Pregenerated sensors for ITCH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027598

Ensembl transcript IDs: ENSMUST00000029126.15, ENSMUST00000109685.8

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GCTGCTCCTGTGTCAGGAGTGGAGTGTGAAGACAGCGCAGCTGTGTaGCTGCTGGACGCTGTTGTGACTGCAGAGTCTGCACCACTGACC	+
Preference number: 1 (lower is better) Translates to: AAPVSGVECEDSAAV*LLDAVVTAESAPLT Trigger: GGTCAGTGGTGCAGACTCTGCAGTCACAACAGCGTCCAGCAGCCACACAGCTGCGCTGTCTTCACACTCCACTCCTGACACAGGAGCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	GGGCTGGGGAGGAGCCGAGCTCTCCCTTCACTGATCACTTCTTCATaGGGCAACCCGTCTGTCACGTCTCTGCTGAGGATGGCAGTGTTA	+
Preference number: 1 (lower is better) Translates to: GLGRSRALPSLITSS*GNPSVTSLLRMAVL Trigger: TAACACTGCCATCCTCAGCAGAGACGTGACAGACGGGTTGCCTCATGAAGAAGTGATCAGTGAAGGGAGAGCTCGGCTCCTCCCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	GACGAGCGGAGAGCACAAGCAGCAGCTGCTCATGTGCCCAGACACTaGGTTAAGCTTGCACCTCTGAGCGAGGCTTTACAGGAAGACCTT	+
Preference number: 1 (lower is better) Translates to: DERRAQAAAAHVPRH*VKLAPLSEALQEDL Trigger: AAGGTCTTCCTGTAAAGCCTCGCTCAGAGGTGCAAGCTTAACTCAGTGTCTGGGCACATGAGCAGCTGCTGCTTGTGCTCTCCGCTCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	CAGCAGCTGCTCATGTGCCCAGACACTGAGTTAAGCTTGCACCTCTaGGCGAGGCTTTACAGGAAGACCTTGTGTATTGCGTTTCCGAGA	+
Preference number: 1 (lower is better) Translates to: QQLLMCPDTELSLHL*ARLYRKTLCIAFPR Trigger: TCTCGGAAACGCAATACACAAGGTCTTCCTGTAAAGCCTCGCTCAGAGGTGCAAGCTTAACTCAGTGTCTGGGCACATGAGCAGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	GCAGTGTTAAGGAGCACAGCTGCACGAGTTCAAACTGTCCCAGGATaGGAACAGGATGAGCAGCTAGGGACACAGAAACACTTTCTTTCC	+
Preference number: 1 (lower is better) Translates to: AVLRSTAARVQTVPG*EQDEQLGTQKHFLS Trigger: GGAAAGAAAGTGTTTCTGTGTCCCTAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTTGAACTCGTGCAGCTGTGCTCCTTAACACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	ATAAGGCTAATTTTGGGATTTGGCTACAATAGGGACTCACCTGGCTaGGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCC	+
Preference number: 1 (lower is better) Translates to: IRLILGFGYNRDSPG*GFILLPIKSGQQPS Trigger: GGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGTGAGTCCCTATTGTAGCCAAATCCCAAAATTAGCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 90 bp	AAGCTTGCACCTCTGAGCGAGGCTTTACAGGAAGACCTTGTGTATTaGGTTTCCGAGATGTCCCTGCAGAATCCTTTACAATACCCACTA	+
Preference number: 1 (lower is better) Translates to: KLAPLSEALQEDLVY*VSEMSLQNPLQYPL Trigger: TAGTGGGTATTGTAAAGGATTCTGCAGGGACATCTCGGAAACGCAATACACAAGGTCTTCCTGTAAAGCCTCGCTCAGAGGTGCAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 90 bp	ACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTaGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGCTCTCCC	+
Preference number: 1 (lower is better) Translates to: TLERTRASRDDMYFL*YKGKKRAGEEPSSP Trigger: GGGAGAGCTCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 90 bp	GAGATGTCCCTGCAGAATCCTTTACAATACCCACTAAGAGACCTATaGCCAAGTGAGACTTCGGACATACAGCAAACTGTTGTTAAGGGA	+
Preference number: 1 (lower is better) Translates to: EMSLQNPLQYPLRDL*PSETSDIQQTVVKG Trigger: TCCCTTAACAACAGTTTGCTGTATGTCCGAAGTCTCACTTGGGCATAGGTCTCTTAGTGGGTATTGTAAAGGATTCTGCAGGGACATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 90 bp	AAAAATGCAAGTCCTGCATCACTTCCAGGAATAGCATCAGAATGGTaGACTGATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAG	+
Preference number: 1 (lower is better) Translates to: KNASPASLPGIASEW*TDSCSRNEKQQSGQ Trigger: CTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAATCAGTGCACCATTCTGATGCTATTCCTGGAAGTGATGCAGGACTTGCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 90 bp	ATACTCATTTTGGACCAAAATTTGAGAGCATCTGGTCAATGTGCCTaGTGTTTAGGTGCATTGTCTTATATACGCTCTGACTCCTGGGAT	+
Preference number: 1 (lower is better) Translates to: ILILDQNLRASGQCA*CLGALSYIRSDSWD Trigger: ATCCCAGGAGTCAGAGCGTATATAAGACAATGCACCTAAACAGCAGGCACATTGACCAGATGCTCTCAAATTTTGGTCCAAAATGAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 90 bp	AATCTATTCCCAAATACTCATTTTGGACCAAAATTTGAGAGCATCTaGTCAATGTGCCTGCTGTTTAGGTGCATTGTCTTATATACGCTC	+
Preference number: 1 (lower is better) Translates to: NLFPNTHFGPKFESI*SMCLLFRCIVLYTL Trigger: GAGCGTATATAAGACAATGCACCTAAACAGCAGGCACATTGACCAGATGCTCTCAAATTTTGGTCCAAAATGAGTATTTGGGAATAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 90 bp	GTTAAGTTTCTGACTACAGTTTGTAGATCTGCTTTCTGGAAACGTTaGGTAGAAATCCAGAATGACTGGAAGATCTCAACGATAACATTA	+
Preference number: 1 (lower is better) Translates to: VKFLTTVCRSAFWKR*VEIQNDWKISTITL Trigger: TAATGTTATCGTTGAGATCTTCCAGTCATTCTGGATTTCTACTCAACGTTTCCAGAAAGCAGATCTACAAACTGTAGTCAGAAACTTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 90 bp	ATATTTATAGCCATTTATTACCAAAGTTCAGGCCTATGTAGTGAATaGATAGTTGGCAGACATTCGCTCTGTAAGACAAAGCAATTAGCA	+
Preference number: 1 (lower is better) Translates to: IFIAIYYQSSGLCSE*IVGRHSLCKTKQLA Trigger: TGCTAATTGCTTTGTCTTACAGAGCGAATGTCTGCCAACTATCCATTCACTACATAGGCCTGAACTTTGGTAATAAATGGCTATAAATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGAGGGTAGACACGGCTaGTCCTGTGTCAGGAGTGGA	+
Preference number: 2 (lower is better) Translates to: TWLRFHLAAHKVWAATILEGRHG*SCVRSG Trigger: TCCACTCCTGACACAGGAGCAGCCGTGTCTACCCTC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCCTCCTGTGTCAGGAGTaGAGTGTGAAGACAGCGCAG	+
Preference number: 2 (lower is better) Translates to: TWLRFHLAAHKVWAATILLLCQE*SVKTAQ Trigger: CTGCGCTGTCTTCACACTCCACTCCTGACACAGGAG...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCCATGTGCCCAGACACTaGGTTAAGCTTGCACCTCTG	+
Preference number: 2 (lower is better) Translates to: TWLRFHLAAHKVWAATILHVPRH*VKLAPL Trigger: CAGAGGTGCAAGCTTAACTCAGTGTCTGGGCACATG...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACCATGTGCCCAGACACTaGGTTAAGCTTGCACCTCTG	+
Preference number: 2 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHHVPRH*VKLAPL Trigger: CAGAGGTGCAAGCTTAACTCAGTGTCTGGGCACATG...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGTCAGGAGTGGAGTGTaGAGACAGCGCAGCTGTGTG	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVVRSGV*RQRSCV Trigger: CACACAGCTGCGCTGTCTTCACACTCCACTCCTGAC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGTCAGGAGTGGAGTGTaGAGACAGCGCAGCTGTGTG	+
Preference number: 2 (lower is better) Translates to: MTCISCGIRVKRGLGRSRVRSGV*RQRSCV Trigger: CACACAGCTGCGCTGTCTTCACACTCCACTCCTGAC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGAAGGGGACAGACACTaGAGACAAGTCCCTGGCCTC	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVEGDRH*RQVPGL Trigger: GAGGCCAGGGACTTGTCTGCAGTGTCTGTCCCCTTC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGAAGGGGACAGACACTaGAGACAAGTCCCTGGCCTC	+
Preference number: 2 (lower is better) Translates to: MTCISCGIRVKRGLGRSREGDRH*RQVPGL Trigger: GAGGCCAGGGACTTGTCTGCAGTGTCTGTCCCCTTC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACCAGAGTCTGCACCACTaGCCTCCATTTGTGTTAGGA	+
Preference number: 2 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHQSLHH*PPFVLG Trigger: TCCTAACACAAATGGAGGTCAGTGGTGCAGACTCTG...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTAGCACAAGCAGCAGCTaGTCATGTGCCCAGACACTG	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVSTSSS*SCAQTL Trigger: CAGTGTCTGGGCACATGAGCAGCTGCTGCTTGTGCT...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGCTGCCCATAAAGTCTaGGCAGCAACCATCCTCACA	+
Preference number: 2 (lower is better) Translates to: FLWDRGLSHLVFLALCYAAAHKV*AATILT Trigger: TGTGAGGATGGTTGCTGCCCAGACTTTATGGGCAGC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGCTGCCCATAAAGTCTaGGCAGCAACCATCCTCACA	+
Preference number: 2 (lower is better) Translates to: MTCISCGIRVKRGLGRSRAAHKV*AATILT Trigger: TGTGAGGATGGTTGCTGCCCAGACTTTATGGGCAGC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCAGAGTCTGCACCACTaGCCTCCATTTGTGTTAGGA	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVQSLHH*PPFVLG Trigger: TCCTAACACAAATGGAGGTCAGTGGTGCAGACTCTG...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTTTACAATAAGATGTaGAACAGGCAGAGAAGGAAG	+
Preference number: 2 (lower is better) Translates to: TWLRFHLAAHKVWAATILVYNKM*NRQRRK Trigger: CTTCCTTCTCTGCCTGTTGCACATCTTATTGTAAAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCTTCATGCTCCAGGAATaGAAAACAACAGTCAGGCCA	+
Preference number: 2 (lower is better) Translates to: FLWDRGLSHLVFLALCYAFMLQE*KTTVRP Trigger: TGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAA...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACCTAAGCCAAGGTAAATaGCCTACAGAGAAGGTCAAA	+
Preference number: 2 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHLSQGK*PTEKVK Trigger: TTTGACCTTCTCTGTAGGTCATTTACCTTGGCTTAG...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCAAACTGTCCCAGGATaGGAACAGGATGAGCAGCTA	+
Preference number: 2 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEQTVPG*EQDEQL Trigger: TAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTTG...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTGTGACTGCAGAGTCTaGACCACTGACCTCCATTTG	+
Preference number: 2 (lower is better) Translates to: RDDMYFLWYKGKKRAGEECDCRV*TTDLHL Trigger: CAAATGGAGGTCAGTGGTGCAGACTCTGCAGTCACA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGAGGGTAGACACGGCTaGTCCTGTGTCAGGAGTGGA	+
Preference number: 2 (lower is better) Translates to: RFPTLERTRASRDDMYFLEGRHG*SCVRSG Trigger: TCCACTCCTGACACAGGAGCAGCCGTGTCTACCCTC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGACTAAGCCAAGGTAAATaGCCTACAGAGAAGGTCAAA	+
Preference number: 2 (lower is better) Translates to: MTCISCGIRVKRGLGRSRLSQGK*PTEKVK Trigger: TTTGACCTTCTCTGTAGGTCATTTACCTTGGCTTAG...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAGCACAAGCAGCAGCTaGTCATGTGCCCAGACACTG	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKSTSSS*SCAQTL Trigger: CAGTGTCTGGGCACATGAGCAGCTGCTGCTTGTGCT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTCCTGTGTCAGGAGTaGAGTGTGAAGACAGCGCAG	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLLCQE*SVKTAQ Trigger: CTGCGCTGTCTTCACACTCCACTCCTGACACAGGAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGGACCAAGTTTTCCCTaGATTCAAATAGACAAAACT	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVGPSFP*IQIDKT Trigger: AGTTTTGTCTATTTGAATTCAGGGAAAACTTGGTCC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAGAGCTCTCCCTTCACTaGTCACTTCTTCATGAGGCA	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKELSLH*SLLHEA Trigger: TGCCTCATGAAGAAGTGATCAGTGAAGGGAGAGCTC...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGCCACTAAGAGACCTATaGCCAAGTGAGACTTCGGAC	+
Preference number: 2 (lower is better) Translates to: RFPTLERTRASRDDMYFLPLRDL*PSETSD Trigger: GTCCGAAGTCTCACTTGGGCATAGGTCTCTTAGTGG...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGTGTTAGGAAATGGTTaGAACTTGAATAGTTTAGCA	+
Preference number: 2 (lower is better) Translates to: FLWDRGLSHLVFLALCYAVLGNG*NLNSLA Trigger: TGCTAAACTATTCAAGTTGCAACCATTTCCTAACAC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAATGTGACTGCAGAGTCTaGACCACTGACCTCCATTTG	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKCDCRV*TTDLHL Trigger: CAAATGGAGGTCAGTGGTGCAGACTCTGCAGTCACA...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCAGAGAAGGTCAAAGTaGATTCATCAGTTACTAAAG	+
Preference number: 2 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVQRRSK*IHQLLK Trigger: CTTTAGTAACTGATGAATGCACTTTGACCTTCTCTG...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCAAACTGTCCCAGGATaGGAACAGGATGAGCAGCTA	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDQTVPG*EQDEQL Trigger: TAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTTG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATGAGCTCTCCCTTCACTaGTCACTTCTTCATGAGGCA	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDELSLH*SLLHEA Trigger: TGCCTCATGAAGAAGTGATCAGTGAAGGGAGAGCTC...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAGTTTACAATAAGATGTaGAACAGGCAGAGAAGGAAG	+
Preference number: 2 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTVYNKM*NRQRRK Trigger: CTTCCTTCTCTGCCTGTTGCACATCTTATTGTAAAC...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGAAAAATGCAAGTCCTaGATCACTTCCAGGAATAGC	+
Preference number: 2 (lower is better) Translates to: RFPTLERTRASRDDMYFLEKCKS*ITSRNS Trigger: GCTATTCCTGGAAGTGATGCAGGACTTGCATTTTTC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATAGCATCTGGTCAATGTaGCTGCTGTTTAGGTGCATT	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDSIWSM*LLFRCI Trigger: AATGCACCTAAACAGCAGGCACATTGACCAGATGCT...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAGTAGAAATCCAGAATaGCTGGAAGATCTCAACGAT	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKSRNPE*LEDLND Trigger: ATCGTTGAGATCTTCCAGTCATTCTGGATTTCTACT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR TCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGAGTAGAAATCCAGAATaGCTGGAAGATCTCAACGAT	+
Preference number: 2 (lower is better) Translates to: RFPTLERTRASRDDMYFLSRNPE*LEDLND Trigger: ATCGTTGAGATCTTCCAGTCATTCTGGATTTCTACT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATGAAAAATGCAAGTCCTaGATCACTTCCAGGAATAGC	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDEKCKS*ITSRNS Trigger: GCTATTCCTGGAAGTGATGCAGGACTTGCATTTTTC...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGTGTTCTTGGCTTTATaGTATGCCACCAACACATTT	+
Preference number: 2 (lower is better) Translates to: RFPTLERTRASRDDMYFLVFLAL*YATNTF Trigger: AAATGTGTTGGTGGCATAGCATAAAGCCAAGAACAC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATTGCCTGCTGTTTAGGTaGATTGTCTTATATACGCTC	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDCLLFR*IVLYTL Trigger: GAGCGTATATAAGACAATGCACCTAAACAGCAGGCA...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATTGGTGCACTGATTCATaGTCCAGGAATGAAAAACAA	+
Preference number: 2 (lower is better) Translates to: IYDAYREKGLKSNLVHPDWCTDS*SRNEKQ Trigger: TTGTTTTTCATTCCTGGAGCATGAATCAGTGCACCA...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAATACTTTGTAGAAAAATaGAAGTCCTGCATCACTTCC	+
Preference number: 2 (lower is better) Translates to: ERTRASRDDMYFLWYKGKYFVEK*KSCITS Trigger: GGAAGTGATGCAGGACTTGCATTTTTCTACAAAGTA...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	GGTAGACACGGCTGCTCCTGTGTCAGGAGTGGAGTGTaGAGACAGCGCAGCTGTGTGGCTGCTGGACGCTGT	+
Preference number: 3 (lower is better) Translates to: GRHGCSCVRSGV*RQRSCVAAGRC Trigger: ACAGCGTCCAGCAGCCACACAGCTGCGCTGTCTTCACACTCCACTCCTGACACAGGAGCAGCCGTGTCTACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 72 bp	GTGTCAGGAGTGGAGTGTGAAGACAGCGCAGCTGTGTaGCTGCTGGACGCTGTTGTGACTGCAGAGTCTGCA	+
Preference number: 3 (lower is better) Translates to: VSGVECEDSAAV*LLDAVVTAESA Trigger: TGCAGACTCTGCAGTCACAACAGCGTCCAGCAGCCACACAGCTGCGCTGTCTTCACACTCCACTCCTGACAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	AGGAGCACAGCTGCACGAGTTCAAACTGTCCCAGGATaGGAACAGGATGAGCAGCTAGGGACACAGAAACAC	+
Preference number: 3 (lower is better) Translates to: RSTAARVQTVPG*EQDEQLGTQKH Trigger: GTGTTTCTGTGTCCCTAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTTGAACTCGTGCAGCTGTGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	GTCTCTGCTGAGGATGGCAGTGTTAAGGAGCACAGCTaGACGAGTTCAAACTGTCCCAGGATGAGAACAGGA	+
Preference number: 3 (lower is better) Translates to: VSAEDGSVKEHS*TSSNCPRMRTG Trigger: TCCTGTTCTCATCCTGGGACAGTTTGAACTCGTGCAGCTGTGCTCCTTAACACTGCCATCCTCAGCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	ATTTTGGGATTTGGCTACAATAGGGACTCACCTGGCTaGGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAG	+
Preference number: 3 (lower is better) Translates to: ILGFGYNRDSPG*GFILLPIKSGQ Trigger: CTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGTGAGTCCCTATTGTAGCCAAATCCCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	CCTCTGAGCGAGGCTTTACAGGAAGACCTTGTGTATTaGGTTTCCGAGATGTCCCTGCAGAATCCTTTACAA	+
Preference number: 3 (lower is better) Translates to: PLSEALQEDLVY*VSEMSLQNPLQ Trigger: TTGTAAAGGATTCTGCAGGGACATCTCGGAAACGCAATACACAAGGTCTTCCTGTAAAGCCTCGCTCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CAA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGACTATGGGACAGGGGTTaGTCACACTTGGTGTTCTTG	+
Preference number: 3 (lower is better) Translates to: MTCISCGIRVKRGLGRSRLWDRG*SHLVFL Trigger: CAAGAACACCAAGTGTGACAAACCCCTGTCCCATAG...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	CTTCCAGGAATAGCATCAGAATGGTGCACTGATTCATaGTCCAGGAATGAAAAACAACAGTCAGGCCAGGCT	+
Preference number: 3 (lower is better) Translates to: LPGIASEWCTDS*SRNEKQQSGQA Trigger: AGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAATCAGTGCACCATTCTGATGCTATTCCTGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 72 bp	AGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTaGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCG	+
Preference number: 3 (lower is better) Translates to: RTRASRDDMYFL*YKGKKRAGEEP Trigger: CGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	CTGCAGAATCCTTTACAATACCCACTAAGAGACCTATaGCCAAGTGAGACTTCGGACATACAGCAAACTGTT	+
Preference number: 3 (lower is better) Translates to: LQNPLQYPLRDL*PSETSDIQQTV Trigger: AACAGTTTGCTGTATGTCCGAAGTCTCACTTGGGCATAGGTCTCTTAGTGGGTATTGTAAAGGATTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	AGTCCTGCATCACTTCCAGGAATAGCATCAGAATGGTaGACTGATTCATGCTCCAGGAATGAAAAACAACAG	+
Preference number: 3 (lower is better) Translates to: SPASLPGIASEW*TDSCSRNEKQQ Trigger: CTGTTGTTTTTCATTCCTGGAGCATGAATCAGTGCACCATTCTGATGCTATTCCTGGAAGTGATGCAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	GGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATaGCACCAACACATTTCAAGGTCCCCATTAGAGAAA	+
Preference number: 3 (lower is better) Translates to: GFVTLGVLGFML*HQHISRSPLEK Trigger: TTTCTCTAATGGGGACCTTGAAATGTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 72 bp	GCAAGTCCTGCATCACTTCCAGGAATAGCATCAGAATaGTGCACTGATTCATGCTCCAGGAATGAAAAACAA	+
Preference number: 3 (lower is better) Translates to: ASPASLPGIASE*CTDSCSRNEKQ Trigger: TTGTTTTTCATTCCTGGAGCATGAATCAGTGCACCATTCTGATGCTATTCCTGGAAGTGATGCAGGACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CAA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACATACAGCAAACTGTaGTTAAGGGAACAATCTAGT	+
Preference number: 3 (lower is better) Translates to: FLWDRGLSHLVFLALCYATYSKL*LREQSS Trigger: ACTAGATTGTTCCCTTAACAACAGTTTGCTGTATGT...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CAA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTACATACAGCAAACTGTaGTTAAGGGAACAATCTAGT	+
Preference number: 3 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVTYSKL*LREQSS Trigger: ACTAGATTGTTCCCTTAACAACAGTTTGCTGTATGT...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	CTGACTACAGTTTGTAGATCTGCTTTCTGGAAACGTTaGGTAGAAATCCAGAATGACTGGAAGATCTCAACG	+
Preference number: 3 (lower is better) Translates to: LTTVCRSAFWKR*VEIQNDWKIST Trigger: CGTTGAGATCTTCCAGTCATTCTGGATTTCTACTCAACGTTTCCAGAAAGCAGATCTACAAACTGTAGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR GCA 72 bp	CATTTTGGACCAAAATTTGAGAGCATCTGGTCAATGTaGCTGCTGTTTAGGTGCATTGTCTTATATACGCTC	+
Preference number: 3 (lower is better) Translates to: HFGPKFESIWSM*LLFRCIVLYTL Trigger: GAGCGTATATAAGACAATGCACCTAAACAGCAGGCACATTGACCAGATGCTCTCAAATTTTGGTCCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CCA 72 bp	GCCATTTATTACCAAAGTTCAGGCCTATGTAGTGAATaGATAGTTGGCAGACATTCGCTCTGTAAGACAAAG	+
Preference number: 3 (lower is better) Translates to: AIYYQSSGLCSE*IVGRHSLCKTK Trigger: CTTTGTCTTACAGAGCGAATGTCTGCCAACTATCCATTCACTACATAGGCCTGAACTTTGGTAATAAATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR-3UTR CAA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTCACACTTGGTGTTCTaGGCTTTATGCTATGCCACC	+
Preference number: 3 (lower is better) Translates to: RFPTLERTRASRDDMYFLSHLVF*ALCYAT Trigger: GGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGA...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	AATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTaGCTACAGTTTGTAGATCTGCTTTCTGGAAACGTT	+
Preference number: 3 (lower is better) Translates to: NFLAVLNLMLSF*LQFVDLLSGNV Trigger: AACGTTTCCAGAAAGCAGATCTACAAACTGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR TCA 72 bp	ATCTGCTTTCTGGAAACGTTGAGTAGAAATCCAGAATaGCTGGAAGATCTCAACGATAACATTAATTTACTT	+
Preference number: 3 (lower is better) Translates to: ICFLETLSRNPE*LEDLNDNINLL Trigger: AAGTAAATTAATGTTATCGTTGAGATCTTCCAGTCATTCTGGATTTCTACTCAACGTTTCCAGAAAGCAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCCTGGTCTTCGTGGGGTaGGTGGAGGTGGTCTCGAAG	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILLVFVG*VEVVSK Trigger: CTTCGAGACCACCTCCACCCACCCCACGAAGACCAG...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCCCTCTTGTTTTCCCCTaGCGCTGCAACCTCAGGGTC	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILPLVFP*RCNLRV Trigger: GACCCTGAGGTTGCAGCGTCAGGGGAAAACAAGAGG...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCTCTTCGTGGGGTGGGTaGAGGTGGTCTCGAAGGTCT	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYASSWGG*RWSRRS Trigger: AGACCTTCGAGACCACCTCCACCCACCCCACGAAGA...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGACCTCTTGTTTTCCCCTaGCGCTGCAACCTCAGGGTC	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRPLVFP*RCNLRV Trigger: GACCCTGAGGTTGCAGCGTCAGGGGAAAACAAGAGG...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGGGCTTTTCATTTAACTaGCCTTGGCTTCTGGGGTCT	+
Preference number: 4 (lower is better) Translates to: IHAPGMKNNSQARLGRAEGFSFN*PWLLGS Trigger: AGACCCCAGAAGCCAAGGTCAGTTAAATGAAAAGCC...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGACTGAACTTTTGCCTTaGAGTCCCGCACATAGGCTA	+
Preference number: 4 (lower is better) Translates to: IHAPGMKNNSQARLGRAETELLP*SPAHRL Trigger: TAGCCTATGTGCGGGACTTCAAGGCAAAAGTTCAGT...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGTCAGGTGGTCTGGATTaGTGTAAGAAGCGGGGTTTA	+
Preference number: 4 (lower is better) Translates to: IHAPGMKNNSQARLGRAESGGLD*CKKRGL Trigger: TAAACCCCGCTTCTTACATCAATCCAGACCACCTGA...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGACTGCCAAAACCACATaGTCTGCTTGCTTGTTCTGG	+
Preference number: 4 (lower is better) Translates to: IHAPGMKNNSQARLGRAETAKTT*SACLFW Trigger: CCAGAACAAGCAAGCAGATCATGTGGTTTTGGCAGT...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAGMASC*HQNRKY Trigger: GTATTTCCGGTTCTGGTGCCAGCAACTGGCCATGCC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTCTTCGTGGGGTGGGTaGAGGTGGTCTCGAAGGTCT	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEESSWGG*RWSRRS Trigger: AGACCTTCGAGACCACCTCCACCCACCCCACGAAGA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTATTTCAGGTGGTCTaGATTGATGTAAGAAGCGGG	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILVFQVV*IDVRSG Trigger: CCCGCTTCTTACATCAATCCAGACCACCTGAAATAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCGTCTTCTCAGGTCTTaGGGGCTGAAGCTCATGATC	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVRLLRS*GLKLMI Trigger: GATCATGAGCTTCAGCCCGCAAGACCTGAGAAGACG...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGACGTCTTCTCAGGTCTTaGGGGCTGAAGCTCATGATC	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRRLLRS*GLKLMI Trigger: GATCATGAGCTTCAGCCCGCAAGACCTGAGAAGACG...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CAA 72 bp	ACCTCTGAGCGAGGCTTTACAGGAAGACCTTGTGTATaGCGTTTCCGAGATGTCCCTGCAGAATCCTTTACA	+
Preference number: 4 (lower is better) Translates to: TSERGFTGRPCV*RFRDVPAESFT Trigger: TGTAAAGGATTCTGCAGGGACATCTCGGAAACGCAATACACAAGGTCTTCCTGTAAAGCCTCGCTCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTAGAATTCGTGGATGGTaGGCCATTGACAGAAGCTGG	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVRIRGW*AIDRSW Trigger: CCAGCTTCTGTCAATGGCTCACCATCCACGAATTCT...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGTTAAACTGCTGCATTaGTCCCTGAAGCTGACTACG	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAVKLLH*SLKLTT Trigger: CGTAGTCAGCTTCAGGGAGCAATGCAGCAGTTTAAC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACAATACACTCTGCCGTTaGTATCAGTTCTCTTCTCCC	+
Preference number: 4 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHNTLCR*YQFSSP Trigger: GGGAGAAGAGAACTGATAGCAACGGCAGAGTGTATT...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILVVHKI*NSIHCE Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILVQHFM*QKKEPF Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACCCTCTGATCCATTTGTaGTCACTCTTGTATCATCTC	+
Preference number: 4 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHPLIHL*SLLYHL Trigger: GAGATGATACAAGAGTGAGCACAAATGGATCAGAGG...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGGGGCTGCTTCCACTTaGGACTGTTTGTATTATTGC	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRGAAST*DCLYYC Trigger: GCAATAATACAAACAGTCCCAAGTGGAAGCAGCCCC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGAGAATTGTTCCCATTaGCCCTCTTGTTTTCCCCTG	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRENCSH*PSCFPL Trigger: CAGGGGAAAACAAGAGGGCCAATGGGAACAATTCTC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAGCCATTGACAGAAGCTaGTCTTCGTGGGGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTAIDRS*SSWGGW Trigger: CCACCCACCCCACGAAGACCAGCTTCTGTCAATGGC...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGTATTTCAGGTGGTCTaGATTGATGTAAGAAGCGGG	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAVFQVV*IDVRSG Trigger: CCCGCTTCTTACATCAATCCAGACCACCTGAAATAC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC	+
Preference number: 4 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHFFCLL*LSIYCD Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACACTGGGGTCTTCCCACTaGGTAATCCGAGTGTTGTGG	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTLGSSH*VIRVLW Trigger: CCACAACACTCGGATTACTCAGTGGGAAGACCCCAG...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAAATACACTCTGCCGTTaGTATCAGTTCTCTTCTCCC	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRNTLCR*YQFSSP Trigger: GGGAGAAGAGAACTGATAGCAACGGCAGAGTGTATT...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTAACCAATTTTCTTTaGCAACTTTTTCGATGCAGA	+
Preference number: 4 (lower is better) Translates to: TWLRFHLAAHKVWAATILVTNFL*QLFRCR Trigger: TCTGCATCGAAAAAGTTGGCAAAGAAAATTGGTTAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGGTAACCAATTTTCTTTaGCAACTTTTTCGATGCAGA	+
Preference number: 4 (lower is better) Translates to: IHAPGMKNNSQARLGRAEVTNFL*QLFRCR Trigger: TCTGCATCGAAAAAGTTGGCAAAGAAAATTGGTTAC...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGGGGGCTGCTTCCACTTaGGACTGTTTGTATTATTGC	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEGAAST*DCLYYC Trigger: GCAATAATACAAACAGTCCCAAGTGGAAGCAGCCCC...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTCCCATCGTCTCTGTTaGCTCTTTGTCACCTACAAG	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEESHRLC*LFVTYK Trigger: CTTGTAGGTGACAAAGAGCCAACAGAGACGATGGGA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGGAGAATTGTTCCCATTaGCCCTCTTGTTTTCCCCTG	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEENCSH*PSCFPL Trigger: CAGGGGAAAACAAGAGGGCCAATGGGAACAATTCTC...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGCCATTGACAGAAGCTaGTCTTCGTGGGGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLAIDRS*SSWGGW Trigger: CCACCCACCCCACGAAGACCAGCTTCTGTCAATGGC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACGTTCAACACTTCATGTaGCAAAAGAAAGAACCATTC	+
Preference number: 4 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHVQHFM*QKKEPF Trigger: GAATGGTTCTTTCTTTTGTCACATGAAGTGTTGAAC...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACAAAATCCGGTATCTATaGATTTCCCATGAAACAGAG	+
Preference number: 4 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHKIRYL*ISHETE Trigger: CTCTGTTTCATGGGAAATTCATAGATACCGGATTTT...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTACTCAGCTACCATCCTaGTGTATTCCTCCTTGTTTT	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVTQLPS*CIPPCF Trigger: AAAACAAGGAGGAATACATCAGGATGGTAGCTGAGT...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAACTCAGCTACCATCCTaGTGTATTCCTCCTTGTTTT	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRTQLPS*CIPPCF Trigger: AAAACAAGGAGGAATACATCAGGATGGTAGCTGAGT...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGGCATGGCCAGTTGCTaGCACCAGAACCGGAAATAC	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLGMASC*HQNRKY Trigger: GTATTTCCGGTTCTGGTGCCAGCAACTGGCCATGCC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CAA 72 bp	TATGCCCAAGTGAGACTTCGGACATACAGCAAACTGTaGTTAAGGGAACAATCTAGTGGAATAAGACGAGGG	+
Preference number: 4 (lower is better) Translates to: YAQVRLRTYSKL*LREQSSGIRRG Trigger: CCCTCGTCTTATTCCACTAGATTGTTCCCTTAACAACAGTTTGCTGTATGTCCGAAGTCTCACTTGGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CAA 72 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTaGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAG	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYF*WYKGKKRAGEE Trigger: CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGATTCTTTAAGTTTGGCTaGGATGACAGTGATCTGAAG	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRFFKFG*DDSDLK Trigger: CTTCAGATCACTGTCATCTCAGCCAAACTTAAAGAA...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCTGGGGTCTTCCCACTaGGTAATCCGAGTGTTGTGG	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDLGSSH*VIRVLW Trigger: CCACAACACTCGGATTACTCAGTGGGAAGACCCCAG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCAAAATCCGGTATCTATaGATTTCCCATGAAACAGAG	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAKIRYL*ISHETE Trigger: CTCTGTTTCATGGGAAATTCATAGATACCGGATTTT...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCTTGTCACCTACAAGCTaGAAAGTCATAACTACTTCT	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYALSPTS*KVITTS Trigger: AGAAGTAGTTATGACTTTGCAGCTTGTAGGTGACAA...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACATCCAAGGTTGGCCTCTaGCATGTTGTGGTTCTTGTG	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTSKVGL*HVVVLV Trigger: CACAAGAACCACAACATGGCAGAGGCCAACCTTGGA...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGAAATACTGAACTTTTaGCTTGAAGTCCCGCACATA	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVEILNF*LEVPHI Trigger: TATGTGCGGGACTTCAAGGCAAAAGTTCAGTATTTC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGTAGTTATCCTTCCCTaGATATTCAAACAGGCAATA	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAVVILP*IFKQAI Trigger: TATTGCCTGTTTGAATATGCAGGGAAGGATAACTAC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCTCTTGTATCATCTCTaGTTCTGCAGCCATCATCAT	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEELLYHL*FCSHHH Trigger: ATGATGATGGCTGCAGAACCAGAGATGATACAAGAG...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGATACATTTGTATTTGTTaGTGGCAAGGAGCCTGTACT	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSRYICIC*WQGACT Trigger: AGTACAGGCTCCTTGCCACCAACAAATACAAATGTA...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGTGGTCCACAAAATATaGAATTCCATCCACTGTGAA	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVVVHKI*NSIHCE Trigger: TTCACAGTGGATGGAATTCCATATTTTGTGGACCAC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCATCCTTCAGTCCAACTaGTTTATTCAGGATACGTTT	+
Preference number: 4 (lower is better) Translates to: FLWDRGLSHLVFLALCYAILQSN*FIQDTF Trigger: AAACGTATCCTGAATAAACCAGTTGGACTGAAGGAT...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTTCTTTAAGTTTGGCTaGGATGACAGTGATCTGAAG	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEFFKFG*DDSDLK Trigger: CTTCAGATCACTGTCATCTCAGCCAAACTTAAAGAA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAGACTTCAGGGTCTGGTaGCTCCACACACGAAAACAT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKDFRVW*LHTRKH Trigger: ATGTTTTCGTGTGTGGAGTCACCAGACCCTGAAGTC...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGAGAATTCGTGGATGGTaGGCCATTGACAGAAGCTGG	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLRIRGW*AIDRSW Trigger: CCAGCTTCTGTCAATGGCTCACCATCCACGAATTCT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAATCCAAGGTTGGCCTCTaGCATGTTGTGGTTCTTGTG	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKSKVGL*HVVVLV Trigger: CACAAGAACCACAACATGGCAGAGGCCAACCTTGGA...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGAATATTGCCACCATTaGGTTTCAAATCATGACTCT	+
Preference number: 4 (lower is better) Translates to: MTCISCGIRVKRGLGRSREYCHH*VSNHDS Trigger: AGAGTCATGATTTGAAACCCAATGGTGGCAATATTC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCGGTTAAAACAAGTATaGCTTCTGGGTAACCAATTT	+
Preference number: 4 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVRLKQV*LLGNQF Trigger: AAATTGGTTACCCAGAAGCCATACTTGTTTTAACCG...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAATCCGAGTGTTGTGGTTaGCAAAATACACTCTGCCGT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKSECCG*QNTLCR Trigger: ACGGCAGAGTGTATTTTGTCAACCACAACACTCGGA...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAGGCTTTTCATTTAACTaGCCTTGGCTTCTGGGGTCT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKGFSFN*PWLLGS Trigger: AGACCCCAGAAGCCAAGGTCAGTTAAATGAAAAGCC...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTTTTTCTTGTCACTGTaGTCTTTATATGCTGTGGCA	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEFFLSL*SLYAVA Trigger: TGCCACAGCATATAAAGATCACAGTGACAAGAAAAA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAACTGCCAAAACCACATaGTCTGCTTGCTTGTTCTGG	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKTAKTT*SACLFW Trigger: CCAGAACAAGCAAGCAGATCATGTGGTTTTGGCAGT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGGAATATTGCCACCATTaGGTTTCAAATCATGACTCT	+
Preference number: 4 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEEYCHH*VSNHDS Trigger: AGAGTCATGATTTGAAACCCAATGGTGGCAATATTC...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATTCAGGTGGTCTGGATTaGTGTAAGAAGCGGGGTTTA	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDSGGLD*CKKRGL Trigger: TAAACCCCGCTTCTTACATCAATCCAGACCACCTGA...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGACCTCAGCTTCTACTTaGAGCCCATCAAGACAAACT	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLTSAST*SPSRQT Trigger: AGTTTGTCTTGATGGGCTGCAAGTAGAAGCTGAGGT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACATATCATCTCTGGTTCTaGAGCCATCATCATTCTGTG	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTYHLWF*SHHHSV Trigger: CACAGAATGATGATGGCTGCAGAACCAGAGATGATA...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAACTGTGATCTTTATATaGTGTGGCATGGCCAGTTGC	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKTVIFI*CGMASC Trigger: GCAACTGGCCATGCCACAGCATATAAAGATCACAGT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGACTGTGATCTTTATATaGTGTGGCATGGCCAGTTGC	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLTVIFI*CGMASC Trigger: GCAACTGGCCATGCCACAGCATATAAAGATCACAGT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGACTGTCCATCTACTGTaGCTTCTACATAAGGACTTG	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLTVHLL*LLHKDL Trigger: CAAGTCCTTATGTAGAAGTCACAGTAGATGGACAGT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCAGAACCGGAAATACTaGACTTTTGCCTTGAAGTCC	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDQNRKY*TFALKS Trigger: GGACTTCAAGGCAAAAGTTCAGTATTTCCGGTTCTG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTATCATCTCTGGTTCTaGAGCCATCATCATTCTGTG	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLYHLWF*SHHHSV Trigger: CACAGAATGATGATGGCTGCAGAACCAGAGATGATA...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAGAAATACTGAACTTTTaGCTTGAAGTCCCGCACATA	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTEILNF*LEVPHI Trigger: TATGTGCGGGACTTCAAGGCAAAAGTTCAGTATTTC...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAGAAGTTGAGATTTCATaGTCAGACTACCCATGGAAT	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTEVEIS*SDYPWN Trigger: ATTCCATGGGTAGTCTGACCATGAAATCTCAACTTC...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACATACATTTGTATTTGTTaGTGGCAAGGAGCCTGTACT	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTYICIC*WQGACT Trigger: AGTACAGGCTCCTTGCCACCAACAAATACAAATGTA...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
3UTR CAA 72 bp	AATTACAAACTGAATGAAGAGAGGTATGGTCATATGTaGGCGGGGACCAAGTTTTCCCTGAATTCAAATAGA	+
Preference number: 4 (lower is better) Translates to: NYKLNEERYGHM*AGTKFSLNSNR Trigger: TCTATTTGAATTCAGGGAAAACTTGGTCCCCGCCAACATATGACCATACCTCTCTTCATTCAGTTTGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTTAAAACCACCATTTaGAAGGGACGGAGAATTGTT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLKTTI*KGRRIV Trigger: AACAATTCTCCGTCCCTTTCAAATGGTGGTTTTAAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCCTCTGATCCATTTGTaGTCACTCTTGTATCATCTC	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDPLIHL*SLLYHL Trigger: GAGATGATACAAGAGTGAGCACAAATGGATCAGAGG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCTCTTGTATCATCTCTaGTTCTGCAGCCATCATCAT	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDLLYHL*FCSHHH Trigger: ATGATGATGGCTGCAGAACCAGAGATGATACAAGAG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAATCCTTCAGTCCAACTaGTTTATTCAGGATACGTTT	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTILQSN*FIQDTF Trigger: AAACGTATCCTGAATAAACCAGTTGGACTGAAGGAT...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATTTTTTCTGTCTTCTTTaGCTGTCCATCTACTGTGAC	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDFFCLL*LSIYCD Trigger: GTCACAGTAGATGGACAGTCAAAGAAGACAGAAAAA...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR TCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATCTTAAAACCACCATTTaGAAGGGACGGAGAATTGTT	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDLKTTI*KGRRIV Trigger: AACAATTCTCCGTCCCTTTCAAATGGTGGTTTTAAG...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTTGTCACCTACAAGCTaGAAAGTCATAACTACTTCT	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLLSPTS*KVITTS Trigger: AGAAGTAGTTATGACTTTGCAGCTTGTAGGTGACAA...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGCTGTCACAAGAATATTaGCACCATTGGGTTTCAAAT	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLLSQEY*HHWVSN Trigger: ATTTGAAACCCAATGGTGGCAATATTCTTGTGACAG...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTGTCACAAGAATATTaGCACCATTGGGTTTCAAAT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLSQEY*HHWVSN Trigger: ATTTGAAACCCAATGGTGGCAATATTCTTGTGACAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAATTTCTTTAACAAACTaGCAAAACCACATGATCTGC	+
Preference number: 4 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTISLTN*QNHMIC Trigger: GCAGATCATGTGGTTTTGGCAGTTTGTTAAAGAAAT...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATGAAGTTGAGATTTCATaGTCAGACTACCCATGGAAT	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDEVEIS*SDYPWN Trigger: ATTCCATGGGTAGTCTGACCATGAAATCTCAACTTC...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CCA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACGGTTAAAACAAGTATaGCTTCTGGGTAACCAATTT	+
Preference number: 4 (lower is better) Translates to: ERTRASRDDMYFLWYKGKRLKQV*LLGNQF Trigger: AAATTGGTTACCCAGAAGCCATACTTGTTTTAACCG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGATTTCTTTAACAAACTaGCAAAACCACATGATCTGC	+
Preference number: 4 (lower is better) Translates to: RFPTLERTRASRDDMYFLISLTN*QNHMIC Trigger: GCAGATCATGTGGTTTTGGCAGTTTGTTAAAGAAAT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR GCA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATATCTATATAAGTAGTTaGTCTTCTATTGTGGTCCAC	+
Preference number: 4 (lower is better) Translates to: IYDAYREKGLKSNLVHPDIYISS*SSIVVH Trigger: GTGGACCACAATAGAAGAGCAACTACTTATATAGAT...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CCA 90 bp	CCATGCTGGTCTACTCTCTGCTCCCACCCAGGTGGTAGGGGAGCTTaGCTTACAGTATTCAGAGGCCTAGGGCCCGAGCCTCCAGATATA	+
Preference number: 5 (lower is better) Translates to: PCWSTLCSHPGGRGA*LTVFRGLGPEPPDI Trigger: TATATCTGGAGGCTCGGGCCCTAGGCCTCTGAATACTGTAAGCCAAGCTCCCCTACCACCTGGGTGGGAGCAGAGAGTAGACCAGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 90 bp	CAAGGAGCCTGTACTAGATCCATCACTGTCAGAATTCGTGGATGGTaGGCCATTGACAGAAGCTGGTCTTCGTGGGGTGGGTGGAGGTGG	+
Preference number: 5 (lower is better) Translates to: QGACTRSITVRIRGW*AIDRSWSSWGGWRW Trigger: CCACCTCCACCCACCCCACGAAGACCAGCTTCTGTCAATGGCTCACCATCCACGAATTCTGACAGTGATGGATCTAGTACAGGCTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 90 bp	TGGCCAGTTGCTGGCACCAGAACCGGAAATACTGAACTTTTGCCTTaGAGTCCCGCACATAGGCTATCTGGGGCCCATTGTCTAAGGCTG	+
Preference number: 5 (lower is better) Translates to: WPVAGTRTGNTELLP*SPAHRLSGAHCLRL Trigger: CAGCCTTAGACAATGGGCCCCAGATAGCCTATGTGCGGGACTTCAAGGCAAAAGTTCAGTATTTCCGGTTCTGGTGCCAGCAACTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCCTGTGGCATGGCCAGTaGCTGGCACCAGAACCGGAA	+
Preference number: 5 (lower is better) Translates to: FLWDRGLSHLVFLALCYALWHGQ*LAPEPE Trigger: TTCCGGTTCTGGTGCCAGCAACTGGCCATGCCACAG...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCCTCCCATCGTCTCTGTaGGCTCTTTGTCACCTACAA	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILLPSSL*ALCHLQ Trigger: TTGTAGGTGACAAAGAGCCAACAGAGACGATGGGAG...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCAGGGGCTGCTTCCACTaGGGACTGTTTGTATTATTG	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILRGCFH*GLFVLL Trigger: CAATAATACAAACAGTCCCAAGTGGAAGCAGCCCCT...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACACGTCTTCTCAGGTCTaGCGGGCTGAAGCTCATGAT	+
Preference number: 5 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHTSSQV*RAEAHD Trigger: ATCATGAGCTTCAGCCCGCAAGACCTGAGAAGACGT...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGCCCTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILALKES*CLFFNT Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAGGGC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCGTGGATGGTGAGCCATaGACAGAAGCTGGTCTTCGT	+
Preference number: 5 (lower is better) Translates to: FLWDRGLSHLVFLALCYAVDGEP*TEAGLR Trigger: ACGAAGACCAGCTTCTGTCAATGGCTCACCATCCAC...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGCTGGTCTATCCCATGTaGTTCGCTTTTCAACATGGT	+
Preference number: 5 (lower is better) Translates to: IHAPGMKNNSQARLGRAELVYPM*FAFQHG Trigger: ACCATGTTGAAAAGCGAACAACATGGGATAGACCAG...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCAAATACACTCTGCCGTaGCTATCAGTTCTCTTCTCC	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILKYTLP*LSVLFS Trigger: GGAGAAGAGAACTGATAGCAACGGCAGAGTGTATTT...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTAAGG	+
Preference number: 5 (lower is better) Translates to: IHAPGMKNNSQARLGRAEQLFLQ*LIALVR Trigger: CCTTACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 90 bp	TGGTCTCGAAGGTCTAGGAGGTCTAGAAGGCTTAAAACCACCATTTaGAAGGGACGGAGAATTGTTCCCATTGGCCCTCTTGTTTTCCCC	+
Preference number: 5 (lower is better) Translates to: WSRRSRRSRRLKTTI*KGRRIVPIGPLVFP Trigger: GGGGAAAACAAGAGGGCCAATGGGAACAATTCTCCGTCCCTTTCAAATGGTGGTTTTAAGCCTTCTAGACCTCCTAGACCTTCGAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACGTCTCTGTTGGCTCTTaGTCACCTACAAGCTGCAAA	+
Preference number: 5 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHVSVGS*SPTSCK Trigger: TTTGCAGCTTGTAGGTGACAAAGAGCCAACAGAGAC...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTGTGGATGGTGAGCCATaGACAGAAGCTGGTCTTCGT	+
Preference number: 5 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVVDGEP*TEAGLR Trigger: ACGAAGACCAGCTTCTGTCAATGGCTCACCATCCAC...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCTATTTACATTTGTATTaGTTGGTGGCAAGGAGCCTG	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILYLHLY*LVARSL Trigger: CAGGCTCCTTGCCACCAACAAATACAAATGTAAATA...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ACCTGGCTGAGGTTTCATCTTGCTGCCCATAAAGTCTGGGCAGCAACCATCCTCGTAGTTGCTCTTCTATaGTGGTCCACAAAATATGGA	+
Preference number: 5 (lower is better) Translates to: TWLRFHLAAHKVWAATILVVALL*WSTKYG Trigger: TCCATATTTTGTGGACCACAATAGAAGAGCAACTAC...GAGGATGGTTGCTGCCCAGACTTTATGGGCAGCAAGATGAAACCTCAGCCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGACGTCTTCTCAGGTCTaGCGGGCTGAAGCTCATGAT	+
Preference number: 5 (lower is better) Translates to: RDDMYFLWYKGKKRAGEETSSQV*RAEAHD Trigger: ATCATGAGCTTCAGCCCGCAAGACCTGAGAAGACGT...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATTCATGCTCCAGGAATGAAAAACAACAGTCAGGCCAGGCTGGGACGAGCGGAGCTTCTACATAAGGACTaGGTCCAAACCAATTCTTTT	+
Preference number: 5 (lower is better) Translates to: IHAPGMKNNSQARLGRAELLHKD*VQTNSF Trigger: AAAAGAATTGGTTTGGACCAAGTCCTTATGTAGAAG...CTCCGCTCGTCCCAGCCTGGCCTGACTGTTGTTTTTCATTCCTGGAGCATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTGTGGCATGGCCAGTaGCTGGCACCAGAACCGGAA	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLWHGQ*LAPEPE Trigger: TTCCGGTTCTGGTGCCAGCAACTGGCCATGCCACAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 90 bp	GTTAGTAACAACCTCAGCTTCTACTTGCAGCCCATCAAGACAAACTaGCAAATCTCCCATCGTCTCTGTTGGCTCTTTGTCACCTACAAG	+
Preference number: 5 (lower is better) Translates to: VSNNLSFYLQPIKTN*QISHRLCWLFVTYK Trigger: CTTGTAGGTGACAAAGAGCCAACAGAGACGATGGGAGATTTGTCAGTTTGTCTTGATGGGCTGCAAGTAGAAGCTGAGGTTGTTACTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACTATTTACATTTGTATTaGTTGGTGGCAAGGAGCCTG	+
Preference number: 5 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHYLHLY*LVARSL Trigger: CAGGCTCCTTGCCACCAACAAATACAAATGTAAATA...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCACCAACACCTGATGTATTCCTCCTaGTTTTCTTCTGTCACAAGA	+
Preference number: 5 (lower is better) Translates to: GQGFVTLGVLGFMLCHQHLMYSS*FSSVTR Trigger: TCTTGTGACAGAAGAAAACAAGGAGGAATACATCAG...GTGTTGGTGGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGATTACATTTGTATTTGTaGGTGGCAAGGAGCCTGTAC	+
Preference number: 5 (lower is better) Translates to: MTCISCGIRVKRGLGRSRLHLYL*VARSLY Trigger: GTACAGGCTCCTTGCCACCAACAAATACAAATGTAA...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 90 bp	CCATCCAGGGGGCAACGGACCAAGCGGATCAAATTCTTTGTTTTGTaGTGTAGCAAACAAATCTTGATTCCCATAGATGAATCTCTGGTT	+
Preference number: 5 (lower is better) Translates to: PSRGQRTKRIKFFVL*CSKQILIPIDESLV Trigger: AACCAGAGATTCATCTATGGGAATCAAGATTTGTTTGCTACATCACAAAACAAAGAATTTGATCCGCTTGGTCCGTTGCCCCCTGGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGGACAGTGATCTGAAGTaGAGATTTCATGGTCAGACT	+
Preference number: 5 (lower is better) Translates to: RDDMYFLWYKGKKRAGEEDSDLK*RFHGQT Trigger: AGTCTGACCATGAAATCTCAACTTCAGATCACTGTC...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	TTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCTTGGCTTTATGCTATGCCTCCACTTGGGACTGTTaGTATTATTGCATTTTTCTG	+
Preference number: 5 (lower is better) Translates to: FLWDRGLSHLVFLALCYASTWDC*YYCIFL Trigger: CAGAAAAATGCAATAATACAAACAGTCCCAAGTGGA...GGCATAGCATAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAGTAGTTGCTCTTCTATaGTGGTCCACAAAATATGGA	+
Preference number: 5 (lower is better) Translates to: MTCISCGIRVKRGLGRSRVVALL*WSTKYG Trigger: TCCATATTTTGTGGACCACAATAGAAGAGCAACTAC...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAGCTATCTGGGGCCCATaGTCTAAGGCTGATTTTCCC	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKAIWGP*SKADFP Trigger: GGGAAAATCAGCCTTAGACAATGGGCCCCAGATAGC...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGGCTATCTGGGGCCCATaGTCTAAGGCTGATTTTCCC	+
Preference number: 5 (lower is better) Translates to: RFPTLERTRASRDDMYFLAIWGP*SKADFP Trigger: GGGAAAATCAGCCTTAGACAATGGGCCCCAGATAGC...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACAGTCTCTGTTGGCTCTTaGTCACCTACAAGCTGCAAA	+
Preference number: 5 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTVSVGS*SPTSCK Trigger: TTTGCAGCTTGTAGGTGACAAAGAGCCAACAGAGAC...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTCCCATCGTCTCTGTaGGCTCTTTGTCACCTACAA	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLPSSL*ALCHLQ Trigger: TTGTAGGTGACAAAGAGCCAACAGAGACGATGGGAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTTTATTAATCCAGATGTaGCTCCTTCAGATGTACTTG	+
Preference number: 5 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVLLIQM*LLQMYL Trigger: CAAGTACATCTGAAGGAGCAACATCTGGATTAATAA...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGCCGAAGCGGATCAAATTCTTaGTTTTGTGATGTAGCAAAC	+
Preference number: 5 (lower is better) Translates to: MTCISCGIRVKRGLGRSRSGSNS*FCDVAN Trigger: GTTTGCTACATCACAAAACAAAGAATTTGATCCGCT...TCGGCTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GGACACAGAAACACTTTCTTTCCTATGGGACAGGGGTTTGTCACACTTGGTGTTCCACATTCTTCAATGTaGTTTTCTTTAACCCAGATG	+
Preference number: 5 (lower is better) Translates to: GHRNTFFPMGQGFVTLGVPHSSM*FSLTQM Trigger: CATCTGGGTTAAAGAAAACAACATTGAAGAATGTGG...AACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAAGTGTTTCTGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGAGGGGCTGCTTCCACTaGGGACTGTTTGTATTATTG	+
Preference number: 5 (lower is better) Translates to: RFPTLERTRASRDDMYFLRGCFH*GLFVLL Trigger: CAATAATACAAACAGTCCCAAGTGGAAGCAGCCCCT...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAGAGGGCTGGGGAGGAGTTATTAATCCAGATGTaGCTCCTTCAGATGTACTTG	+
Preference number: 5 (lower is better) Translates to: RDDMYFLWYKGKKRAGEELLIQM*LLQMYL Trigger: CAAGTACATCTGAAGGAGCAACATCTGGATTAATAA...CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCATCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGACGAGGGAAATTTCCTCGCTGTGTTAAATCTCATGTTAAGTTTCTGACTACACTGGTCTATCCCATGTaGTTCGCTTTTCAACATGGT	+
Preference number: 5 (lower is better) Translates to: RRGKFPRCVKSHVKFLTTLVYPM*FAFQHG Trigger: ACCATGTTGAAAAGCGAACAACATGGGATAGACCAG...TGTAGTCAGAAACTTAACATGAGATTTAACACAGCGAGGAAATTTCCCTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CCA 90 bp	AGATGTTGCTCCTTCAGATGTACTTGTATTTACATTTGTATTTGTTaGTGGCAAGGAGCCTGTACTAGATCCATCACTGTCAGAATTCGT	+
Preference number: 5 (lower is better) Translates to: RCCSFRCTCIYICIC*WQGACTRSITVRIR Trigger: ACGAATTCTGACAGTGATGGATCTAGTACAGGCTCCTTGCCACCAACAAATACAAATGTAAATACAAGTACATCTGAAGGAGCAACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAAATACACTCTGCCGTaGCTATCAGTTCTCTTCTCC	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKKYTLP*LSVLFS Trigger: GGAGAAGAGAACTGATAGCAACGGCAGAGTGTATTT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	ATTTACGATGCTTACAGAGAAAAAGGTCTTAAAAGCAACTTAGTCCATCCAGATGCCCTCAAAGAAAGCTaGTGTCTGTTCTTCAACACC	+
Preference number: 5 (lower is better) Translates to: IYDAYREKGLKSNLVHPDALKES*CLFFNT Trigger: GGTGTTGAAGAACAGACACAAGCTTTCTTTGAGGGC...ATCTGGATGGACTAAGTTGCTTTTAAGACCTTTTTCTCTGTAAGCATCGTAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGCAGCTTTTCCTTCAGTaGCTCATAGCTCTTGTAAGG	+
Preference number: 5 (lower is better) Translates to: RFPTLERTRASRDDMYFLQLFLQ*LIALVR Trigger: CCTTACAAGAGCTATGAGCAACTGAAGGAAAAGCTG...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS GCA 90 bp	GACAAATCTCCCATCGTCTCTGTTGGCTCTTTGTCACCTACAAGCTaGAAAGTCATAACTACTTCTTCAAGTTTCATATTGTTTGACTTT	+
Preference number: 5 (lower is better) Translates to: DKSPIVSVGSLSPTS*KVITTSSSFILFDF Trigger: AAAGTCAAACAATATGAAACTTGAAGAAGTAGTTATGACTTTGCAGCTTGTAGGTGACAAAGAGCCAACAGAGACGATGGGAGATTTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAGACAGTGATCTGAAGTaGAGATTTCATGGTCAGACT	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKDSDLK*RFHGQT Trigger: AGTCTGACCATGAAATCTCAACTTCAGATCACTGTC...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	AGATTTCCTACTTTGGAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGCTGATGTATTCCTCCTaGTTTTCTTCTGTCACAAGA	+
Preference number: 5 (lower is better) Translates to: RFPTLERTRASRDDMYFLLMYSS*FSSVTR Trigger: TCTTGTGACAGAAGAAAACAAGGAGGAATACATCAG...CAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACTTCTACATAAGGACTaGGTCCAAACCAATTCTTTT	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKLLHKD*VQTNSF Trigger: AAAAGAATTGGTTTGGACCAAGTCCTTATGTAGAAG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAAAGCGGATCAAATTCTTaGTTTTGTGATGTAGCAAAC	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKSGSNS*FCDVAN Trigger: GTTTGCTACATCACAAAACAAAGAATTTGATCCGCT...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS-3UTR CAA 90 bp	GAAAGAACTAGGGCTTCTAGAGATGACATGTATTTCTTGTGGTATAAGGGTAAACCACATTCTTCAATGTaGTTTTCTTTAACCCAGATG	+
Preference number: 5 (lower is better) Translates to: ERTRASRDDMYFLWYKGKPHSSM*FSLTQM Trigger: CATCTGGGTTAAAGAAAACAACATTGAAGAATGTGG...TTTACCCTTATACCACAAGAAATACATGTCATCTCTAGAAGCCCTAGTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS GCA 72 bp	CAGTTGCTGGCACCAGAACCGGAAATACTGAACTTTTaGCTTGAAGTCCCGCACATAGGCTATCTGGGGCCC	+
Preference number: 6 (lower is better) Translates to: QLLAPEPEILNF*LEVPHIGYLGP Trigger: GGGCCCCAGATAGCCTATGTGCGGGACTTCAAGGCAAAAGTTCAGTATTTCCGGTTCTGGTGCCAGCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 72 bp	CCCCTGACGCTGCAACCTCAGGGTCCTCTGATCCATTaGTGCTCACTCTTGTATCATCTCTGGTTCTGCAGC	+
Preference number: 6 (lower is better) Translates to: PLTLQPQGPLIH*CSLLYHLWFCS Trigger: GCTGCAGAACCAGAGATGATACAAGAGTGAGCACAAATGGATCAGAGGACCCTGAGGTTGCAGCGTCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 90 bp	CCTGTACTAGATCCATCACTGTCAGAATTCGTGGATGGTGAGCCATaGACAGAAGCTGGTCTTCGTGGGGTGGGTGGAGGTGGTCTCGAA	+
Preference number: 6 (lower is better) Translates to: PVLDPSLSEFVDGEP*TEAGLRGVGGGGLE Trigger: TTCGAGACCACCTCCACCCACCCCACGAAGACCAGCTTCTGTCAATGGCTCACCATCCACGAATTCTGACAGTGATGGATCTAGTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 72 bp	TTTGAAAGGGACGGAGAATTGTTCCCATTGGCCCTCTaGTTTTCCCCTGACGCTGCAACCTCAGGGTCCTCT	+
Preference number: 6 (lower is better) Translates to: FERDGELFPLAL*FSPDAATSGSS Trigger: AGAGGACCCTGAGGTTGCAGCGTCAGGGGAAAACAAGAGGGCCAATGGGAACAATTCTCCGTCCCTTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 90 bp	CACGCCGTTCCCAGCCAGGAGGTAGAGGTTCTGGTCTATCCCATGTaGTTCGCTTTTCAACATGGTCTACATAGTAAACACGCCCATGCT	+
Preference number: 6 (lower is better) Translates to: HAVPSQEVEVLVYPM*FAFQHGLHSKHAHA Trigger: AGCATGGGCGTGTTTACTATGTAGACCATGTTGAAAAGCGAACAACATGGGATAGACCAGAACCTCTACCTCCTGGCTGGGAACGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	TGTACTAGATCCATCACTGTCAGAATTCGTGGATGGTaGGCCATTGACAGAAGCTGGTCTTCGTGGGGTGGG	+
Preference number: 6 (lower is better) Translates to: CTRSITVRIRGW*AIDRSWSSWGG Trigger: CCCACCCCACGAAGACCAGCTTCTGTCAATGGCTCACCATCCACGAATTCTGACAGTGATGGATCTAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS GCA 72 bp	CTGACGCTGCAACCTCAGGGTCCTCTGATCCATTTGTaGTCACTCTTGTATCATCTCTGGTTCTGCAGCCAT	+
Preference number: 6 (lower is better) Translates to: LTLQPQGPLIHL*SLLYHLWFCSH Trigger: ATGGCTGCAGAACCAGAGATGATACAAGAGTGAGCACAAATGGATCAGAGGACCCTGAGGTTGCAGCGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 72 bp	AAACCACCATTTGAAAGGGACGGAGAATTGTTCCCATaGGCCCTCTTGTTTTCCCCTGACGCTGCAACCTCA	+
Preference number: 6 (lower is better) Translates to: KPPFERDGELFP*ALLFSPDAATS Trigger: TGAGGTTGCAGCGTCAGGGGAAAACAAGAGGGCCAATGGGAACAATTCTCCGTCCCTTTCAAATGGTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 72 bp	TCCTGGGAAAATCACCCACAAACGTCTTCTCAGGTCTaGCGGGCTGAAGCTCATGATCTGCTGAAAGGAATC	+
Preference number: 6 (lower is better) Translates to: SWENHPQTSSQV*RAEAHDLLKGI Trigger: GATTCCTTTCAGCAGATCATGAGCTTCAGCCCGCAAGACCTGAGAAGACGTTTGTGGGTGATTTTCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	AACCTCAGCTTCTACTTGCAGCCCATCAAGACAAACTaGCAAATCTCCCATCGTCTCTGTTGGCTCTTTGTC	+
Preference number: 6 (lower is better) Translates to: NLSFYLQPIKTN*QISHRLCWLFV Trigger: GACAAAGAGCCAACAGAGACGATGGGAGATTTGTCAGTTTGTCTTGATGGGCTGCAAGTAGAAGCTGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	GCAGCCATCATCATTCTGTGTAGTACTCTCGGAGCATaGCGTTTCACCGTTAGTAACAACCTCAGCTTCTAC	+
Preference number: 6 (lower is better) Translates to: AAIIILCSTLGA*RFTVSNNLSFY Trigger: GTAGAAGCTGAGGTTGTTACTAACGGTGAAACGTCATGCTCCGAGAGTACTACACAGAATGATGATGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	AGGTCTAGGAGGTCTAGAAGGCTTAAAACCACCATTTaGAAGGGACGGAGAATTGTTCCCATTGGCCCTCTT	+
Preference number: 6 (lower is better) Translates to: RSRRSRRLKTTI*KGRRIVPIGPL Trigger: AAGAGGGCCAATGGGAACAATTCTCCGTCCCTTTCAAATGGTGGTTTTAAGCCTTCTAGACCTCCTAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 72 bp	CCCAGCCAGGAGGTAGAGGTTCTGGTCTATCCCATGTaGTTCGCTTTTCAACATGGTCTACATAGTAAACAC	+
Preference number: 6 (lower is better) Translates to: PSQEVEVLVYPM*FAFQHGLHSKH Trigger: GTGTTTACTATGTAGACCATGTTGAAAAGCGAACAACATGGGATAGACCAGAACCTCTACCTCCTGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	GCAGTTCCCAATAAAACATCAGACTTCAGGGTCTGGTaGCTCCACACACGAAAACATAATTTACTCGTAGGG	+
Preference number: 6 (lower is better) Translates to: AVPNKTSDFRVW*LHTRKHNLLVG Trigger: CCCTACGAGTAAATTATGTTTTCGTGTGTGGAGTCACCAGACCCTGAAGTCTGATGTTTTATTGGGAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS CAA 90 bp	CAAATATTGCTGAGGAAGAATTTCATTAAAGCCCTCAAAGAAAGCTaGTGTCTGTTCTTCAACACCTCGAGACAACCTCCACTCAGCTAC	+
Preference number: 6 (lower is better) Translates to: QILLRKNFIKALKES*CLFFNTSRQPPLSY Trigger: GTAGCTGAGTGGAGGTTGTCTCGAGGTGTTGAAGAACAGACACAAGCTTTCTTTGAGGGCTTTAATGAAATTCTTCCTCAGCAATATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8
CDS TCA 72 bp	GGGCAACGGACCAAGCGGATCAAATTCTTTGTTTTGTaGTGTAGCAAACAAATCTTGATTCCCATAGATGAA	+
Preference number: 6 (lower is better) Translates to: GQRTKRIKFFVL*CSKQILIPIDE Trigger: TTCATCTATGGGAATCAAGATTTGTTTGCTACATCACAAAACAAAGAATTTGATCCGCTTGGTCCGTTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029126.15 ENSMUST00000109685.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu