Pregenerated sensors for ISOC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024601Ensembl transcript IDs: ENSMUST00000025503.10, ENSMUST00000238139.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGACTCCAACACTGAGAGAGGAGGAGATACACGAGCCAGAGTCCTaGTTCTCAATTCTCACCCAGGAGTCATTGGCCAGTCAGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ATPTLREEEIHEPES*FSILTQESLASQPE Trigger: CTCAGGCTGACTGGCCAATGACTCCTGGGTGAGAATTGAGAACCAGGACTCTGGCTCGTGTATCTCCTCCTCTCTCAGTGTTGGAGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR TCA 90 bp | CGCTCCTTAAGCCAATGCACCTCACTCAGTCAGCGACTCCAACACTaGGAGAGGAGGAGATACACGAGCCAGAGTCCTGGTTCTCAATTC | + |
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Preference number: 1 (lower is better) Translates to: RSLSQCTSLSQRLQH*ERRRYTSQSPGSQF Trigger: GAATTGAGAACCAGGACTCTGGCTCGTGTATCTCCTCCTCTCTCAGTGTTGGAGTCGCTGACTGAGTGAGGTGCATTGGCTTAAGGAGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 90 bp | GCTCAAATAACAGAACACATTTCTACAGTGCTAACAGGAAAACCCTaGAGGAACGCTATCAGTCTGGGCCTGCAGAGGATTCCCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: AQITEHISTVLTGKP*RNAISLGLQRIPLL Trigger: AAGGAGGGGAATCCTCTGCAGGCCCAGACTGATAGCGTTCCTGCAGGGTTTTCCTGTTAGCACTGTAGAAATGTGTTCTGTTATTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 90 bp | CTCACCCAGGAGTCATTGGCCAGTCAGCCTGAGAAGCAAAATCACTaGGTATACACTGACATGACAAGGGATGCTTCACAACAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LTQESLASQPEKQNH*VYTDMTRDASQQKK Trigger: TTTCTTTTGTTGTGAAGCATCCCTTGTCATGTCAGTGTATACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTCCTGGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 90 bp | AGAGGCATGGGTACAAGGGAGGGAAACCTTCCTACATTAATTCCTTaGATTGCCAGTGGTAATGCCTTTTTATTTTTAACGAAGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGMGTREGNLPTLIP*IASGNAFLFLTKGE Trigger: CTCTCCCTTCGTTAAAAATAAAAAGGCATTACCACTGGCAATGCAAGGAATTAATGTAGGAAGGTTTCCCTCCCTTGTACCCATGCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 90 bp | AATACTTCACCAGAGGGTGCACTTTGGAAAGATATGGTCAGAGTATaGAGTATAGACGAGACAGGCACCTCCATGGTAATTTGTCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: NTSPEGALWKDMVRV*SIDETGTSMVICLN Trigger: ATTAAGACAAATTACCATGGAGGTGCCTGTCTCGTCTATACTGCATACTCTGACCATATCTTTCCAAAGTGCACCCTCTGGTGAAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 90 bp | AAAAAGACTGTATGTTTGGGCAAACCTCTGTCAATGACCCAGCACTaGAAACCACTCCCATCTGTTTACAAGTTTAAAATAACCAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KKTVCLGKPLSMTQH*KPLPSVYKFKITKE Trigger: CTCCTTGGTTATTTTAAACTTGTAAACAGATGGGAGTGGTTTGCAGTGCTGGGTCATTGACAGAGGTTTGCCCAAACATACAGTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACGCTATCAGTCTGGGCCTGCAGAGGATTCCCCTCCTTTGAAGGTTCCACCAGAGGGTGCACTTTaGAAAGATATGGTCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: QERYQSGPAEDSPPLKVPPEGAL*KDMVRV Trigger: TACTCTGACCATATCTTTCCAAAGTGCACCCTCTGG...TGGAACCTTCAAAGGAGGGGAATCCTCTGCAGGCCCAGACTGATAGCGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR TCA 90 bp | GGTGTTAAGGCTGCAGGTGGAATACGGTTGCTAATTAGAAACCTTAAATCACATCAGCGACTCCAACACTaGGAGAGGAGGAGATACACG | + |
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Preference number: 2 (lower is better) Translates to: GVKAAGGIRLLIRNLKSHQRLQH*ERRRYT Trigger: CGTGTATCTCCTCCTCTCTCAGTGTTGGAGTCGCTG...ATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CAA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATaGGAACTAAACACTTGTACACAACGGTCTAGCCAGGTAAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KSSLRRREAAPEAST*ELNTCTQRSSQVRV Trigger: AACCCTTACCTGGCTAGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGTCATTGGCCAGTCAGCCTGAGAAGCAAAATCACTGGGTATACACTGACCAAAGAAGGAGCTGTTaGCTTGACATAGTAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: QESLASQPEKQNHWVYTDQRRSC*LDIVVL Trigger: TAGAACTACTATGTCAAGTCAACAGCTCCTTCTTTG...GTCAGTGTATACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CAA 90 bp | AGAGATACATGGCCAAAGGGTGTTAAGGCTGCAGGTGGAATACGGTaGCTAATTAGAAACCTTAAATCACATGAGATCTTAGGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RDTWPKGVKAAGGIR*LIRNLKSHEILGQA Trigger: AGCCTGGCCTAAGATCTCATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACCCTTTGGCCATGTATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCAATTCCTGTGTATAGTAAAAGATGCACTCAAAAAGACTGTATGTTTGGGAAGAGAAGCAGCACCTaGAGCCTCGACATTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: PPIPVYSKRCTQKDCMFGKRSST*SLDIGT Trigger: AGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTT...CCCAAACATACAGTCTTTTTGAGTGCATCTTTTACTATACACAGGAATTGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCAATTCCTGTGTATAGTAAAAGATGCACTCAAAAAGACTGTATGTTTGGGATTGGCCAGTCAGCCTaGGAAGCAAAATCACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PPIPVYSKRCTQKDCMFGIGQSA*EAKSLG Trigger: ACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAAT...CCCAAACATACAGTCTTTTTGAGTGCATCTTTTACTATACACAGGAATTGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTACAAAGAAGGAGCTGTTaGCTTGACATAGTAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: KSSLRRREAAPEASTLELQRRSC*LDIVVL Trigger: TAGAACTACTATGTCAAGTCAACAGCTCCTTCTTTG...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACCCAGCACTGCAAACCACTCCCATCTGTTTACAAGTTTAAAATAACCAAGTACTTCACCAGAGGGTaGACTTTGGAAAGATATGGT | + |
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Preference number: 2 (lower is better) Translates to: MTQHCKPLPSVYKFKITKYFTRG*TLERYG Trigger: ACCATATCTTTCCAAAGTGCACCCTCTGGTGAAGTA...CTTGGTTATTTTAAACTTGTAAACAGATGGGAGTGGTTTGCAGTGCTGGGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR TCA 90 bp | GGTGTTAAGGCTGCAGGTGGAATACGGTTGCTAATTAGAAACCTTAAATCACATAGAACCCTACAGAATTaGGATGAAACAGTCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: GVKAAGGIRLLIRNLKSHRTLQN*DETVCC Trigger: ACAACAGACTGTTTCATCTCAATTCTGTAGGGTTCT...ATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | GGGCAGCCAGAGGACACTAATCGGAGGCCCCAGAGATaGCTTCAGCTGTGGAAGAGGCATGGGTACAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GQPEDTNRRPQR*LQLWKRHGYKG Trigger: TCCCTTGTACCCATGCCTCTTCCACAGCTGAAGCCATCTCTGGGGCCTCCGATTAGTGTCCTCTGGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | GACACTAATCGGAGGCCCCAGAGATGGCTTCAGCTGTaGAAGAGGCATGGGTACAAGGGAGGGAAACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: DTNRRPQRWLQL*KRHGYKGGKPS Trigger: GGAAGGTTTCCCTCCCTTGTACCCATGCCTCTTCCACAGCTGAAGCCATCTCTGGGGCCTCCGATTAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | ACACTGAGAGAGGAGGAGATACACGAGCCAGAGTCCTaGTTCTCAATTCTCACCCAGGAGTCATTGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TLREEEIHEPES*FSILTQESLAS Trigger: ACTGGCCAATGACTCCTGGGTGAGAATTGAGAACCAGGACTCTGGCTCGTGTATCTCCTCCTCTCTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | CAGAGTCCTGGTTCTCAATTCTCACCCAGGAGTCATTaGCCAGTCAGCCTGAGAAGCAAAATCACTGGGTAT | + |
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Preference number: 3 (lower is better) Translates to: QSPGSQFSPRSH*PVSLRSKITGY Trigger: ATACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTCCTGGGTGAGAATTGAGAACCAGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | CATGCCTTAATCCCTAGATCCTGGAACAGAGATACATaGCCAAAGGGTGTTAAGGCTGCAGGTGGAATACGG | + |
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Preference number: 3 (lower is better) Translates to: HALIPRSWNRDT*PKGVKAAGGIR Trigger: CCGTATTCCACCTGCAGCCTTAACACCCTTTGGCCATGTATCTCTGTTCCAGGATCTAGGGATTAAGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 72 bp | ACAGAACACATTTCTACAGTGCTAACAGGAAAACCCTaGAGGAACGCTATCAGTCTGGGCCTGCAGAGGATT | + |
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Preference number: 3 (lower is better) Translates to: TEHISTVLTGKP*RNAISLGLQRI Trigger: AATCCTCTGCAGGCCCAGACTGATAGCGTTCCTGCAGGGTTTTCCTGTTAGCACTGTAGAAATGTGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | CTGTGTGAAGATGCCCATGCCTTAATCCCTAGATCCTaGAACAGAGATACATGGCCAAAGGGTGTTAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LCEDAHALIPRS*NRDTWPKGVKA Trigger: AGCCTTAACACCCTTTGGCCATGTATCTCTGTTCCAGGATCTAGGGATTAAGGCATGGGCATCTTCACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR CAA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTAAGTGGAGACAAGGGCTaGTGTGGTTTGCAGTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: KSSLRRREAAPEASTLELSGDKG*CGLQSH Trigger: ATGAGACTGCAAACCACACAAGCCCTTGTCTCCACT...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR TCA 72 bp | GGGTTACTAAGAGCCGCAAAGAAGGAGCTGTTGACTTaGCATAGTAGTTCTAGTGGAGACAAGGGCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GLLRAAKKELLT*HSSSSGDKGLC Trigger: ACACAAGCCCTTGTCTCCACTAGAACTACTATGTCAAGTCAACAGCTCCTTCTTTGCGGCTCTTAGTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR GCA 72 bp | CCAGAGGGTGCACTTTGGAAAGATATGGTCAGAGTATaGAGTATAGACGAGACAGGCACCTCCATGGTAATT | + |
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Preference number: 3 (lower is better) Translates to: PEGALWKDMVRV*SIDETGTSMVI Trigger: AATTACCATGGAGGTGCCTGTCTCGTCTATACTGCATACTCTGACCATATCTTTCCAAAGTGCACCCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | GAGTCATTGGCCAGTCAGCCTGAGAAGCAAAATCACTaGGTATACACTGACATGACAAGGGATGCTTCACAA | + |
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Preference number: 3 (lower is better) Translates to: ESLASQPEKQNH*VYTDMTRDASQ Trigger: TTGTGAAGCATCCCTTGTCATGTCAGTGTATACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR CAA 90 bp | ATAACTAAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGAGTGGAGACAAGGGCTaGTGTGGTTTGCAGTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: ITKSSLRRREAAPEASTLSGDKG*CGLQSH Trigger: ATGAGACTGCAAACCACACAAGCCCTTGTCTCCACT...CAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTTAGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR GCA 72 bp | ATCCCTTATACAGGGCCCCAGAAAAGATCATTGCCTTaGAATACAAGCTTTGATCTCAGCACACAGAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: IPYTGPQKRSLP*NTSFDLSTQKA Trigger: GGCTTTCTGTGTGCTGAGATCAAAGCTTGTATTGCAAGGCAATGATCTTTTCTGGGGCCCTGTATAAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR TCA 72 bp | TCTCAGCACACAGAAAGCCCTAGAACCCTACAGAATTaGGATGAAACAGTCTGTTGTCTTGAGACATGGTGT | + |
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Preference number: 3 (lower is better) Translates to: SQHTESPRTLQN*DETVCCLETWC Trigger: ACACCATGTCTCAAGACAACAGACTGTTTCATCTCAATTCTGTAGGGTTCTAGGGCTTTCTGTGTGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 72 bp | AAGTCATCCCTTATACAGGGCCCCAGAAAAGATCATTaGCTTGCAATACAAGCTTTGATCTCAGCACACAGA | + |
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Preference number: 3 (lower is better) Translates to: KSSLIQGPRKDH*LAIQALISAHR Trigger: TCTGTGTGCTGAGATCAAAGCTTGTATTGCAAGGCAATGATCTTTTCTGGGGCCCTGTATAAGGGATGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 72 bp | ACAACTGAGCACACCAAGAAGAACACTAGGCAATGGTaGCTTACCAAGGCTCAAATAACAGAACACATTTCT | + |
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Preference number: 3 (lower is better) Translates to: TTEHTKKNTRQW*LTKAQITEHIS Trigger: AGAAATGTGTTCTGTTATTTGAGCCTTGGTAAGGCACCATTGCCTAGTGTTCTTCTTGGTGTGCTCAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR CCA 72 bp | AGAACAACTGAGCACACCAAGAAGAACACTAGGCAATaGTGCCTTACCAAGGCTCAAATAACAGAACACATT | + |
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Preference number: 3 (lower is better) Translates to: RTTEHTKKNTRQ*CLTKAQITEHI Trigger: AATGTGTTCTGTTATTTGAGCCTTGGTAAGGCACCATTGCCTAGTGTTCTTCTTGGTGTGCTCAGTTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR-3UTR CAA 90 bp | CACACCAAGAAGAACACTAGGCAATGGTGCCTTACCAAGGCTCAAATAACAGAAGACAGATACACAATATaGAAGATAATTTGCGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: HTKKNTRQWCLTKAQITEDRYTI*KIICAP Trigger: AGGAGCGCAAATTATCTTCAATATTGTGTATCTGTC...TTCTGTTATTTGAGCCTTGGTAAGGCACCATTGCCTAGTGTTCTTCTTGGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 72 bp | GGTACAAGGGAGGGAAACCTTCCTACATTAATTCCTTaGATTGCCAGTGGTAATGCCTTTTTATTTTTAACG | + |
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Preference number: 3 (lower is better) Translates to: GTREGNLPTLIP*IASGNAFLFLT Trigger: CGTTAAAAATAAAAAGGCATTACCACTGGCAATGCAAGGAATTAATGTAGGAAGGTTTCCCTCCCTTGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR TCA 72 bp | ATTGATTGGTTAACAATGACCACAGTATTACCCCTATaGGTCTGGTTGATGATGTCAGCCATAACAATGTTT | + |
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Preference number: 3 (lower is better) Translates to: IDWLTMTTVLPL*VWLMMSAITMF Trigger: AAACATTGTTATGGCTGACATCATCAACCAGACTCATAGGGGTAATACTGTGGTCATTGTTAACCAATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| 3UTR GCA 72 bp | TTTCTTTCTCCACCAATTCCTGTGTATAGTAAAAGATaGACTCAAAAAGACTGTATGTTTGGGCAAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLSPPIPVYSKR*TQKDCMFGQTS Trigger: AGAGGTTTGCCCAAACATACAGTCTTTTTGAGTGCATCTTTTACTATACACAGGAATTGGTGGAGAAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR CCA 90 bp | CAGGAACGCTATCAGTCTGGGCCTGCAGAGGATTCCCCTCCTTTGAAGGTTCCATCACCGCGAAGCCCTTaGGCAGGTCCACGTACTGAC | + |
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Preference number: 4 (lower is better) Translates to: QERYQSGPAEDSPPLKVPSPRSP*AGPRTD Trigger: GTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGA...TGGAACCTTCAAAGGAGGGGAATCCTCTGCAGGCCCAGACTGATAGCGTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR TCA 90 bp | CACATTTCTACAGTGCTAACAGGAAAACCCTGCAGGAACGCTATCAGTCTGGGCGGCAGGTCCACGTACTaGCCCCACTCCTCGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HISTVLTGKPCRNAISLGGRSTY*PHSSAK Trigger: CTTCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCC...GCCCAGACTGATAGCGTTCCTGCAGGGTTTTCCTGTTAGCACTGTAGAAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTGCACCAGGCGCAGCTTaGAGCGCTCGCTCACCGCGA | + |
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Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSAPGAA*SARSPR Trigger: TCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGC...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS-3UTR TCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTCGGTGCATGTCGAGCTaGTCGCCGTACAGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSRCMSS*SPYRLR Trigger: CCTGAGCCTGTACGGCGATCAGCTCGACATGCACCG...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| 3UTR CAA 72 bp | CATAGTAGTTCTAGTGGAGACAAGGGCTTGTGTGGTTaGCAGTCTCATCGCCTGGAGGGAAGGAGGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: HSSSSGDKGLCG*QSHRLEGRRTL Trigger: CAGGGTCCTCCTTCCCTCCAGGCGATGAGACTGCAAACCACACAAGCCCTTGTCTCCACTAGAACTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS-3UTR TCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTTCAGGAACTTCTGGATaGGCACGTCGTAGCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSSGTSG*ARRSPR Trigger: GCGCGGGCTACGACGTGCTCATCCAGAAGTTCCTGA...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCCTGCAGGAACGCTATCAGTCTGGGCCTGCAGAGGATTCCCCTCCTTTAAGATCCGAGCTCCTTaGAACAGTCTCTGTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: ENPAGTLSVWACRGFPSFKIRAP*NSLCPT Trigger: TGTGGGACAGAGACTGTTGCAAGGAGCTCGGATCTT...AAAGGAGGGGAATCCTCTGCAGGCCCAGACTGATAGCGTTCCTGCAGGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTCGATGTGAACCTCGATaGCTCGGCCGACCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSRCEPR*LGRPAP Trigger: TGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCG...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS-3UTR CCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTTCACCGCGAAGCCCTTaGGCAGGTCCACGTACTGAC | + |
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Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSSPRSP*AGPRTD Trigger: GTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGA...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTTCCTCGGCGAAGAGCTaGACCACGAATTTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSSSAKS*TTNLRC Trigger: GCACCGCAAATTCGTGGTGCAGCTCTTCGCCGAGGA...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTTAAGGCTGCAGGTGGAATACGGTTGCTAATTAGAAACCTTAAATCACATGCACCAGGCGCAGCTTaGAGCGCTCGCTCACCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVKAAGGIRLLIRNLKSHAPGAA*SARSPR Trigger: TCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGC...ATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | CACACCAAGAAGAACACTAGGCAATGGTGCCTTACCAAGGCTCAAATAACAGAAGTCGTAAGCTGGATCTaGAGCGGCACCAGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTKKNTRQWCLTKAQITEVVSWI*SGTRRS Trigger: GCTGCGCCTGGTGCCGCTGCAGATCCAGCTTACGAC...TTCTGTTATTTGAGCCTTGGTAAGGCACCATTGCCTAGTGTTCTTCTTGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTACCTTGCAACTGGATCTaGAGCGGCACCAGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRRREAAPEASTLELPCNWI*SGTRRS Trigger: GCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGG...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTATCAGGAACTTCTGGATaGGCACGTCGTAGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRRREAAPEASTLELSGTSG*ARRSPR Trigger: GCGCGGGCTACGACGTGCTCATCCAGAAGTTCCTGA...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTCTACAGTGCTAACAGGAAAACCCTGCAGGAACGCTATCAGTCTGGGCAGCTCCAGGGCAGTTTaGTGGATACACACGTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HISTVLTGKPCRNAISLGSSRAV*WIHTCV Trigger: AACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCT...GCCCAGACTGATAGCGTTCCTGCAGGGTTTTCCTGTTAGCACTGTAGAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTAAGATCCGAGCTCCTTaGAACTGGATCTGCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSKIRAP*NWICSG Trigger: GCCGCTGCAGATCCAGTTGCAAGGAGCTCGGATCTT...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
||
| 3UTR CAA 72 bp | CCAGAGTCCTGGTTCTCAATTCTCACCCAGGAGTCATaGGCCAGTCAGCCTGAGAAGCAAAATCACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PESWFSILTQES*ASQPEKQNHWV Trigger: TACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTCCTGGGTGAGAATTGAGAACCAGGACTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR TCA 90 bp | GGTGTTAAGGCTGCAGGTGGAATACGGTTGCTAATTAGAAACCTTAAATCACATCGGTGCATGTCGAGCTaGTCGCCGTACAGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKAAGGIRLLIRNLKSHRCMSS*SPYRLR Trigger: CCTGAGCCTGTACGGCGATCAGCTCGACATGCACCG...ATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTGCTGCACCACGAATTTaGGGTGCATGTCGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSAAPRI*GACRAD Trigger: ATCAGCTCGACATGCACCGCAAATTCGTGGTGCAGC...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTAGCTCCAGGGCAGTTTaGTGGATACACACGTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSSSRAV*WIHTCV Trigger: AACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCT...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTACATCCTGTCCATCATaGTTCTCGAGGAGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSTSCPS*FSRRWR Trigger: ACGCCACCTCCTCGAGAAGCATGATGGACAGGATGT...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAACGCTATCAGTCTGGGCCTGCAGAGGATTCCCCTCCTTTGAAGGTTCCAAAAGTATTTGATGGCTaGACGGAACCTTTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QERYQSGPAEDSPPLKVPKVFDG*TEPFLH Trigger: ATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTT...TGGAACCTTCAAAGGAGGGGAATCCTCTGCAGGCCCAGACTGATAGCGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| 3UTR CAA 72 bp | GGCCAGGCTAAGAAGGGACCTAAGGACCCGCACTTGTaGCCTGAGAAGATGGAAGTAATGGGACAAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQAKKGPKDPHL*PEKMEVMGQNK Trigger: TTTGTTTTGTCCCATTACTTCCATCTTCTCAGGCAACAAGTGCGGGTCCTTAGGTCCCTTCTTAGCCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTCGATTTCTTGAACGGTaGTGCCAAGTCCTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAAPEASTLELNTCTQRSRFLER*CQVLWG Trigger: ACCCCAAAGGACTTGGCAGCACCGTTCAAGAAATCG...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | ATGACCCAGCACTGCAAACCACTCCCATCTGTTTACAAGTTTAAAATAACCAAGCGATGTGAACCTCGATaGCTCGGCCGACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTQHCKPLPSVYKFKITKRCEPR*LGRPAP Trigger: TGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCG...CTTGGTTATTTTAAACTTGTAAACAGATGGGAGTGGTTTGCAGTGCTGGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGGTGCACTTTGGAAAGATATGGTCAGAGTATGCAGTATAGACGAGACATCCAGGGCAGTTTGCTaGATACACACGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEGALWKDMVRVCSIDETSRAVC*IHTCVS Trigger: AGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGA...TGTCTCGTCTATACTGCATACTCTGACCATATCTTTCCAAAGTGCACCCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTATCCAGGGCAGTTTGCTaGATACACACGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRRREAAPEASTLELSRAVC*IHTCVS Trigger: AGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGA...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| 3UTR CAA 72 bp | TTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATaGGAACTAAACACTTGTACACAACGGTCTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRRREAAPEAST*ELNTCTQRSSQ Trigger: CTGGCTAGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTAATTAGAAACCTTAAATCACATGAGATCTTAGGCCAGGCTAAGAAGGGAGCTGCACCACGAATTTaGGGTGCATGTCGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLIRNLKSHEILGQAKKGAAPRI*GACRAD Trigger: ATCAGCTCGACATGCACCGCAAATTCGTGGTGCAGC...TCCCTTCTTAGCCTGGCCTAAGATCTCATGTGATTTAAGGTTTCTAATTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTAATTAGAAACCTTAAATCACATGAGATCTTAGGCCAGGCTAAGAAGGGAACATCCTGTCCATCATaGTTCTCGAGGAGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLIRNLKSHEILGQAKKGTSCPS*FSRRWR Trigger: ACGCCACCTCCTCGAGAAGCATGATGGACAGGATGT...TCCCTTCTTAGCCTGGCCTAAGATCTCATGTGATTTAAGGTTTCTAATTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR TCA 90 bp | ATGACCCAGCACTGCAAACCACTCCCATCTGTTTACAAGTTTAAAATAACCAAGTGTCCCCAAAGTATTTaGTGGCTGGACGGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTQHCKPLPSVYKFKITKCPQSI*WLDGTF Trigger: AAAGGTTCCGTCCAGCCATCAAATACTTTGGGGACA...CTTGGTTATTTTAAACTTGTAAACAGATGGGAGTGGTTTGCAGTGCTGGGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR TCA 90 bp | ATAACTAAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGGTTCTGAATTTCCTTaGACTTCGGGTGGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITKSSLRRREAAPEASTLGSEFP*TSGGLC Trigger: ACAAAGACCACCCGAAGTTCAAGGAAATTCAGAACC...CAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTTAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTTAAGGCTGCAGGTGGAATACGGTTGCTAATTAGAAACCTTAAATCACATGGTTCTGAATTTCCTTaGACTTCGGGTGGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVKAAGGIRLLIRNLKSHGSEFP*TSGGLC Trigger: ACAAAGACCACCCGAAGTTCAAGGAAATTCAGAACC...ATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTAAGAAAACTTGGTCTTTaGAAGAACCAGTTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KSSLRRREAAPEASTLELRKLGL*KNQFHT Trigger: GGTGTGAAACTGGTTCTTCCAAAGACCAAGTTTTCT...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| 3UTR CAA 72 bp | TGGCCAAAGGGTGTTAAGGCTGCAGGTGGAATACGGTaGCTAATTAGAAACCTTAAATCACATGAGATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WPKGVKAAGGIR*LIRNLKSHEIL Trigger: TAAGATCTCATGTGATTTAAGGTTTCTAATTAGCAACCGTATTCCACCTGCAGCCTTAACACCCTTTGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGTGTATAGTAAAAGATGCACTCAAAAAGACTGTATGTTTGGGCAAACCGGACGGAACCTTTCCTaGATGTCACAGCAGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPVYSKRCTQKDCMFGQTGRNLS*MSQQKN Trigger: GTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCC...GGTTTGCCCAAACATACAGTCTTTTTGAGTGCATCTTTTACTATACACAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| 3UTR CAA 72 bp | ATGCAATCAAGACAGATACACAATATTGAAGATAATTaGCGCTCCTTAAGCCAATGCACCTCACTCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQSRQIHNIEDN*RSLSQCTSLSQ Trigger: CTGACTGAGTGAGGTGCATTGGCTTAAGGAGCGCAAATTATCTTCAATATTGTGTATCTGTCTTGATTGCAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| 3UTR CAA 72 bp | TGTATAGTAAAAGATGCACTCAAAAAGACTGTATGTTaGGGCAAACCTCTGTCAATGACCCAGCACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CIVKDALKKTVC*GKPLSMTQHCK Trigger: TTTGCAGTGCTGGGTCATTGACAGAGGTTTGCCCAAACATACAGTCTTTTTGAGTGCATCTTTTACTATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTAATTAGAAACCTTAAATCACATGAGATCTTAGGCCAGGCTAAGAAGGGAAGAAAACTTGGTCTTTaGAAGAACCAGTTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LLIRNLKSHEILGQAKKGRKLGL*KNQFHT Trigger: GGTGTGAAACTGGTTCTTCCAAAGACCAAGTTTTCT...TCCCTTCTTAGCCTGGCCTAAGATCTCATGTGATTTAAGGTTTCTAATTAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS TCA 90 bp | GGTGCATGTCGAGCTGATCGCCGTACAGGCTCAGGAACTTCTGGATaGGCACGTCGTAGCCCGCGCCGTGGGGCACCGACGCGGGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GACRADRRTGSGTSG*ARRSPRRGAPTRAA Trigger: CGCGGCCCGCGTCGGTGCCCCACGGCGCGGGCTACGACGTGCTCATCCAGAAGTTCCTGAGCCTGTACGGCGATCAGCTCGACATGCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS CCA 90 bp | GCGGCACCAGGCGCAGCTTGCAGCGCTCGCTCACCGCGAAGCCCTTaGGCAGGTCCACGTACTGACCCCACTCCTCGGCGAAGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPGAACSARSPRSP*AGPRTDPTPRRRAA Trigger: TGCAGCTCTTCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS GCA 90 bp | TCCGAGCTCCTTGCAACTGGATCTGCAGCGGCACCAGGCGCAGCTTaGAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGGTCCACGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SELLATGSAAAPGAA*SARSPRSPWAGPRT Trigger: AGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGGAGCTCGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
||
| CDS TCA 90 bp | TTGCAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGGTCCACGTACTaGCCCCACTCCTCGGCGAAGAGCTGCACCACGAATTTGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQRSLTAKPLGRSTY*PHSSAKSCTTNLRC Trigger: GCACCGCAAATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS TCA 90 bp | ATCCTGTCCATCATGCTTCTCGAGGAGGTGGCGTCCGCGACGATGTaGACCTCGATGCCTCGGCCGACCAGCTCCAGGGCAGTTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILSIMLLEEVASATM*TSMPRPTSSRAVCW Trigger: CCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGATGGACAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS GCA 90 bp | TCATGCTTCTCGAGGAGGTGGCGTCCGCGACGATGTGAACCTCGATaGCTCGGCCGACCAGCTCCAGGGCAGTTTGCTGGATACACACGT | + |
|
Preference number: 5 (lower is better) Translates to: SCFSRRWRPRRCEPR*LGRPAPGQFAGYTR Trigger: ACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS CCA 90 bp | GACGCTCAAGAGCAAACATCCTGTCCATCATGCTTCTCGAGGAGGTaGCGTCCGCGACGATGTGAACCTCGATGCCTCGGCCGACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DAQEQTSCPSCFSRR*RPRRCEPRCLGRPA Trigger: AGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGATGGACAGGATGTTTGCTCTTGAGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCATTGGCCAGTCAGCCTGAGAAGCAAAATCACTGGGTATACACTGACGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QESLASQPEKQNHWVYTDGTRRS*QRSLTA Trigger: CGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCC...GTCAGTGTATACCCAGTGATTTTGCTTCTCAGGCTGACTGGCCAATGACTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS GCA 90 bp | CCACGTACTGACCCCACTCCTCGGCGAAGAGCTGCACCACGAATTTaGGGTGCATGTCGAGCTGATCGCCGTACAGGCTCAGGAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRTDPTPRRRAAPRI*GACRADRRTGSGTS Trigger: AGAAGTTCCTGAGCCTGTACGGCGATCAGCTCGACATGCACCGCAAATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGTCAGTACGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS GCA 90 bp | TCCCAGTGCGGGCAAGACGCTCAAGAGCAAACATCCTGTCCATCATaGTTCTCGAGGAGGTGGCGTCCGCGACGATGTGAACCTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SQCGQDAQEQTSCPS*FSRRWRPRRCEPRC Trigger: GCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGATGGACAGGATGTTTGCTCTTGAGCGTCTTGCCCGCACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EAAPEASTLELNTCTQRSGTRRS*QRSLTA Trigger: CGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCC...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS CCA 90 bp | TCCGTTATGATAACTGGAATCCCTAAGATCCGAGCTCCTTGCAACTaGATCTGCAGCGGCACCAGGCGCAGCTTGCAGCGCTCGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SVMITGIPKIRAPCN*ICSGTRRSLQRSLT Trigger: GGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGGAGCTCGGATCTTAGGGATTCCAGTTATCATAACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
||
| CDS GCA 90 bp | TATTGTTCCGTTATGATAACTGGAATCCCTAAGATCCGAGCTCCTTaGAACTGGATCTGCAGCGGCACCAGGCGCAGCTTGCAGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: YCSVMITGIPKIRAP*NWICSGTRRSLQRS Trigger: CGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGGAGCTCGGATCTTAGGGATTCCAGTTATCATAACGGAACAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
||
| CDS TCA 90 bp | TTAGAAAGCAGACCCGACTCCGGGGCACTCGCCTTAATTAGGTTCTaGATTTCCTTGAACTTCGGGTGGTCTTTGTCAGCCACCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LESRPDSGALALIRF*ISLNFGWSLSATSC Trigger: ACAGCTGGTGGCTGACAAAGACCACCCGAAGTTCAAGGAAATTCAGAACCTAATTAAGGCGAGTGCCCCGGAGTCGGGTCTGCTTTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTACAGTGCTAACAGGAAAACCCTGCAGGAACGCTATCAGTCTGGGCATGTCCCCAAAGTATTaGATGGCTGGACGGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HISTVLTGKPCRNAISLGMSPKY*MAGRNL Trigger: AAGGTTCCGTCCAGCCATCAAATACTTTGGGGACAT...GCCCAGACTGATAGCGTTCCTGCAGGGTTTTCCTGTTAGCACTGTAGAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCACCTGAAGCCTCGACATTGGAACTAAACACTTGTACACAACGGTCTGTGCTGCCAAGTCCTTaGGGGTATTGTTCCGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: EAAPEASTLELNTCTQRSVLPSP*GYCSVM Trigger: CATAACGGAACAATACCCCAAAGGACTTGGCAGCAC...AGACCGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CCA 90 bp | CAGTCTCTGTCCCACACTAATGATGTCCCCAAAGTATTTGATGGCTaGACGGAACCTTTCCTGCATGTCACAGCAGAAAAACACAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: QSLSHTNDVPKVFDG*TEPFLHVTAEKHSA Trigger: AGCACTGTGTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTTGGGGACATCATTAGTGTGGGACAGAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS GCA 90 bp | CTAATGATGTCCCCAAAGTATTTGATGGCTGGACGGAACCTTTCCTaGATGTCACAGCAGAAAAACACAGTGCTCGGAGGTGTGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: LMMSPKYLMAGRNLS*MSQQKNTVLGGVRF Trigger: AAATCTCACACCTCCGAGCACTGTGTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTTGGGGACATCATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR CAA 90 bp | AAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGGAACTAGTGCTGCCAAGTCCTTaGGGGTATTGTTCCGTTATG | + |
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Preference number: 5 (lower is better) Translates to: KSSLRRREAAPEASTLELVLPSP*GYCSVM Trigger: CATAACGGAACAATACCCCAAAGGACTTGGCAGCAC...TAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS TCA 90 bp | TTGGTCTTTGGAAGAACCAGTTTCACACCTGTTAAGTCGATTTCTTaGACGGTGCTGCCAAGTCCTTTGGGGTATTGTTCCGTTATGATA | + |
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Preference number: 5 (lower is better) Translates to: LVFGRTSFTPVKSIS*TVLPSPLGYCSVMI Trigger: TATCATAACGGAACAATACCCCAAAGGACTTGGCAGCACCGTTCAAGAAATCGACTTAACAGGTGTGAAACTGGTTCTTCCAAAGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS GCA 90 bp | TATTGTTCCGTTATGATAACTGGAATCCCTAAGATCCGAGCTCCTTaGAACAGTCTCTGTCCCACACTAATGATGTCCCCAAAGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: YCSVMITGIPKIRAP*NSLCPTLMMSPKYL Trigger: CAAATACTTTGGGGACATCATTAGTGTGGGACAGAGACTGTTGCAAGGAGCTCGGATCTTAGGGATTCCAGTTATCATAACGGAACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR CAA 90 bp | CACACCAAGAAGAACACTAGGCAATGGTGCCTTACCAAGGCTCAAATAACAGAAAACACCATAGAAAACTaGGTCTTTGGAAGAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: HTKKNTRQWCLTKAQITENTIEN*VFGRTS Trigger: ACTGGTTCTTCCAAAGACCAAGTTTTCTATGGTGTT...TTCTGTTATTTGAGCCTTGGTAAGGCACCATTGCCTAGTGTTCTTCTTGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS-3UTR CAA 90 bp | ATAACTAAAAGCTCGTTAAGAAGAAGAGAAGCAGCACCTGAAGCCTCGACATTGAACACCATAGAAAACTaGGTCTTTGGAAGAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: ITKSSLRRREAAPEASTLNTIEN*VFGRTS Trigger: ACTGGTTCTTCCAAAGACCAAGTTTTCTATGGTGTT...CAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTTTAGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CCA 72 bp | GGCGCAGCTTGCAGCGCTCGCTCACCGCGAAGCCCTTaGGCAGGTCCACGTACTGACCCCACTCCTCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GAACSARSPRSP*AGPRTDPTPRR Trigger: TCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CAA 72 bp | GTCGTAAGCTGGATCTGCAGCGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVSWICSGTRRS*QRSLTAKPLGR Trigger: CCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGCTTACGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS CAA 72 bp | CCTTGCAACTGGATCTGCAGCGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PCNWICSGTRRS*QRSLTAKPLGR Trigger: CCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
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| CDS TCA 72 bp | CGAGCTGATCGCCGTACAGGCTCAGGAACTTCTGGATaGGCACGTCGTAGCCCGCGCCGTGGGGCACCGACG | + |
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Preference number: 6 (lower is better) Translates to: RADRRTGSGTSG*ARRSPRRGAPT Trigger: CGTCGGTGCCCCACGGCGCGGGCTACGACGTGCTCATCCAGAAGTTCCTGAGCCTGTACGGCGATCAGCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS GCA 72 bp | CTTGCAACTGGATCTGCAGCGGCACCAGGCGCAGCTTaGAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LATGSAAAPGAA*SARSPRSPWAG Trigger: ACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
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| CDS CAA 90 bp | TTTCCCAGGGTCGTAAGCTGGATCTGCAGCGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGGTCCACGTAC | + |
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Preference number: 6 (lower is better) Translates to: FPRVVSWICSGTRRS*QRSLTAKPLGRSTY Trigger: GTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGCTTACGACCCTGGGAAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS CAA 90 bp | ATCCGAGCTCCTTGCAACTGGATCTGCAGCGGCACCAGGCGCAGCTaGCAGCGCTCGCTCACCGCGAAGCCCTTGGGCAGGTCCACGTAC | + |
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Preference number: 6 (lower is better) Translates to: IRAPCNWICSGTRRS*QRSLTAKPLGRSTY Trigger: GTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGTTGCAAGGAGCTCGGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238139.2 |
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| CDS GCA 72 bp | TCGAGGAGGTGGCGTCCGCGACGATGTGAACCTCGATaGCTCGGCCGACCAGCTCCAGGGCAGTTTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRRWRPRRCEPR*LGRPAPGQFAG Trigger: TCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS TCA 72 bp | TCGCTCACCGCGAAGCCCTTGGGCAGGTCCACGTACTaGCCCCACTCCTCGGCGAAGAGCTGCACCACGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLTAKPLGRSTY*PHSSAKSCTTN Trigger: ATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS TCA 72 bp | ATCATGCTTCTCGAGGAGGTGGCGTCCGCGACGATGTaGACCTCGATGCCTCGGCCGACCAGCTCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: IMLLEEVASATM*TSMPRPTSSRA Trigger: TGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CCA 72 bp | GTGCTCGGAGGTGTGAGATTTCCCAGGGTCGTAAGCTaGATCTGCAGCGGCACCAGGCGCAGCTTGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VLGGVRFPRVVS*ICSGTRRSLQR Trigger: GCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGCTTACGACCCTGGGAAATCTCACACCTCCGAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS GCA 72 bp | GACCCCACTCCTCGGCGAAGAGCTGCACCACGAATTTaGGGTGCATGTCGAGCTGATCGCCGTACAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: DPTPRRRAAPRI*GACRADRRTGS Trigger: TGAGCCTGTACGGCGATCAGCTCGACATGCACCGCAAATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CCA 72 bp | GAGCAAACATCCTGTCCATCATGCTTCTCGAGGAGGTaGCGTCCGCGACGATGTGAACCTCGATGCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: EQTSCPSCFSRR*RPRRCEPRCLG Trigger: GCCGAGGCATCGAGGTTCACATCGTCGCGGACGCCACCTCCTCGAGAAGCATGATGGACAGGATGTTTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS GCA 72 bp | ACCTCGATGCCTCGGCCGACCAGCTCCAGGGCAGTTTaGTGGATACACACGTGCGTTTCTACTCCAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: TSMPRPTSSRAV*WIHTCVSTPNN Trigger: GTTGTTTGGAGTAGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CCA 72 bp | TCGATGCCTCGGCCGACCAGCTCCAGGGCAGTTTGCTaGATACACACGTGCGTTTCTACTCCAAACAACACG | + |
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Preference number: 6 (lower is better) Translates to: SMPRPTSSRAVC*IHTCVSTPNNT Trigger: CGTGTTGTTTGGAGTAGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CAA 90 bp | GACGATGTGAACCTCGATGCCTCGGCCGACCAGCTCCAGGGCAGTTaGCTGGATACACACGTGCGTTTCTACTCCAAACAACACGACACT | + |
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Preference number: 6 (lower is better) Translates to: DDVNLDASADQLQGS*LDTHVRFYSKQHDT Trigger: AGTGTCGTGTTGTTTGGAGTAGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTTCACATCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS TCA 72 bp | AAGAGCTGCACCACGAATTTGCGGTGCATGTCGAGCTaGTCGCCGTACAGGCTCAGGAACTTCTGGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: KSCTTNLRCMSS*SPYRLRNFWMS Trigger: GCTCATCCAGAAGTTCCTGAGCCTGTACGGCGATCAGCTCGACATGCACCGCAAATTCGTGGTGCAGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CAA 72 bp | AACCTCGATGCCTCGGCCGACCAGCTCCAGGGCAGTTaGCTGGATACACACGTGCGTTTCTACTCCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: NLDASADQLQGS*LDTHVRFYSKQ Trigger: TTGTTTGGAGTAGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS TCA 72 bp | AGACCCGACTCCGGGGCACTCGCCTTAATTAGGTTCTaGATTTCCTTGAACTTCGGGTGGTCTTTGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RPDSGALALIRF*ISLNFGWSLSA Trigger: GGCTGACAAAGACCACCCGAAGTTCAAGGAAATTCAGAACCTAATTAAGGCGAGTGCCCCGGAGTCGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS GCA 72 bp | TCCCCAAAGTATTTGATGGCTGGACGGAACCTTTCCTaGATGTCACAGCAGAAAAACACAGTGCTCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPKYLMAGRNLS*MSQQKNTVLGG Trigger: ACCTCCGAGCACTGTGTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS CAA 90 bp | CCTTGCAACAGTCTCTGTCCCACACTAATGATGTCCCCAAAGTATTaGATGGCTGGACGGAACCTTTCCTGCATGTCACAGCAGAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: PCNSLCPTLMMSPKY*MAGRNLSCMSQQKN Trigger: GTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTTGGGGACATCATTAGTGTGGGACAGAGACTGTTGCAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS TCA 72 bp | GGAAGAACCAGTTTCACACCTGTTAAGTCGATTTCTTaGACGGTGCTGCCAAGTCCTTTGGGGTATTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRTSFTPVKSIS*TVLPSPLGYCS Trigger: GGAACAATACCCCAAAGGACTTGGCAGCACCGTTCAAGAAATCGACTTAACAGGTGTGAAACTGGTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS GCA 72 bp | GTTATGATAACTGGAATCCCTAAGATCCGAGCTCCTTaGAACAGTCTCTGTCCCACACTAATGATGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: VMITGIPKIRAP*NSLCPTLMMSP Trigger: TGGGGACATCATTAGTGTGGGACAGAGACTGTTGCAAGGAGCTCGGATCTTAGGGATTCCAGTTATCATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025503.10 |
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| CDS CAA 90 bp | ATCTCGGCTAACGCTGCTTCGACTTCAGGTAACACCATAGAAAACTaGGTCTTTGGAAGAACCAGTTTCACACCTGTTAAGTCGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISANAASTSGNTIEN*VFGRTSFTPVKSIS Trigger: AGAAATCGACTTAACAGGTGTGAAACTGGTTCTTCCAAAGACCAAGTTTTCTATGGTGTTACCTGAAGTCGAAGCAGCGTTAGCCGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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| CDS CAA 72 bp | AACGCTGCTTCGACTTCAGGTAACACCATAGAAAACTaGGTCTTTGGAAGAACCAGTTTCACACCTGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: NAASTSGNTIEN*VFGRTSFTPVK Trigger: CTTAACAGGTGTGAAACTGGTTCTTCCAAAGACCAAGTTTTCTATGGTGTTACCTGAAGTCGAAGCAGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025503.10 ENSMUST00000238139.2 |
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