Pregenerated sensors for ISLR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037206Ensembl transcript IDs: ENSMUST00000041477.15, ENSMUST00000168864.4, ENSMUST00000217578.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGGCCACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTaGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCA | + |
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Preference number: 1 (lower is better) Translates to: TGHSRPPSSPAPVPT*MASTSSLPPWLELS Trigger: TGAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTGGCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR GCA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTaGCCAGCCATGGCCCGTGGTACCTCCTTTCCAGATCCTGTACTG | + |
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Preference number: 1 (lower is better) Translates to: PYLIREHLKTGKLLA*PAMARGTSFPDPVL Trigger: CAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCTGTGGCTAGCCCAGCCCCAGTaGCCACCTGGATGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LFRGGGGVSVSRGRHMLWLAQPQ*PPGWPP Trigger: TGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAG...CCACAGCATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGGGAAAGCTTTTAGCCTaGCCAGCCATGGCCCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ASLFRGGGGVSVSRGRHMGKLLA*PAMARG Trigger: ACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCC...CATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGCCATGGCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCAGGTGATAGGAAAATGTaGAGTCCCCAGGCTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: CPAMARGTSFPDPVLATPGDRKM*SPQANL Trigger: GAGGTTAGCCTGGGGACTTCACATTTTCCTATCACC...TGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGGTGATAGGAAAATGTaGAGTCCCCAGGCTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: PAPVPTWMASTSSLPPWLGDRKM*SPQANL Trigger: GAGGTTAGCCTGGGGACTTCACATTTTCCTATCACC...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCTAGCCCAGCCCCAGTaGCCACCTGGATGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SISHQRASKNRKAFSLPSLAQPQ*PPGWPP Trigger: TGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAG...GCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCTTAAGACATTGTTGTTaGCCTGTTAGCAGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SISHQRASKNRKAFSLPSLRHCC*PVSRLP Trigger: GGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA...GCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR GCA 72 bp | CTGGCCACTCCAGACCCCCTTCTAGCCCAGCCCCAGTaGCCACCTGGATGGCCTCCACAAGCTCTTTACCTC | + |
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Preference number: 3 (lower is better) Translates to: LATPDPLLAQPQ*PPGWPPQALYL Trigger: GAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTGGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR CCA 72 bp | TCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTaGATGGCCTCCACAAGCTCTTTACCTCCATGGCTA | + |
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Preference number: 3 (lower is better) Translates to: SRPPSSPAPVPT*MASTSSLPPWL Trigger: TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR CCA 72 bp | AACAGGAAAGCTTTTAGCCTGCCCAGCCATGGCCCGTaGTACCTCCTTTCCAGATCCTGTACTGGCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: NRKAFSLPSHGP*YLLSRSCTGHS Trigger: GGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| 3UTR GCA 72 bp | ATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTaGCCAGCCATGGCCCGTGGTACCTCCTTTCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: IREHLKTGKLLA*PAMARGTSFPD Trigger: ATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | CACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTCCACAGCAGCTGCAGAGCGCTaGGGTTGTGCAGGTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSRPPSSPAPVPTWMASTAAAER*GCAGRS Trigger: GGAGCGACCTGCACAACCTCAGCGCTCTGCAGCTGC...TGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | ACTGGCCACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCAGCGTGGCTGCCCACTaGTTGCAAGGGCACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TGHSRPPSSPAPVPTWMASVAAH*LQGHQA Trigger: TGCCTGGTGCCCTTGCAACCAGTGGGCAGCCACGCT...GGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTGGCCAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | ACTGGCCACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTGGCAGCCTGTTGGCTaGCAGGCTCAGTGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TGHSRPPSSPAPVPTWMAWQPVG*QAQCGH Trigger: GTGACCACACTGAGCCTGTCAGCCAACAGGCTGCCA...GGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTGGCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | CACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTCCACATGGCAGCCTGTTGGCTaGCAGGCTCAGTGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HSRPPSSPAPVPTWMASTWQPVG*QAQCGH Trigger: GTGACCACACTGAGCCTGTCAGCCAACAGGCTGCCA...TGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | CACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTCCACACCAGGGCCCATGTCTTaGACCACACGATGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: HSRPPSSPAPVPTWMASTPGPMS*TTRCHR Trigger: CCTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGG...TGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTCCACATGCTATTGCAGCTTCTaGGGGCCCAGCACGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HSRPPSSPAPVPTWMASTCYCSF*GPSTAE Trigger: CTCAGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCA...TGTGGAGGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTAAGCGTGGCTGCCCACTaGTTGCAAGGGCACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QGELGRPWSCSSQPGQGVSVAAH*LQGHQA Trigger: TGCCTGGTGCCCTTGCAACCAGTGGGCAGCCACGCT...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCTGTGGAGTGGGACAGCGCGGTaGGCGGTGCGAAGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LFRGGGGVSVSRGRHMLWSGTAR*AVRRCP Trigger: AGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACT...CCACAGCATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CAGGAACGTGATCAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCACCCTCGGCCAACGCGTaGAGGCGGTTGTGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QERDQGELGRPWSCSSQPPSANA*RRLWLS Trigger: GCTCAACCACAACCGCCTGCACGCGTTGGCCGAGGG...TGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTGATCACGTTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | TGCCCAGCCATGGCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCAGCCTGGAAGCGTGGCTaGCCACTGGTTGCAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CPAMARGTSFPDPVLATPAWKRG*PLVARA Trigger: TGCCCTTGCAACCAGTGGGCAGCCACGCTTCCAGGC...TGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAGCCTGGAAGCGTGGCTaGCCACTGGTTGCAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARAWKRG*PLVARA Trigger: TGCCCTTGCAACCAGTGGGCAGCCACGCTTCCAGGC...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTACTGACAGGCTCAGTGTaGTCACATTGGCCGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QGELGRPWSCSSQPGQGVLTGSV*SHWPGS Trigger: GCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAG...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTACCATCCACGTCACAGTaGAGTGCCAGCACGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGELGRPWSCSSQPGQGVPSTSQ*SASTKP Trigger: TGGCTTCGTGCTGGCACTCCACTGTGACGTGGATGG...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCCATGGCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCACCATTGGCAAAGGCCTaGAAGCGTGGCTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: CPAMARGTSFPDPVLATPPLAKA*KRGCPL Trigger: CAGTGGGCAGCCACGCTTCCAGGCCTTTGCCAATGG...TGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCTGGCTGCCCACTGGTTaGAAGGGCACCAGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAHLDGLHKLFTSMARTLWLPTG*KGTRQG Trigger: GCCCTGCCTGGTGCCCTTGCAACCAGTGGGCAGCCA...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTATCCAGACTCTTGAGATaGCTCAGAGGGGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGELGRPWSCSSQPGQGVSRLLR*LRGARA Trigger: TGCTCTGGCCCCTCTGAGCCATCTCAAGAGTCTGGA...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | TTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCAGCAGCTGCAGAGCGCTaGGGTTGTGCAGGTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRHCCCPVSRLPLLGAQAAAAER*GCAGRS Trigger: GGAGCGACCTGCACAACCTCAGCGCTCTGCAGCTGC...TGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | GCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGGCCAGCCACAGCGACTaGAATAGGGGCACTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ASLFRGGGGVSVSRGRHMASHSD*NRGTSL Trigger: CAGGGAAGTGCCCCTATTGCAGTCGCTGTGGCTGGC...CATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CAGGAACGTGATCAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAAGAGCGCTGAGGTTGTaGAGGTCGCTCCAGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QERDQGELGRPWSCSSQPRALRL*RSLQAN Trigger: GTTTGCCTGGAGCGACCTGCACAACCTCAGCGCTCT...TGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTGATCACGTTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAAGAGCGCTGAGGTTGTaGAGGTCGCTCCAGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARRALRL*RSLQAN Trigger: GTTTGCCTGGAGCGACCTGCACAACCTCAGCGCTCT...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGCCCTCGGCCAACGCGTaGAGGCGGTTGTGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQPSANA*RRLWLS Trigger: GCTCAACCACAACCGCCTGCACGCGTTGGCCGAGGG...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGCCCTTGCCCTCCACTaGTTTGCCATGGAACTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PAPVPTWMASTSSLPPWLALALH*FAMELV Trigger: CACAAGTTCCATGGCAAAGCAGTGGAGGGCAAGGGC...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | GCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGATGCCAGAGAACTGCTaGGCAGGCCTCCCGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ASLFRGGGGVSVSRGRHMMPENC*AGLPSA Trigger: AGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCAT...CATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGACTGACAGGCTCAGTGTaGTCACATTGGCCGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARLTGSV*SHWPGS Trigger: GCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAG...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGACCATCCACGTCACAGTaGAGTGCCAGCACGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARPSTSQ*SASTKP Trigger: TGGCTTCGTGCTGGCACTCCACTGTGACGTGGATGG...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTACACTGCCTAGCTCATTaGTGGCCAGGCAGCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: PAPVPTWMASTSSLPPWLHCLAH*WPGSYR Trigger: CCTATAGCTGCCTGGCCACCAATGAGCTAGGCAGTG...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTGCTATTGCAGCTTCTaGGGGCCCAGCACGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PVPTWMASTSSLPPWLELCYCSF*GPSTAE Trigger: CTCAGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCA...GAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCCCAGGGCCCATGTCTTaGACCACACGATGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SAHLDGLHKLFTSMARTLPGPMS*TTRCHR Trigger: CCTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGG...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGATCCATCTTGAGCAGCTaGAGAGCGCTGAGGTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARSILSS*RALRLC Trigger: GCACAACCTCAGCGCTCTGCAGCTGCTCAAGATGGA...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGACCGTATAGCAGCCCTTaGCCTCCACTGCTTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SPSAHLDGLHKLFTSMARPYSSP*PPLLCH Trigger: ATGGCAAAGCAGTGGAGGGCAAGGGCTGCTATACGG...TCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CAGGAACGTGATCAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCACCGTATAGCAGCCCTTaGCCTCCACTGCTTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QERDQGELGRPWSCSSQPPYSSP*PPLLCH Trigger: ATGGCAAAGCAGTGGAGGGCAAGGGCTGCTATACGG...TGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTGATCACGTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCTCAGTGTGGTCACATTaGCCGGGAAGCCCGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SAHLDGLHKLFTSMARTLSVWSH*PGSPVA Trigger: TGCCACCGGGCTTCCCGGCCAATGTGACCACACTGA...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCGTGCAGGCGGTTGTaGTTGAGCTGCAGGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQACRRL*LSCRER Trigger: GCGTTCCCTGCAGCTCAACCACAACCGCCTGCACGC...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CTGGCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACTGCCTAGCTCATTGGTaGCCAGGCAGCTATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LASLFRGGGGVSVSRGRHCLAHW*PGSYRC Trigger: GCACCTATAGCTGCCTGGCCACCAATGAGCTAGGCA...GTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCCATGGCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCATCCACTGCTTTGCCATaGAACTTGTGCCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPAMARGTSFPDPVLATPSTALP*NLCPTA Trigger: TGCTGTGGGGCACAAGTTCCATGGCAAAGCAGTGGA...TGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGCCATGGCTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCAATGCTGTTAGCAGCAACTGGGTTGTCATTGATCTaGAAGTGGGACAGCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRLPLLGAQAMLLAATGLSLI*KWDSAV Trigger: CACCGCGCTGTCCCACTTGCAGATCAATGACAACCC...AGTTGCTGCTAACAGCATTGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCTGTGGGGGTTGTCATTGATCTaGAAGTGGGACAGCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRGGGGVSVSRGRHMLWGLSLI*KWDSAV Trigger: CACCGCGCTGTCCCACTTGCAGATCAATGACAACCC...CCACAGCATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | GCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCAGAGCTTTCGGCACTaGCTAGCTCATTGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLFRGGGGVSVSRGRHMQSFRH*LAHWWP Trigger: TGGCCACCAATGAGCTAGGCAGTGCCGAAAGCTCTG...CATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGATGCCAGAGAACTGCTaGGCAGGCCTCCCGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQMPENC*AGLPSA Trigger: AGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCAT...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCATTGATCTGCAAGTaGGACAGCGCGGTGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVPTWMASTSSLPPWLELSLICK*DSAVSG Trigger: ACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGA...GAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | TTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCACCATTGGCAAAGGCCTaGAAGCGTGGCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRHCCCPVSRLPLLGAQAPLAKA*KRGCPL Trigger: CAGTGGGCAGCCACGCTTCCAGGCCTTTGCCAATGG...TGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCCACTGCCTAGCTCATTaGTGGCCAGGCAGCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVPTWMASTSSLPPWLELHCLAH*WPGSYR Trigger: CCTATAGCTGCCTGGCCACCAATGAGCTAGGCAGTG...GAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCTGTGGGTCTTCCGGTCCGGATaGCTGTACCTCGTTGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFRGGGGVSVSRGRHMLWVFRSG*LYLVVN Trigger: GTTGACAACGAGGTACAGCCATCCGGACCGGAAGAC...CCACAGCATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCTCCATCTTGAGCAGCTaGAGAGCGCTGAGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAHLDGLHKLFTSMARTLSILSS*RALRLC Trigger: GCACAACCTCAGCGCTCTGCAGCTGCTCAAGATGGA...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGCTGTGGTCAGAGAGGAGGTTGTaGCTGAGGTCCAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRGGGGVSVSRGRHMLWSERRL*LRSRLL Trigger: CAAGAGTCTGGACCTCAGCCACAACCTCCTCTCTGA...CCACAGCATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCTCATTGATCTGCAAGTaGGACAGCGCGGTGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAHLDGLHKLFTSMARTLSLICK*DSAVSG Trigger: ACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGA...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCGGATCTCATTGTGTaGCAGCCACAGCGACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQADLIV*QPQRLQ Trigger: TTGCAGTCGCTGTGGCTGGCACACAATGAGATCCGC...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGCAGAGCTTTCGGCACTaGCTAGCTCATTGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQQSFRH*LAHWWP Trigger: TGGCCACCAATGAGCTAGGCAGTGCCGAAAGCTCTG...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | GTCAGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCAGCCCTTGCCCTCCACTaGTTTGCCATGGAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRLRHCCCPVSRLPLLGAALALH*FAMELV Trigger: CACAAGTTCCATGGCAAAGCAGTGGAGGGCAAGGGC...TGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | TTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCACGAAAGGGTTGTCATTaGTCTGCAAGTGGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRHCCCPVSRLPLLGAQARKGCH*SASGTA Trigger: CGCTGTCCCACTTGCAGATCAATGACAACCCTTTCG...TGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | GCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCAGACCCCCTTCTAACGATAGGCACAGTCTaGAATCTGGAAGCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGTSFPDPVLATPDPLLTIGTV*NLEAIL Trigger: AAGTATGGCTTCCAGATTGCAGACTGTGCCTATCGT...TAGAAGGGGGTCTGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGTCAGAGAGGAGGTTGTaGCTGAGGTCCAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLRHCCCPVSRLPLLGAQSERRL*LRSRLL Trigger: CAAGAGTCTGGACCTCAGCCACAACCTCCTCTCTGA...CTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGTGGCTGCCCACTGGTTaGAAGGGCACCAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFTSMARTLKVGQVKTLWLPTG*KGTRQG Trigger: GCCCTGCCTGGTGCCCTTGCAACCAGTGGGCAGCCA...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCTCAGTGTGGTCACATTaGCCGGGAAGCCCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYLIREHLKTGKLLACPASVWSH*PGSPVA Trigger: TGCCACCGGGCTTCCCGGCCAATGTGACCACACTGA...GGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AAAAACAGGAAAGCTTTTAGCCTGCCCAGCCATGGCCCGTGGTACCTCCTTTCCACGATAGGCACAGTCTaGAATCTGGAAGCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRKAFSLPSHGPWYLLSTIGTV*NLEAIL Trigger: AAGTATGGCTTCCAGATTGCAGACTGTGCCTATCGT...GGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGGCCAGCCACAGCGACTaGAATAGGGGCACTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLFTSMARTLKVGQVKTLASHSD*NRGTSL Trigger: CAGGGAAGTGCCCCTATTGCAGTCGCTGTGGCTGGC...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCTTGCCATGGAACTTGTaGCCCACAGCATCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PYLIREHLKTGKLLACPALPWNL*PTASSP Trigger: GGGAGAGGATGCTGTGGGGCACAAGTTCCATGGCAA...GGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | TCCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCTTGCCATGGAACTTGTaGCCCACAGCATCCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SISHQRASKNRKAFSLPSLPWNL*PTASSP Trigger: GGGAGAGGATGCTGTGGGGCACAAGTTCCATGGCAA...GCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCACCTGGGGTGGCCAATaGCACATTTACAGAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PYLIREHLKTGKLLACPATWGGQ*HIYRAF Trigger: GAAAGCTCTGTAAATGTGGCATTGGCCACCCCAGGT...GGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGTGCCTAGCTCATTGGTaGCCAGGCAGCTATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFTSMARTLKVGQVKTLCLAHW*PGSYRC Trigger: GCACCTATAGCTGCCTGGCCACCAATGAGCTAGGCA...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR TCA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGCGAAAGGGTTGTCATTaGTCTGCAAGTGGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLFTSMARTLKVGQVKTLRKGCH*SASGTA Trigger: CGCTGTCCCACTTGCAGATCAATGACAACCCTTTCG...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | TTTCCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGTCTTCCGGTCCGGATaGCTGTACCTCGTTGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPYLIREHLKTGKLLACPVFRSG*LYLVVN Trigger: GTTGACAACGAGGTACAGCCATCCGGACCGGAAGAC...TGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR GCA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGACCTGGGGTGGCCAATaGCACATTTACAGAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLFTSMARTLKVGQVKTLTWGGQ*HIYRAF Trigger: GAAAGCTCTGTAAATGTGGCATTGGCCACCCCAGGT...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CCA 90 bp | TTTCCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCATCCACTGCTTTGCCATaGAACTTGTGCCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYLIREHLKTGKLLACPSTALP*NLCPTA Trigger: TGCTGTGGGGCACAAGTTCCATGGCAAAGCAGTGGA...TGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS TCA 90 bp | CACTTCCCTGAAGGCTCCCTCCGGCAGGCCTGGCAGCCTGTTGGCTaGCAGGCTCAGTGTGGTCACATTGGCCGGGAAGCCCGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HFPEGSLRQAWQPVG*QAQCGHIGREARWH Trigger: GTGCCACCGGGCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAGCCAACAGGCTGCCAGGCCTGCCGGAGGGAGCCTTCAGGGAAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
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| CDS CCA 90 bp | CTCCCTCCGGCAGGCCTGGCAGCCTGTTGGCTGACAGGCTCAGTGTaGTCACATTGGCCGGGAAGCCCGGTGGCACACCCTCTAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPPAGLAACWLTGSV*SHWPGSPVAHPLGH Trigger: GTGACCTAGAGGGTGTGCCACCGGGCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAGCCAACAGGCTGCCAGGCCTGCCGGAGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
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| CDS CCA 90 bp | CACCGTGCCGCCCGGGGTGTGAATGTGCCAATGGAGCTGGGGGACTaGCTGTCCATCCACGTCACAGTGGAGTGCCAGCACGAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRAARGVNVPMELGD*LSIHVTVECQHEAR Trigger: CCTGGCTTCGTGCTGGCACTCCACTGTGACGTGGATGGACAGCCAGTCCCCCAGCTCCATTGGCACATTCACACCCCGGGCGGCACGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | ACTGGCCACTCCAGACCCCCTTCTAGCCCAGCCCCAGTGCCCACCTGGATGGCCTTGCCCTCCACTGCTTaGCCATGGAACTTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGHSRPPSSPAPVPTWMALPSTA*PWNLCP Trigger: GGGGCACAAGTTCCATGGCAAAGCAGTGGAGGGCAA...GGCCATCCAGGTGGGCACTGGGGCTGGGCTAGAAGGGGGTCTGGAGTGGCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS TCA 90 bp | GTGCCTACATTAGGACTGGCGATCTCCACCGTGCCGCCCGGGGTGTaGATGTGCCAATGGAGCTGGGGGACTGGCTGTCCATCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPTLGLAISTVPPGV*MCQWSWGTGCPSTS Trigger: TGACGTGGATGGACAGCCAGTCCCCCAGCTCCATTGGCACATTCACACCCCGGGCGGCACGGTGGAGATCGCCAGTCCTAATGTAGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS GCA 90 bp | GAAAGGGTTGTCATTGATCTGCAAGTGGGACAGCGCGGTGAGCGGTaGGAAGGTGCCCTCGGCCAACGCGTGCAGGCGGTTGTGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERVVIDLQVGQRGER*EGALGQRVQAVVVE Trigger: CTCAACCACAACCGCCTGCACGCGTTGGCCGAGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CCA 90 bp | ACGATGCCACAGGTGCAGTCGAAAGGGTTGTCATTGATCTGCAAGTaGGACAGCGCGGTGAGCGGTGCGAAGGTGCCCTCGGCCAACGCG | + |
|
Preference number: 5 (lower is better) Translates to: TMPQVQSKGLSLICK*DSAVSGAKVPSANA Trigger: CGCGTTGGCCGAGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTACTGAGGTCCAGACTCTaGAGATGGCTCAGAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGELGRPWSCSSQPGQGVLRSRL*RWLRGA Trigger: GGCCCCTCTGAGCCATCTCAAGAGTCTGGACCTCAG...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | CAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAGGGCAGGGTGTAGCCAGGGCCCATGTCTaGAACCACACGATGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QGELGRPWSCSSQPGQGVARAHV*NHTMPQ Trigger: CTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGGC...TACACCCTGCCCTGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTATCCCGTCTGCTGCTATaGCAGCTTCTGGGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPVPTWMASTSSLPPWLSRLLL*QLLGAQ Trigger: CTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGA...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS GCA 90 bp | AACCACACGATGCCACAGGTGCAGTCGAAAGGGTTGTCATTGATCTaGAAGTGGGACAGCGCGGTGAGCGGTGCGAAGGTGCCCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NHTMPQVQSKGLSLI*KWDSAVSGAKVPSA Trigger: GGCCGAGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 90 bp | AAAGTCAGGGATAAGCAGGCTGCCATTGGCAAAGGCCTGGAAGCGTaGCTGCCCACTGGTTGCAAGGGCACCAGGCAGGGCACGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KVRDKQAAIGKGLEA*LPTGCKGTRQGTSI Trigger: GATGGACGTGCCCTGCCTGGTGCCCTTGCAACCAGTGGGCAGCCACGCTTCCAGGCCTTTGCCAATGGCAGCCTGCTTATCCCTGACTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | AAAAACAGGAAAGCTTTTAGCCTGCCCAGCCATGGCCCGTGGTACCTCCTTTCCGTGGCTGCCCACTGGTaGCAAGGGCACCAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNRKAFSLPSHGPWYLLSVAAHW*QGHQAG Trigger: CCCTGCCTGGTGCCCTTGCAACCAGTGGGCAGCCAC...GGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTATTGCCCTCCACTGCTTaGCCATGGAACTTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPVPTWMASTSSLPPWLLPSTA*PWNLCP Trigger: GGGGCACAAGTTCCATGGCAAAGCAGTGGAGGGCAA...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 90 bp | CCTCACCTGGGGTGGCCAATGCCACATTTACAGAGCTTTCGGCACTaGCTAGCTCATTGGTGGCCAGGCAGCTATAGGTGCCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PHLGWPMPHLQSFRH*LAHWWPGSYRCPPP Trigger: TGGAGGAGGGCACCTATAGCTGCCTGGCCACCAATGAGCTAGGCAGTGCCGAAAGCTCTGTAAATGTGGCATTGGCCACCCCAGGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 90 bp | CCGGTCCGGATGGCTGTACCTCGTTGTCAACCGTATAGCAGCCCTTaGCCTCCACTGCTTTGCCATGGAACTTGTGCCCCACAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRMAVPRCQPYSSP*PPLLCHGTCAPQHP Trigger: AGGATGCTGTGGGGCACAAGTTCCATGGCAAAGCAGTGGAGGGCAAGGGCTGCTATACGGTTGACAACGAGGTACAGCCATCCGGACCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 90 bp | CAGGGCAGGGGTGGCAGGCGGCCTAGTGGGATACCCTTCAGGACGTaGGGTGTAGTACAGGCAATGTTGTCCTGTTCTGGAATAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: QGRGGRRPSGIPFRT*GVVQAMLSCSGIDT Trigger: GGTGTCTATTCCAGAACAGGACAACATTGCCTGTACTACACCCCACGTCCTGAAGGGTATCCCACTAGGCCGCCTGCCACCCCTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | TTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCACTCAGTGTGGTCACATaGGCCGGGAAGCCCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHCCCPVSRLPLLGAQALSVVT*AGKPGG Trigger: GCCACCGGGCTTCCCGGCCAATGTGACCACACTGAG...TGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | GCCCGTGGTACCTCCTTTCCAGATCCTGTACTGGCCACTCCAGACCCCCTTCTATCGTTGCTGTCCATCTaGAGCAGCTGCAGAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARGTSFPDPVLATPDPLLSLLSI*SSCRAL Trigger: CAGCGCTCTGCAGCTGCTCAAGATGGACAGCAACGA...TAGAAGGGGGTCTGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 90 bp | AAGTATGCCAGAGAACTGCTGCGCAGGCCTCCCGTCTGCTGCTATTaGAGCTTCTGGGGGCCCAGCACGGCTGAGGTAAATGATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KYARELLRRPPVCCY*SFWGPSTAEVNDNH Trigger: GTGGTTATCATTTACCTCAGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCATACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 90 bp | AGAGAACTGCTGCGCAGGCCTCCCGTCTGCTGCTATTGCAGCTTCTaGGGGCCCAGCACGGCTGAGGTAAATGATAACCACGTTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RELLRRPPVCCYCSF*GPSTAEVNDNHVVF Trigger: GAAGACAACGTGGTTATCATTTACCTCAGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGAGGCCTGCGCAGCAGTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCAAGGCCTGGCAGCCTGTaGGCTGACAGGCTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLRHCCCPVSRLPLLGARPGSL*ADRLSV Trigger: CACACTGAGCCTGTCAGCCAACAGGCTGCCAGGCCT...TGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | AAAAACAGGAAAGCTTTTAGCCTGCCCAGCCATGGCCCGTGGTACCTCCTTTCCAGGCCTGGCAGCCTGTaGGCTGACAGGCTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNRKAFSLPSHGPWYLLSRPGSL*ADRLSV Trigger: CACACTGAGCCTGTCAGCCAACAGGCTGCCAGGCCT...GGAAAGGAGGTACCACGGGCCATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCGTTGCTGTCCATCTaGAGCAGCTGCAGAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPTWMASTSSLPPWLELSLLSI*SSCRAL Trigger: CAGCGCTCTGCAGCTGCTCAAGATGGACAGCAACGA...GAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | AGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGAACTCTCGCCAGGGCCCATGTCTaGAACCACACGATGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SAHLDGLHKLFTSMARTLARAHV*NHTMPQ Trigger: CTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGGC...GAGAGTTCTAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCAGTGCCCACCTGGATGGCCTCCACAAGCTCTTTACCTCCATGGCTAGTGCAGTCGAAAGGGTaGTCATTGATCTGCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPVPTWMASTSSLPPWLVQSKG*SLICKW Trigger: CCACTTGCAGATCAATGACAACCCTTTCGACTGCAC...TAGCCATGGAGGTAAAGAGCTTGTGGAGGCCATCCAGGTGGGCACTGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCAATGCTGTTAGCAGCAACTGCTTTGCCATGGAACTaGTGCCCCACAGCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVSRLPLLGAQAMLLAATALPWN*CPTASS Trigger: AGAGGATGCTGTGGGGCACAAGTTCCATGGCAAAGC...AGTTGCTGCTAACAGCATTGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS TCA 90 bp | GGGTGTAGTACAGGCAATGTTGTCCTGTTCTGGAATAGACACCGCTaGGGCCAGGGCCCATGTCTTGAACCACACGATGCCACAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCSTGNVVLFWNRHR*GQGPCLEPHDATGA Trigger: TGCACCTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGGCCTCAGCGGTGTCTATTCCAGAACAGGACAACATTGCCTGTACTACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 90 bp | GTCTGCAATCTGGAAGCCATACTTCTCCCCACAGTCACAGGGCTCTaGACAAGCTCGCACCAGGTTCAGGAGAACAGCCCAACAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VCNLEAILLPTVTGL*TSSHQVQENSPTKQ Trigger: CTGCTTTGTTGGGCTGTTCTCCTGAACCTGGTGCGAGCTTGTCCAGAGCCCTGTGACTGTGGGGAGAAGTATGGCTTCCAGATTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
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| CDS CCA 90 bp | AGCACGGCTGAGGTAAATGATAACCACGTTGTCTTCCGGTCCGGATaGCTGTACCTCGTTGTCAACCGTATAGCAGCCCTTGCCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: STAEVNDNHVVFRSG*LYLVVNRIAALALH Trigger: GTGGAGGGCAAGGGCTGCTATACGGTTGACAACGAGGTACAGCCATCCGGACCGGAAGACAACGTGGTTATCATTTACCTCAGCCGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CAGGAACGTGATCAGGGGGAGTTAGGAAGGCCCTGGAGCTGCTCTAGCCAACCAATGAAGGCTAACTCGTaGCTGTCCATCTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QERDQGELGRPWSCSSQPMKANS*LSILSS Trigger: GCTGCTCAAGATGGACAGCAACGAGTTAGCCTTCAT...TGGTTGGCTAGAGCAGCTCCAGGGCCTTCCTAACTCCCCCTGATCACGTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | TTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCACAGGCAGTGCCCTCCTCCAGCTaGCCAAAGTCAGGGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHCCCPVSRLPLLGAQAVPSSS*PKSGIS Trigger: GCTTATCCCTGACTTTGGCAAGCTGGAGGAGGGCAC...TGCCTGTGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS-3UTR CAA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCCTCAGTGTGGTCACATaGGCCGGGAAGCCCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PYLIREHLKTGKLLACPALSVVT*AGKPGG Trigger: GCCACCGGGCTTCCCGGCCAATGTGACCACACTGAG...GGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | GCTAGCCTCTTCAGAGGAGGAGGGGGAGTAAGTGTCTCAAGAGGCAGGCACATGATGAAGGCTAACTCGTaGCTGTCCATCTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLFRGGGGVSVSRGRHMMKANS*LSILSS Trigger: GCTGCTCAAGATGGACAGCAACGAGTTAGCCTTCAT...CATGTGCCTGCCTCTTGAGACACTTACTCCCCCTCCTCCTCTGAAGAGGCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | TATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCATGGTGGCTGCCCACTGGTaGCAAGGGCACCAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLIREHLKTGKLLACPAMVAAHW*QGHQAG Trigger: CCCTGCCTGGTGCCCTTGCAACCAGTGGGCAGCCAC...CATGGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | CCATATCTCATCAGAGAGCATCTAAAAACAGGAAAGCTTTTAGCCTGCCCAGCCTCCCGTCTGCTGCTATaGCAGCTTCTGGGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PYLIREHLKTGKLLACPASRLLL*QLLGAQ Trigger: CTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGA...GGCTGGGCAGGCTAAAAGCTTTCCTGTTTTTAGATGCTCTCTGATGAGATATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | GTCAGGTTAAGACATTGTTGTTGCCCTGTTAGCAGGCTGCCCCTGCTAGGAGCAGTGCAGTCGAAAGGGTaGTCATTGATCTGCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRLRHCCCPVSRLPLLGAVQSKG*SLICKW Trigger: CCACTTGCAGATCAATGACAACCCTTTCGACTGCAC...TGCTCCTAGCAGGGGCAGCCTGCTAACAGGGCAACAACAATGTCTTAACCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGGTGCCCTCCTCCAGCTaGCCAAAGTCAGGGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLFTSMARTLKVGQVKTLVPSSS*PKSGIS Trigger: GCTTATCCCTGACTTTGGCAAGCTGGAGGAGGGCAC...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS-3UTR CAA 90 bp | AAGCTCTTTACCTCCATGGCTAGAACTCTCAAAGTAGGTCAGGTTAAGACATTGGCTTTGCCATGGAACTaGTGCCCCACAGCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLFTSMARTLKVGQVKTLALPWN*CPTASS Trigger: AGAGGATGCTGTGGGGCACAAGTTCCATGGCAAAGC...CAATGTCTTAACCTGACCTACTTTGAGAGTTCTAGCCATGGAGGTAAAGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS GCA 72 bp | CCCTCGGCCAACGCGTGCAGGCGGTTGTGGTTGAGCTaGAGGGAACGCAGGGCGCTGAGGCTGCTAAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSANACRRLWLS*RERRALRLLKA Trigger: CGCCTTTAGCAGCCTCAGCGCCCTGCGTTCCCTGCAGCTCAACCACAACCGCCTGCACGCGTTGGCCGAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | GCAGGCCTGGCAGCCTGTTGGCTGACAGGCTCAGTGTaGTCACATTGGCCGGGAAGCCCGGTGGCACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLAACWLTGSV*SHWPGSPVAHP Trigger: AGGGTGTGCCACCGGGCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAGCCAACAGGCTGCCAGGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
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| CDS GCA 72 bp | GTCATTGATCTGCAAGTGGGACAGCGCGGTGAGCGGTaGGAAGGTGCCCTCGGCCAACGCGTGCAGGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VIDLQVGQRGER*EGALGQRVQAV Trigger: AACCGCCTGCACGCGTTGGCCGAGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS TCA 72 bp | TTAGGACTGGCGATCTCCACCGTGCCGCCCGGGGTGTaGATGTGCCAATGGAGCTGGGGGACTGGCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGLAISTVPPGV*MCQWSWGTGCP Trigger: TGGACAGCCAGTCCCCCAGCTCCATTGGCACATTCACACCCCGGGCGGCACGGTGGAGATCGCCAGTCCTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 72 bp | TATGCCAGAGAACTGCTGCGCAGGCCTCCCGTCTGCTaGTATTGCAGCTTCTGGGGGCCCAGCACGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: YARELLRRPPVC*YCSFWGPSTAE Trigger: CTCAGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | GCAGCCTGTTGGCTGACAGGCTCAGTGTGGTCACATTaGCCGGGAAGCCCGGTGGCACACCCTCTAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AACWLTGSVWSH*PGSPVAHPLGH Trigger: GTGACCTAGAGGGTGTGCCACCGGGCTTCCCGGCCAATGTGACCACACTGAGCCTGTCAGCCAACAGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
||
| CDS CCA 72 bp | TGGAGCTGGGGGACTGGCTGTCCATCCACGTCACAGTaGAGTGCCAGCACGAAGCCAGGCCGTAGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSWGTGCPSTSQ*SASTKPGRSSA Trigger: AGCAGAGCTACGGCCTGGCTTCGTGCTGGCACTCCACTGTGACGTGGATGGACAGCCAGTCCCCCAGCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | GCCCGGGGTGTGAATGTGCCAATGGAGCTGGGGGACTaGCTGTCCATCCACGTCACAGTGGAGTGCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARGVNVPMELGD*LSIHVTVECQH Trigger: GTGCTGGCACTCCACTGTGACGTGGATGGACAGCCAGTCCCCCAGCTCCATTGGCACATTCACACCCCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 72 bp | AAGTATGCCAGAGAACTGCTGCGCAGGCCTCCCGTCTaGTGCTATTGCAGCTTCTGGGGGCCCAGCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KYARELLRRPPV*CYCSFWGPSTA Trigger: AGCCGTGCTGGGCCCCCAGAAGCTGCAATAGCAGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCATACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | CAGGTGCAGTCGAAAGGGTTGTCATTGATCTGCAAGTaGGACAGCGCGGTGAGCGGTGCGAAGGTGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QVQSKGLSLICK*DSAVSGAKVPS Trigger: CGAGGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | GCACGAAGCCAGGCCGTAGCTCTGCTCCATCTTGGCTaGGCTGGTAGCTTAGTTGCACTGAGGGAGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSQAVALLHLG*AGSLVALRELS Trigger: GCTCAGCTCCCTCAGTGCAACTAAGCTACCAGCCCAGCCAAGATGGAGCAGAGCTACGGCCTGGCTTCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CAA 72 bp | CACACGATGCCACAGGTGCAGTCGAAAGGGTTGTCATaGATCTGCAAGTGGGACAGCGCGGTGAGCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HTMPQVQSKGLS*ICKWDSAVSGA Trigger: CGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CAA 90 bp | GTCTTGAACCACACGATGCCACAGGTGCAGTCGAAAGGGTTGTCATaGATCTGCAAGTGGGACAGCGCGGTGAGCGGTGCGAAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLNHTMPQVQSKGLS*ICKWDSAVSGAKVP Trigger: GGGCACCTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTGGTTCAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CAA 90 bp | GCCCATGTCTTGAACCACACGATGCCACAGGTGCAGTCGAAAGGGTaGTCATTGATCTGCAAGTGGGACAGCGCGGTGAGCGGTGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AHVLNHTMPQVQSKG*SLICKWDSAVSGAK Trigger: CTTCGCACCGCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTGGTTCAAGACATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 72 bp | TGTCAACCGTATAGCAGCCCTTGCCCTCCACTGCTTTaGCATGGAACTTGTGCCCCACAGCATCCTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CQPYSSPCPPLL*HGTCAPQHPLP Trigger: GGGGAGAGGATGCTGTGGGGCACAAGTTCCATGGCAAAGCAGTGGAGGGCAAGGGCTGCTATACGGTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS GCA 72 bp | AGGAGAGAACAAGCAGGCTTTGGCCTAGCAGAAGTATaGCAGAGAACTGCTGCGCAGGCCTCCCGTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RREQAGFGLAEV*QRTAAQASRLL Trigger: CAGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCATACTTCTGCTAGGCCAAAGCCTGCTTGTTCTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
||
| CDS CCA 72 bp | CTGGAAGCCATACTTCTCCCCACAGTCACAGGGCTCTaGACAAGCTCGCACCAGGTTCAGGAGAACAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LEAILLPTVTGL*TSSHQVQENSP Trigger: TGGGCTGTTCTCCTGAACCTGGTGCGAGCTTGTCCAGAGCCCTGTGACTGTGGGGAGAAGTATGGCTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 ENSMUST00000217578.2 |
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| CDS CCA 72 bp | GGTGGCAGGCGGCCTAGTGGGATACCCTTCAGGACGTaGGGTGTAGTACAGGCAATGTTGTCCTGTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGRRPSGIPFRT*GVVQAMLSCSG Trigger: TCCAGAACAGGACAACATTGCCTGTACTACACCCCACGTCCTGAAGGGTATCCCACTAGGCCGCCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CAA 72 bp | TCTGGAATAGACACCGCTGAGGCCAGGGCCCATGTCTaGAACCACACGATGCCACAGGTGCAGTCGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGIDTAEARAHV*NHTMPQVQSKG Trigger: CCCTTTCGACTGCACCTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGGCCTCAGCGGTGTCTATTCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CAA 90 bp | CCTAGTGGGATACCCTTCAGGACGTGGGGTGTAGTACAGGCAATGTaGTCCTGTTCTGGAATAGACACCGCTGAGGCCAGGGCCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: PSGIPFRTWGVVQAM*SCSGIDTAEARAHV Trigger: GACATGGGCCCTGGCCTCAGCGGTGTCTATTCCAGAACAGGACAACATTGCCTGTACTACACCCCACGTCCTGAAGGGTATCCCACTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS GCA 72 bp | GGGTGGCCAATGCCACATTTACAGAGCTTTCGGCACTaGCTAGCTCATTGGTGGCCAGGCAGCTATAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GWPMPHLQSFRH*LAHWWPGSYRC Trigger: GCACCTATAGCTGCCTGGCCACCAATGAGCTAGGCAGTGCCGAAAGCTCTGTAAATGTGGCATTGGCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS GCA 72 bp | AGGCTTTGGCCTAGCAGAAGTATGCCAGAGAACTGCTaGGCAGGCCTCCCGTCTGCTGCTATTGCAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RLWPSRSMPENC*AGLPSAAIAAS Trigger: AGAAGCTGCAATAGCAGCAGACGGGAGGCCTGCGCAGCAGTTCTCTGGCATACTTCTGCTAGGCCAAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CCA 72 bp | CCACATTTACAGAGCTTTCGGCACTGCCTAGCTCATTaGTGGCCAGGCAGCTATAGGTGCCCTCCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PHLQSFRHCLAH*WPGSYRCPPPA Trigger: AGCTGGAGGAGGGCACCTATAGCTGCCTGGCCACCAATGAGCTAGGCAGTGCCGAAAGCTCTGTAAATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS TCA 72 bp | ACAGGCAATGTTGTCCTGTTCTGGAATAGACACCGCTaGGGCCAGGGCCCATGTCTTGAACCACACGATGCC | + |
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Preference number: 6 (lower is better) Translates to: TGNVVLFWNRHR*GQGPCLEPHDA Trigger: GGCATCGTGTGGTTCAAGACATGGGCCCTGGCCTCAGCGGTGTCTATTCCAGAACAGGACAACATTGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CAA 72 bp | TTGAACCACACGATGCCACAGGTGCAGTCGAAAGGGTaGTCATTGATCTGCAAGTGGGACAGCGCGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LNHTMPQVQSKG*SLICKWDSAVS Trigger: GCTCACCGCGCTGTCCCACTTGCAGATCAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTGGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CAA 90 bp | TTGTCCTGTTCTGGAATAGACACCGCTGAGGCCAGGGCCCATGTCTaGAACCACACGATGCCACAGGTGCAGTCGAAAGGGTTGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: LSCSGIDTAEARAHV*NHTMPQVQSKGLSL Trigger: CAATGACAACCCTTTCGACTGCACCTGTGGCATCGTGTGGTTCAAGACATGGGCCCTGGCCTCAGCGGTGTCTATTCCAGAACAGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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| CDS CCA 72 bp | GAGGTAAATGATAACCACGTTGTCTTCCGGTCCGGATaGCTGTACCTCGTTGTCAACCGTATAGCAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: EVNDNHVVFRSG*LYLVVNRIAAL Trigger: AAGGGCTGCTATACGGTTGACAACGAGGTACAGCCATCCGGACCGGAAGACAACGTGGTTATCATTTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041477.15 ENSMUST00000168864.4 |
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