Pregenerated sensors for ISOC2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052605Ensembl transcript IDs: ENSMUST00000064547.13, ENSMUST00000208816.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGGAAGACAGAACCACGCCTCCTCTCCCACGGGGGCGGTTCTCCTaGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SEDRTTPPLPRGRFS*RTAPLLGSMDEGKV Trigger: GACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAGAGGAGGCGTGGTTCTGTCTTCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR GCA 90 bp | TCCCACCCAGCATCAAGGAATTTCATTTGCATTTCCGGGACCAGCTaGCCAATCGGAAGACAGAACCACGCCTCCTCTCCCACGGGGGCG | + |
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Preference number: 1 (lower is better) Translates to: SHPASRNFICISGTS*PIGRQNHASSPTGA Trigger: CGCCCCCGTGGGAGAGGAGGCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTGATGCTGGGTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CCA 90 bp | CTCCTCTCCCACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTaGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LLSHGGGSPGGLHHS*DPWMKEKSSINVWV Trigger: CACCCAGACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAGAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CCA 90 bp | CACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATaGATGAAGGAAAAGTCATCCATCAACGTCTGGGTGACAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: HGGGSPGGLHHSWDP*MKEKSSINVWVTRR Trigger: CCTCCTTGTCACCCAGACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAATTTCATTTGCATTTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCCCATCAACGTCTGGGTaGCAAGGAGGGTGGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QGISFAFPGPAAQSEDRTPSTSG*QGGWVL Trigger: AAGCACCCACCCTCCTTGTCACCCAGACGTTGATGG...GGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAATTTCATTTGCATTTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCTCATCCATCAACGTCTaGGTGACAAGGAGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QGISFAFPGPAAQSEDRTSSINV*VTRRVG Trigger: ACCCACCCTCCTTGTCACCCAGACGTTGATGGATGA...GGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CAA 90 bp | CACCTTTCTCTAAACCAATTCCCACCCAGCATCAAGGAATTTCATTaGCATTTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCACGC | + |
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Preference number: 2 (lower is better) Translates to: HLSLNQFPPSIKEFH*HFRDQLPNRKTEPR Trigger: GCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTGATGCTGGGTGGGAATTGGTTTAGAGAAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CCA 72 bp | AGAACCACGCCTCCTCTCCCACGGGGGCGGTTCTCCTaGCGGACTGCACCACTCTTGGGATCCATGGATGAA | + |
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Preference number: 3 (lower is better) Translates to: RTTPPLPRGRFS*RTAPLLGSMDE Trigger: TTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAGAGGAGGCGTGGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CCA 72 bp | CACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTaGGATCCATGGATGAAGGAAAAGTCATCCATCAAC | + |
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Preference number: 3 (lower is better) Translates to: HGGGSPGGLHHS*DPWMKEKSSIN Trigger: GTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| 3UTR GCA 72 bp | GCATCAAGGAATTTCATTTGCATTTCCGGGACCAGCTaGCCAATCGGAAGACAGAACCACGCCTCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ASRNFICISGTS*PIGRQNHASSP Trigger: GGGAGAGGAGGCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CCA 72 bp | GGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATaGATGAAGGAAAAGTCATCCATCAACGTCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: GSPGGLHHSWDP*MKEKSSINVWV Trigger: CACCCAGACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| 3UTR TCA 72 bp | CATAAATGTTTATTCTCCGAGACAGGGTCCCAGTTGTaGCATTTGTTCCCCCTCCTTTTCCCGCTTCGTGAA | + |
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Preference number: 3 (lower is better) Translates to: HKCLFSETGSQL*HLFPLLFPLRE Trigger: TTCACGAAGCGGGAAAAGGAGGGGGAACAAATGTCACAACTGGGACCCTGTCTCGGAGAATAAACATTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR TCA 90 bp | TCCTCTCCCACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATATGGTTCGCAGACCCTaGGCACCCAGCTCGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: SSPTGAVLLADCTTLGIHMVRRP*APSSGT Trigger: AGTTCCCGAGCTGGGTGCTCAGGGTCTGCGAACCAT...ATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CCA 90 bp | TTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCACGCCTCCTCTCCCACGGGGCATCCTTCACCAGCTaGAGAATCAGCACCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FRDQLPNRKTEPRLLSHGASFTS*RISTSL Trigger: GAGCGAGGTGCTGATTCTCCAGCTGGTGAAGGATGC...CCCGTGGGAGAGGAGGCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR TCA 90 bp | CACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGCGGTTCATCTCACTTTaGGAAGAACAGGCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: HGGGSPGGLHHSWDPWMKRFISL*EEQAST Trigger: AGTGGATGCCTGTTCTTCTCAAAGTGAGATGAACCG...CTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR GCA 90 bp | GGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGAGGTCCAGAGCTGTGTaGAAGATGCAGCCTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GGSPGGLHHSWDPWMKEKRSRAV*KMQPWV Trigger: GACCCAAGGCTGCATCTTGCACACAGCTCTGGACCT...CTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCCAGCTCGGGAACTGTaGGGCCCAGACCTTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FSWRTAPLLGSMDEGKVIPAREL*GPDLVG Trigger: ACCCACAAGGTCTGGGCCCCACAGTTCCCGAGCTGG...GATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | TTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCACGCCTCCTCTCCCACGGGGAGTTTTTCTTGCCTTaGAAGAAGCCTAACAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FRDQLPNRKTEPRLLSHGEFFLP*KKPNSP Trigger: CGGACTGTTAGGCTTCTTCCAAGGCAAGAAAAACTC...CCCGTGGGAGAGGAGGCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| 3UTR CAA 72 bp | CCACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTaGGGATCCATGGATGAAGGAAAAGTCATCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: PRGRFSWRTAPL*GSMDEGKVIHQ Trigger: TTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR TCA 90 bp | TCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATATGGTTCGCAGACCCTaGGCACCCAGCTCGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: SWRTAPLLGSMDEGKVIHMVRRP*APSSGT Trigger: AGTTCCCGAGCTGGGTGCTCAGGGTCTGCGAACCAT...ATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | CGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTCCAGCTCGGGAACTGTaGGGCCCAGACCTTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RTAPLLGSMDEGKVIHQRPAREL*GPDLVG Trigger: ACCCACAAGGTCTGGGCCCCACAGTTCCCGAGCTGG...ACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR TCA 90 bp | GGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGCGGTTCATCTCACTTTaGGAAGAACAGGCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: GGSPGGLHHSWDPWMKEKRFISL*EEQAST Trigger: AGTGGATGCCTGTTCTTCTCAAAGTGAGATGAACCG...CTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR GCA 90 bp | GGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAACAGGGAGTTTTTCTTaGCTTGGAAGAAGCCTAACA | + |
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Preference number: 4 (lower is better) Translates to: GGGSPGGLHHSWDPWMKETGSFS*LGRSLT Trigger: TGTTAGGCTTCTTCCAAGGCAAGAAAAACTCCCTGT...TTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCGCATCCTTCACCAGCTaGAGAATCAGCACCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FSWRTAPLLGSMDEGKVIASFTS*RISTSL Trigger: GAGCGAGGTGCTGATTCTCCAGCTGGTGAAGGATGC...GATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR GCA 90 bp | CGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTAGGTCCAGAGCTGTGTaGAAGATGCAGCCTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RTAPLLGSMDEGKVIHQRRSRAV*KMQPWV Trigger: GACCCAAGGCTGCATCTTGCACACAGCTCTGGACCT...ACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | GGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTCTCCTTGAACTGTGGGTaGGCAGCATCCTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLHHSWDPWMKEKSSINVSLNCG*AASFTS Trigger: GCTGGTGAAGGATGCTGCCCACCCACAGTTCAAGGA...GACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | CACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTCTGGGTGTCCTTGAACTGTGGGTaGGCAGCATCCTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: HHSWDPWMKEKSSINVWVSLNCG*AASFTS Trigger: GCTGGTGAAGGATGCTGCCCACCCACAGTTCAAGGA...CACCCAGACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCACATAGGAACAGGATaGAGGACTCTGGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: SWRTAPLLGSMDEGKVIHHIGTG*RTLGRS Trigger: GGATCTTCCCAGAGTCCTCCATCCTGTTCCTATGTG...ATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGCATCAAGGAATTTCATTTGCATTTCCGGGACCAGCTGCCCAATCGGAACACATAGGAACAGGATaGAGGACTCTGGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TQHQGISFAFPGPAAQSEHIGTG*RTLGRS Trigger: GGATCTTCCCAGAGTCCTCCATCCTGTTCCTATGTG...TTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTGATGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CCA 90 bp | CGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTTGCAAGATGCAGCCTTaGGTCTCAATGCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RTAPLLGSMDEGKVIHQRCKMQP*VSMPQS Trigger: ACTCTGTGGCATTGAGACCCAAGGCTGCATCTTGCA...ACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR TCA 90 bp | CACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTCTGGGTGTCCTTGAGGATCTTCTaGATCTCCTTGAACTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HHSWDPWMKEKSSINVWVSLRIF*ISLNCG Trigger: CCCACAGTTCAAGGAGATTCAGAAGATCCTCAAGGA...CACCCAGACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCGAGTTTTTCTTGCCTTaGAAGAAGCCTAACAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FSWRTAPLLGSMDEGKVIEFFLP*KKPNSP Trigger: CGGACTGTTAGGCTTCTTCCAAGGCAAGAAAAACTC...GATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR GCA 90 bp | CCAGCATCAAGGAATTTCATTTGCATTTCCGGGACCAGCTGCCCAATCGGAAGAACAGGGAGTTTTTCTTaGCTTGGAAGAAGCCTAACA | + |
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Preference number: 4 (lower is better) Translates to: PASRNFICISGTSCPIGRTGSFS*LGRSLT Trigger: TGTTAGGCTTCTTCCAAGGCAAGAAAAACTCCCTGT...TCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTGATGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CAA 90 bp | AACCACGCCTCCTCTCCCACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTTGTGGGGCCCAGACCTaGTGGGTAATGCTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: NHASSPTGAVLLADCTTLCGAQT*WVMLCQ Trigger: CTGACAGAGCATTACCCACAAGGTCTGGGCCCCACA...AAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAGAGGAGGCGTGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CAA 90 bp | CTCCCACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATTTTGTCCAACTCCTGTaGAAGCGGGGGCACCATGCT | + |
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Preference number: 5 (lower is better) Translates to: LPRGRFSWRTAPLLGSMDFVQLL*KRGHHA Trigger: AGCATGGTGCCCCCGCTTCAACAGGAGTTGGACAAA...ATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CAA 90 bp | CGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGATTTGTCCAACTCCTGTaGAAGCGGGGGCACCATGCT | + |
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Preference number: 5 (lower is better) Translates to: RGRFSWRTAPLLGSMDEGFVQLL*KRGHHA Trigger: AGCATGGTGCCCCCGCTTCAACAGGAGTTGGACAAA...TCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS CCA 90 bp | TTTTGCTCATGGTTCGCAGACCCTGAGCACCCAGCTCGGGAACTGTaGGGCCCAGACCTTGTGGGTAATGCTCTGTCAGCAAGACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: FCSWFADPEHPAREL*GPDLVGNALSARRG Trigger: TCCCCGTCTTGCTGACAGAGCATTACCCACAAGGTCTGGGCCCCACAGTTCCCGAGCTGGGTGCTCAGGGTCTGCGAACCATGAGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CAA 90 bp | TTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCACGCCTCCTCTCCCACGGGCCGGTTCATCTCACTTaGAGAAGAACAGGCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: FRDQLPNRKTEPRLLSHGPVHLT*RRTGIH Trigger: GTGGATGCCTGTTCTTCTCAAAGTGAGATGAACCGG...CCCGTGGGAGAGGAGGCGTGGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS-3UTR CAA 90 bp | CGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAACAGGGAGTTTTTCTaGCCTTGGAAGAAGCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: RGRFSWRTAPLLGSMDEGNREFF*PWKKPN Trigger: GTTAGGCTTCTTCCAAGGCAAGAAAAACTCCCTGTT...TCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CAA 90 bp | CACGGGGGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGAACAGGGAGTTTTTCTaGCCTTGGAAGAAGCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: HGGGSPGGLHHSWDPWMKNREFF*PWKKPN Trigger: GTTAGGCTTCTTCCAAGGCAAGAAAAACTCCCTGTT...CTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCCCCCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS CCA 90 bp | GTCTGTGACTGGCTCCTTGAGGATCTTCTGAATCTCCTTGAACTGTaGGTGGGCAGCATCCTTCACCAGCTGGAGAATCAGCACCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: VCDWLLEDLLNLLEL*VGSILHQLENQHLA Trigger: AGCGAGGTGCTGATTCTCCAGCTGGTGAAGGATGCTGCCCACCCACAGTTCAAGGAGATTCAGAAGATCCTCAAGGAGCCAGTCACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CAA 90 bp | GGCGGTTCTCCTGGCGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGCCGGTTCATCTCACTTaGAGAAGAACAGGCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: GGSPGGLHHSWDPWMKEKPVHLT*RRTGIH Trigger: GTGGATGCCTGTTCTTCTCAAAGTGAGATGAACCGG...CTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCGCCAGGAGAACCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS TCA 90 bp | AAGCCTAACAGTCCGATGTCTGTGACTGGCTCCTTGAGGATCTTCTaGATCTCCTTGAACTGTGGGTGGGCAGCATCCTTCACCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KPNSPMSVTGSLRIF*ISLNCGWAASFTSW Trigger: CCAGCTGGTGAAGGATGCTGCCCACCCACAGTTCAAGGAGATTCAGAAGATCCTCAAGGAGCCAGTCACAGACATCGGACTGTTAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CAA 90 bp | CGGACTGCACCACTCTTGGGATCCATGGATGAAGGAAAAGTCATCCATCAACGTTGTGGGGCCCAGACCTaGTGGGTAATGCTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RTAPLLGSMDEGKVIHQRCGAQT*WVMLCQ Trigger: CTGACAGAGCATTACCCACAAGGTCTGGGCCCCACA...ACGTTGATGGATGACTTTTCCTTCATCCATGGATCCCAAGAGTGGTGCAGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS-3UTR CAA 90 bp | CAAGGAATTTCATTTGCATTTCCGGGACCAGCTGCCCAATCGGAAGACAGAACCGTGCAAGATGCAGCCTaGGGTCTCAATGCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: QGISFAFPGPAAQSEDRTVQDAA*GLNATE Trigger: CTCTGTGGCATTGAGACCCAAGGCTGCATCTTGCAC...GGTTCTGTCTTCCGATTGGGCAGCTGGTCCCGGAAATGCAAATGAAATTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064547.13 |
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| CDS CCA 72 bp | TGGTTCGCAGACCCTGAGCACCCAGCTCGGGAACTGTaGGGCCCAGACCTTGTGGGTAATGCTCTGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WFADPEHPAREL*GPDLVGNALSA Trigger: TGCTGACAGAGCATTACCCACAAGGTCTGGGCCCCACAGTTCCCGAGCTGGGTGCTCAGGGTCTGCGAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS TCA 72 bp | ATGCTGAAGGACGTTTTGCTCATGGTTCGCAGACCCTaGGCACCCAGCTCGGGAACTGTGGGGCCCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: MLKDVLLMVRRP*APSSGTVGPRP Trigger: AGGTCTGGGCCCCACAGTTCCCGAGCTGGGTGCTCAGGGTCTGCGAACCATGAGCAAAACGTCCTTCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS CAA 72 bp | CTGAGCACCCAGCTCGGGAACTGTGGGGCCCAGACCTaGTGGGTAATGCTCTGTCAGCAAGACGGGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: LSTQLGNCGAQT*WVMLCQQDGDF Trigger: GAAATCCCCGTCTTGCTGACAGAGCATTACCCACAAGGTCTGGGCCCCACAGTTCCCGAGCTGGGTGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS CCA 72 bp | TCCAGGAGGTCCAGAGCTGTGTGCAAGATGCAGCCTTaGGTCTCAATGCCACAGAGTAGCACGGACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SRRSRAVCKMQP*VSMPQSSTDCS Trigger: GCTGCAGTCCGTGCTACTCTGTGGCATTGAGACCCAAGGCTGCATCTTGCACACAGCTCTGGACCTCCTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS TCA 72 bp | AGTCCGATGTCTGTGACTGGCTCCTTGAGGATCTTCTaGATCTCCTTGAACTGTGGGTGGGCAGCATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPMSVTGSLRIF*ISLNCGWAASF Trigger: GAAGGATGCTGCCCACCCACAGTTCAAGGAGATTCAGAAGATCCTCAAGGAGCCAGTCACAGACATCGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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| CDS CCA 72 bp | GTCCTGGAGTTGGGCAACAGGGAGTTTTTCTTGCCTTaGAAGAAGCCTAACAGTCCGATGTCTGTGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: VLELGNREFFLP*KKPNSPMSVTG Trigger: GCCAGTCACAGACATCGGACTGTTAGGCTTCTTCCAAGGCAAGAAAAACTCCCTGTTGCCCAACTCCAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064547.13 ENSMUST00000208816.2 |
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