Pregenerated sensors for ISM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050671Ensembl transcript IDs: ENSMUST00000051601.6, ENSMUST00000125733.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTACTGAGTTCAACCCAAGCCTGGCTGCCATGGCGGTGGTAGCCTaGGCATGTCTATCATCTGGGGACGGGAAACAGCTGGTGGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: STEFNPSLAAMAVVA*ACLSSGDGKQLVVP Trigger: GGGAACCACCAGCTGTTTCCCGTCCCCAGATGATAGACATGCGCAGGCTACCACCGCCATGGCAGCCAGGCTTGGGTTGAACTCAGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 90 bp | CATGTCTATCATCTGGGGACGGGAAACAGCTGGTGGTTCCCTGACTaGAAGCAATCTCCCCTCAGCTCCGCTGACCGCCTCACCACATGG | + |
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Preference number: 1 (lower is better) Translates to: HVYHLGTGNSWWFPD*KQSPLSSADRLTTW Trigger: CCATGTGGTGAGGCGGTCAGCGGAGCTGAGGGGAGATTGCTTCCAGTCAGGGAACCACCAGCTGTTTCCCGTCCCCAGATGATAGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 90 bp | AAGCCTGGCTGCCATGGCGGTGGTAGCCTGCGCATGTCTATCATCTaGGGACGGGAAACAGCTGGTGGTTCCCTGACTGGAAGCAATCTC | + |
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Preference number: 1 (lower is better) Translates to: KPGCHGGGSLRMSII*GRETAGGSLTGSNL Trigger: GAGATTGCTTCCAGTCAGGGAACCACCAGCTGTTTCCCGTCCCCAGATGATAGACATGCGCAGGCTACCACCGCCATGGCAGCCAGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 90 bp | CTGTGTTCTTCCACAACTGGCCCTAGGGTAGATGGGTGGGTGGGGTaGGGGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTG | + |
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Preference number: 1 (lower is better) Translates to: LCSSTTGPRVDGWVG*GSKGFTTDPGNWDV Trigger: CACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACCCCCACCCCACCCACCCATCTACCCTAGGGCCAGTTGTGGAAGAACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR TCA 90 bp | TCCAATATCGGGACCCTCTGCCCTGTCACACTTGCGACAGGTGCATaGTCCCTCCTGAACCCACCCTTAGTACTGAGTTCAACCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: SNIGTLCPVTLATGA*SLLNPPLVLSSTQA Trigger: GGCTTGGGTTGAACTCAGTACTAAGGGTGGGTTCAGGAGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAGAGGGTCCCGATATTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 90 bp | CACATCCAATATCGGGACCCTCTGCCCTGTCACACTTGCGACAGGTaGATGATCCCTCCTGAACCCACCCTTAGTACTGAGTTCAACCCA | + |
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Preference number: 1 (lower is better) Translates to: HIQYRDPLPCHTCDR*MIPPEPTLSTEFNP Trigger: TGGGTTGAACTCAGTACTAAGGGTGGGTTCAGGAGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAGAGGGTCCCGATATTGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 90 bp | AAAGTATGGTTTGGGGATGAGAGGTGTCCGGGAAAAGGCACAGTGTaGTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: KVWFGDERCPGKGTV*WEPKHPSPKSKSSA Trigger: AGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGTGCCTTTTCCCGGACACCTCTCATCCCCAAACCATACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 90 bp | AAGTGCTTTATTGCTGAGGATCCCAGGACAGCTTCTGGACAGCTGTaGATGGGGCTGGAACTCAAGTTCCCTACCAAGCCCCTATCGGAG | + |
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Preference number: 1 (lower is better) Translates to: KCFIAEDPRTASGQL*MGLELKFPTKPLSE Trigger: CTCCGATAGGGGCTTGGTAGGGAACTTGAGTTCCAGCCCCATCCACAGCTGTCCAGAAGCTGTCCTGGGATCCTCAGCAATAAAGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 90 bp | TTGCTGAGGATCCCAGGACAGCTTCTGGACAGCTGTGGATGGGGCTaGAACTCAAGTTCCCTACCAAGCCCCTATCGGAGATTTGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LLRIPGQLLDSCGWG*NSSSLPSPYRRFVN Trigger: ATTCACAAATCTCCGATAGGGGCTTGGTAGGGAACTTGAGTTCCAGCCCCATCCACAGCTGTCCAGAAGCTGTCCTGGGATCCTCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTCTGCCCTAGGGTAGATGGGTaGGTGGGGTGGGGGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: WDRVEAVCHKEGWSPWFCPRVDG*VGWGSK Trigger: CTTAGACCCCCACCCCACCCACCCATCTACCCTAGG...GCAGAACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTCTGCCAGAGGCCTTGTGCCTaGCACACCCTCCAACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: WDRVEAVCHKEGWSPWFCQRPCA*HTLQPS Trigger: AGAAGGTTGGAGGGTGTGTCAGGCACAAGGCCTCTG...GCAGAACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGTGCCACAAGGAGGGGTaGTCACCCTGGTTCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VCWEPKHPSPKSKSSAFRCHKEG*SPWFCQ Trigger: CTGGCAGAACCAGGGTGACCACCCCTCCTTGTGGCA...CCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTGTGTCTGGACCACCTTaGCTCAATCCCGAACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HMGQGRSCVPQGGVVTLVVSGPP*LNPEQR Trigger: CCTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACAC...AACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCGATGGGTGGGTGGGGTaGGGGTCTAAGGGATTCACA | + |
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Preference number: 2 (lower is better) Translates to: TVCWEPKHPSPKSKSSAFDGWVG*GSKGFT Trigger: TGTGAATCCCTTAGACCCCCACCCCACCCACCCATC...GAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGACGCTTGAGTTCTCCTaGCTCAGGGTCATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VCWEPKHPSPKSKSSAFRTLEFS*LRVIRG Trigger: CCCTCTTATGACCCTGAGTCAGGAGAACTCAAGCGT...CCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGGGTCATAAGAGGGAGATATaGATGCCTGACGGCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: KHPSPKSKSSAFRGATRGHKREI*MPDGLS Trigger: TGAGAGGCCGTCAGGCATGCATATCTCCCTCTTATG...ACCCCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGTAGAAGCTGTGTaGCACAAGGAGGGGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TVCWEPKHPSPKSKSSAFRVEAV*HKEGWS Trigger: TGACCACCCCTCCTTGTGGCACACAGCTTCTACCCT...GAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCGAACTGGGATGTGTCTaGACCACCTTGGCTCAATCC | + |
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Preference number: 2 (lower is better) Translates to: TVCWEPKHPSPKSKSSAFELGCV*TTLAQS Trigger: GGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTC...GAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTAGAGGGAAAGACCCATaGCCAAACTGGGATAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLRDSQQILGTGMCLDHLRGKDP*PNWDSS Trigger: GGAGCTATCCCAGTTTGGCCATGGGTCTTTCCCTCT...AAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAACACCATAAATGGCCCACATCCAATATCGGGACCCTCTGCCCTGTCACAATTCACAACAGATCCTaGGAACTGGGATGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: YQHHKWPTSNIGTLCPVTIHNRS*ELGCVW Trigger: CCAGACACATCCCAGTTCCCAGGATCTGTTGTGAAT...TGTGACAGGGCAGAGGGTCCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGCTGCCCTGTCACACTTaGGACAGGTGCATGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: QKVYNISAPEKPRKYGLGLPCHT*DRCMIP Trigger: AGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAG...CCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGAGGACTGTCCTATCTTaGCCCACCCCTCCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IETESLQYFSSRETKKVWRTVLS*PTPPCV Trigger: AACACAGGGAGGGGTGGGGCAAGATAGGACAGTCCT...CCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTGTTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGTACCAACACCATAAATaGCCCACATCCAATATCGGG | + |
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Preference number: 2 (lower is better) Translates to: QKVYNISAPEKPRKYGLGYQHHK*PTSNIG Trigger: CCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA...CCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | GACCGCCTCACCACATGGGACAGGGTAGAAGCTGTGTaGCACAAGGAGGGGTGGTCACCCTGGTTCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: DRLTTWDRVEAV*HKEGWSPWFCQ Trigger: CTGGCAGAACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCATGTGGTGAGGCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | CATCTGGGGACGGGAAACAGCTGGTGGTTCCCTGACTaGAAGCAATCTCCCCTCAGCTCCGCTGACCGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HLGTGNSWWFPD*KQSPLSSADRL Trigger: GAGGCGGTCAGCGGAGCTGAGGGGAGATTGCTTCCAGTCAGGGAACCACCAGCTGTTTCCCGTCCCCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR TCA 72 bp | CCTCCCCTTCCCAACACATCCCAGAGGCCTTGTGCCTaGCACACCCTCCAACCTTCTCACCAGACCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: PPLPNTSQRPCA*HTLQPSHQTLR Trigger: TCTCAGGGTCTGGTGAGAAGGTTGGAGGGTGTGTCAGGCACAAGGCCTCTGGGATGTGTTGGGAAGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | AGCTCCTCCCCTTCCCAACACATCCCAGAGGCCTTGTaGCTGACACACCCTCCAACCTTCTCACCAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: SSSPSQHIPEAL*LTHPPTFSPDP Trigger: AGGGTCTGGTGAGAAGGTTGGAGGGTGTGTCAGGCACAAGGCCTCTGGGATGTGTTGGGAAGGGGAGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | TTCAACCCAAGCCTGGCTGCCATGGCGGTGGTAGCCTaGGCATGTCTATCATCTGGGGACGGGAAACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FNPSLAAMAVVA*ACLSSGDGKQL Trigger: CAGCTGTTTCCCGTCCCCAGATGATAGACATGCGCAGGCTACCACCGCCATGGCAGCCAGGCTTGGGTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | TGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTaGTCACCCTGGTTCTGCCAGCCCAGCAAAAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WDRVEAVCHKEG*SPWFCQPSKKQ Trigger: CTGCTTTTTGCTGGGCTGGCAGAACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | TGCCATGGCGGTGGTAGCCTGCGCATGTCTATCATCTaGGGACGGGAAACAGCTGGTGGTTCCCTGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: CHGGGSLRMSII*GRETAGGSLTG Trigger: TCCAGTCAGGGAACCACCAGCTGTTTCCCGTCCCCAGATGATAGACATGCGCAGGCTACCACCGCCATGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | GGGGATGAGAGGTGTCCGGGAAAAGGCACAGTGTGCTaGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GDERCPGKGTVC*EPKHPSPKSKS Trigger: GGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGTGCCTTTTCCCGGACACCTCTCATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | TCCACAACTGGCCCTAGGGTAGATGGGTGGGTGGGGTaGGGGTCTAAGGGATTCACAACAGATCCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: STTGPRVDGWVG*GSKGFTTDPGN Trigger: GTTCCCAGGATCTGTTGTGAATCCCTTAGACCCCCACCCCACCCACCCATCTACCCTAGGGCCAGTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | CCTGCGCATGTCTATCATCTGGGGACGGGAAACAGCTaGTGGTTCCCTGACTGGAAGCAATCTCCCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: PAHVYHLGTGNS*WFPDWKQSPLS Trigger: GCTGAGGGGAGATTGCTTCCAGTCAGGGAACCACCAGCTGTTTCCCGTCCCCAGATGATAGACATGCGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR TCA 72 bp | GGGACCCTCTGCCCTGTCACACTTGCGACAGGTGCATaGTCCCTCCTGAACCCACCCTTAGTACTGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: GTLCPVTLATGA*SLLNPPLVLSS Trigger: TGAACTCAGTACTAAGGGTGGGTTCAGGAGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAGAGGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | TATCGGGACCCTCTGCCCTGTCACACTTGCGACAGGTaGATGATCCCTCCTGAACCCACCCTTAGTACTGAG | + |
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Preference number: 3 (lower is better) Translates to: YRDPLPCHTCDR*MIPPEPTLSTE Trigger: CTCAGTACTAAGGGTGGGTTCAGGAGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAGAGGGTCCCGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | CACATCCAATATCGGGACCCTCTGCCCTGTCACACTTaGGACAGGTGCATGATCCCTCCTGAACCCACCCTT | + |
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Preference number: 3 (lower is better) Translates to: HIQYRDPLPCHT*DRCMIPPEPTL Trigger: AAGGGTGGGTTCAGGAGGGATCATGCACCTGTCGCAAGTGTGACAGGGCAGAGGGTCCCGATATTGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | TTTGGGGATGAGAGGTGTCCGGGAAAAGGCACAGTGTaGTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FGDERCPGKGTV*WEPKHPSPKSK Trigger: CTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACACTGTGCCTTTTCCCGGACACCTCTCATCCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | AGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATaGCCAAACTGGGATAGCTCCTCCCCTTCCCAACAC | + |
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Preference number: 3 (lower is better) Translates to: RRAPFLERGKDP*PNWDSSSPSQH Trigger: GTGTTGGGAAGGGGAGGAGCTATCCCAGTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | ACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTaGCTCAATCCCGAACAGAGGGAAAGGCAGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: TDPGNWDVSGPP*LNPEQRERQKG Trigger: GCCCTTCTGCCTTTCCCTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | ATCCCAGGACAGCTTCTGGACAGCTGTGGATGGGGCTaGAACTCAAGTTCCCTACCAAGCCCCTATCGGAGA | + |
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Preference number: 3 (lower is better) Translates to: IPGQLLDSCGWG*NSSSLPSPYRR Trigger: TCTCCGATAGGGGCTTGGTAGGGAACTTGAGTTCCAGCCCCATCCACAGCTGTCCAGAAGCTGTCCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR GCA 72 bp | GCAGCTTTAGGGTCAGATGAAAGGACTGTCCTATCTTaGCCCACCCCTCCCTGTGTTCTTCCACAACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: AALGSDERTVLS*PTPPCVLPQLA Trigger: GGCCAGTTGTGGAAGAACACAGGGAGGGGTGGGGCAAGATAGGACAGTCCTTTCATCTGACCCTAAAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR-3UTR CAA 90 bp | TACCAACACCATAAATGGCCCACATCCAATATCGGGACCCTCTGCCCTGTCACAAAGGACTGTCCTATCTaGCCCCACCCCTCCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: YQHHKWPTSNIGTLCPVTKDCPI*PHPSLC Trigger: ACACAGGGAGGGGTGGGGCAAGATAGGACAGTCCTT...TGTGACAGGGCAGAGGGTCCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR CCA 72 bp | GGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTaGACCACCTTGGCTCAATCCCGAACAGAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: GIHNRSWELGCV*TTLAQSRTEGK Trigger: CTTTCCCTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR TCA 72 bp | CAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATaGGAGGTGTCCGGGAAAAGGCACAGTGTGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: QLQRNQESMVWG*EVSGKRHSVLG Trigger: TCCCAGCACACTGTGCCTTTTCCCGGACACCTCTCATCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| 3UTR TCA 72 bp | ACTCAAGTTCCCTACCAAGCCCCTATCGGAGATTTGTaGATAGAAACAGAAAGTCTACAATATTTCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: TQVPYQAPIGDL*IETESLQYFSS Trigger: GGAGCTGAAATATTGTAGACTTTCTGTTTCTATTCACAAATCTCCGATAGGGGCTTGGTAGGGAACTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | AGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGGGTGGGAGCCCTCGGCCAGTaGCCAGCAGGGCGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: STHLPSPSPVLSGVPHGVGALGQ*PAGRPA Trigger: TGCTGGCCGCCCTGCTGGCCACTGGCCGAGGGCTCC...CACCCCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAGGCAGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATGGCCAAACGGGCCCCTGCCCCTTTaGCACGGGTCAGCAACCGGC | + |
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Preference number: 4 (lower is better) Translates to: GKGRRAPFLERGKDPWPNGPLPL*HGSATG Trigger: GCCGGTTGCTGACCCGTGGCAAAGGGGCAGGGGCCC...GTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCTGCCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | TGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTCTGCTGCAGGGAGACCAGGTaGTCCACTCCTCCTGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WDRVEAVCHKEGWSPWFCCRETR*STPPGV Trigger: AACCCCAGGAGGAGTGGAGCACCTGGTCTCCCTGCA...GCAGAACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGCAACGTGTTCTCCTCTaGGGTGCCAGGACAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHPSPKSKSSAFRGATRQRVLL*GARTGG Trigger: GCCCCCTGTCCTGGCACCGCAGAGGAGAACACGTTG...CCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGGGTGTGCCTCCAGAGGGTATaGACACGGGCAACTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STHLPSPSPVLSGVPHGVCLQRV*TRATGQ Trigger: CTGCCCAGTTGCCCGTGTGCATACCCTCTGGAGGCA...CACCCCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTGTGTTCTTCCACAACTGGCCCTAGGGTAGATGGGTGGGTGGGGTGGGCACCCGGGCTGACATaGTTCTGTCTGCAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLCSSTTGPRVDGWVGWAPGLT*FCLQMV Trigger: GACCATCTGCAGACAGAACCATGTCAGCCCGGGTGC...CCACCCCACCCACCCATCTACCCTAGGGCCAGTTGTGGAAGAACACAGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | TCACAACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTGGCTCAATCCCGTGGGGAGCTGAGATCTaGGGCAGGGGAGGCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQQILGTGMCLDHLGSIPWGAEI*GRGGLR Trigger: GCGGAGGCCTCCCCTGCCCCAGATCTCAGCTCCCCA...CGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR TCA 90 bp | CACATGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTGTCTGGCACCCGGGCTaGCATGGTTCTGTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HMGQGRSCVPQGGVVTLVVWHPG*HGSVCR Trigger: TCTGCAGACAGAACCATGTCAGCCCGGGTGCCAGAC...AACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGCAGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATGGCCAAACCTGGAGCCCTGTCTCTaGGGCTGGTGGCTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGRRAPFLERGKDPWPNLEPCL*GWWLLL Trigger: AAGAAGGAGCCACCAGCCTCAGAGACAGGGCTCCAG...GTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCTGCCTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGAACCAGCTAGGGGCATaGAGGGGCCAGAGATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKHPSPKSKSSAFRGATRNQLGA*RGQRLL Trigger: CAGCAATCTCTGGCCCCTGCATGCCCCTAGCTGGTT...CCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGCAGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATGGCCAAACTCCTCCTTCCACCTCTaGTTCCCCTGGAGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKGRRAPFLERGKDPWPNSSFHL*FPWSPV Trigger: GACAGGGCTCCAGGGGAAGCAGAGGTGGAAGGAGGA...GTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCTGCCTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCTGGGAGCCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGTTGTGGGCAAGGGGCTaGCACCCCTCACTGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPKHPSPKSKSSAFRLWARG*HPSLGK Trigger: CTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAA...CCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGGCTCCCAGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCTGGGAACTGGGATGTGTCTGGACCACCTTGGCTCAATCCCGAACAGAGACCCAGAGTCAGAGCTaGTGGCTCAGGGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGCVWTTLAQSRTETQSQS*WLRDGL Trigger: CAGACCATCCCTGAGCCAGCAGCTCTGACTCTGGGT...CTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | TACCAACACCATAAATGGCCCACATCCAATATCGGGACCCTCTGCCCTGTCACAGCAGGGGCCAGAGATTaGTGGGCTCAGAAGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQHHKWPTSNIGTLCPVTAGARD*WAQKAG Trigger: ACCTGCCTTCTGAGCCCAGCAATCTCTGGCCCCTGC...TGTGACAGGGCAGAGGGTCCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGAGGGTCAGCAACCGGCTaGCTTCATCATAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGSKGFTTDPGNWDVSGGSATG*LHHSSS Trigger: ACTGCTGCTATGATGAAGGCAGCCGGTTGCTGACCC...TCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACCCCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGCAGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATGGCCAAACTGTGTTCTTCTCCTTTaGGGAGCTGAGATCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGRRAPFLERGKDPWPNCVLLL*GAEIWG Trigger: GCCCCAGATCTCAGCTCCCCAAAGGAGAAGAACACA...GTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCTGCCTTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | GGGTCAGATGAAAGGACTGTCCTATCTTGCCCCACCCCTCCCTGTGTTCTTCCAGTACTCTTCCTCTGGTaGGTTGTCTGTGCAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSDERTVLSCPTPPCVLPVLFLW*VVCASP Trigger: CGGGCTTGCACAGACAACCCACCAGAGGAAGAGTAC...TGGAAGAACACAGGGAGGGGTGGGGCAAGATAGGACAGTCCTTTCATCTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| 3UTR CAA 72 bp | AACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTaGGCTCAATCCCGAACAGAGGGAAAGGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRSWELGCVWTT*AQSRTEGKAEG Trigger: CCCTTCTGCCTTTCCCTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR TCA 90 bp | AGATCCTGGGAACTGGGATGTGTCTGGACCACCTTGGCTCAATCCCGAACAGAGTTGGCCTCCTGCAATTaGGCCAGGTACTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGCVWTTLAQSRTELASCN*ARYSSS Trigger: AGAGGAAGAGTACCTGGCTCAATTGCAGGAGGCCAA...CTCTGTTCGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGGGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGAGGTTCTGTCTGCAGATaGTCTCCAGGGAATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGSKGFTTDPGNWDVSGGSVCR*SPGNPG Trigger: ACCAGGATTCCCTGGAGACCATCTGCAGACAGAACC...TCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACCCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR TCA 90 bp | TACCAACACCATAAATGGCCCACATCCAATATCGGGACCCTCTGCCCTGTCACAAACTGGGCAGGTCCTTaGGCACTTGGCTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YQHHKWPTSNIGTLCPVTNWAGP*ALGSGS Trigger: ACTACCTGAGCCAAGTGCTCAAGGACCTGCCCAGTT...TGTGACAGGGCAGAGGGTCCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTTGTGTTCCAGGGTCCTaGGAGATGTGGCTGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRDSQQILGTGMCLDHLCVPGS*EMWLYP Trigger: TGGGTACAGCCACATCTCCCAGGACCCTGGAACACA...AAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | TACCAACACCATAAATGGCCCACATCCAATATCGGGACCCTCTGCCCTGTCACATCTTCAGTTCCCCTTTaGTCCTCACCCTCGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: YQHHKWPTSNIGTLCPVTSSVPL*SSPSPY Trigger: GTATGGCGAGGGTGAGGACCAAAGGGGAACTGAAGA...TGTGACAGGGCAGAGGGTCCCGATATTGGATGTGGGCCATTTATGGTGTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR TCA 90 bp | CAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATGAGAGGTGTTGGAAGCTGCGACCCTaGTGTTCGTCCTGCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYFSSRETKKVWFGDERCWKLRP*CSSCRL Trigger: GAGCCTGCAGGACGAACATCAGGGTCGCAGCTTCCA...ACACCTCTCATCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTACAGCTGTCCACATCTaGATCAAGCATATCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRDSQQILGTGMCLDHLTAVHI*IKHIRC Trigger: GCAACGGATATGCTTGATCCAGATGTGGACAGCTGT...AAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | CAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATGAGAGGTGTAACCCTGGTAGCTTCTaGAGCTCCAGCAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYFSSRETKKVWFGDERCNPGSF*SSSSRG Trigger: CCCTCTGCTGCTGGAGCTGCAGAAGCTACCAGGGTT...ACACCTCTCATCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | CAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATGAGAGGTGTGGGTCCTGGGAGATGTaGCTGTACCCAGAGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QYFSSRETKKVWFGDERCGSWEM*LYPESE Trigger: CTCTGACTCTGGGTACAGCCACATCTCCCAGGACCC...ACACCTCTCATCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR TCA 90 bp | CAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATCTCTACCTCAGTCTaGGGGTCCTGCACCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QKVYNISAPEKPRKYGLGISTSV*GSCTTS Trigger: CGAGGTGGTGCAGGACCCTCAGACTGAGGTAGAGAT...CCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | CCCTATCGGAGATTTGTGAATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGGGGGCCAGAGATTGCTaGGCTCAGAAGGCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYRRFVNRNRKSTIFQLQGARDC*AQKAGP Trigger: TGGACCTGCCTTCTGAGCCCAGCAATCTCTGGCCCC...CTGGAGCTGAAATATTGTAGACTTTCTGTTTCTATTCACAAATCTCCGATAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGAGCTGCCACCCCTCACTaGGAAAGCCCAACGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSTIFQLQRNQESMVWGAATPH*ESPTCS Trigger: AGAACACGTTGGGCTTTCCCAGTGAGGGGTGGCAGC...TCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGACGCTCAAGTCTGTGTTaGCCAACCCTGGTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSTIFQLQRNQESMVWGRSSLC*PTLVAS Trigger: AGAAGCTACCAGGGTTGGCCAACACAGACTTGAGCG...TCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGAGTCTCCAGGGAATCCTaGTGTTGTGTTCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKSTIFQLQRNQESMVWGVSRES*CCVLLL Trigger: AAGGAGAAGAACACAACACCAGGATTCCCTGGAGAC...TCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR GCA 90 bp | ATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGCTAGGAAGTCACTCTTaGAGTTCAGCCACTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IETESLQYFSSRETKKVWLGSHS*SSATSH Trigger: GTGAGAAGTGGCTGAACTGCAAGAGTGACTTCCTAG...CCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTGTTTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR TCA 90 bp | ATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGCTATCTACCTTGAAGTaGAGCTCAGGTGAAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IETESLQYFSSRETKKVWLSTLK*SSGEKS Trigger: TGACTTTTCACCTGAGCTTCACTTCAAGGTAGATAG...CCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTGTTTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS GCA 90 bp | CAGTGCAGGCATAGCCGCAGGGTCGCGTTCTCTGCTGGTATCCGCTaGCGCAGCTCCCGTTGCAGGGAGACCAGGTGCTCCACTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QCRHSRRVAFSAGIR*RSSRCRETRCSTPP Trigger: AGGAGGAGTGGAGCACCTGGTCTCCCTGCAACGGGAGCTGCGGCAGCGGATACCAGCAGAGAACGCGACCCTGCGGCTATGCCTGCACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS GCA 90 bp | CGCAGGGTCGCGTTCTCTGCTGGTATCCGCTGCCGCAGCTCCCGTTaGAGGGAGACCAGGTGCTCCACTCCTCCTGGGGTTCACAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRVAFSAGIRCRSSR*RETRCSTPPGVHSH Trigger: ATGACTGTGAACCCCAGGAGGAGTGGAGCACCTGGTCTCCCTGCAACGGGAGCTGCGGCAGCGGATACCAGCAGAGAACGCGACCCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS GCA 90 bp | GCGACCCTGATGTTCGTCCTGCAGGCTCACGGCGGCGCTGTACACTaGCTCCAGAGGGTATGCACACGGGCAACTGGGCAGGTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ATLMFVLQAHGGAVH*LQRVCTRATGQVLE Trigger: CTCAAGGACCTGCCCAGTTGCCCGTGTGCATACCCTCTGGAGGCAGTGTACAGCGCCGCCGTGAGCCTGCAGGACGAACATCAGGGTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS GCA 90 bp | GTCCTGCAGGCTCACGGCGGCGCTGTACACTGCCTCCAGAGGGTATaGACACGGGCAACTGGGCAGGTCCTTGAGCACTTGGCTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLQAHGGAVHCLQRV*TRATGQVLEHLAQV Trigger: TACCTGAGCCAAGTGCTCAAGGACCTGCCCAGTTGCCCGTGTGCATACCCTCTGGAGGCAGTGTACAGCGCCGCCGTGAGCCTGCAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 90 bp | CAGGCAGTAGCGCGCAGTAGGCTGGTAGATGTCCAAGCGCTCTTGTaGGCTACTCGCATCCCGCCACTGGAAGCTGCGACCCTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAVARSRLVDVQALL*ATRIPPLEAATLMF Trigger: GAACATCAGGGTCGCAGCTTCCAGTGGCGGGATGCGAGTAGCCCACAAGAGCGCTTGGACATCTACCAGCCTACTGCGCGCTACTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGGTCTAAGGGATTCACAACAGATCCTGGGAACTGGGATGTGTCTGGACTGCCGCAGCTCCCGTaGCAGGGAGACCAGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWGSKGFTTDPGNWDVSGLPQLP*QGDQVL Trigger: GAGCACCTGGTCTCCCTGCAACGGGAGCTGCGGCAG...TCCAGACACATCCCAGTTCCCAGGATCTGTTGTGAATCCCTTAGACCCCCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS TCA 90 bp | CCCAGAGTCAGAGCTGCTGGCTCAGGGATGGTCTGGCACCCGGGCTaGCATGGTTCTGTCTGCAGATGGTCTCCAGGGAATCCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRVRAAGSGMVWHPG*HGSVCRWSPGNPGV Trigger: AACACCAGGATTCCCTGGAGACCATCTGCAGACAGAACCATGTCAGCCCGGGTGCCAGACCATCCCTGAGCCAGCAGCTCTGACTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS CCA 90 bp | CTGCAGATGGTCTCCAGGGAATCCTGGTGTTGTGTTCTTCTCCTTTaGGGAGCTGAGATCTGGGGCAGGGGAGGCCTCCGCCATCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LQMVSRESWCCVLLL*GAEIWGRGGLRHPR Trigger: TCGAGGATGGCGGAGGCCTCCCCTGCCCCAGATCTCAGCTCCCCAAAGGAGAAGAACACAACACCAGGATTCCCTGGAGACCATCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS CCA 90 bp | CCCGGGCTGACATGGTTCTGTCTGCAGATGGTCTCCAGGGAATCCTaGTGTTGTGTTCTTCTCCTTTGGGGAGCTGAGATCTGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLTWFCLQMVSRES*CCVLLLWGAEIWGR Trigger: CCTGCCCCAGATCTCAGCTCCCCAAAGGAGAAGAACACAACACCAGGATTCCCTGGAGACCATCTGCAGACAGAACCATGTCAGCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS CCA 90 bp | AGTCTTGTTCCTGAGGACCCAACCAGCCATAGTCCCAGTTGTCTATaGCCCCGCTGGACCAAGGCTCCTCAGCCTCGCCTTCTTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLVPEDPTSHSPSCL*PRWTKAPQPRLLQF Trigger: GAACTGAAGAAGGCGAGGCTGAGGAGCCTTGGTCCAGCGGGGCCATAGACAACTGGGACTATGGCTGGTTGGGTCCTCAGGAACAAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS GCA 90 bp | CAGCCACTTCTCACAGCTGTCCACATCTGGATCAAGCATATCCGTTaGATTGTGGGCAAGGGGCTGCCACCCCTCACTGGGAAAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QPLLTAVHIWIKHIR*IVGKGLPPLTGKAQ Trigger: TTGGGCTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAGAAGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAGCACCCATCTCCCAAGTCCAAGTCCAGTGCTTTCAGGGGTGCCACACGGTTCTTCAGTTCCCCTTaGGTCCTCACCCTCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PKHPSPKSKSSAFRGATRFFSSP*VLTLAI Trigger: TATGGCGAGGGTGAGGACCAAAGGGGAACTGAAGAA...CCGTGTGGCACCCCTGAAAGCACTGGACTTGGACTTGGGAGATGGGTGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS-3UTR CAA 90 bp | CACATGGGACAGGGTAGAAGCTGTGTGCCACAAGGAGGGGTGGTCACCCTGGTTGATCAAGCATATCCGTaGCATTGTGGGCAAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HMGQGRSCVPQGGVVTLVDQAYP*HCGQGA Trigger: AGCCCCTTGCCCACAATGCAACGGATATGCTTGATC...AACCAGGGTGACCACCCCTCCTTGTGGCACACAGCTTCTACCCTGTCCCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
||
| CDS CCA 90 bp | TTCTCACAGCTGTCCACATCTGGATCAAGCATATCCGTTGCATTGTaGGCAAGGGGCTGCCACCCCTCACTGGGAAAGCCCAACGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSQLSTSGSSISVAL*ARGCHPSLGKPNVF Trigger: GAACACGTTGGGCTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAGGCAGAAGGGCCCCATTCCTAGAGAGAGGGAAAGACCCATGGCCAAACCAGGGAATCCTGGTGTaGTGTTCTTCTCCTTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GKGRRAPFLERGKDPWPNQGILV*CSSPLG Trigger: CCCCAAAGGAGAAGAACACAACACCAGGATTCCCTG...GTTTGGCCATGGGTCTTTCCCTCTCTCTAGGAATGGGGCCCTTCTGCCTTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CAA 90 bp | TCACAACAGATCCTGGGAACTGGGATGTGTCTGGACCACCTTGGCTCAATCCCGATGGTCACCTGGATGTaGGGGTTTGGTGCGCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: SQQILGTGMCLDHLGSIPMVTWM*GFGALK Trigger: CTTGAGCGCACCAAACCCCAACATCCAGGTGACCAT...CGGGATTGAGCCAAGGTGGTCCAGACACATCCCAGTTCCCAGGATCTGTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS CCA 90 bp | AGACCAGGTGCTCCACTCCTCCTGGGGTTCACAGTCATAGCTGTCTaGTTGTTGGAAGTCTTGTTCCTGAGGACCCAACCAGCCATAGTC | + |
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Preference number: 5 (lower is better) Translates to: RPGAPLLLGFTVIAV*LLEVLFLRTQPAIV Trigger: GACTATGGCTGGTTGGGTCCTCAGGAACAAGACTTCCAACAACCAGACAGCTATGACTGTGAACCCCAGGAGGAGTGGAGCACCTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 90 bp | GAAGTCACTCTTGCAGTTCAGCCACTTCTCACAGCTGTCCACATCTaGATCAAGCATATCCGTTGCATTGTGGGCAAGGGGCTGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: EVTLAVQPLLTAVHI*IKHIRCIVGKGLPP Trigger: GGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAGAAGTGGCTGAACTGCAAGAGTGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS-3UTR CAA 90 bp | CAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGTTTGGGGATGAGAGGTGTTTTGGCCTCCTGCAATaGAGCCAGGTACTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QYFSSRETKKVWFGDERCFGLLQ*SQVLFL Trigger: GAGGAAGAGTACCTGGCTCAATTGCAGGAGGCCAAA...ACACCTCTCATCCCCAAACCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CAA 90 bp | CCCTATCGGAGATTTGTGAATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGGCTAGGAAGTCACTCTaGCAGTTCAGCCACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PYRRFVNRNRKSTIFQLQARKSL*QFSHFS Trigger: TGAGAAGTGGCTGAACTGCAAGAGTGACTTCCTAGC...CTGGAGCTGAAATATTGTAGACTTTCTGTTTCTATTCACAAATCTCCGATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAACAGAAAGTCTACAATATTTCAGCTCCAGAGAAACCAAGAAAGTATGGATAGCTGTCTGGTTGTaGGAAGTCTTGTTCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IETESLQYFSSRETKKVWIAVWL*EVLFLR Trigger: CCTCAGGAACAAGACTTCCAACAACCAGACAGCTAT...CCATACTTTCTTGGTTTCTCTGGAGCTGAAATATTGTAGACTTTCTGTTTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS CCA 72 bp | CGAGTGGCCGTGGGGCCCGGGACCTCGCTTCCTCAGTaGGAGCCCTCGGCCAGTGGCCAGCAGGGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RVAVGPGTSLPQ*EPSASGQQGGQ Trigger: CTGGCCGCCCTGCTGGCCACTGGCCGAGGGCTCCCACTGAGGAAGCGAGGTCCCGGGCCCCACGGCCACTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS CCA 72 bp | CGGGACCTCGCTTCCTCAGTGGGAGCCCTCGGCCAGTaGCCAGCAGGGCGGCCAGCAGCATCAAGGCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RDLASSVGALGQ*PAGRPAASRRA Trigger: CGCGCGCCTTGATGCTGCTGGCCGCCCTGCTGGCCACTGGCCGAGGGCTCCCACTGAGGAAGCGAGGTCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS GCA 72 bp | CATAGCCGCAGGGTCGCGTTCTCTGCTGGTATCCGCTaGCGCAGCTCCCGTTGCAGGGAGACCAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSRRVAFSAGIR*RSSRCRETRCS Trigger: GGAGCACCTGGTCTCCCTGCAACGGGAGCTGCGGCAGCGGATACCAGCAGAGAACGCGACCCTGCGGCTATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS GCA 72 bp | GGGCCCCTGCCCCTTTGCCACGGGTCAGCAACCGGCTaGCTTCATCATAGCAGCAGTGCTGGGCAGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPLPLCHGSATG*LHHSSSAGQPR Trigger: CCTTGGCTGCCCAGCACTGCTGCTATGATGAAGGCAGCCGGTTGCTGACCCGTGGCAAAGGGGCAGGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS GCA 72 bp | GCGTTCTCTGCTGGTATCCGCTGCCGCAGCTCCCGTTaGAGGGAGACCAGGTGCTCCACTCCTCCTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: AFSAGIRCRSSR*RETRCSTPPGV Trigger: AACCCCAGGAGGAGTGGAGCACCTGGTCTCCCTGCAACGGGAGCTGCGGCAGCGGATACCAGCAGAGAACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS GCA 72 bp | ATGTTCGTCCTGCAGGCTCACGGCGGCGCTGTACACTaGCTCCAGAGGGTATGCACACGGGCAACTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: MFVLQAHGGAVH*LQRVCTRATGQ Trigger: CTGCCCAGTTGCCCGTGTGCATACCCTCTGGAGGCAGTGTACAGCGCCGCCGTGAGCCTGCAGGACGAACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | GCGCGCAGTAGGCTGGTAGATGTCCAAGCGCTCTTGTaGGCTACTCGCATCCCGCCACTGGAAGCTGCGACC | + |
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Preference number: 6 (lower is better) Translates to: ARSRLVDVQALL*ATRIPPLEAAT Trigger: GGTCGCAGCTTCCAGTGGCGGGATGCGAGTAGCCCACAAGAGCGCTTGGACATCTACCAGCCTACTGCGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 90 bp | ACGCAGGCAGTAGCGCGCAGTAGGCTGGTAGATGTCCAAGCGCTCTaGTGGGCTACTCGCATCCCGCCACTGGAAGCTGCGACCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: TQAVARSRLVDVQAL*WATRIPPLEAATLM Trigger: CATCAGGGTCGCAGCTTCCAGTGGCGGGATGCGAGTAGCCCACAAGAGCGCTTGGACATCTACCAGCCTACTGCGCGCTACTGCCTGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | TGGTGTTGTGTTCTTCTCCTTTGGGGAGCTGAGATCTaGGGCAGGGGAGGCCTCCGCCATCCTCGAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WCCVLLLWGAEI*GRGGLRHPRVA Trigger: GGCCACTCGAGGATGGCGGAGGCCTCCCCTGCCCCAGATCTCAGCTCCCCAAAGGAGAAGAACACAACACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS CAA 72 bp | GTAGCGCGCAGTAGGCTGGTAGATGTCCAAGCGCTCTaGTGGGCTACTCGCATCCCGCCACTGGAAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VARSRLVDVQAL*WATRIPPLEAA Trigger: CGCAGCTTCCAGTGGCGGGATGCGAGTAGCCCACAAGAGCGCTTGGACATCTACCAGCCTACTGCGCGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | GTCTCCAGGGAATCCTGGTGTTGTGTTCTTCTCCTTTaGGGAGCTGAGATCTGGGGCAGGGGAGGCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: VSRESWCCVLLL*GAEIWGRGGLR Trigger: GCGGAGGCCTCCCCTGCCCCAGATCTCAGCTCCCCAAAGGAGAAGAACACAACACCAGGATTCCCTGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125733.8 |
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| CDS CAA 90 bp | CCCGCTGGACCAAGGCTCCTCAGCCTCGCCTTCTTCAGTTCCCCTTaGGTCCTCACCCTCGCCATACTCCACAGCATAGTCCTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PAGPRLLSLAFFSSP*VLTLAILHSIVLSS Trigger: GGAGGAAAGGACTATGCTGTGGAGTATGGCGAGGGTGAGGACCAAAGGGGAACTGAAGAAGGCGAGGCTGAGGAGCCTTGGTCCAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS TCA 72 bp | AGAGCTGCTGGCTCAGGGATGGTCTGGCACCCGGGCTaGCATGGTTCTGTCTGCAGATGGTCTCCAGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RAAGSGMVWHPG*HGSVCRWSPGN Trigger: ATTCCCTGGAGACCATCTGCAGACAGAACCATGTCAGCCCGGGTGCCAGACCATCCCTGAGCCAGCAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS GCA 72 bp | GGATCAAGCATATCCGTTGCATTGTGGGCAAGGGGCTaGCACCCCTCACTGGGAAAGCCCAACGTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSSISVALWARG*HPSLGKPNVFS Trigger: GGAGAACACGTTGGGCTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS GCA 72 bp | CTCACAGCTGTCCACATCTGGATCAAGCATATCCGTTaGATTGTGGGCAAGGGGCTGCCACCCCTCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTAVHIWIKHIR*IVGKGLPPLTG Trigger: CCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | CTGTCCACATCTGGATCAAGCATATCCGTTGCATTGTaGGCAAGGGGCTGCCACCCCTCACTGGGAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSTSGSSISVAL*ARGCHPSLGKP Trigger: GGGCTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | CCTGCACCACCTCGATGGTCACCTGGATGTTGGGGTTaGGTGCGCTCAAGTCTGTGTTGGCCAACCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PAPPRWSPGCWG*VRSSLCWPTLV Trigger: TACCAGGGTTGGCCAACACAGACTTGAGCGCACCAAACCCCAACATCCAGGTGACCATCGAGGTGGTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | CCAAGGCTCCTCAGCCTCGCCTTCTTCAGTTCCCCTTaGGTCCTCACCCTCGCCATACTCCACAGCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: PRLLSLAFFSSP*VLTLAILHSIV Trigger: GACTATGCTGTGGAGTATGGCGAGGGTGAGGACCAAAGGGGAACTGAAGAAGGCGAGGCTGAGGAGCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 90 bp | CACTTCTCACAGCTGTCCACATCTGGATCAAGCATATCCGTTGCATaGTGGGCAAGGGGCTGCCACCCCTCACTGGGAAAGCCCAACGTG | + |
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Preference number: 6 (lower is better) Translates to: HFSQLSTSGSSISVA*WARGCHPSLGKPNV Trigger: CACGTTGGGCTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | TCTCTACCTCAGTCTGAGGGTCCTGCACCACCTCGATaGTCACCTGGATGTTGGGGTTTGGTGCGCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLPQSEGPAPPR*SPGCWGLVRSS Trigger: ACTTGAGCGCACCAAACCCCAACATCCAGGTGACCATCGAGGTGGTGCAGGACCCTCAGACTGAGGTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | TTTGGCCTCCTGCAATTGAGCCAGGTACTCTTCCTCTaGTGGGTTGTCTGTGCAAGCCCGGCCATTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: FGLLQLSQVLFL*WVVCASPAIVG Trigger: CCCAACAATGGCCGGGCTTGCACAGACAACCCACCAGAGGAAGAGTACCTGGCTCAATTGCAGGAGGCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | CAGCTGTCCACATCTGGATCAAGCATATCCGTTGCATaGTGGGCAAGGGGCTGCCACCCCTCACTGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QLSTSGSSISVA*WARGCHPSLGK Trigger: CTTTCCCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | TCTCACAGCTGTCCACATCTGGATCAAGCATATCCGTaGCATTGTGGGCAAGGGGCTGCCACCCCTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SHSCPHLDQAYP*HCGQGAATPHW Trigger: CCAGTGAGGGGTGGCAGCCCCTTGCCCACAATGCAACGGATATGCTTGATCCAGATGTGGACAGCTGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | CTCCTCCTGGGGTTCACAGTCATAGCTGTCTGGTTGTaGGAAGTCTTGTTCCTGAGGACCCAACCAGCCATA | + |
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Preference number: 6 (lower is better) Translates to: LLLGFTVIAVWL*EVLFLRTQPAI Trigger: TATGGCTGGTTGGGTCCTCAGGAACAAGACTTCCAACAACCAGACAGCTATGACTGTGAACCCCAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CCA 72 bp | ACATGGTTCTGTCTGCAGATGGTCTCCAGGGAATCCTaGTGTTGTGTTCTTCTCCTTTGGGGAGCTGAGATC | + |
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Preference number: 6 (lower is better) Translates to: TWFCLQMVSRES*CCVLLLWGAEI Trigger: GATCTCAGCTCCCCAAAGGAGAAGAACACAACACCAGGATTCCCTGGAGACCATCTGCAGACAGAACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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| CDS CAA 72 bp | GGGTTCACAGTCATAGCTGTCTGGTTGTTGGAAGTCTaGTTCCTGAGGACCCAACCAGCCATAGTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GFTVIAVWLLEV*FLRTQPAIVPV Trigger: AACTGGGACTATGGCTGGTTGGGTCCTCAGGAACAAGACTTCCAACAACCAGACAGCTATGACTGTGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051601.6 ENSMUST00000125733.8 |
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