Pregenerated sensors for ISOC2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000086784Ensembl transcript IDs: ENSMUST00000125249.3
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACACACTGCCTATCCTGCAGATGTGGCCTCTGTTGGCCCAGCCTaGAGGTGGGAAGAGGCACCCCCTCTCCTCAACCTCCAAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: AHTAYPADVASVGPA*RWEEAPPLLNLQRP Trigger: GGGTCTTTGGAGGTTGAGGAGAGGGGGTGCCTCTTCCCACCTCCAGGCTGGGCCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 90 bp | GACATGGGGACAGCCAGAAACTCAAGACGCACACACTGCCTATCCTaGAGATGTGGCCTCTGTTGGCCCAGCCTGGAGGTGGGAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: DMGTARNSRRTHCLS*RCGLCWPSLEVGRG Trigger: GCCTCTTCCCACCTCCAGGCTGGGCCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 90 bp | GGAAACCTGTCCCTGCCACACTGTCTGATTTTCCAGGCCCTTCTCTaGCACCTCGGTGCAAACCTGCACAACGTGGATGTGAGGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: GNLSLPHCLIFQALL*HLGANLHNVDVRAC Trigger: GCAGGCCCTCACATCCACGTTGTGCAGGTTTGCACCGAGGTGCCAGAGAAGGGCCTGGAAAATCAGACAGTGTGGCAGGGACAGGTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 90 bp | CCGTGCAAGGGCTTCATGAGGGAAACCTGTCCCTGCCACACTGTCTaGTTTTCCAGGCCCTTCTCTGGCACCTCGGTGCAAACCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: PCKGFMRETCPCHTV*FSRPFSGTSVQTCT Trigger: TGTGCAGGTTTGCACCGAGGTGCCAGAGAAGGGCCTGGAAAATCAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 90 bp | CTGACTCCACTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACTaGCCGTGCAAGGGCTTCATGAGGGAAACCTGTCCCTGCCACACT | + |
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Preference number: 1 (lower is better) Translates to: LTPLHPRLPLHSFMD*PCKGFMRETCPCHT Trigger: AGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 90 bp | GGCTTCCTCTCCATAGCTTTATGGACTGCCCGTGCAAGGGCTTCATaGGGGAAACCTGTCCCTGCCACACTGTCTGATTTTCCAGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GFLSIALWTARARAS*GKPVPATLSDFPGP Trigger: AGGGCCTGGAAAATCAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 90 bp | AATCCTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGATTaGTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: NPGGWRDGSVVKSTD*SSEGPEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCAGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 90 bp | AAGAACAGTGCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTaGCTCCACTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACT | + |
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Preference number: 1 (lower is better) Translates to: KNSASVSSMASPTPS*LHSTLGFLSIALWT Trigger: AGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 90 bp | TTTTTGATCATCGTGCTTTGTCTCAGCAGCCGAAACCCTAAGACATaGGGACAGCCAGAAACTCAAGACGCACACACTGCCTATCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FLIIVLCLSSRNPKT*GQPETQDAHTAYPA Trigger: TGCAGGATAGGCAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTCTTAGGGTTTCGGCTGCTGAGACAAAGCACGATGATCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 90 bp | AAGGAAAGAAAACAAATCCTGTGTCTAGCGTATCCACACGGTATATaGTACACACCAGGTAATCACTTAGGCACCATCTCAGTTAACAGA | + |
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Preference number: 1 (lower is better) Translates to: KERKQILCLAYPHGI*YTPGNHLGTISVNR Trigger: TCTGTTAACTGAGATGGTGCCTAAGTGATTACCTGGTGTGTAGCATATACCGTGTGGATACGCTAGACACAGGATTTGTTTTCTTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGTGAGGGCCTGCCTCGTGGAGAGGGGCCAGCGGGGTTGTACTATCTGAGAAATAGCACACTTCTGTaGCCTCTACATCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GCEGLPRGEGPAGLYYLRNSTLL*PLHQLL Trigger: CAGGAGCTGATGTAGAGGCCACAGAAGTGTGCTATT...TCTCAGATAGTACAACCCCGCTGGCCCCTCTCCACGAGGCAGGCCCTCACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAACAGTGCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTGACTCCGCCCATTGTGGGGGTTaGCAGGCGGTTCTGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: RRTVHLSLQWHLRHPADSAHCGG*QAVLDS Trigger: AGAGTCCAGAACCGCCTGGCAACCCCCACAATGGGC...GGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | GGACTGCCCGTGCAAGGGCTTCATGAGGGAAACCTGTCCCTGCCACACTGTCTGTGTTTACTCAGAATATaGGTCCCAGTCTGTGACACT | + |
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Preference number: 2 (lower is better) Translates to: GLPVQGLHEGNLSLPHCLCLLRI*VPVCDT Trigger: AGTGTCACAGACTGGGACCCATATTCTGAGTAAACA...CAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | AGATGGGGTGTATGGCTGGTTTTGTGTGTCAACTGGACACAAGCTAGACTCATCAGATGTGGCCTCTGTTaGCCCAGCCTGGAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RWGVWLVLCVNWTQARLIRCGLC*PSLEVG Trigger: TCCCACCTCCAGGCTGGGCCAACAGAGGCCACATCT...GATGAGTCTAGCTTGTGTCCAGTTGACACACAAAACCAGCCATACACCCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCGAAACCCTAAGACATGGGGACAGCCAGAAACTCAAGACGCACACACTGCTCAGGAGTCTCATTTaGATTTCCAGGACCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AAETLRHGDSQKLKTHTLLRSLI*ISRTSS Trigger: ACTGCTGGTCCTGGAAATGCAAATGAGACTCCTGAG...CAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTCTTAGGGTTTCGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR GCA 90 bp | GTACTATCTGAGATGGGGTGTATGGCTGGTTTTGTGTGTCAACTGGACACAAGCTCTCCTTCTCTCACCTaGACACCCCCAGTAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VLSEMGCMAGFVCQLDTSSPSLT*TPPVAP Trigger: AGGGGCTACTGGGGGTGTGCAGGTGAGAGAAGGAGA...GCTTGTGTCCAGTTGACACACAAAACCAGCCATACACCCCATCTCAGATAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCCACTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACTGCCCGTGCAAGAGGCTGAGCAAACCATaGGAAGCAAGGCCTACAATA | + |
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Preference number: 2 (lower is better) Translates to: TPLHPRLPLHSFMDCPCKRLSKP*EARPTI Trigger: TATTGTAGGCCTTGCTTCCCATGGTTTGCTCAGCCT...CTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAACAGTGCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTGACTCCCGAAACCCTAAGACATaGGGACAGCCAGAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: RRTVHLSLQWHLRHPADSRNPKT*GQPETQ Trigger: TTGAGTTTCTGGCTGTCCCCATGTCTTAGGGTTTCG...GGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR GCA 90 bp | CATCCACTGGCAAATATTATGCTGTTAGAAAACAAATCCTGGGGGCTGGAGAGAACACACTGCCTATCCTaGAGATGTGGCCTCTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: HPLANIMLLENKSWGLERTHCLS*RCGLCW Trigger: CCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGT...TCTCTCCAGCCCCCAGGATTTGTTTTCTAACAGCATAATATTTGCCAGTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR TCA 90 bp | TCACAGCCATTTGTAATTGGATCTGATGCTCTCTTCTGGTGTATGTCTGAAGATGAGGAACCGCCTCCATaGGATCCAGCTGTAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SQPFVIGSDALFWCMSEDEEPPP*DPAVRH Trigger: ATGCCTTACAGCTGGATCTCATGGAGGCGGTTCCTC...ATCTTCAGACATACACCAGAAGAGAGCATCAGATCCAATTACAAATGGCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CCA 90 bp | TCACAGCCATTTGTAATTGGATCTGATGCTCTCTTCTGGTGTATGTCTGAAGATGATGGGGTGTATGGCTaGTTTTGTGTGTCAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: SQPFVIGSDALFWCMSEDDGVYG*FCVSTG Trigger: TCCAGTTGACACACAAAACCAGCCATACACCCCATC...ATCTTCAGACATACACCAGAAGAGAGCATCAGATCCAATTACAAATGGCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCACTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACTGCCCGTGCAAGCAGATGTGGCCTCTGTaGGCCCAGCCTGGAGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: TPLHPRLPLHSFMDCPCKQMWPL*AQPGGG Trigger: CCCACCTCCAGGCTGGGCCAACAGAGGCCACATCTG...CTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | ACAGCCAGAAACTCAAGACGCACACACTGCCTATCCTaGAGATGTGGCCTCTGTTGGCCCAGCCTGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: TARNSRRTHCLS*RCGLCWPSLEV Trigger: CACCTCCAGGCTGGGCCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGTGCGTCTTGAGTTTCTGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | GACATGGGGACAGCCAGAAACTCAAGACGCACACACTaGCTATCCTGCAGATGTGGCCTCTGTTGGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: DMGTARNSRRTH*LSCRCGLCWPS Trigger: GCTGGGCCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | CTGTCTGATTTTCCAGGCCCTTCTCTGGCACCTCGGTaGAAACCTGCACAACGTGGATGTGAGGGCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LSDFPGPSLAPR*KPAQRGCEGLP Trigger: AGGCAGGCCCTCACATCCACGTTGTGCAGGTTTGCACCGAGGTGCCAGAGAAGGGCCTGGAAAATCAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 72 bp | AAACTCAAGACGCACACACTGCCTATCCTGCAGATGTaGCCTCTGTTGGCCCAGCCTGGAGGTGGGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KLKTHTLPILQM*PLLAQPGGGKR Trigger: CCTCTTCCCACCTCCAGGCTGGGCCAACAGAGGCCACATCTGCAGGATAGGCAGTGTGTGCGTCTTGAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 72 bp | GGCTTCATGAGGGAAACCTGTCCCTGCCACACTGTCTaGTTTTCCAGGCCCTTCTCTGGCACCTCGGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GFMRETCPCHTV*FSRPFSGTSVQ Trigger: TTGCACCGAGGTGCCAGAGAAGGGCCTGGAAAATCAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | CTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACTaGCCGTGCAAGGGCTTCATGAGGGAAACCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LHPRLPLHSFMD*PCKGFMRETCP Trigger: GGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 72 bp | TCCCTGCCACACTGTCTGATTTTCCAGGCCCTTCTCTaGCACCTCGGTGCAAACCTGCACAACGTGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: SLPHCLIFQALL*HLGANLHNVDV Trigger: CACATCCACGTTGTGCAGGTTTGCACCGAGGTGCCAGAGAAGGGCCTGGAAAATCAGACAGTGTGGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 72 bp | GCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTaGCTCCACTCCACCCTAGGCTTCCTCTCCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: ASVSSMASPTPS*LHSTLGFLSIA Trigger: AGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CAA 90 bp | GTACTATCTGAGATGGGGTGTATGGCTGGTTTTGTGTGTCAACTGGACACAAGCGAGGGTCATAGCCCATaGTGGGGGTTGCCAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: VLSEMGCMAGFVCQLDTSEGHSP*WGLPGG Trigger: ACCGCCTGGCAACCCCCACAATGGGCTATGACCCTC...GCTTGTGTCCAGTTGACACACAAAACCAGCCATACACCCCATCTCAGATAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 72 bp | TTTCTCCTGAGAAGAACAGTGCATCTGTCTCTTCAATaGCATCTCCGACACCCAGCTGACTCCACTCCACCC | + |
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Preference number: 3 (lower is better) Translates to: FLLRRTVHLSLQ*HLRHPADSTPP Trigger: GGGTGGAGTGGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTTCTCAGGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CAA 90 bp | TTGCCCTTTGCTTATGAGGTAGACCTAAGCAGAGTCCCCTCTCCACCTCTCTTCACTCAGGAGTCTCATTaGCATTTCCAGGACCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LPFAYEVDLSRVPSPPLFTQESH*HFQDQQ Trigger: CTGCTGGTCCTGGAAATGCAAATGAGACTCCTGAGT...GAAGAGAGGTGGAGAGGGGACTCTGCTTAGGTCTACCTCATAAGCAAAGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 72 bp | TCCATAGCTTTATGGACTGCCCGTGCAAGGGCTTCATaGGGGAAACCTGTCCCTGCCACACTGTCTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: SIALWTARARAS*GKPVPATLSDF Trigger: AAAATCAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCCATAAAGCTATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGATTaGTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSVVKSTD*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR-3UTR CAA 90 bp | TGGAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCGAAGGTCCTGAGTCCCCAACCTGCTTTTaGATCATCGTGCTTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WRDGSVVKSTDCSSEGPESPTCF*IIVLCL Trigger: GAGACAAAGCACGATGATCAAAAAGCAGGTTGGGGA...CTCAGGACCTTCGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 72 bp | CGAGAGAAAACAGCCTCAGGTGAGGAACCGCCTCCATaGGATCCAGCTGTAAGGCATTTCTCAGTTAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: REKTASGEEPPP*DPAVRHFSVSD Trigger: ATCACTAACTGAGAAATGCCTTACAGCTGGATCTCATGGAGGCGGTTCCTCACCTGAGGCTGTTTTCTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR GCA 72 bp | CTGCCGTCTGGTTCCAGCTATGATCTGCTAAGTGTATaGCAAGAAAACCCTTTCCTCCCCAACCTGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: LPSGSSYDLLSV*QENPFLPNLLF Trigger: AAAAAGCAGGTTGGGGAGGAAAGGGTTTTCTTGGCATACACTTAGCAGATCATAGCTGGAACCAGACGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CCA 72 bp | TCACAGCCATTTGTAATTGGATCTGATGCTCTCTTCTaGTGTATGTCTGAAGATAGCTGCAGTGTACTCATA | + |
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Preference number: 3 (lower is better) Translates to: SQPFVIGSDALF*CMSEDSCSVLI Trigger: TATGAGTACACTGCAGCTATCTTCAGACATACACCAGAAGAGAGCATCAGATCCAATTACAAATGGCTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR TCA 72 bp | AGAAATAAAGCATTCGTCTTAATTTACATTCCGTTCTaGACAGTATGGAACAGTATGCCATCCACTGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: RNKAFVLIYIPF*TVWNSMPSTGK Trigger: TTTGCCAGTGGATGGCATACTGTTCCATACTGTTCAGAACGGAATGTAAATTAAGACGAATGCTTTATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CCA 90 bp | GGACTGCCCGTGCAAGGGCTTCATGAGGGAAACCTGTCCCTGCCACACTGTCTGCCAGCTCAGGAACTGTaGGGCCCAGGCCTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLPVQGLHEGNLSLPHCLPAQEL*GPGLLG Trigger: ACCCAGAAGGCCTGGGCCCCACAGTTCCTGAGCTGG...CAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR TCA 90 bp | GGACTGCCCGTGCAAGGGCTTCATGAGGGAAACCTGTCCCTGCCACACTGTCTGTCACGAGCTGCAGAATaGGCGATTCGCTGGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLPVQGLHEGNLSLPHCLSRAAE*AIRWWR Trigger: TCGCCACCAGCGAATCGCTCATTCTGCAGCTCGTGA...CAGACAGTGTGGCAGGGACAGGTTTCCCTCATGAAGCCCTTGCACGGGCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CCA 90 bp | GCAGCCGAAACCCTAAGACATGGGGACAGCCAGAAACTCAAGACGCACACACTGAGGGGGCTCTGGCCTTaGAAGAGGCTCAGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: AAETLRHGDSQKLKTHTLRGLWP*KRLSSP Trigger: CGGGCTGCTGAGCCTCTTCCAAGGCCAGAGCCCCCT...CAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTCTTAGGGTTTCGGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR TCA 90 bp | GCAGCCGAAACCCTAAGACATGGGGACAGCCAGAAACTCAAGACGCACACACTGCAGAGTAGCACAGACTaGAGCTGGGACCTGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: AAETLRHGDSQKLKTHTLQSSTD*SWDLPS Trigger: AGATGGCAGGTCCCAGCTTCAGTCTGTGCTACTCTG...CAGTGTGTGCGTCTTGAGTTTCTGGCTGTCCCCATGTCTTAGGGTTTCGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CCA 90 bp | TGGAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCGAAGGTCCTGAGTCCTTGAACTGGGGGTaGGAGGCATCCCTCACGAGC | + |
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Preference number: 4 (lower is better) Translates to: WRDGSVVKSTDCSSEGPESLNWG*EASLTS Trigger: GCTCGTGAGGGATGCCTCCCACCCCCAGTTCAAGGA...CTCAGGACCTTCGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR GCA 90 bp | TATGAGGTAGACCTAAGCAGAGTCCCCTCTCCACCTCTCTTCAGTCAACCCCCGAGGCCTTCTGGGTACTaGTCTGTCAGCAAAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: YEVDLSRVPSPPLFSQPPRPSGY*SVSKMG Trigger: CCCCATTTTGCTGACAGAGCAGTACCCAGAAGGCCT...CGGGGGTTGACTGAAGAGAGGTGGAGAGGGGACTCTGCTTAGGTCTACCTCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR TCA 90 bp | AGAAGAACAGTGCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTGACTCCTCTTCTGAATCTCCTTaGACTGGGGGTGGGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RRTVHLSLQWHLRHPADSSSESP*TGGGRH Trigger: ATGCCTCCCACCCCCAGTTCAAGGAGATTCAGAAGA...GGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR GCA 90 bp | CATCCACTGGCAAATATTATGCTGTTAGAAAACAAATCCTGGGGGCTGGAGAGATCTCATCCGGGCCAGTaGCACCAGCCGGTCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: HPLANIMLLENKSWGLERSHPGQ*HQPVNL Trigger: CAGGTTGACCGGCTGGTGGCACTGGCCCGGATGAGA...TCTCTCCAGCCCCCAGGATTTGTTTTCTAACAGCATAATATTTGCCAGTGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR GCA 90 bp | AGAAGAACAGTGCATCTGTCTCTTCAATGGCATCTCCGACACCCAGCTGACTCCACTGAAGCTGGGACCTaGCATCTAGCTCCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RRTVHLSLQWHLRHPADSTEAGT*HLAPSV Trigger: TACAGAAGGAGCTAGATGGCAGGTCCCAGCTTCAGT...GGAGTCAGCTGGGTGTCGGAGATGCCATTGAAGAGACAGATGCACTGTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| 3UTR CAA 72 bp | TCTCAGTTAGTGATCAATGTGGAGGGTCATAGCCCATaGTGGGGGTTGCCAGGCGGTTCTGGACTCTATAAG | + |
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Preference number: 4 (lower is better) Translates to: SQLVINVEGHSP*WGLPGGSGLYK Trigger: CTTATAGAGTCCAGAACCGCCTGGCAACCCCCACAATGGGCTATGACCCTCCACATTGATCACTAACTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CCA 90 bp | CATCCACTGGCAAATATTATGCTGTTAGAAAACAAATCCTGGGGGCTGGAGAGACACATAGGAACAGGATaGAGGACTCTGGGAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: HPLANIMLLENKSWGLERHIGTG*RTLGGS Trigger: GGATCCTCCCAGAGTCCTCCATCCTGTTCCTATGTG...TCTCTCCAGCCCCCAGGATTTGTTTTCTAACAGCATAATATTTGCCAGTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR TCA 90 bp | TCACAGCCATTTGTAATTGGATCTGATGCTCTCTTCTGGTGTATGTCTGAAGATCATCCGAGCAGCCACTaGCACGATCTGTGGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SQPFVIGSDALFWCMSEDHPSSH*HDLWEV Trigger: TACTTCCCACAGATCGTGTCAGTGGCTGCTCGGATG...ATCTTCAGACATACACCAGAAGAGAGCATCAGATCCAATTACAAATGGCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CCA 90 bp | CATCCACTGGCAAATATTATGCTGTTAGAAAACAAATCCTGGGGGCTGGAGAGATTCAAGATGCAGGCTTaGGTCTCGATGCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HPLANIMLLENKSWGLERFKMQA*VSMPQS Trigger: ACTCTGTGGCATCGAGACCCAAGCCTGCATCTTGAA...TCTCTCCAGCCCCCAGGATTTGTTTTCTAACAGCATAATATTTGCCAGTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS TCA 90 bp | AGGCTCAGCAGCCCGCTGTCCGGGACCGGCTCCTTAATGATCTTCTaGATCTCCTTGAACTGGGGGTGGGAGGCATCCCTCACGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RLSSPLSGTGSLMIF*ISLNWGWEASLTSC Trigger: GCAGCTCGTGAGGGATGCCTCCCACCCCCAGTTCAAGGAGATTCAGAAGATCATTAAGGAGCCGGTCCCGGACAGCGGGCTGCTGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS GCA 90 bp | TTCGCTGGTGGCGAGGAAAGCTCCACTCTGTCTCATCCGGGCCAGTaGCACCAGCCGGTCAACCTGGCTTCGAGAAGAACAGGCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: FAGGEESSTLSHPGQ*HQPVNLASRRTGIH Trigger: GTGGATGCCTGTTCTTCTCGAAGCCAGGTTGACCGGCTGGTGGCACTGGCCCGGATGAGACAGAGTGGAGCTTTCCTCGCCACCAGCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CAA 90 bp | ACTCCACTCCACCCTAGGCTTCCTCTCCATAGCTTTATGGACTGCCCGTGCAAGGAGGGGGCTCTGGCCTaGGAAGAGGCTCAGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: TPLHPRLPLHSFMDCPCKEGALA*EEAQQP Trigger: GGGCTGCTGAGCCTCTTCCAAGGCCAGAGCCCCCTC...CTTGCACGGGCAGTCCATAAAGCTATGGAGAGGAAGCCTAGGGTGGAGTGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS CCA 90 bp | TCTTACTCACTGGCCGAATGCCCTGAGCGCCCAGCTCAGGAACTGTaGGGCCCAGGCCTTCTGGGTACTGCTCTGTCAGCAAAATGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SYSLAECPERPAQEL*GPGLLGTALSAKWG Trigger: TCCCCATTTTGCTGACAGAGCAGTACCCAGAAGGCCTGGGCCCCACAGTTCCTGAGCTGGGCGCTCAGGGCATTCGGCCAGTGAGTAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS GCA 90 bp | GAACCTGCAGTCCCCGGTGAAGTAGGTCCAGAGCTGTGTTCAAGATaGAGGCTTGGGTCTCGATGCCACAGAGTAGCACAGACTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: EPAVPGEVGPELCSR*RLGSRCHRVAQTEA Trigger: AGCTTCAGTCTGTGCTACTCTGTGGCATCGAGACCCAAGCCTGCATCTTGAACACAGCTCTGGACCTACTTCACCGGGGACTGCAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS-3UTR CAA 90 bp | TTGCCCTTTGCTTATGAGGTAGACCTAAGCAGAGTCCCCTCTCCACCTCTCTTCGTTCAAGATGCAGGCTaGGGTCTCGATGCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LPFAYEVDLSRVPSPPLFVQDAG*GLDATE Trigger: CTCTGTGGCATCGAGACCCAAGCCTGCATCTTGAAC...GAAGAGAGGTGGAGAGGGGACTCTGCTTAGGTCTACCTCATAAGCAAAGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS CCA 72 bp | CTGGCCGAATGCCCTGAGCGCCCAGCTCAGGAACTGTaGGGCCCAGGCCTTCTGGGTACTGCTCTGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LAECPERPAQEL*GPGLLGTALSA Trigger: TGCTGACAGAGCAGTACCCAGAAGGCCTGGGCCCCACAGTTCCTGAGCTGGGCGCTCAGGGCATTCGGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS TCA 72 bp | ATACTGAAGCAGGTCTTACTCACTGGCCGAATGCCCTaGGCGCCCAGCTCAGGAACTGTGGGGCCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ILKQVLLTGRMP*APSSGTVGPRP Trigger: AGGCCTGGGCCCCACAGTTCCTGAGCTGGGCGCTCAGGGCATTCGGCCAGTGAGTAAGACCTGCTTCAGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS GCA 72 bp | GGCGAGGAAAGCTCCACTCTGTCTCATCCGGGCCAGTaGCACCAGCCGGTCAACCTGGCTTCGAGAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: GEESSTLSHPGQ*HQPVNLASRRT Trigger: TGTTCTTCTCGAAGCCAGGTTGACCGGCTGGTGGCACTGGCCCGGATGAGACAGAGTGGAGCTTTCCTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS GCA 72 bp | GTCCCCGGTGAAGTAGGTCCAGAGCTGTGTTCAAGATaGAGGCTTGGGTCTCGATGCCACAGAGTAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: VPGEVGPELCSR*RLGSRCHRVAQ Trigger: CTGTGCTACTCTGTGGCATCGAGACCCAAGCCTGCATCTTGAACACAGCTCTGGACCTACTTCACCGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS TCA 72 bp | TGCCATCTAGCTCCTTCTGTAAGGCGGGCACCATACTaGAGCAGGTCTTACTCACTGGCCGAATGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CHLAPSVRRAPY*SRSYSLAECPE Trigger: CTCAGGGCATTCGGCCAGTGAGTAAGACCTGCTTCAGTATGGTGCCCGCCTTACAGAAGGAGCTAGATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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| CDS TCA 72 bp | CAGGCTTGGGTCTCGATGCCACAGAGTAGCACAGACTaGAGCTGGGACCTGCCATCTAGCTCCTTCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QAWVSMPQSSTD*SWDLPSSSFCK Trigger: CTTACAGAAGGAGCTAGATGGCAGGTCCCAGCTTCAGTCTGTGCTACTCTGTGGCATCGAGACCCAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125249.3 |
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