGATATCTGAATAGCCAGCTCTCGTTTCCG | + |
Preference number: 5 (lower is better) Translates to: SRKGAQEDNPQRHSA*EPVFGYLNSQLSFP Trigger: CGGAAACGAGAGCTGGCTATTCAGATATCCAAAGACGGGCTCCCAGGCCGAGTGCCGCTGTGGGTTATCCTCCTGAGCGCCTTTGCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 90 bp | ATAACCCACAGCGGCACTCGGCCTGGGAGCCCGTCTTTGGATATCTaGATAGCCAGCTCTCGTTTCCGGTTGCTGCTGCTTAAAGTCAGC | + |
Preference number: 5 (lower is better) Translates to: ITHSGTRPGSPSLDI*IASSRFRLLLLKVS Trigger: GCTGACTTTAAGCAGCAGCAACCGGAAACGAGAGCTGGCTATTCAGATATCCAAAGACGGGCTCCCAGGCCGAGTGCCGCTGTGGGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | CCACATCTCTGGCCCAGAAGAGGGCAGCTCCTCCAAGGCCTCCAATaGTCACGTCAGTCAGACCATCGCCATTTAAATCCATCTCTCCGT | + |
Preference number: 5 (lower is better) Translates to: PHLWPRRGQLLQGLQ*SRQSDHRHLNPSLR Trigger: ACGGAGAGATGGATTTAAATGGCGATGGTCTGACTGACGTGACCATTGGAGGCCTTGGAGGAGCTGCCCTCTTCTGGGCCAGAGATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | TGTACCGAGGCTGCCCAGCGATATAGAGCACATCTCCCGGGATGGTaGCAGAGTTCACTGTGTAACCCAAGTAAGAAGCAAGAGGCTCGT | + |
Preference number: 5 (lower is better) Translates to: CTEAAQRYRAHLPGW*QSSLCNPSKKQEAR Trigger: ACGAGCCTCTTGCTTCTTACTTGGGTTACACAGTGAACTCTGCCACCATCCCGGGAGATGTGCTCTATATCGCTGGGCAGCCTCGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | GATTGTACCGAGGCTGCCCAGCGATATAGAGCACATCTCCCGGGATaGTGGCAGAGTTCACTGTGTAACCCAAGTAAGAAGCAAGAGGCT | + |
Preference number: 5 (lower is better) Translates to: DCTEAAQRYRAHLPG*WQSSLCNPSKKQEA Trigger: AGCCTCTTGCTTCTTACTTGGGTTACACAGTGAACTCTGCCACCATCCCGGGAGATGTGCTCTATATCGCTGGGCAGCCTCGGTACAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACCTTGGTGGGCTCAGTTaGAAAGGTGGTGTTATGAGG | + |
Preference number: 5 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHLGGLS*KGGVMR Trigger: CCTCATAACACCACCTTTCAAACTGAGCCCACCAAG...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | TCCCATCCCCACCTGAGGGAATGCGTTGCGCATACTCTTTCCTTATaGTCTTGCCACTGCCATGATAAATGTACACAGCTCCTGCGTGGT | + |
Preference number: 5 (lower is better) Translates to: SHPHLRECVAHTLSL*SCHCHDKCTQLLRG Trigger: ACCACGCAGGAGCTGTGTACATTTATCATGGCAGTGGCAAGACCATAAGGAAAGAGTATGCGCAACGCATTCCCTCAGGTGGGGATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAAGCGTACACGTACACCTaGCCCTGTTCCTCTTTCTCT | + |
Preference number: 5 (lower is better) Translates to: FSDPKADHQDLLCGPALEAYTYT*PCSSFS Trigger: AGAGAAAGAGGAACAGGGCAAGGTGTACGTGTACGC...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS GCA 90 bp | TTTGATATTCAAACCTCGTCTGATTCACAGCGTACACGTACACCTTaGCCTGTTCCTCTTTCTCTGTCCCCATATACATGGGAGCCCCGA | + |
Preference number: 5 (lower is better) Translates to: FDIQTSSDSQRTRTP*PVPLSLSPYTWEPR Trigger: TCGGGGCTCCCATGTATATGGGGACAGAGAAAGAGGAACAGGGCAAGGTGTACGTGTACGCTGTGAATCAGACGAGGTTTGAATATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGGCCGAAGTTCTGGCATaGGGAAATGCCCTCTTTTTC | + |
Preference number: 5 (lower is better) Translates to: LMGWGWSLQYASNNVNKQAEVLA*GNALFF Trigger: GAAAAAGAGGGCATTTCCCAATGCCAGAACTTCGGC...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCTTACAGTGGGCAATCAAGTGGAGAGGTGGGTTTGGGGCAGGAGGATCAGCACTACATTTGCTCCATATaGTACAATTCCAACCTGTGT | + |
Preference number: 5 (lower is better) Translates to: SYSGQSSGEVGLGQEDQHYICSI*YNSNLC Trigger: ACACAGGTTGGAATTGTACAATATGGAGCAAATGTA...GTGCTGATCCTCCTGCCCCAAACCCACCTCTCCACTTGATTGCCCACTGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATGAAACGCATCTTTCCTaGTTCCCACAGTCTTTGGCA | + |
Preference number: 5 (lower is better) Translates to: NTNAKCSHSAECPWPLLYETHLS*FPQSLA Trigger: TGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTC...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGCTGTCTCCCTTGTTTTaGACGGTGAGGCTGACATTG | + |
Preference number: 5 (lower is better) Translates to: LLCGPALEFRISKVFQTLLSPLF*TVRLTL Trigger: CAATGTCAGCCTCACCGTCAAAAACAAGGGAGACAG...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGTCAGGAACAGTCTCATaGGCAGCAACTGAAATGTGG | + |
Preference number: 5 (lower is better) Translates to: LMGWGWSLQYASNNVNKQSGTVS*AATEMW Trigger: CCACATTTCAGTTGCTGCCAATGAGACTGTTCCTGA...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TTCTCAGATCCAAAGGCTGACCACCAGGATCTCCTTTGTGGACCGGCTCTAGAATGGATTGTGCCTCTTTaGAGAACCTCAGACTTTGAT | + |
Preference number: 5 (lower is better) Translates to: FSDPKADHQDLLCGPALEWIVPL*RTSDFD Trigger: ATCAAAGTCTGAGGTTCTCAAAAGAGGCACAATCCA...TTCTAGAGCCGGTCCACAAAGGAGATCCTGGTGGTCAGCCTTTGGATCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 90 bp | CTTGGTGGAATTAATCAGCTCAGGAACAGTCTCATTGGCAGCAACTaGAATGTGGTGTTCACTCGCAGAACTGTAAAACTGCAGTCCGAC | + |
Preference number: 5 (lower is better) Translates to: LGGINQLRNSLIGSN*NVVFTRRTVKLQSD Trigger: GTCGGACTGCAGTTTTACAGTTCTGCGAGTGAACACCACATTTCAGTTGCTGCCAATGAGACTGTTCCTGAGCTGATTAATTCCACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACCCAACCTGTGTCTGTTaGGGGCCAATGTCCATCCTC | + |
Preference number: 5 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHPTCVC*GPMSIL Trigger: GAGGATGGACATTGGCCCCAAACAGACACAGGTTGG...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATAACGGTGAGGTTTCTTaGAATCCTCCTTTCCTGAGT | + |
Preference number: 5 (lower is better) Translates to: NTNAKCSHSAECPWPLLYNGEVS*NPPFLS Trigger: ACTCAGGAAAGGAGGATTCAAAGAAACCTCACCGTT...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTACGCACTGTCTCCCTaGTTTTTGACGGTGAGGCTG | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTYALSP*FLTVRL Trigger: CAGCCTCACCGTCAAAAACAAGGGAGACAGTGCGTA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 90 bp | GGAGAACCAATAAGAACCCATTTGCCTTCTTCGTTTTCATACTGTTaGACGGTGTATCCAAACATGTCCTCCACTGGACCACTGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: GEPIRTHLPSSFSYC*TVYPNMSSTGPLKL Trigger: GAGCTTCAGTGGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTATGAAAACGAAGAAGGCAAATGGGTTCTTATTGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS GCA 90 bp | TTAACAATAGTGACCAGGGCCAACTCATCTGAGACGTTGAAGAAGTaGTTTTCGGTGGGCTCACTTGCGATTGATTTTATCTCCTCCACA | + |
Preference number: 5 (lower is better) Translates to: LTIVTRANSSETLKK*FSVGSLAIDFISST Trigger: TGTGGAGGAGATAAAATCAATCGCAAGTGAGCCCACCGAAAAGCACTTCTTCAACGTCTCAGATGAGTTGGCCCTGGTCACTATTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | TCTCCCTTGTTTTTGACGGTGAGGCTGACATTGAACTTGTCATTCTaGGATCTGACAATCAGCAGGTTCTTTTCTGTTGTGGACACATCC | + |
Preference number: 5 (lower is better) Translates to: SPLFLTVRLTLNLSF*DLTISRFFSVVDTS Trigger: GGATGTGTCCACAACAGAAAAGAACCTGCTGATTGTCAGATCCCAGAATGACAAGTTCAATGTCAGCCTCACCGTCAAAAACAAGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | AACACAAACGCCAAATGTAGTCACAGTGCTGAGTGTCCTTGGCCCCTGCTTTATAAGCTCATGGAGTTTTaGACATCAACGTTGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: NTNAKCSHSAECPWPLLYKLMEF*TSTLKE Trigger: CTCCTTCAACGTTGATGTCAAAAACTCCATGAGCTT...ATAAAGCAGGGGCCAAGGACACTCAGCACTGTGACTACATTTGGCGTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TTTCCCATTGCTTTCTACACTGTATCTTTGGGTAGCCTTTCTGGGTCACACTTGTCTCCAGTTCTTGCTTaGGGTTGGCCAACTAAAGGA | + |
Preference number: 5 (lower is better) Translates to: FPIAFYTVSLGSLSGSHLSPVLA*GWPTKG Trigger: TCCTTTAGTTGGCCAACCCAAAGCAAGAACTGGAGA...CAAGTGTGACCCAGAAAGGCTACCCAAAGATACAGTGTAGAAAGCAATGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTTCATCCTCACAGTCTaGGATGACCTGTTTCAGGCG | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTFILTV*DDLFQA Trigger: CGCCTGAAACAGGTCATCCAAGACTGTGAGGATGAA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 90 bp | CCTGCGGCCTATTTTGTTTGCTGCCACCAGGACCTCTTCTGTGGATaGATACTTATTGAGGTTGAACTCATGTGTTACATTTGCTCCATA | + |
Preference number: 5 (lower is better) Translates to: PAAYFVCCHQDLFCG*ILIEVELMCYICSI Trigger: TATGGAGCAAATGTAACACATGAGTTCAACCTCAATAAGTATTCATCCACAGAAGAGGTCCTGGTGGCAGCAAACAAAATAGGCCGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | CTCCTTTGTGGACCGGCTCTAGAATTCAGAATCTCCAAAGTGTTTCAGACACTGTTGTTCCCACAGTCTTaGGCAAAAGGAATATGTCCA | + |
Preference number: 5 (lower is better) Translates to: LLCGPALEFRISKVFQTLLFPQS*AKGICP Trigger: TGGACATATTCCTTTTGCCAAAGACTGTGGGAACAA...CAGTGTCTGAAACACTTTGGAGATTCTGAATTCTAGAGCCGGTCCACAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 90 bp | TTCGTTTTCATACTGTTGAACGGTGTATCCAAACATGTCCTCCACTaGACCACTGAAGCTCATGGAGTTTTTGACATCAACGTTGAAGGA | + |
Preference number: 5 (lower is better) Translates to: FVFILLNGVSKHVLH*TTEAHGVFDINVEG Trigger: TCCTTCAACGTTGATGTCAAAAACTCCATGAGCTTCAGTGGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTATGAAAACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTGGTTCCAGGCTCATTaGATATTCAAACCTCGTCTG | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTWFQAH*IFKPRL Trigger: CAGACGAGGTTTGAATATCAAATGAGCCTGGAACCA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTTTAAAGCCATCCACGTaGAGGTCTTTTACAGCAGCA | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTLKPST*RSFTAA Trigger: TGCTGCTGTAAAAGACCTCAACGTGGATGGCTTTAA...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | CTCATGGGGTGGGGGTGGAGTTTGCAGTATGCAAGCAACAATGTAAACAAACAGACGGCAGTTTTTCTTTaGAATATTCACTTTGTTGGG | + |
Preference number: 5 (lower is better) Translates to: LMGWGWSLQYASNNVNKQTAVFL*NIHFVG Trigger: CCCAACAAAGTGAATATTCAAAAGAAAAACTGCCGT...CTGTTTGTTTACATTGTTGCTTGCATACTGCAAACTCCACCCCCACCCCATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACATGCATACTGTTTCTTaGCCCTCCACACGGCAGTTT | + |
Preference number: 5 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHMHTVS*PSTRQF Trigger: AAACTGCCGTGTGGAGGGCAAAGAAACAGTATGCAT...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTAGGCTGACATTGAACTaGTCATTCTGGGATCTGACA | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTRLTLN*SFWDLT Trigger: TGTCAGATCCCAGAATGACAAGTTCAATGTCAGCCT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TGGCTGAGGATAGAGAATGTAGAATACTTAAGAGCAGTAGCCGAAGGTCTAACTATTTTCTTCCCAGAGTaGATACCCAAAGGGTCCTCA | + |
Preference number: 5 (lower is better) Translates to: WLRIENVEYLRAVAEGLTIFFPE*IPKGSS Trigger: TGAGGACCCTTTGGGTATCAACTCTGGGAAGAAAAT...AGTTAGACCTTCGGCTACTGCTCTTAAGTATTCTACATTCTCTATCCTCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACAATCCTCCCTTCGGATaGGTGACTAAAGTTGATCCA | + |
Preference number: 5 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHNPPFG*VTKVDP Trigger: TGGATCAACTTTAGTCACCAATCCGAAGGGAGGATT...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGACGGTGAGGCTGACATaGAACTTGTCATTCTGGGAT | + |
Preference number: 5 (lower is better) Translates to: SILYMSLAKESFSHLNWETVRLT*NLSFWD Trigger: ATCCCAGAATGACAAGTTCAATGTCAGCCTCACCGT...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGTTTCGGTGGGCTCACTaGCGATTGATTTTATCTCCT | + |
Preference number: 5 (lower is better) Translates to: SILYMSLAKESFSHLNWEFRWAH*RLILSP Trigger: AGGAGATAAAATCAATCGCAAGTGAGCCCACCGAAA...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TATTGGGTCATCTATGTATGCTCATGTTTCATTAAGAAACCCTCTGGGCATCACTTCGTTTTCATACTGTaGAACGGTGTATCCAAACAT | + |
Preference number: 5 (lower is better) Translates to: YWVIYVCSCFIKKPSGHHFVFIL*NGVSKH Trigger: ATGTTTGGATACACCGTTCAACAGTATGAAAACGAA...GTGATGCCCAGAGGGTTTCTTAATGAAACATGAGCATACATAGATGACCCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGCCTCAGACTTTGATATaGTCATTTTCTTCCCAGAGT | + |
Preference number: 5 (lower is better) Translates to: SILYMSLAKESFSHLNWEPQTLI*SFSSQS Trigger: ACTCTGGGAAGAAAATGACAATATCAAAGTCTGAGG...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGTTCTTTAGTGGCCTTTaGAAGAATCCAATCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: SILYMSLAKESFSHLNWEFFSGL*KNPIFH Trigger: GTGGAAGATTGGATTCTTCAAAAGGCCACTAAAGAA...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS-3UTR CAA 90 bp | TCCATATTGTATATGAGCTTGGCTAAGGAAAGTTTTTCTCATTTGAACTGGGAGGTGGATGAATACTTATaGAGGTTGAACTCATGTGTT | + |
Preference number: 5 (lower is better) Translates to: SILYMSLAKESFSHLNWEVDEYL*RLNSCV Trigger: AACACATGAGTTCAACCTCAATAAGTATTCATCCAC...CTCCCAGTTCAAATGAGAAAAACTTTCCTTAGCCAAGCTCATATACAATATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GGCGCTCAGGAGGATAACCCACAGCGGCACTCGGCCTaGGAGCCCGTCTTTGGATATCTGAATAGCCAGCTC | + |
Preference number: 6 (lower is better) Translates to: GAQEDNPQRHSA*EPVFGYLNSQL Trigger: GAGCTGGCTATTCAGATATCCAAAGACGGGCTCCCAGGCCGAGTGCCGCTGTGGGTTATCCTCCTGAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | TTCCTGGCTGTGTCTATTCCAAGGGCTGTCATCGTCTaGAGACCACCCCTGCGGCCTATTTTGTTTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: FLAVSIPRAVIV*RPPLRPILFAA Trigger: GGCAGCAAACAAAATAGGCCGCAGGGGTGGTCTCCAGACGATGACAGCCCTTGGAATAGACACAGCCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | TGGCCCAGAAGAGGGCAGCTCCTCCAAGGCCTCCAATaGTCACGTCAGTCAGACCATCGCCATTTAAATCCA | + |
Preference number: 6 (lower is better) Translates to: WPRRGQLLQGLQ*SRQSDHRHLNP Trigger: TGGATTTAAATGGCGATGGTCTGACTGACGTGACCATTGGAGGCCTTGGAGGAGCTGCCCTCTTCTGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GAGGCTGCCCAGCGATATAGAGCACATCTCCCGGGATaGTGGCAGAGTTCACTGTGTAACCCAAGTAAGAAG | + |
Preference number: 6 (lower is better) Translates to: EAAQRYRAHLPG*WQSSLCNPSKK Trigger: CTTCTTACTTGGGTTACACAGTGAACTCTGCCACCATCCCGGGAGATGTGCTCTATATCGCTGGGCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GCTGCCCAGCGATATAGAGCACATCTCCCGGGATGGTaGCAGAGTTCACTGTGTAACCCAAGTAAGAAGCAA | + |
Preference number: 6 (lower is better) Translates to: AAQRYRAHLPGW*QSSLCNPSKKQ Trigger: TTGCTTCTTACTTGGGTTACACAGTGAACTCTGCCACCATCCCGGGAGATGTGCTCTATATCGCTGGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | TCATCGTCTGGAGACCACCCCTGCGGCCTATTTTGTTaGCTGCCACCAGGACCTCTTCTGTGGATGAATACT | + |
Preference number: 6 (lower is better) Translates to: SSSGDHPCGLFC*LPPGPLLWMNT Trigger: AGTATTCATCCACAGAAGAGGTCCTGGTGGCAGCAAACAAAATAGGCCGCAGGGGTGGTCTCCAGACGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | AAAAGCTCCGTGATATCTGCCTCAGCGAATCAAGGGTaGCACGGTACTGCAGATCAGCCTCGTAAACTGAGT | + |
Preference number: 6 (lower is better) Translates to: KSSVISASANQG*HGTADQPRKLS Trigger: ACTCAGTTTACGAGGCTGATCTGCAGTACCGTGTCACCCTTGATTCGCTGAGGCAGATATCACGGAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS GCA 72 bp | TGCGTTGCGCATACTCTTTCCTTATGGTCTTGCCACTaGCATGATAAATGTACACAGCTCCTGCGTGGTCGT | + |
Preference number: 6 (lower is better) Translates to: CVAHTLSLWSCH*HDKCTQLLRGR Trigger: ACGACCACGCAGGAGCTGTGTACATTTATCATGGCAGTGGCAAGACCATAAGGAAAGAGTATGCGCAACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GTTTGGCAGAGCGTCATCGAGCACGGGCCCATTTTCTaGATCAGTGAGGTTAAAATCCAAAGTCACTCTCAC | + |
Preference number: 6 (lower is better) Translates to: VWQSVIEHGPIF*ISEVKIQSHSH Trigger: GTGAGAGTGACTTTGGATTTTAACCTCACTGATCCAGAAAATGGGCCCGTGCTCGATGACGCTCTGCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | AGTCTTTGGCAAAAGGAATATGTCCATGGACTGAGTTaGGCAGAGCGTCATCGAGCACGGGCCCATTTTCTG | + |
Preference number: 6 (lower is better) Translates to: SLWQKEYVHGLS*AERHRARAHFL Trigger: CAGAAAATGGGCCCGTGCTCGATGACGCTCTGCCAAACTCAGTCCATGGACATATTCCTTTTGCCAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | CAGGATAGCCATCTGACGTCAGATTGGGAAATGAAATaGCCAGCCGAAGTTCTGGCATTGGGAAATGCCCTC | + |
Preference number: 6 (lower is better) Translates to: QDSHLTSDWEMK*PAEVLALGNAL Trigger: GAGGGCATTTCCCAATGCCAGAACTTCGGCTGGCAATTTCATTTCCCAATCTGACGTCAGATGGCTATCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | TCCAGGGTGAGGTCTGAAACGCATCTTTCCTTGTTCCCACAGTCTTaGGCAAAAGGAATATGTCCATGGACTGAGTTTGGCAGAGCGTCA | + |
Preference number: 6 (lower is better) Translates to: SRVRSETHLSLFPQS*AKGICPWTEFGRAS Trigger: TGACGCTCTGCCAAACTCAGTCCATGGACATATTCCTTTTGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACCTCACCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | CAGAGCTTTAACAATAGTGACCAGGGCCAACTCATCTaGGACGTTGAAGAAGTGCTTTTCGGTGGGCTCACT | + |
Preference number: 6 (lower is better) Translates to: QSFNNSDQGQLI*DVEEVLFGGLT Trigger: AGTGAGCCCACCGAAAAGCACTTCTTCAACGTCTCAGATGAGTTGGCCCTGGTCACTATTGTTAAAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | GTTCTTTTCTGTTGTGGACACATCCAGGGTGAGGTCTaGAACGCATCTTTCCTTGTTCCCACAGTCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: VLFCCGHIQGEV*NASFLVPTVFG Trigger: GCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACCTCACCCTGGATGTGTCCACAACAGAAAAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | TCAGCAGGTTCTTTTCTGTTGTGGACACATCCAGGGTaGGGTCTGAAACGCATCTTTCCTTGTTCCCACAGT | + |
Preference number: 6 (lower is better) Translates to: SAGSFLLWTHPG*GLKRIFPCSHS Trigger: ACTGTGGGAACAAGGAAAGATGCGTTTCAGACCTCACCCTGGATGTGTCCACAACAGAAAAGAACCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS GCA 72 bp | GTGACCAGGGCCAACTCATCTGAGACGTTGAAGAAGTaGTTTTCGGTGGGCTCACTTGCGATTGATTTTATC | + |
Preference number: 6 (lower is better) Translates to: VTRANSSETLKK*FSVGSLAIDFI Trigger: GATAAAATCAATCGCAAGTGAGCCCACCGAAAAGCACTTCTTCAACGTCTCAGATGAGTTGGCCCTGGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | CACCTGAGGGAATGCGTTGCGCATACTCTTTCCTTATaGTCTTGCCACTGCCATGATAAATGTACACAGCTC | + |
Preference number: 6 (lower is better) Translates to: HLRECVAHTLSL*SCHCHDKCTQL Trigger: GAGCTGTGTACATTTATCATGGCAGTGGCAAGACCATAAGGAAAGAGTATGCGCAACGCATTCCCTCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | GCACTGTCTCCCTTGTTTTTGACGGTGAGGCTGACATaGAACTTGTCATTCTGGGATCTGACAATCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: ALSPLFLTVRLT*NLSFWDLTISR Trigger: CCTGCTGATTGTCAGATCCCAGAATGACAAGTTCAATGTCAGCCTCACCGTCAAAAACAAGGGAGACAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | TATCCAAACATGTCCTCCACTGGACCACTGAAGCTCATGGAGTTTTaGACATCAACGTTGAAGGAGATGCAGACGCCTAGGATAACGGTG | + |
Preference number: 6 (lower is better) Translates to: YPNMSSTGPLKLMEF*TSTLKEMQTPRITV Trigger: CACCGTTATCCTAGGCGTCTGCATCTCCTTCAACGTTGATGTCAAAAACTCCATGAGCTTCAGTGGTCCAGTGGAGGACATGTTTGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | TCTGTTGTGGACACATCCAGGGTGAGGTCTGAAACGCATCTTTCCTaGTTCCCACAGTCTTTGGCAAAAGGAATATGTCCATGGACTGAG | + |
Preference number: 6 (lower is better) Translates to: SVVDTSRVRSETHLS*FPQSLAKGICPWTE Trigger: CTCAGTCCATGGACATATTCCTTTTGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACCTCACCCTGGATGTGTCCACAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | GGCTTCGAGGTCTGCAGTTTACATTATCAGAAGATGACCATCCAGTaGGGTACAGTACAGGATAGCCATCTGACGTCAGATTGGGAAATG | + |
Preference number: 6 (lower is better) Translates to: GFEVCSLHYQKMTIQ*GTVQDSHLTSDWEM Trigger: CATTTCCCAATCTGACGTCAGATGGCTATCCTGTACTGTACCCAACTGGATGGTCATCTTCTGATAATGTAAACTGCAGACCTCGAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | TGTAACCCAAGTAAGAAGCAAGAGGCTCGTTCATCTTaGTGGGCTCAGTTTGAAAGGTGGTGTTATGAGGGA | + |
Preference number: 6 (lower is better) Translates to: CNPSKKQEARSS*WAQFERWCYEG Trigger: TCCCTCATAACACCACCTTTCAAACTGAGCCCACCAAGATGAACGAGCCTCTTGCTTCTTACTTGGGTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | TTGGGTACAGTACAGGATAGCCATCTGACGTCAGATTaGGAAATGAAATTGCCAGCCGAAGTTCTGGCATTG | + |
Preference number: 6 (lower is better) Translates to: LGTVQDSHLTSD*EMKLPAEVLAL Trigger: CAATGCCAGAACTTCGGCTGGCAATTTCATTTCCCAATCTGACGTCAGATGGCTATCCTGTACTGTACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | CACGTGATGGTAGCAATCTTGCAGGTACTGCAGTCCTaGATTGTGCCTCTTTTGAGAACCTCAGACTTTGAT | + |
Preference number: 6 (lower is better) Translates to: HVMVAILQVLQS*IVPLLRTSDFD Trigger: ATCAAAGTCTGAGGTTCTCAAAAGAGGCACAATCCAGGACTGCAGTACCTGCAAGATTGCTACCATCACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | TTAACAATAGTGACCAGGGCCAACTCATCTGAGACGTaGAAGAAGTGCTTTTCGGTGGGCTCACTTGCGATT | + |
Preference number: 6 (lower is better) Translates to: LTIVTRANSSET*KKCFSVGSLAI Trigger: AATCGCAAGTGAGCCCACCGAAAAGCACTTCTTCAACGTCTCAGATGAGTTGGCCCTGGTCACTATTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | AGAAGCAAGAGGCTCGTTCATCTTGGTGGGCTCAGTTaGAAAGGTGGTGTTATGAGGGATGACAATCTGGTT | + |
Preference number: 6 (lower is better) Translates to: RSKRLVHLGGLS*KGGVMRDDNLV Trigger: AACCAGATTGTCATCCCTCATAACACCACCTTTCAAACTGAGCCCACCAAGATGAACGAGCCTCTTGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | GACACATCCAGGGTGAGGTCTGAAACGCATCTTTCCTaGTTCCCACAGTCTTTGGCAAAAGGAATATGTCCA | + |
Preference number: 6 (lower is better) Translates to: DTSRVRSETHLS*FPQSLAKGICP Trigger: TGGACATATTCCTTTTGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACCTCACCCTGGATGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | GTGTTGTACGCACTGTCTCCCTTGTTTTTGACGGTGAGGCTGACATaGAACTTGTCATTCTGGGATCTGACAATCAGCAGGTTCTTTTCT | + |
Preference number: 6 (lower is better) Translates to: VLYALSPLFLTVRLT*NLSFWDLTISRFFS Trigger: AGAAAAGAACCTGCTGATTGTCAGATCCCAGAATGACAAGTTCAATGTCAGCCTCACCGTCAAAAACAAGGGAGACAGTGCGTACAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | CTACATTCTTGTACAGGGGCGAACGAGTTCACAACTTaGAATGTAGGGCTGACATCAGAACATATGCCAGTC | + |
Preference number: 6 (lower is better) Translates to: LHSCTGANEFTT*NVGLTSEHMPV Trigger: GACTGGCATATGTTCTGATGTCAGCCCTACATTTCAAGTTGTGAACTCGTTCGCCCCTGTACAAGAATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GGTCTGAAACGCATCTTTCCTTGTTCCCACAGTCTTTaGCAAAAGGAATATGTCCATGGACTGAGTTTGGCA | + |
Preference number: 6 (lower is better) Translates to: GLKRIFPCSHSL*QKEYVHGLSLA Trigger: TGCCAAACTCAGTCCATGGACATATTCCTTTTGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | GCTACATTCTTGTACAGGGGCGAACGAGTTCACAACTaGAAATGTAGGGCTGACATCAGAACATATGCCAGT | + |
Preference number: 6 (lower is better) Translates to: ATFLYRGERVHN*KCRADIRTYAS Trigger: ACTGGCATATGTTCTGATGTCAGCCCTACATTTCAAGTTGTGAACTCGTTCGCCCCTGTACAAGAATGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | AGGTCTGAAACGCATCTTTCCTTGTTCCCACAGTCTTaGGCAAAAGGAATATGTCCATGGACTGAGTTTGGC | + |
Preference number: 6 (lower is better) Translates to: RSETHLSLFPQS*AKGICPWTEFG Trigger: GCCAAACTCAGTCCATGGACATATTCCTTTTGCCAAAGACTGTGGGAACAAGGAAAGATGCGTTTCAGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | AGGAGAACCAATAAGAACCCATTTGCCTTCTTCGTTTTCATACTGTaGAACGGTGTATCCAAACATGTCCTCCACTGGACCACTGAAGCT | + |
Preference number: 6 (lower is better) Translates to: RRTNKNPFAFFVFIL*NGVSKHVLHWTTEA Trigger: AGCTTCAGTGGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTATGAAAACGAAGAAGGCAAATGGGTTCTTATTGGTTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | AAGCTGTGTGCTACATTCTTGTACAGGGGCGAACGAGTTCACAACTaGAAATGTAGGGCTGACATCAGAACATATGCCAGTCGTATAATG | + |
Preference number: 6 (lower is better) Translates to: KLCATFLYRGERVHN*KCRADIRTYASRIM Trigger: CATTATACGACTGGCATATGTTCTGATGTCAGCCCTACATTTCAAGTTGTGAACTCGTTCGCCCCTGTACAAGAATGTAGCACACAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | ATACTGTTGAACGGTGTATCCAAACATGTCCTCCACTaGACCACTGAAGCTCATGGAGTTTTTGACATCAAC | + |
Preference number: 6 (lower is better) Translates to: ILLNGVSKHVLH*TTEAHGVFDIN Trigger: GTTGATGTCAAAAACTCCATGAGCTTCAGTGGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | TCTCCCTTGTTTTTGACGGTGAGGCTGACATTGAACTaGTCATTCTGGGATCTGACAATCAGCAGGTTCTTT | + |
Preference number: 6 (lower is better) Translates to: SPLFLTVRLTLN*SFWDLTISRFF Trigger: AAAGAACCTGCTGATTGTCAGATCCCAGAATGACAAGTTCAATGTCAGCCTCACCGTCAAAAACAAGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | GTCTGCAGTTTACATTATCAGAAGATGACCATCCAGTaGGGTACAGTACAGGATAGCCATCTGACGTCAGAT | + |
Preference number: 6 (lower is better) Translates to: VCSLHYQKMTIQ*GTVQDSHLTSD Trigger: ATCTGACGTCAGATGGCTATCCTGTACTGTACCCAACTGGATGGTCATCTTCTGATAATGTAAACTGCAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | CTTTTGAGAACCTCAGACTTTGATATTGTCATTTTCTTCCCAGAGTaGATACCCAAAGGGTCCTCAAGGCTTCGAGGTCTGCAGTTTACA | + |
Preference number: 6 (lower is better) Translates to: LLRTSDFDIVIFFPE*IPKGSSRLRGLQFT Trigger: TGTAAACTGCAGACCTCGAAGCCTTGAGGACCCTTTGGGTATCAACTCTGGGAAGAAAATGACAATATCAAAGTCTGAGGTTCTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | ATGGTAGCAATCTTGCAGGTACTGCAGTCCTGGATTGTGCCTCTTTaGAGAACCTCAGACTTTGATATTGTCATTTTCTTCCCAGAGTTG | + |
Preference number: 6 (lower is better) Translates to: MVAILQVLQSWIVPL*RTSDFDIVIFFPEL Trigger: CAACTCTGGGAAGAAAATGACAATATCAAAGTCTGAGGTTCTCAAAAGAGGCACAATCCAGGACTGCAGTACCTGCAAGATTGCTACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | ATAAGAACCCATTTGCCTTCTTCGTTTTCATACTGTTaGACGGTGTATCCAAACATGTCCTCCACTGGACCA | + |
Preference number: 6 (lower is better) Translates to: IRTHLPSSFSYC*TVYPNMSSTGP Trigger: TGGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTATGAAAACGAAGAAGGCAAATGGGTTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | AAAATCGCTGAATGTTTTCATCCTCACAGTCTTGGATaGCCTGTTTCAGGCGATAGTTGTCATGCGATTCTC | + |
Preference number: 6 (lower is better) Translates to: KIAECFHPHSLG*PVSGDSCHAIL Trigger: GAGAATCGCATGACAACTATCGCCTGAAACAGGTCATCCAAGACTGTGAGGATGAAAACATTCAGCGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | ATTAATCAGCTCAGGAACAGTCTCATTGGCAGCAACTaGAATGTGGTGTTCACTCGCAGAACTGTAAAACTG | + |
Preference number: 6 (lower is better) Translates to: INQLRNSLIGSN*NVVFTRRTVKL Trigger: CAGTTTTACAGTTCTGCGAGTGAACACCACATTTCAGTTGCTGCCAATGAGACTGTTCCTGAGCTGATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | TTGCTGCTGCTTAAAGTCAGCGATGAGTTTTCACTCTaGAGTTCTCCCCGTATGGTAAGATTTAAGCTGGAA | + |
Preference number: 6 (lower is better) Translates to: LLLLKVSDEFSL*SSPRMVRFKLE Trigger: TTCCAGCTTAAATCTTACCATACGGGGAGAACTTCAGAGTGAAAACTCATCGCTGACTTTAAGCAGCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CCA 72 bp | GCAGATCAGTGTAAGAATCTTTGTCGATGTCAATTGTaGTTAAGACGCTACCAAAGTAGGATCCGATCTGCT | + |
Preference number: 6 (lower is better) Translates to: ADQCKNLCRCQL*LRRYQSRIRSA Trigger: AGCAGATCGGATCCTACTTTGGTAGCGTCTTAACCACAATTGACATCGACAAAGATTCTTACACTGATCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | AATAAGAACCCATTTGCCTTCTTCGTTTTCATACTGTaGAACGGTGTATCCAAACATGTCCTCCACTGGACC | + |
Preference number: 6 (lower is better) Translates to: NKNPFAFFVFIL*NGVSKHVLHWT Trigger: GGTCCAGTGGAGGACATGTTTGGATACACCGTTCAACAGTATGAAAACGAAGAAGGCAAATGGGTTCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | AAGGGTGACACGGTACTGCAGATCAGCCTCGTAAACTaGGTCTTCTTTAGACTTCAATTTCACATGAAAACA | + |
Preference number: 6 (lower is better) Translates to: KGDTVLQISLVN*VFFRLQFHMKT Trigger: TGTTTTCATGTGAAATTGAAGTCTAAAGAAGACTCAGTTTACGAGGCTGATCTGCAGTACCGTGTCACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | ATCTTGCAGGTACTGCAGTCCTGGATTGTGCCTCTTTaGAGAACCTCAGACTTTGATATTGTCATTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: ILQVLQSWIVPL*RTSDFDIVIFF Trigger: GAAGAAAATGACAATATCAAAGTCTGAGGTTCTCAAAAGAGGCACAATCCAGGACTGCAGTACCTGCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 72 bp | ATTGAGGTTGAACTCATGTGTTACATTTGCTCCATATaGTACAATTCCAACCTGTGTCTGTTTGGGGCCAAT | + |
Preference number: 6 (lower is better) Translates to: IEVELMCYICSI*YNSNLCLFGAN Trigger: ATTGGCCCCAAACAGACACAGGTTGGAATTGTACAATATGGAGCAAATGTAACACATGAGTTCAACCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS TCA 72 bp | TATTTTGTTTGCTGCCACCAGGACCTCTTCTGTGGATaGATACTTATTGAGGTTGAACTCATGTGTTACATT | + |
Preference number: 6 (lower is better) Translates to: YFVCCHQDLFCG*ILIEVELMCYI Trigger: AATGTAACACATGAGTTCAACCTCAATAAGTATTCATCCACAGAAGAGGTCCTGGTGGCAGCAAACAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | ATTTATGCATACTGTTTCTTTGCCCTCCACACGGCAGTTTTTCTTTaGAATATTCACTTTGTTGGGTTCAAAATTCATGGTCACTTTAAC | + |
Preference number: 6 (lower is better) Translates to: IYAYCFFALHTAVFL*NIHFVGFKIHGHFN Trigger: GTTAAAGTGACCATGAATTTTGAACCCAACAAAGTGAATATTCAAAAGAAAAACTGCCGTGTGGAGGGCAAAGAAACAGTATGCATAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |
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CDS CAA 90 bp | ATTGCATTTTCTGAGAGATGTGATGTATTAAACTGGAATATTATTTaGAAGTTAACCACGTCTCCTGTCCTCAGGAAAGGATATCCAACT | + |
Preference number: 6 (lower is better) Translates to: IAFSERCDVLNWNII*KLTTSPVLRKGYPT Trigger: AGTTGGATATCCTTTCCTGAGGACAGGAGACGTGGTTAACTTCAAAATAATATTCCAGTTTAATACATCACATCTCTCAGAAAATGCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061673.9 |