Pregenerated sensors for ITFG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031703Ensembl transcript IDs: ENSMUST00000034140.9
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACAGACCTTTCCCGTCTTTTGAGACAGAACTGTATGGCATGCTaGCACCTGAAGAGTTTGCCTCTATCAGCTTTCTTTCAAGAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: GTDLSRLLRQNCMAC*HLKSLPLSAFFQES Trigger: GCTCTCTTGAAAGAAAGCTGATAGAGGCAAACTCTTCAGGTGCCAGCATGCCATACAGTTCTGTCTCAAAAGACGGGAAAGGTCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR TCA 90 bp | CATGACAGCAGCTGCTTGACGAGTGCTTTCTGTATGCTCAGACACTaGGCTAAGTACATCATGTACATCATACAATGTATGCTCATGACA | + |
|
Preference number: 1 (lower is better) Translates to: HDSSCLTSAFCMLRH*AKYIMYIIQCMLMT Trigger: TGTCATGAGCATACATTGTATGATGTACATGATGTACTTAGCTCAGTGTCTGAGCATACAGAAAGCACTCGTCAAGCAGCTGCTGTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCGATACACCAAGTACATaGAACACATTCCACAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NKITYSSNHDSSCLTSAFDTPST*NTFHKG Trigger: TCCTTTGTGGAATGTGTTGCATGTACTTGGTGTATC...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR-3UTR CCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCTATGATTCCAAAGCCTaGCTATTTAGTTTCATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NKITYSSNHDSSCLTSAFYDSKA*LFSFIL Trigger: CAGAATGAAACTAAATAGCCAGGCTTTGGAATCATA...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR TCA 72 bp | AGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTaGCGAGTGCTTTCTGTATGCTCAGACACTGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RSPTVAIMTAAA*RVLSVCSDTEL Trigger: TAGCTCAGTGTCTGAGCATACAGAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR CCA 72 bp | CTTTCCCGTCTTTTGAGACAGAACTGTATGGCATGCTaGCACCTGAAGAGTTTGCCTCTATCAGCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSRLLRQNCMAC*HLKSLPLSAFF Trigger: AAAGAAAGCTGATAGAGGCAAACTCTTCAGGTGCCAGCATGCCATACAGTTCTGTCTCAAAAGACGGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| 3UTR TCA 72 bp | AGCTGCTTGACGAGTGCTTTCTGTATGCTCAGACACTaGGCTAAGTACATCATGTACATCATACAATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: SCLTSAFCMLRH*AKYIMYIIQCM Trigger: CATACATTGTATGATGTACATGATGTACTTAGCTCAGTGTCTGAGCATACAGAAAGCACTCGTCAAGCAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCTCGGCCGTGACGTTGTaGAGAGCCCGCGCCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFSAVTL*RARAGA Trigger: TGCCCCGGCGCGGGCTCTGCACAACGTCACGGCCGA...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCCGAAGGCCGCCAGGGTaGCCCAGGCCTCAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFRRPPG*PRPQPQ Trigger: TTGGGGCTGAGGCCTGGGGCACCCTGGCGGCCTTCG...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCCAAAGAGCTCGGCCGTaGCGTTGTGCAGAGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFQRARP*RCAEPA Trigger: CGCGGGCTCTGCACAACGTCACGGCCGAGCTCTTTG...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTAGTGTGCTGACTGGCTaGGCTGTCCAGCTGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSSVLTG*AVQLSR Trigger: ACGGCTCAGCTGGACAGCTCAGCCAGTCAGCACACT...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTTCTGTTTGTCGGAGTTaGGGTCACCGAAGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSSVCRS*GHRRPP Trigger: TGGCGGCCTTCGGTGACCTCAACTCCGACAAACAGA...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAAAAGTCTGCAAATGCTaGCTGTCCAACCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLKVCKC*LSNHHQ Trigger: CTGGTGGTGGTTGGACAGTCAGCATTTGCAGACTTT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCCGCAGCTCGCATTATTaGATGGGACGTTCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFRSSHY*MGRSPV Trigger: TACTGGAGAACGTCCCATGCAATAATGCGAGCTGCG...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTATTTGGGGAAAGTATGTaGGCAGGACATCCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLFGESM*AGHPFV Trigger: CACAAATGGATGTCCTGCTCACATACTTTCCCCAAA...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACCAGCCTGGCAGCAAGTaGTCCATGTGTCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHQPGSK*SMCPSP Trigger: TGGAGATGGACACATGGATCACTTGCTGCCAGGCTG...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACGCTAAGTGTGCTGACTaGCTGAGCTGTCCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHAKCAD*LSCPAE Trigger: CTCAGCTGGACAGCTCAGCCAGTCAGCACACTTAGC...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCCTTCGAGGGACATTGTaGGGATATGGAATGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFLRGTL*GYGMTI Trigger: GATTGTCATTCCATATCCTCACAATGTCCCTCGAAG...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAAGCAGTATCTGCGGTTaGCTGGATTCATTTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLSSICG*LDSFVI Trigger: TATCACAAATGAATCCAGCCAACCGCAGATACTGCT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCTTCTTCATGCACAAATaGCACAAAGCCCCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFFFMHK*HKAPEC Trigger: ACACTCTGGGGCTTTGTGCCATTTGTGCATGAAGAA...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAGACATTGTGAGGATATaGAATGACAATCAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLDIVRI*NDNQLG Trigger: TCCCAGCTGATTGTCATTCCATATCCTCACAATGTC...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAAGTTCACTGTTGGTATaGTTTTGGGGAAAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLSSLLV*FWGKYV Trigger: CACATACTTTCCCCAAAATCATACCAACAGTGAACT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAATCAGTGGTTGGTCATaGAAAGTCCTATTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLISGWS*KVLLSM Trigger: CATACTCAATAGGACTTTTCATGACCAACCACTGAT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCTTATTGCTAAAATCCTaGAGCACAGGAACCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFLLLKS*STGTHC Trigger: ACAGTGGGTTCCTGTGCTTCAGGATTTTAGCAATAA...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTCTCCAATGTGAAGTGTaGGTGGGATTGGTATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSLQCEV*VGLVLW Trigger: CCACAATACCAATCCCACTCACACTTCACATTGGAG...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCGGGTTTAAAATAGGGTaGACTCTGATCTGCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFGFKIG*TLICQE Trigger: TTCTTGGCAGATCAGAGTGCACCCTATTTTAAACCC...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTGTGGTCAAGGCAGGATaGCATGATAAATCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSVVKAG*HDKSPP Trigger: AGGAGGAGATTTATCATGGCATCCTGCCTTGACCAC...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTATCGGCTTTCTTTTCCTaGCAATGTAAAATGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLSAFFS*QCKMAI Trigger: AATCGCCATTTTACATTGGCAGGAAAAGAAAGCCGA...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTCTTATCTTCACAGCCTaGCAGCAAGTGATCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSLIFTA*QQVIHV Trigger: CACATGGATCACTTGCTGCCAGGCTGTGAAGATAAG...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACCCTCCTAGCAGTATCTaGGGTTGGCTGGATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHPPSSI*GWLDSF Trigger: AAATGAATCCAGCCAACCGCAGATACTGCTAGGAGG...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAAGATCAATAAATGCATaGGAATGTGGATCTCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLRSINA*ECGSRI Trigger: AATGCGAGATCCACATTCCCATGCATTTATTGATCT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAGATTGGTATTGTGGTTaGTTGTTCTTCATGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQASKASCPPMIPKPGYLDWYCG*LFFMHK Trigger: TTTGTGCATGAAGAACAACCAACCACAATACCAATC...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTTGTGAGGATATGGAATaGCAATCAGCTGGGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSCEDME*QSAGNL Trigger: CAAATTCCCAGCTGATTGTCATTCCATATCCTCACA...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCAAAAGGCTTGCTGATTaGTTCCAGATGTATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFKRLAD*FQMYSS Trigger: TGAAGAATACATCTGGAAGCAATCAGCAAGCCTTTT...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACACTTTAAACATCCGATaGACTTCTTCGCAGCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHTLNIR*TSSQLA Trigger: TGCGAGCTGCGAAGAAGTGCATCGGATGTTTAAAGT...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCAAATGCATGGGAATGTaGATCTCGCATTTTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKITYSSNHDSSCLTSAFKCMGM*ISHFTL Trigger: AAGAGTAAAATGCGAGATCCACATTCCCATGCATTT...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACTCCCATATCTCAAACTaGAAGGCATTAGAGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHSHISN*KALEAV Trigger: GACTGCCTCTAATGCCTTCCAGTTTGAGATATGGGA...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTAATCAGCTGGGAATTTaGAATGATTGCTGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSNQLGI*NDCCPL Trigger: GAGTGGACAGCAATCATTCCAAATTCCCAGCTGATT...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTAGTAAAAAGGCTTGCTaGTTGCTTCCAGATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSSKKAC*LLPDVF Trigger: GAATACATCTGGAAGCAATCAGCAAGCCTTTTTACT...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACCACATAGCATCAAAATaGAACCGATGTGCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHHIASK*NRCASC Trigger: ACAGGAAGCACATCGGTTTCATTTTGATGCTATGTG...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTAGTCAGATCAATAAATaGATGGGAATGTGGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSSQINK*MGMWIS Trigger: CGAGATCCACATTCCCATGCATTTATTGATCTGACT...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACGTGGGATTGGTATTGTaGTTGGTTGTTCTTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHVGLVL*LVVLHA Trigger: TGCATGAAGAACAACCAACCACAATACCAATCCCAC...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACTATATGGCACTTTTCTaGCAGTCCTTATCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHYMALF*QSLSSQ Trigger: CTGTGAAGATAAGGACTGTCAGAAAAGTGCCATATA...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACCTCCTAGTTCACTGTTaGTATGATTTTGGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHLLVHC*YDFGES Trigger: ACTTTCCCCAAAATCATACCAACAGTGAACTAGGAG...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACATACCAACAAAAAGATaGTCCAGGAAATTGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHIPTKR*SRKLAL Trigger: AAGTGCCAATTTCCTGGATCATCTTTTTGTTGGTAT...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACAAAATGAAACCGATGTaGTTCCTGTCGTTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHKMKPM*FLSFFS Trigger: AGAGAAAAACGACAGGAAGCACATCGGTTTCATTTT...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACTTTTCAAAGACACTATaGATAGAGAAGTTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: MSSLICSEECYLNNFIWHFSKTL*IEKFPP Trigger: GGGTGGAAACTTCTCTATCCATAGTGTCTTTGAAAA...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACAGCTCGGCCGTGACGTaGTGCAGAGCCCGCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: MSSLICSEECYLNNFIWHSSAVT*CRARAG Trigger: CCCGGCGCGGGCTCTGCACAACGTCACGGCCGAGCT...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAAAGAGGTCCGTCTGTTaGTCGGAGTTGAGGTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: NQASKASCPPMIPKPGYLKRSVC*SELRSP Trigger: CGGTGACCTCAACTCCGACAAACAGACGGACCTCTT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS GCA 90 bp | TGGGAATGTGGATCTCGCATTTTACTCTTAGTGGTCAAGGCAGGATaGCATGATAAATCTCCTCCTAGCAGTATCTGCGGTTGGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WECGSRILLLVVKAG*HDKSPPSSICGWLD Trigger: ATCCAGCCAACCGCAGATACTGCTAGGAGGAGATTTATCATGGCATCCTGCCTTGACCACTAAGAGTAAAATGCGAGATCCACATTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | AATAAGATCACCTACAGTAGCAATCATGACAGCAGCTGCTTGACGAGTGCTTTCTCGCAGCTCGCATTATaGCATGGGACGTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NKITYSSNHDSSCLTSAFSQLAL*HGTFSS Trigger: ACTGGAGAACGTCCCATGCAATAATGCGAGCTGCGA...GAAAGCACTCGTCAAGCAGCTGCTGTCATGATTGCTACTGTAGGTGATCTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 90 bp | GAGCATCTGGGTAGCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTaGGTGGGATTGGTATTGTGGTTGGTTGTTCTTCATGCACAAATG | + |
|
Preference number: 5 (lower is better) Translates to: EHLGSRPCCSLQCEV*VGLVLWLVVLHAQM Trigger: CATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATGGACGGCTACCCAGATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | GTTGTAGTCTCCAATGTGAAGTGTGAGTGGGATTGGTATTGTGGTTaGTTGTTCTTCATGCACAAATGGCACAAAGCCCCAGAGTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: VVVSNVKCEWDWYCG*LFFMHKWHKAPECT Trigger: GGTACACTCTGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | GTAGCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTGAGTGGGATTaGTATTGTGGTTGGTTGTTCTTCATGCACAAATGGCACAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAVHVVVSNVKCEWD*YCGWLFFMHKWHKA Trigger: GGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATGGACGGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | ATCTGGGTAGCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTGAGTaGGATTGGTATTGTGGTTGGTTGTTCTTCATGCACAAATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IWVAVHVVVSNVKCE*DWYCGWLFFMHKWH Trigger: GTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATGGACGGCTACCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | CTCCAGATGGACGGGGAATACCAACAAAAAGATGATCCAGGAAATTaGCACTTCGGCCTAAGCCAAGTACATTGTAAGGTAGCTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQMDGEYQQKDDPGN*HFGLSQVHCKVAEE Trigger: CTCTTCAGCTACCTTACAATGTACTTGGCTTAGGCCGAAGTGCCAATTTCCTGGATCATCTTTTTGTTGGTATTCCCCGTCCATCTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 90 bp | CAAGTACATTGTAAGGTAGCTGAAGAGCTAAGTGTGCTGACTGGCTaGGCTGTCCAGCTGAGCCGTTTTTCAGATATCCATTTGCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: QVHCKVAEELSVLTG*AVQLSRFSDIHLHL Trigger: TAGATGCAAATGGATATCTGAAAAACGGCTCAGCTGGACAGCTCAGCCAGTCAGCACACTTAGCTCTTCAGCTACCTTACAATGTACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | TTGCTGATTGCTTCCAGATGTATTCTTCAATATAGCCAGAGCATCTaGGTAGCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLIASRCILQYSQSI*VAVHVVVSNVKCEW Trigger: CCACTCACACTTCACATTGGAGACTACAACATGGACGGCTACCCAGATGCTCTGGCTATATTGAAGAATACATCTGGAAGCAATCAGCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | TGTGAGTGGGATTGGTATTGTGGTTGGTTGTTCTTCATGCACAAATaGCACAAAGCCCCAGAGTGTACCCTTATTGCTAAAATCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CEWDWYCGWLFFMHK*HKAPECTLIAKILK Trigger: CTTCAGGATTTTAGCAATAAGGGTACACTCTGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | AACCAGGCATCTAAGGCAAGCTGTCCTCCTATGATTCCAAAGCCTGGCTATTTAATGGCAACATCATTCTaGGTGTATCCTTTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NQASKASCPPMIPKPGYLMATSF*VYPLLR Trigger: CCTCAGTAAAGGATACACCAAGAATGATGTTGCCAT...TAAATAGCCAGGCTTTGGAATCATAGGAGGACAGCTTGCCTTAGATGCCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 90 bp | ACAAATGGCACAAAGCCCCAGAGTGTACCCTTATTGCTAAAATCCTaGAGCACAGGAACCCACTGTCCTGTTCCAGATCTCATTAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: TNGTKPQSVPLLLKS*STGTHCPVPDLIKY Trigger: ATATTTAATGAGATCTGGAACAGGACAGTGGGTTCCTGTGCTTCAGGATTTTAGCAATAAGGGTACACTCTGGGGCTTTGTGCCATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | AAGGCAGGATGCCATGATAAATCTCCTCCTAGCAGTATCTGCGGTTaGCTGGATTCATTTGTGATACCAAACACATCAGGAATTAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGCHDKSPPSSICG*LDSFVIPNTSGIRS Trigger: TGATCTAATTCCTGATGTGTTTGGTATCACAAATGAATCCAGCCAACCGCAGATACTGCTAGGAGGAGATTTATCATGGCATCCTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | TCGAGGGACATTGTGAGGATATGGAATGACAATCAGCTGGGAATTTaGAATGATTGCTGTCCACTCTTGTTTTCTTATAGACTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRDIVRIWNDNQLGI*NDCCPLLFSYRLLS Trigger: GGAGAGAAGTCTATAAGAAAACAAGAGTGGACAGCAATCATTCCAAATTCCCAGCTGATTGTCATTCCATATCCTCACAATGTCCCTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | CTATGGATAGAGAAGTTTCCACCCAAATTTTCCCATATCTCAAACTaGAAGGCATTAGAGGCAGTCAATGTCGTGAGGAATAAATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWIEKFPPKFSHISN*KALEAVNVVRNKSA Trigger: AGCAGATTTATTCCTCACGACATTGACTGCCTCTAATGCCTTCCAGTTTGAGATATGGGAAAATTTGGGTGGAAACTTCTCTATCCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACACTGTTGGTATGATTTaGGGGAAAGTATGTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MSSLICSEECYLNNFIWHTVGMI*GKVCEQ Trigger: CTGCTCACATACTTTCCCCAAAATCATACCAACAGT...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | ACGTCCTTTCACCATCCTCAGTCTAACAACATTGTAAACACAGATACACCAAGTGCCTCAAAGTTATTTTaGAGTGTATGGATGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TSFHHPQSNNIVNTDTPSASKLF*SVWMAT Trigger: TGTTGCCATCCATACACTCAAAAATAACTTTGAGGC...ACTTGGTGTATCTGTGTTTACAATGTTGTTAGACTGAGGATGGTGAAAGGACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 90 bp | AGGAATAAATCTGCTGTAAAATCTTCAGTCAGATCAATAAATGCATaGGAATGTGGATCTCGCATTTTACTCTTAGTGGTCAAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNKSAVKSSVRSINA*ECGSRILLLVVKAG Trigger: TCCTGCCTTGACCACTAAGAGTAAAATGCGAGATCCACATTCCCATGCATTTATTGATCTGACTGAAGATTTTACAGCAGATTTATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACGTCCATAATCAGTGGTaGGTCATGAAAAGTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: MSSLICSEECYLNNFIWHVHNQW*VMKSPI Trigger: AATAGGACTTTTCATGACCAACCACTGATTATGGAC...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTCTGATCTGCAGTGAAGAATGTTACTTGAATAACTTTATCTGGCACGATTGCTGTCCACTCTaGTTTTCTTATAGACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSLICSEECYLNNFIWHDCCPL*FSYRLL Trigger: GAGAAGTCTATAAGAAAACAAGAGTGGACAGCAATC...GTGCCAGATAAAGTTATTCAAGTAACATTCTTCACTGCAGATCAGACTGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 90 bp | TCAGGAATTAGATCACCATTGAAGTCCATAATCAGTGGTTGGTCATaGAAAGTCCTATTGAGTATGGTCATGTTTTTAGGATCTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGIRSPLKSIISGWS*KVLLSMVMFLGSNV Trigger: AACATTAGATCCTAAAAACATGACCATACTCAATAGGACTTTTCATGACCAACCACTGATTATGGACTTCAATGGTGATCTAATTCCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS GCA 72 bp | CAGGCCTCAGCCCCAAAGAGCTCGGCCGTGACGTTGTaGAGAGCCCGCGCCGGGGCAGGCCCAACGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QASAPKSSAVTL*RARAGAGPTLS Trigger: GCTGAGCGTTGGGCCTGCCCCGGCGCGGGCTCTGCACAACGTCACGGCCGAGCTCTTTGGGGCTGAGGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 90 bp | TCATTTCTTTCCCGCAGCACGAAGAGGTCCGTCTGTTTGTCGGAGTaGAGGTCACCGAAGGCCGCCAGGGTGCCCCAGGCCTCAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFLSRSTKRSVCLSE*RSPKAARVPQASAP Trigger: TGGGGCTGAGGCCTGGGGCACCCTGGCGGCCTTCGGTGACCTCAACTCCGACAAACAGACGGACCTCTTCGTGCTGCGGGAAAGAAATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 90 bp | ACAATTAAGTCATTTCTTTCCCGCAGCACGAAGAGGTCCGTCTGTTaGTCGGAGTTGAGGTCACCGAAGGCCGCCAGGGTGCCCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TIKSFLSRSTKRSVC*SELRSPKAARVPQA Trigger: GGCCTGGGGCACCCTGGCGGCCTTCGGTGACCTCAACTCCGACAAACAGACGGACCTCTTCGTGCTGCGGGAAAGAAATGACTTAATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 72 bp | TCATTTCTTTCCCGCAGCACGAAGAGGTCCGTCTGTTaGTCGGAGTTGAGGTCACCGAAGGCCGCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFLSRSTKRSVC*SELRSPKAARV Trigger: CACCCTGGCGGCCTTCGGTGACCTCAACTCCGACAAACAGACGGACCTCTTCGTGCTGCGGGAAAGAAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | TGTAAGGTAGCTGAAGAGCTAAGTGTGCTGACTGGCTaGGCTGTCCAGCTGAGCCGTTTTTCAGATATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CKVAEELSVLTG*AVQLSRFSDIH Trigger: ATGGATATCTGAAAAACGGCTCAGCTGGACAGCTCAGCCAGTCAGCACACTTAGCTCTTCAGCTACCTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 90 bp | GGACATCCATTTGTGAATCCCCATCATAATCACCAGGGACCACACTaGTTACCAACGCACTCAAAGTCTTCAGGGATACCTTTACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHPFVNPHHNHQGPH*LPTHSKSSGIPLPW Trigger: CCAAGGTAAAGGTATCCCTGAAGACTTTGAGTGCGTTGGTAACAAGTGTGGTCCCTGGTGATTATGATGGGGATTCACAAATGGATGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 90 bp | GTAGTCTCCAATGTGAAGTGTGAGTGGGATTGGTATTGTGGTTGGTaGTTCTTCATGCACAAATGGCACAAAGCCCCAGAGTGTACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VVSNVKCEWDWYCGW*FFMHKWHKAPECTL Trigger: AAGGGTACACTCTGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | TTCTCTCCAGATGGACGGGGAATACCAACAAAAAGATaGTCCAGGAAATTGGCACTTCGGCCTAAGCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSPDGRGIPTKR*SRKLALRPKPS Trigger: ACTTGGCTTAGGCCGAAGTGCCAATTTCCTGGATCATCTTTTTGTTGGTATTCCCCGTCCATCTGGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | GCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTGAGTaGGATTGGTATTGTGGTTGGTTGTTCTTCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AVHVVVSNVKCE*DWYCGWLFFMH Trigger: GTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATGGACGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | TCAGCAGGACAATGTTACTTGGTGTCAGGTACAATTTaGCACTCCAGCTTCGAGGGACATTGTGAGGATATG | + |
|
Preference number: 6 (lower is better) Translates to: SAGQCYLVSGTI*HSSFEGHCEDM Trigger: CATATCCTCACAATGTCCCTCGAAGCTGGAGTGCCAAATTGTACCTGACACCAAGTAACATTGTCCTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | GGTAGCCGTCCATGTTGTAGTCTCCAATGTGAAGTGTaGGTGGGATTGGTATTGTGGTTGGTTGTTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSRPCCSLQCEV*VGLVLWLVVLH Trigger: ATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATGGACGGCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | AGGTACAATTTGGCACTCCAGCTTCGAGGGACATTGTaGGGATATGGAATGACAATCAGCTGGGAATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RYNLALQLRGTL*GYGMTISWEFG Trigger: TCCAAATTCCCAGCTGATTGTCATTCCATATCCTCACAATGTCCCTCGAAGCTGGAGTGCCAAATTGTACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS GCA 72 bp | GCAGGATGCCATGATAAATCTCCTCCTAGCAGTATCTaGGGTTGGCTGGATTCATTTGTGATACCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: AGCHDKSPPSSI*GWLDSFVIPNT Trigger: TGTGTTTGGTATCACAAATGAATCCAGCCAACCGCAGATACTGCTAGGAGGAGATTTATCATGGCATCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | TCCAATGTGAAGTGTGAGTGGGATTGGTATTGTGGTTaGTTGTTCTTCATGCACAAATGGCACAAAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SNVKCEWDWYCG*LFFMHKWHKAP Trigger: TGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | GCTTCCAGATGTATTCTTCAATATAGCCAGAGCATCTaGGTAGCCGTCCATGTTGTAGTCTCCAATGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRCILQYSQSI*VAVHVVVSNVK Trigger: CTTCACATTGGAGACTACAACATGGACGGCTACCCAGATGCTCTGGCTATATTGAAGAATACATCTGGAAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 72 bp | TTTGTGAATCCCCATCATAATCACCAGGGACCACACTaGTTACCAACGCACTCAAAGTCTTCAGGGATACCT | + |
|
Preference number: 6 (lower is better) Translates to: FVNPHHNHQGPH*LPTHSKSSGIP Trigger: AGGTATCCCTGAAGACTTTGAGTGCGTTGGTAACAAGTGTGGTCCCTGGTGATTATGATGGGGATTCACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 72 bp | AATGTGAAGTGTGAGTGGGATTGGTATTGTGGTTGGTaGTTCTTCATGCACAAATGGCACAAAGCCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NVKCEWDWYCGW*FFMHKWHKAPE Trigger: CTCTGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | TGCCATGATAAATCTCCTCCTAGCAGTATCTGCGGTTaGCTGGATTCATTTGTGATACCAAACACATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CHDKSPPSSICG*LDSFVIPNTSG Trigger: TCCTGATGTGTTTGGTATCACAAATGAATCCAGCCAACCGCAGATACTGCTAGGAGGAGATTTATCATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | GACGGGGAATACCAACAAAAAGATGATCCAGGAAATTaGCACTTCGGCCTAAGCCAAGTACATTGTAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DGEYQQKDDPGN*HFGLSQVHCKV Trigger: TACCTTACAATGTACTTGGCTTAGGCCGAAGTGCCAATTTCCTGGATCATCTTTTTGTTGGTATTCCCCGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 72 bp | AATCAGCTGGGAATTTGGAATGATTGCTGTCCACTCTaGTTTTCTTATAGACTTCTCTCCAGATGGACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NQLGIWNDCCPL*FSYRLLSRWTG Trigger: CCCCGTCCATCTGGAGAGAAGTCTATAAGAAAACAAGAGTGGACAGCAATCATTCCAAATTCCCAGCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | GAGAAGTTTCCACCCAAATTTTCCCATATCTCAAACTaGAAGGCATTAGAGGCAGTCAATGTCGTGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: EKFPPKFSHISN*KALEAVNVVRN Trigger: ATTCCTCACGACATTGACTGCCTCTAATGCCTTCCAGTTTGAGATATGGGAAAATTTGGGTGGAAACTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | GATTGGTATTGTGGTTGGTTGTTCTTCATGCACAAATaGCACAAAGCCCCAGAGTGTACCCTTATTGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DWYCGWLFFMHK*HKAPECTLIAK Trigger: TTTAGCAATAAGGGTACACTCTGGGGCTTTGTGCCATTTGTGCATGAAGAACAACCAACCACAATACCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | CATGTTGTAGTCTCCAATGTGAAGTGTGAGTGGGATTaGTATTGTGGTTGGTTGTTCTTCATGCACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HVVVSNVKCEWD*YCGWLFFMHKW Trigger: CCATTTGTGCATGAAGAACAACCAACCACAATACCAATCCCACTCACACTTCACATTGGAGACTACAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | TTATTGCATGGGACGTTCTCCAGTAAAAAGGCTTGCTaGTTGCTTCCAGATGTATTCTTCAATATAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLHGTFSSKKAC*LLPDVFFNIAR Trigger: TCTGGCTATATTGAAGAATACATCTGGAAGCAATCAGCAAGCCTTTTTACTGGAGAACGTCCCATGCAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | AAAATCTTCAGTCAGATCAATAAATGCATGGGAATGTaGATCTCGCATTTTACTCTTAGTGGTCAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KIFSQINKCMGM*ISHFTLSGQGR Trigger: CCTGCCTTGACCACTAAGAGTAAAATGCGAGATCCACATTCCCATGCATTTATTGATCTGACTGAAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CCA 72 bp | TCTGCTGTAAAATCTTCAGTCAGATCAATAAATGCATaGGAATGTGGATCTCGCATTTTACTCTTAGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAVKSSVRSINA*ECGSRILLLVV Trigger: GACCACTAAGAGTAAAATGCGAGATCCACATTCCCATGCATTTATTGATCTGACTGAAGATTTTACAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 90 bp | TCTGCCTCAAAGTTATTTTTGAGTGTATGGATGGCAACATCATTCTaGGTGTATCCTTTACTGAGGACTATAATGTCCAAGATTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SASKLFLSVWMATSF*VYPLLRTIMSKIPS Trigger: AGATGGAATCTTGGACATTATAGTCCTCAGTAAAGGATACACCAAGAATGATGTTGCCATCCATACACTCAAAAATAACTTTGAGGCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS TCA 72 bp | AGATCACCATTGAAGTCCATAATCAGTGGTTGGTCATaGAAAGTCCTATTGAGTATGGTCATGTTTTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLKSIISGWS*KVLLSMVMFLG Trigger: TCCTAAAAACATGACCATACTCAATAGGACTTTTCATGACCAACCACTGATTATGGACTTCAATGGTGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||
| CDS CAA 72 bp | AAGTTATTTTTGAGTGTATGGATGGCAACATCATTCTaGGTGTATCCTTTACTGAGGACTATAATGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KLFLSVWMATSF*VYPLLRTIMSK Trigger: CTTGGACATTATAGTCCTCAGTAAAGGATACACCAAGAATGATGTTGCCATCCATACACTCAAAAATAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034140.9 |
||