Pregenerated sensors for ISL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032318Ensembl transcript IDs: ENSMUST00000034869.11, ENSMUST00000114290.4, ENSMUST00000164373.8, ENSMUST00000175950.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCGACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATGGGGCTaGCTGCCACCAGAGGCGTCCCAGTCAGTCCCTGGAGGCTCGCCT | + |
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Preference number: 1 (lower is better) Translates to: PRLRCPAPRSHGGWG*LPPEASQSVPGGSP Trigger: AGGCGAGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114290.4 |
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| 3UTR GCA 90 bp | GACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATGGGGCTGCCTaGCACCAGAGGCGTCCCAGTCAGTCCCTGGAGGCTCTCACCGCC | + |
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Preference number: 1 (lower is better) Translates to: DCAALHRVLMADGAA*HQRRPSQSLEALTA Trigger: GGCGGTGAGAGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | GCTTTCCAGGGCGGCTGGTACGTCTGCACCTCGACTGCGCTGCCCTaGACCGCGTTCTCATGGCGGATGGGGCTGCCTGCCACCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: AFQGGWYVCTSTALP*TAFSWRMGLPATRG Trigger: GCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | CCTCGACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATGGGGCTaGCTGCCACCAGAGGCGTCCCAGTCAGTCCCTGGAGGCTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: PRLRCPAPRSHGGWG*LPPEASQSVPGGSH Trigger: GTGAGAGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164373.8 |
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| 3UTR CCA 90 bp | TCTGCACCTCGACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATaGGGCTGCCTGCCACCAGAGGCGTCCCAGTCAGTCCCTGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SAPRLRCPAPRSHGG*GCLPPEASQSVPGG Trigger: GCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | CTCGCTGAGTGCTTTCCAGGGCGGCTGGTACGTCTGCACCTCGACTaGGCTGCCCTGCACCGCGTTCTCATGGCGGATGGGGCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LAECFPGRLVRLHLD*AALHRVLMADGAAC Trigger: GCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CCA 90 bp | GAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTaGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTACC | + |
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Preference number: 1 (lower is better) Translates to: EHGCVSCREHARSAG*QGGVLAHVSTGLGT Trigger: GGTACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR TCA 90 bp | ACCCCATCAGATGGGTTCCCGGGCGAGCAAGGCGCAGAGAGACAGTaGCAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGCGGAGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: TPSDGFPGEQGAERQ*QFPTQRGRGEGGAN Trigger: GTTAGCTCCGCCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCGCCCGGGAACCCATCTGATGGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | TGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTACGTCTaGACCTCGACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATG | + |
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Preference number: 1 (lower is better) Translates to: WSANSLSAFQGGWYV*TSTALPCTAFSWRM Trigger: CATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | AAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTGAGTaGTTTCCAGGGCGGCTGGTACGTCTGCACCTCGACTGCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KGGLVQVALECKLAE*FPGRLVRLHLDCAA Trigger: GGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CCA 90 bp | AGGTCGCTCTGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTaGTACGTCTGCACCTCGACTGCGCTGCCCTGCACCGCGTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: RSLWSANSLSAFQGG*YVCTSTALPCTAFS Trigger: TGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR TCA 90 bp | GTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTaGGTGCTTTCCAGGGCGGCTGGTACGTCTGCACCTCGACTGCGC | + |
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Preference number: 1 (lower is better) Translates to: VERRVGPGRSGVQTR*VLSRAAGTSAPRLR Trigger: GCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | CTGCGCCCCAGCGCTGCTGGCCGTCCCGTCGCGGTCGCGTGCCTCTaGCCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LRPSAAGRPVAVACL*PLALNNNNNYKGRR Trigger: TCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | TGCAGGCTGCGCCCCAGCGCTGCTGGCCGTCCCGTCGCGGTCGCGTaGCTCTGCCCGCTCGCTTTAAATAACAACAATAATTACAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CRLRPSAAGRPVAVA*LCPLALNNNNNYKG Trigger: GCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | GTCTCCACCGGACTAGGTACCATACTGTTGGGGGTGTCCGGGAGCTaGGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTGCCTAGG | + |
|
Preference number: 1 (lower is better) Translates to: VSTGLGTILLGVSGS*EDREVTSLPEELPR Trigger: CCTAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACACCCCCAACAGTATGGTACCTAGTCCGGTGGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | GGAAACCAGCTGTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTaGAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTACGTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GNQLLKGGLVQVALE*KLAECFPGRLVRLH Trigger: GTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAGCTGGTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR GCA 90 bp | CCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTaGCTAGGGAGCCTGACTCGGAGAAGGAAACCAGCTGTTGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: PGAARTERSRRYRKS*LGSLTRRRKPAVER Trigger: CCTTTCAACAGCTGGTTTCCTTCTCCGAGTCAGGCTCCCTAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR TCA 90 bp | AACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGGAATGGCCTaGGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGG | + |
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Preference number: 1 (lower is better) Translates to: NNNYKGRRFFRAGMA*AWVRLMQGACEVRG Trigger: CCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CCA 90 bp | ATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGGAATaGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: ITTIITRAGDFSELE*PEHGCVSCREHARS Trigger: GGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CCA 90 bp | TTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTaGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTCCTCGCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LKDSLVSTLSGSHAL*GLCLFLGIVPSSLP Trigger: TGGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCTGCGCCCCAGCGCTGCTGGCCGTCCCGTCGCGGTCGCGTGCCTCTGCCCGTCTGCACCTCGACTaGGCTGCCCTGCACCGCGTT | + |
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Preference number: 2 (lower is better) Translates to: AGCAPALLAVPSRSRASARLHLD*AALHRV Trigger: AACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACG...GGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCGCGGATGGGGCTGCCTaGCACCAGAGGCGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GLSMGASHAGSMRGPRAGADGAA*HQRRPS Trigger: ACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGC...GCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGCTCAGCGGTGCAGGCTaGGCCCCAGCGCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: SKAQRDSDSSPRSEGEARLSGAG*APALLA Trigger: GGCCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAG...CCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTTCGGAGCGAGGTCCGCGGGCTaGCAGGGAGGGGTCCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: VLAARSRTKPRVSAGEFGARSAG*QGGVLA Trigger: AGCGAGGACCCCTCCCTGCCAGCCCGCGGACCTCGC...TCCGAACTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTACCATACTGTTGGGGGTGCTCAGCGGTGCAGGCTaGGCCCCAGCGCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GGVLAHVSTGLGTILLGVLSGAG*APALLA Trigger: GGCCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAG...CACCCCCAACAGTATGGTACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGGCGGATGGGGCTGCCTaGCACCAGAGGCGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ARRRETVTVPHAARERRGADGAA*HQRRPS Trigger: ACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGC...CCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCAGAGCTGGAATGGCCTaGGCATGGGTGCGTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: GLSMGASHAGSMRGPRAGRAGMA*AWVRLM Trigger: CATGAGACGCACCCATGCTCAGGCCATTCCAGCTCT...GCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGGGAGTGCAAACTCGCTaGGTGCTTTCCAGGGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRARRRETVTVPHAARERGVQTR*VLSRAA Trigger: AGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCC...CCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | GCGAGGTCCGCGGGCTGGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGACTATTTTCAGAGCTGGAATaGCCTGAGCATGGGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: ARSAGWQGGVLAHVSTGLFSELE*PEHGCV Trigger: GACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAA...TAGTCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCGGACCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAATGGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGCGTTCTCATGGCGGATaGGGCTGCCTGCCACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LEWPEHGCVSCREHARSARSHGG*GCLPPE Trigger: CTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACG...CGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CAA 90 bp | GGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTACCATACTGTaGGGGGTGTCCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTA | + |
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Preference number: 2 (lower is better) Translates to: GGVLAHVSTGLGTIL*GVSGSCEDREVTSL Trigger: TAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACACCCCCAACAGTATGGTACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGCATGGGTGCGTCTCATaGAGGGAGCATGCGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CSVLAARSRTKPRVSAGEHGCVS*REHARS Trigger: GGACCTCGCATGCTCCCTGCATGAGACGCACCCATG...CTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTACGTCTGCACTCGACTGCGCTGCCCTaGACCGCGTTCTCATGGCGG | + |
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Preference number: 2 (lower is better) Translates to: ALECKLAECFPGRLVRLHSTALP*TAFSWR Trigger: CCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGA...GTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | CATACTGTTGGGGGTGTCCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTACCCGTTCTCATGGCGGATaGGGCTGCCTGCCACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HTVGGVRELRGQRGHVATRSHGG*GCLPPE Trigger: CTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACG...GGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACACCCCCAACAGTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGAAGGAAACCAGCTGTTaGAAGGCGGGTTGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ARRRETVTVPHAARERRGKETSC*KAGWSR Trigger: CCTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTT...CCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTTCGGAGCAGGCTGGTCCAGGTCGCTCTaGAGTGCAAACTCGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: AARSRTKPRVSAGEFGAGWSRSL*SANSLS Trigger: ACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCA...GCCTGCTCCGAACTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCACGCAGCGAGGGAGAGGCGAGGGCGGAGCTAACCCAGAATGTCCCAAATAGAGCTGGAATGGCCTaGGCATGGGTGCGTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SPRSEGEARAELTQNVPNRAGMA*AWVRLM Trigger: CATGAGACGCACCCATGCTCAGGCCATTCCAGCTCT...ATTTGGGACATTCTGGGTTAGCTCCGCCCTCGCCTCTCCCTCGCTGCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTTCGGAGCAGGCTTTTCAGAGCTGGAATaGCCTGAGCATGGGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: AARSRTKPRVSAGEFGAGFSELE*PEHGCV Trigger: GACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAA...GCCTGCTCCGAACTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAATTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCCATGGGTGCGTCTCATaGAGGGAGCATGCGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LELFRPRCQVQNKASGQRHGCVS*REHARS Trigger: GGACCTCGCATGCTCCCTGCATGAGACGCACCCATG...GCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAATTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCACGCAGCGAGGGAGAGGCGAGGGCGGAGCTAACCCAGAATGTCCCAAATTGGTCCAGGTCGCTCTaGAGTGCAAACTCGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPRSEGEARAELTQNVPNWSRSL*SANSLS Trigger: ACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCA...ATTTGGGACATTCTGGGTTAGCTCCGCCCTCGCCTCTCCCTCGCTGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCTCACGTCTCCACCGGACTAGGTACCATACTGTTGGGGGTGTCCGGGAGCCAGGTCGCTCTGGAGTaGAAACTCGCTGAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LAHVSTGLGTILLGVSGSQVALE*KLAECF Trigger: AAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTG...GCTCCCGGACACCCCCAACAGTATGGTACCTAGTCCGGTGGAGACGTGAGCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGATTTTCAGAGCTGGAATaGCCTGAGCATGGGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: LFRPRCQVQNKASGQRRRFSELE*PEHGCV Trigger: GACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAA...TCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGCGAGGTCCGCGGGCTaGCAGGGAGGGGTCCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: HFLKDSLVSTLSGSHALWARSAG*QGGVLA Trigger: AGCGAGGACCCCTCCCTGCCAGCCCGCGGACCTCGC...CCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGGGCGGCTGGTACGTCTaGACCTCGACTGCGCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FLKDSLVSTLSGSHALWGGGWYV*TSTALP Trigger: GGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCC...CCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTATGCACCGCGTTCTCATaGCGGATGGGGCTGCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LKDSLVSTLSGSHALWGLCTAFS*RMGLPA Trigger: GGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCA...TAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTATGTCTGCTTTCCAGGGCGGCTaGTACGTCTGCACCTCGACT | + |
|
Preference number: 2 (lower is better) Translates to: RQSGFYSVRQSCALGVMSAFQGG*YVCTST Trigger: AGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGC...AGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGTGGCGCAGAGAGACAGTaGCAGTTCCCCACGCAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: YSVRQSCALGVMSVSWNCGAERQ*QFPTQR Trigger: TCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCC...ACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATTTATGCACCGCGTTCTCATaGCGGATGGGGCTGCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NLRLFGKGSHCPPSTDNLCTAFS*RMGLPA Trigger: GGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCA...TAAATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGCTTTCCAGGGCGGCTaGTACGTCTGCACCTCGACT | + |
|
Preference number: 2 (lower is better) Translates to: STLSGSHALWGLCLFLGIAFQGG*YVCTST Trigger: AGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGC...AATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGAAACCAGCTGTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTGCAAAGAGATTTTTCAGAGCTaGAATGGCCTGAGCATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EGNQLLKGGLVQVALECKEIFQS*NGLSMG Trigger: ACCCATGCTCAGGCCATTCCAGCTCTGAAAAATCTC...TTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CAA 90 bp | TTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTaGGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTCCTCGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: FKRQSGFYSVRQSCA*GVMSVSWNCSVLAA Trigger: GGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGGAGATTTTTCAGAGCTaGAATGGCCTGAGCATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: FLKDSLVSTLSGSHALWGEIFQS*NGLSMG Trigger: ACCCATGCTCAGGCCATTCCAGCTCTGAAAAATCTC...CCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTAAATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGGAATGCATGGGTGCGTCTCATaGAGGGAGCATGCGAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALNNNNNYKGRRFFRAGMHGCVS*REHARS Trigger: GGACCTCGCATGCTCCCTGCATGAGACGCACCCATG...CATTCCAGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTAAATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGGAATGAGAGCTGGAATGGCCTaGGCATGGGTGCGTCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: ALNNNNNYKGRRFFRAGMRAGMA*AWVRLM Trigger: CATGAGACGCACCCATGCTCAGGCCATTCCAGCTCT...CATTCCAGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGTTATGTCTGTTTCTTaGAATTGTTCCGTCCTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: HFLKDSLVSTLSGSHALWVMSVS*NCSVLA Trigger: AGCGAGGACGGAACAATTCCAAGAAACAGACATAAC...CCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CAA 90 bp | ATTCGTCCCACTATTCGCCTCACAATAAATAACAATAACTTACGTTaGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: IRPTIRLTINNNNLR*FGKGSHCPPSTDNL Trigger: TAAATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGTTATTTATTGTGAGGCGAATAGTGGGACGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CCA 72 bp | CCAGTCTCAGCGGTGCAGGCTGCGCCCCAGCGCTGCTaGCCGTCCCGTCGCGGTCGCGTGCCTCTGCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: PVSAVQAAPQRC*PSRRGRVPLPA Trigger: AGCGGGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAGACTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | TCTCCAGTCTCAGCGGTGCAGGCTGCGCCCCAGCGCTaGTGGCCGTCCCGTCGCGGTCGCGTGCCTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPVSAVQAAPQR*WPSRRGRVPLP Trigger: GGGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAGACTGGAGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | CTTGGAGCCGGAGTCTCCAGTCTCAGCGGTGCAGGCTaGGCCCCAGCGCTGCTGGCCGTCCCGTCGCGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LGAGVSSLSGAG*APALLAVPSRS Trigger: CGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAGACTGGAGACTCCGGCTCCAAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | GGCGGCTGGTACGTCTGCACCTCGACTGCGCTGCCCTaGACCGCGTTCTCATGGCGGATGGGGCTGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGWYVCTSTALP*TAFSWRMGLPA Trigger: GGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | GCCCTGCACCGCGTTCTCATGGCGGATGGGGCTGCCTaGCACCAGAGGCGTCCCAGTCAGTCCCTGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALHRVLMADGAA*HQRRPSQSLEA Trigger: AGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | CGCTGCCCTGCACCGCGTTCTCATGGCGGATGGGGCTaGCTGCCACCAGAGGCGTCCCAGTCAGTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RCPAPRSHGGWG*LPPEASQSVPG Trigger: TCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | TCCAGGGCGGCTGGTACGTCTGCACCTCGACTGCGCTaGCCTGCACCGCGTTCTCATGGCGGATGGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRAAGTSAPRLR*PAPRSHGGWGC Trigger: GCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CCA 72 bp | CGACTGCGCTGCCCTGCACCGCGTTCTCATGGCGGATaGGGCTGCCTGCCACCAGAGGCGTCCCAGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RLRCPAPRSHGG*GCLPPEASQSV Trigger: GACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CCA 72 bp | TGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTaGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: CVSCREHARSAG*QGGVLAHVSTG Trigger: TCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGCGGGCTGGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTACCTGTTGAAAGGCGGGTaGGTCCAGGTCGCTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRGLAGRGPRSRLHRTRYLLKGG*VQVALE Trigger: CTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAG...GTACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | TGCTTTCCAGGGCGGCTGGTACGTCTGCACCTCGACTaGGCTGCCCTGCACCGCGTTCTCATGGCGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: CFPGRLVRLHLD*AALHRVLMADG Trigger: CCCATCCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CCA 72 bp | TGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTaGTACGTCTGCACCTCGACTGCGCTGCCCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: WSANSLSAFQGG*YVCTSTALPCT Trigger: GGTGCAGGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTTCGGACTAGGTACCATACTGTaGGGGGTGTCCGGGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLAARSRTKPRVSAGEFGLGTIL*GVSGSC Trigger: GCAGCTCCCGGACACCCCCAACAGTATGGTACCTAG...TCCGAACTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTCACGTCTCCACCGGACTAGGTACCATACTGTTGGGGGTGTCCGGGAGCTGTCGCTACCGGAAGAGTaGCCTAGGGAGCCTGACTCG | + |
|
Preference number: 3 (lower is better) Translates to: RSRLHRTRYHTVGGVRELSLPEE*PREPDS Trigger: CGAGTCAGGCTCCCTAGGCAACTCTTCCGGTAGCGA...CAGCTCCCGGACACCCCCAACAGTATGGTACCTAGTCCGGTGGAGACGTGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR TCA 72 bp | CGGGTTGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTaGGTGCTTTCCAGGGCGGCTGGTACGTCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: RVGPGRSGVQTR*VLSRAAGTSAP Trigger: AGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGAAGGAAACCAGCTGTaGAAAGGCGGGTTGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RARRRETVTVPHAARERREGNQL*KGGLVQ Trigger: CTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTTC...TCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | TTGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTGAGTaGTTTCCAGGGCGGCTGGTACGTCTGCACCTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: LVQVALECKLAE*FPGRLVRLHLD Trigger: GTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | CTGTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTaGAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLKGGLVQVALE*KLAECFPGRLV Trigger: TACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | GCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTaGCTAGGGAGCCTGACTCGGAGAAGGAAACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARTERSRRYRKS*LGSLTRRRKPA Trigger: AGCTGGTTTCCTTCTCCGAGTCAGGCTCCCTAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | AGCGCTGCTGGCCGTCCCGTCGCGGTCGCGTGCCTCTaGCCGCTCGCTTTAAATAACAACAATAATTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAAGRPVAVACL*PLALNNNNNYK Trigger: CTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGGTCGCGTGCCTCTGCCCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCTGTTGAAAGGCGGGTaGGTCCAGGTCGCTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVACLCPLALNNNNNYKGLLKGG*VQVALE Trigger: CTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAG...GCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CCA 72 bp | CGGCAGTCATGCGCTTTGGGGGTTATGTCTGTTTCTTaGAATTGTTCCGTCCTCGCTGCCAGGTCCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: RQSCALGVMSVS*NCSVLAARSRT Trigger: TGTTCTGGACCTGGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR GCA 72 bp | AAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATaGGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: KRQSGFYSVRQS*ALGVMSVSWNC Trigger: ACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTGCGCCCCAGCGCTGCTGGCCGTCCCGTCGCGGTCGCGTGCCTCTGCCCGCAGCCCACGCACATaGCCGTCCCGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCAPALLAVPSRSRASARSPRT*PSRASS Trigger: AGAAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCG...GGCAGAGGCACGCGACCGCGACGGGACGGCCAGCAGCGCTGGGGCGCAGCCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCGGCGGCTGGTACGTCTaGACCTCGACTGCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSMGASHAGSMRGPRAGGGWYV*TSTALP Trigger: GGGCAGCGCAGTCGAGGTGCAGACGTACCAGCCGCC...GCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | GGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCAACTGGTCGTGGATCTaGCTCCCGCAGCCCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSMGASHAGSMRGPRAGNWSWI*LPQPTH Trigger: GTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGTT...GCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGCGTTGAGGCAGGCGGCGTaGCACTCGAGGTCGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KAQRDSDSSPRSEGEARALRQAA*HSRSGD Trigger: GTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAA...CGCCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCAGTCGACTGCGCTGCCCTaGACCGCGTTCTCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PEHGCVSCREHARSAGWQSTALP*TAFSWR Trigger: CCGCCATGAGAACGCGGTGCAGGGCAGCGCAGTCGA...CTGCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR GCA 90 bp | TGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGGGAGCAGCTGGCGGCTaGACACGGAGCAGCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVLAARSRTKPRVSAGEGAAGG*TRSSGS Trigger: GCTTCCGCTGCTCCGTGTGCAGCCGCCAGCTGCTCC...CTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | AGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGCGGCGTTCTCATGGCGGATaGGGCTGCCTGCCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRETVTVPHAARERRGRRSHGG*GCLPPE Trigger: CTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACG...CCGCCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | TCCCCACGCAGCGAGGGAGAGGCGAGGGCGGAGCTAACCCAGAATGTCCCAAATGAAACCACACGCGGATaGCCCGCGGGCTCAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRSEGEARAELTQNVPNETTRG*PAGSSR Trigger: CCGGCTTGAGCCCGCGGGTCATCCGCGTGTGGTTTC...ATTTGGGACATTCTGGGTTAGCTCCGCCCTCGCCTCTCCCTCGCTGCGTGGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTTGAGGCAGGCGGCGTaGCACTCGAGGTCGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSRSLWSANSLSAFQGGWLRQAA*HSRSGD Trigger: GTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAA...CCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | CGCGGGCTGGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTACCATGTTGTCTTCTCCGCCTaGTTGTGCACGTGCGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLAGRGPRSRLHRTRYHVVFSA*LCTCVR Trigger: GCGCACGCACGTGCACAAGCAGGCGGAGAAGACAAC...ATGGTACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGCGGATGGGGCTGCCTaGCACCAGAGGCGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFRPRCQVQNKASGQRRRADGAA*HQRRPS Trigger: ACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGC...TCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGAGCCGGAGTCTCCAGTCTCAGCGGTGCAGGCTGCGCCCCAGCGCTGCCTGCTGAAGCCCACCTaGCACTGGGCACACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLEPESPVSAVQAAPQRCLLKPT*HWAHLM Trigger: CATCAAGTGTGCCCAGTGCCAGGTGGGCTTCAGCAG...GCAGCGCTGGGGCGCAGCCTGCACCGCTGAGACTGGAGACTCCGGCTCCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR CCA 90 bp | CTCGCTCACGTCTCCACCGGACTAGGTACCATACTGTTGGGGGTGTCCGGGAGCCGCAGCCCACGCACATaGCCGTCCCGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAHVSTGLGTILLGVSGSRSPRT*PSRASS Trigger: AGAAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCG...GCTCCCGGACACCCCCAACAGTATGGTACCTAGTCCGGTGGAGACGTGAGCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR CCA 90 bp | GGGCGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGGTCTCGTCCAGGTACTaGCTGCACTCCGCGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRARRRETVTVPHAARERVSSRY*LHSAHL Trigger: CAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGAC...CCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR TCA 90 bp | TTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAAACTGGTCGTGGATCTaGCTCCCGCAGCCCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFRPRCQVQNKASGQRRRNWSWI*LPQPTH Trigger: GTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGTT...TCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGCGGCTCTCACGAAGCACGTaGACGTCTCGTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RRRETVTVPHAARERRGRLSRST*TSRPGT Trigger: AGTACCTGGACGAGACGTGCACGTGCTTCGTGAGAG...CCGCCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGAAGCCCACCTGGCACTaGGCACACTTGATGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARRRETVTVPHAARERRGKPTWH*AHLMPN Trigger: GTTCGGCATCAAGTGTGCCCAGTGCCAGGTGGGCTT...CCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | CGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGCTTTCCAGGGCGGCTaGTACGTCTGCACCTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: RARRRETVTVPHAARERRAFQGG*YVCTST Trigger: AGTCGAGGTGCAGACGTACCAGCCGCCCTGGAAAGC...TCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | GTGTCCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTGCCTCTAGCTGCTCTTTCATaGGCGCGTCTGGCCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGSCEDREVTSLPEELPLAALS*ARLAAD Trigger: ATCCGCGGCCAGACGCGCTCATGAAAGAGCAGCTAG...AGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGGAGTGCAAACTCGCTaGGTGCTTTCCAGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFRPRCQVQNKASGQRRRGVQTR*VLSRAA Trigger: AGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCC...TCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR GCA 90 bp | GTGTCCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTGCCTGTTGTCTTCTCCGCCTaGTTGTGCACGTGCGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGSCEDREVTSLPEELPVVFSA*LCTCVR Trigger: GCGCACGCACGTGCACAAGCAGGCGGAGAAGACAAC...AGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGCAAACTCGCTGAGTGCTTTCCAGGGCGGCTGGTACGTCTGCACCTCGCTAGCTGCTCTTTCATaGGCGCGTCTGGCCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSANSLSAFQGGWYVCTSLAALS*ARLAAD Trigger: ATCCGCGGCCAGACGCGCTCATGAAAGAGCAGCTAG...CGAGGTGCAGACGTACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCACTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAATTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGGAAACCACACGCGGATaGCCCGCGGGCTCAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLELFRPRCQVQNKASGQETTRG*PAGSSR Trigger: CCGGCTTGAGCCCGCGGGTCATCCGCGTGTGGTTTC...CTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAATTCCAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTGCAAACTCGCTGAGTaGTTTCCAGGGCGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSVLAARSRTKPRVSAGECKLAE*FPGRLV Trigger: TACCAGCCGCCCTGGAAAGCACTCAGCGAGTTTGCA...CTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR GCA 90 bp | GCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGGGCAGGTCGCTCTGGAGTaGAAACTCGCTGAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARRRETVTVPHAARERRGQVALE*KLAECF Trigger: AAAGCACTCAGCGAGTTTGCACTCCAGAGCGACCTG...CCCTCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR CCA 90 bp | ATTTTTCAGAGCTGGAATGGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGTCCGGACCCAGCGTCTaGCAGATGCAGGCCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFQSWNGLSMGASHAGSMSGPSV*QMQAAG Trigger: GCCCGCGGCCTGCATCTGCCAGACGCTGGGTCCGGA...CATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | GGAATTGTTCCGTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGTCCCAGTCAGTCCCTaGAGGCTCGCCTTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GIVPSSLPGPEQSLGSAQVPVSP*RLALSL Trigger: CAGTGACAAGGCGAGCCTCCAGGGACTGACTGGGAC...CTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGACGGAACAATTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | GTCCTCGCTGCCAGGTCCAGAACAAAGCCTCGGGTCAGCGCAGGCGAGTTCGGATGGTCCAGGTCGCTCTaGAGTGCAAACTCGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLAARSRTKPRVSAGEFGWSRSL*SANSLS Trigger: ACTCAGCGAGTTTGCACTCCAGAGCGACCTGGACCA...TCCGAACTCGCCTGCGCTGACCCGAGGCTTTGTTCTGGACCTGGCAGCGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | CGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGATTGCAACGCTTGTTCTaGAACCACACGCGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RARRRETVTVPHAARERRLQRLF*NHTRMT Trigger: GGTCATCCGCGTGTGGTTTCAGAACAAGCGTTGCAA...TCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR GCA 90 bp | ATTTTTCAGAGCTGGAATGGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGTTGAGGCAGGCGGCGTaGCACTCGAGGTCGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFQSWNGLSMGASHAGSMLRQAA*HSRSGD Trigger: GTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAA...CATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CAA 72 bp | TGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTaGCCTAGGGAGCCTGACTCGGAGAAGGAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEDREVTSLPEE*PREPDSEKETS Trigger: GCTGGTTTCCTTCTCCGAGTCAGGCTCCCTAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR TCA 90 bp | GCTGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTGCCTAGGGAGCCTGTTGCAACGCTTGTTCTaGAACCACACGCGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: AARTERSRRYRKSCLGSLLQRLF*NHTRMT Trigger: GGTCATCCGCGTGTGGTTTCAGAACAAGCGTTGCAA...CAGGCTCCCTAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR GCA 90 bp | TGTCCGGGAGCTGCGAGGACAGAGAGGTCACGTCGCTACCGGAAGAGTTGCCTACTCTCACGAAGCACGTaGACGTCTCGTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CPGAARTERSRRYRKSCLLSRST*TSRPGT Trigger: AGTACCTGGACGAGACGTGCACGTGCTTCGTGAGAG...TAGGCAACTCTTCCGGTAGCGACGTGACCTCTCTGTCCTCGCAGCTCCCGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR GCA 90 bp | ATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTCCTCGCTGCCAGCATGGCGGATGGGGCTaGCTGCCACCAGAGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MRFGGYVCFLELFRPRCQHGGWG*LPPEAS Trigger: GGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATG...CTGGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR CCA 90 bp | AGTTGCCTAGGGAGCCTGACTCGGAGAAGGAAACCAGCTGTTGAAAGGCGGGTTGTCTCGTCCAGGTACTaGCTGCACTCCGCGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLGSLTRRRKPAVERRVVSSRY*LHSAHL Trigger: CAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGAC...AACCCGCCTTTCAACAGCTGGTTTCCTTCTCCGAGTCAGGCTCCCTAGGCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR CCA 90 bp | ATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTCCTCGCTGCCAGTCTCCAGGGAGCAGCTaGCGGCTGCACACGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MRFGGYVCFLELFRPRCQSPGSS*RLHTEQ Trigger: CTGCTCCGTGTGCAGCCGCCAGCTGCTCCCTGGAGA...CTGGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | TTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTAGAAACCACACGCGGATaGCCCGCGGGCTCAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDSLVSTLSGSHALWGLETTRG*PAGSSR Trigger: CCGGCTTGAGCCCGCGGGTCATCCGCGTGTGGTTTC...TAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR TCA 90 bp | CGAGCAAGGCGCAGAGAGACAGTGACAGTTCCCCACGCAGCGAGGGAGAGGCGAGCTGTAGCTGCTTCATaGGAATGGACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RARRRETVTVPHAARERRAVAAS*EWTSSC Trigger: ACAAGAAGAAGTCCATTCTCATGAAGCAGCTACAGC...TCGCCTCTCCCTCGCTGCGTGGGGAACTGTCACTGTCTCTCTGCGCCTTGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCAGAGCTGGAATGGCCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGGTTGTCTTCTCCGCCTaGTTGTGCACGTGCGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFQSWNGLSMGASHAGSMVVFSA*LCTCVR Trigger: GCGCACGCACGTGCACAAGCAGGCGGAGAAGACAAC...CATGCTCCCTGCATGAGACGCACCCATGCTCAGGCCATTCCAGCTCTGAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR CCA 90 bp | GCGTGCCTCTGCCCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCGGAGATCCAGCAGGAGGCCGTaGTCAGCTCGGCAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLCPLALNNNNNYKGRRSSRRP*SARQSS Trigger: GCTGCTCTGCCGAGCTGACCACGGCCTCCTGCTGGA...TCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR TCA 90 bp | AAACCAGCTGTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTGCAAACTCGCTTGCAACGCTTGTTCTaGAACCACACGCGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPAVERRVGPGRSGVQTRLQRLF*NHTRMT Trigger: GGTCATCCGCGTGTGGTTTCAGAACAAGCGTTGCAA...GCGAGTTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAGCTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGGGGTGCACCGCGTTCTCATaGCGGATGGGGCTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKDSLVSTLSGSHALWGCTAFS*RMGLPA Trigger: GGCAGGCAGCCCCATCCGCCATGAGAACGCGGTGCA...CCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR GCA 90 bp | ATAACAATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGCGTCTGCACCTCGACTaGGCTGCCCTGCACCGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITITYVCSAKALTVLRRLRLHLD*AALHRV Trigger: AACGCGGTGCAGGGCAGCGCAGTCGAGGTGCAGACG...CAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | AACAATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATCGCAGCCCACGCACATaGCCGTCCCGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNNLRLFGKGSHCPPSTDRSPRT*PSRASS Trigger: AGAAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCG...ATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTGTCCGGCAGTCATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGTCTAGCTGCTCTTTCATaGGCGCGTCTGGCCGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSVRQSCALGVMSVSWNCLAALS*ARLAAD Trigger: ATCCGCGGCCAGACGCGCTCATGAAAGAGCAGCTAG...ACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | GCGGTCGCGTGCCTCTGCCCGCTCGCTTTAAATAACAACAATAATTACAAGGGCAAGGAAACCAGCTGTTaGAAGGCGGGTTGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVACLCPLALNNNNNYKGKETSC*KAGWSR Trigger: CCTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTT...GCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR GCA 90 bp | AACAATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATCGGCAGAGCAGCTCATaGTCCCGCAGCGAGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: NNNLRLFGKGSHCPPSTDRQSSS*SRSENS Trigger: CGAGTTCTCGCTGCGGGAGCATGAGCTGCTCTGCCG...ATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CCA 90 bp | CACTTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGCGGAAGCACTCGATGTaGTACACGCTGTCCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLKDSLVSTLSGSHALWRKHSM*YTLSRA Trigger: GGCGCGGGACAGCGTGTACCACATCGAGTGCTTCCG...CCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR TCA 90 bp | GCGGTCGCGTGCCTCTGCCCGCTCGCTTTAAATAACAACAATAATTACAAGGGCGGCTTCTTCTTGGAATaGTCCCCCATAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVACLCPLALNNNNNYKGGFFLE*SPIAPR Trigger: TCTGGGTGCTATGGGGGATCATTCCAAGAAGAAGCC...GCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGGGCAGAGGCACGCGACCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAACCAGCTGTTGAAAGGCGGGTTGGTCCAGGTCGCTCTGGAGTGCAAAGTCATCTCTACTAGCTaGTCTTTCATGAGCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGNQLLKGGLVQVALECKVISTS*SFMSAS Trigger: AGACGCGCTCATGAAAGAGCAGCTAGTAGAGATGAC...TTTGCACTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAGTTGCCTAGGGAGCCTGACTCGGAGAAGGAAACCAGCTGTTGAAAGGGCTGTAGCTGCTTCATaGGAATGGACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKSCLGSLTRRRKPAVERAVAAS*EWTSSC Trigger: ACAAGAAGAAGTCCATTCTCATGAAGCAGCTACAGC...CCTTTCAACAGCTGGTTTCCTTCTCCGAGTCAGGCTCCCTAGGCAACTCTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| 3UTR CAA 72 bp | CAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTaGGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSGFYSVRQSCA*GVMSVSWNCSV Trigger: GACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | ACAATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAGGCTTCTTCTTGGAATaGTCCCCCATAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TITYVCSAKALTVLRRLIGFFLE*SPIAPR Trigger: TCTGGGTGCTATGGGGGATCATTCCAAGAAGAAGCC...TATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | AATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATGGCTTCTTCTTGGAATaGTCCCCCATAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNLRLFGKGSHCPPSTDNGFFLE*SPIAPR Trigger: TCTGGGTGCTATGGGGGATCATTCCAAGAAGAAGCC...ATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR GCA 90 bp | AACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATTTAGTCATCTCTACTAGCTaGTCTTTCATGAGCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRLFGKGSHCPPSTDNLVISTS*SFMSAS Trigger: AGACGCGCTCATGAAAGAGCAGCTAGTAGAGATGAC...TAAATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR GCA 90 bp | ATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATTGTCATCTCTACTAGCTaGTCTTTCATGAGCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITYVCSAKALTVLRRLIIVISTS*SFMSAS Trigger: AGACGCGCTCATGAAAGAGCAGCTAGTAGAGATGAC...AATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| 3UTR CAA 72 bp | ACTATTCGCCTCACAATAAATAACAATAACTTACGTTaGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: TIRLTINNNNLR*FGKGSHCPPST Trigger: AGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTATTGTTATTTATTGTGAGGCGAATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR TCA 90 bp | CCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGCTGTAGCTGCTTCATaGGAATGGACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLALNNNNNYKGRRFFRAAVAAS*EWTSSC Trigger: ACAAGAAGAAGTCCATTCTCATGAAGCAGCTACAGC...AGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS TCA 90 bp | AGCACGTGCACGTCTCGTCCAGGTACTGGCTGCACTCCGCGCACTTaGGGCAGGCGGCGTGCCACTCGAGGTCGGGCGACACGCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: STCTSRPGTGCTPRT*GRRRATRGRATREG Trigger: TCCTTCGCGTGTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGTGCACGTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS TCA 90 bp | TACCCGGGTTGTCTTCTCCGCCTGCTTGTGCACGTGCGTGCGCAGTaGGGGCTGTCGTCCGGACCCAGCGTCTGGCAGATGCAGGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YPGCLLRLLVHVRAQ*GLSSGPSVWQMQAA Trigger: CGCGGCCTGCATCTGCCAGACGCTGGGTCCGGACGACAGCCCTCACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGACAACCCGGGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CAA 90 bp | AGGTCCGCGGGCTGGCAGGGAGGGGTCCTCGCTCACGTCTCCACCGGACTAGGTGTCTTCTCCGCCTGCTaGTGCACGTGCGTGCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSAGWQGGVLAHVSTGLGVFSAC*CTCVRS Trigger: ACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGAC...ACCTAGTCCGGTGGAGACGTGAGCGAGGACCCCTCCCTGCCAGCCCGCGGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCCGGAGTCTCCAGTCTCAGCGGTGCAGGCTGCGCCCCAGCGCTGCTGGTGGCACTGGGCACACTaGATGCCGAACAGCCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LEPESPVSAVQAAPQRCWWHWAH*MPNSLT Trigger: CGTCAGGCTGTTCGGCATCAAGTGTGCCCAGTGCCA...CCAGCAGCGCTGGGGCGCAGCCTGCACCGCTGAGACTGGAGACTCCGGCTCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CAA 90 bp | CGCGTTCTCATGGCGGATGGGGCTGCCTGCCACCAGAGGCGTCCCAGTCAGTCCGTCTTCTCCGCCTGCTaGTGCACGTGCGTGCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLMADGAACHQRRPSQSVFSAC*CTCVRS Trigger: ACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGAC...GGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCATGAGAACGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS GCA 90 bp | TCGTCCAGGTACTGGCTGCACTCCGCGCACTTGAGGCAGGCGGCGTaGCACTCGAGGTCGGGCGACACGCGAAGGATAAACTGGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRYWLHSAHLRQAA*HSRSGDTRRINWSW Trigger: CCACGACCAGTTTATCCTTCGCGTGTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
||
| CDS GCA 90 bp | CAGTCCGTACCCGGGTTGTCTTCTCCGCCTGCTTGTGCACGTGCGTaGGCAGTGAGGGCTGTCGTCCGGACCCAGCGTCTGGCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSVPGLSSPPACARA*AVRAVVRTQRLADA Trigger: TGCATCTGCCAGACGCTGGGTCCGGACGACAGCCCTCACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGACAACCCGGGTACGGACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS TCA 90 bp | CACTCGAGGTCGGGCGACACGCGAAGGATAAACTGGTCGTGGATCTaGCTCCCGCAGCCCACGCACATGGCCGTCCCGGGCTTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSRSGDTRRINWSWI*LPQPTHMAVPGFSP Trigger: TGGAGAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGTTTATCCTTCGCGTGTCGCCCGACCTCGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175950.8 |
||
| CDS CCA 90 bp | GTTTTCCCGTCTCTCACGAAGCACGTGCACGTCTCGTCCAGGTACTaGCTGCACTCCGCGCACTTGAGGCAGGCGGCGTGCCACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFPSLTKHVHVSSRY*LHSAHLRQAACHSR Trigger: CCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGACGGGAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS CCA 90 bp | TGGCGGATGGGGCTGCCTGCCACCAGAGGCGTCCCAGTCAGTCCCTaGAGGCTCGCCTTGTCACTGTGTTGCTGCTGCTGTAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRMGLPATRGVPVSP*RLALSLCCCCCSCF Trigger: GAAGCAGCTACAGCAGCAGCAACACAGTGACAAGGCGAGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCCCATCCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS TCA 90 bp | CACTCGAGGTCGGGCGACACGCGAAGGATAAACTGGTCGTGGATCTaGCTCCCGCAGCCCACGCACATGGCCGTCCCGGGCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRSGDTRRINWSWI*LPQPTHMAVPGFFL Trigger: CAAGAAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGTTTATCCTTCGCGTGTCGCCCGACCTCGAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR CAA 90 bp | CCTGAGCATGGGTGCGTCTCATGCAGGGAGCATGCGAGGTCCGCGGGCTGGCAGGAAGGAAACCAGCTGTaGAAAGGCGGGTTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEHGCVSCREHARSAGWQEGNQL*KGGLVQ Trigger: CTGGACCAACCCGCCTTTCAACAGCTGGTTTCCTTC...CTGCCAGCCCGCGGACCTCGCATGCTCCCTGCATGAGACGCACCCATGCTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS GCA 90 bp | CCGCAGCCCACGCACATGGCCGTCCCGGGCTTCTCTCCATTTCTCTaGCGCTGTAAAACCATTTTCCAGGTCCCTGAGCATGGGTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPTHMAVPGFSPFL*RCKTIFQVPEHGSP Trigger: CGGAGACCCATGCTCAGGGACCTGGAAAATGGTTTTACAGCGGCAGAGAAATGGAGAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175950.8 |
||
| CDS-3UTR CAA 90 bp | ATGCGCTTTGGGGGTTATGTCTGTTTCTTGGAATTGTTCCGTCCTCGCTGCCAGCTAGGTACCATACTGTaGGGGGTGTCCGGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MRFGGYVCFLELFRPRCQLGTIL*GVSGSC Trigger: GCAGCTCCCGGACACCCCCAACAGTATGGTACCTAG...CTGGCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR CAA 90 bp | ATAACTTACGTTTGTTCGGCAAAGGCTCTCACTGTCCTCCGTCGACTGATAATTCTGTTGAAAGGCGGGTaGGTCCAGGTCGCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ITYVCSAKALTVLRRLIILLKGG*VQVALE Trigger: CTCCAGAGCGACCTGGACCAACCCGCCTTTCAACAG...AATTATCAGTCGACGGAGGACAGTGAGAGCCTTTGCCGAACAAACGTAAGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS-3UTR CAA 90 bp | CCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTGTCTTCTCCGCCTGCTaGTGCACGTGCGTGCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLALNNNNNYKGRRFFRAVFSAC*CTCVRS Trigger: ACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGAC...AGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS-3UTR CAA 90 bp | CCGCTCGCTTTAAATAACAACAATAATTACAAGGGCCGGAGATTTTTCAGAGCTTCGCTACCGGAAGAGTaGCCTAGGGAGCCTGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLALNNNNNYKGRRFFRASLPEE*PREPDS Trigger: CGAGTCAGGCTCCCTAGGCAACTCTTCCGGTAGCGA...AGCTCTGAAAAATCTCCGGCCCTTGTAATTATTGTTGTTATTTAAAGCGAGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS-3UTR CAA 90 bp | CACTTTTTAAAAGACAGTCTGGTTTCTACTCTGTCCGGCAGTCATGCGCTTTGGAGAATGGACTTCTTCTaGTCCTTGCAACGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLKDSLVSTLSGSHALWRMDFF*SLQRLF Trigger: GAACAAGCGTTGCAAGGACAAGAAGAAGTCCATTCT...CCAAAGCGCATGACTGCCGGACAGAGTAGAAACCAGACTGTCTTTTAAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
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| CDS CCA 72 bp | GGGCTGCCAGCCGCAGCGCGCTCCAGCAGGAGGCCGTaGTCAGCTCGGCAGAGCAGCTCATGCTCCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLPAAARSSRRP*SARQSSSCSRS Trigger: GCTGCGGGAGCATGAGCTGCTCTGCCGAGCTGACCACGGCCTCCTGCTGGAGCGCGCTGCGGCTGGCAGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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| CDS CAA 72 bp | CACGTCTCGTCCAGGTACTGGCTGCACTCCGCGCACTaGAGGCAGGCGGCGTGCCACTCGAGGTCGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: HVSSRYWLHSAH*RQAACHSRSGD Trigger: GTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS CAA 90 bp | AAGCACGTGCACGTCTCGTCCAGGTACTGGCTGCACTCCGCGCACTaGAGGCAGGCGGCGTGCCACTCGAGGTCGGGCGACACGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KHVHVSSRYWLHSAH*RQAACHSRSGDTRR Trigger: CCTTCGCGTGTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGTGCACGTGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS TCA 72 bp | ACGTCTCGTCCAGGTACTGGCTGCACTCCGCGCACTTaGGGCAGGCGGCGTGCCACTCGAGGTCGGGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: TSRPGTGCTPRT*GRRRATRGRAT Trigger: TGTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS GCA 72 bp | CGTACCCGGGTTGTCTTCTCCGCCTGCTTGTGCACGTaGGTGCGCAGTGAGGGCTGTCGTCCGGACCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRVVFSACLCT*VRSEGCRPDPA Trigger: CGCTGGGTCCGGACGACAGCCCTCACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGACAACCCGGGTACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS TCA 72 bp | TCGGGCGACACGCGAAGGATAAACTGGTCGTGGATCTaGCTCCCGCAGCCCACGCACATGGCCGTCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGDTRRINWSWI*LPQPTHMAVPG Trigger: GCCCGGGACGGCCATGTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGTTTATCCTTCGCGTGTCGCCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS GCA 72 bp | AGCAGGAGGCCGTGGTCAGCTCGGCAGAGCAGCTCATaGTCCCGCAGCGAGAACTCGTCTCCAGGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRPWSARQSSS*SRSENSSPGSS Trigger: GCTGCTCCCTGGAGACGAGTTCTCGCTGCGGGAGCATGAGCTGCTCTGCCGAGCTGACCACGGCCTCCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS TCA 72 bp | TGTCTTCTCCGCCTGCTTGTGCACGTGCGTGCGCAGTaGGGGCTGTCGTCCGGACCCAGCGTCTGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CLLRLLVHVRAQ*GLSSGPSVWQM Trigger: CATCTGCCAGACGCTGGGTCCGGACGACAGCCCTCACTGCGCACGCACGTGCACAAGCAGGCGGAGAAGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS GCA 72 bp | TACTGGCTGCACTCCGCGCACTTGAGGCAGGCGGCGTaGCACTCGAGGTCGGGCGACACGCGAAGGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: YWLHSAHLRQAA*HSRSGDTRRIN Trigger: GTTTATCCTTCGCGTGTCGCCCGACCTCGAGTGGCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
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| CDS CCA 72 bp | TCTCTCACGAAGCACGTGCACGTCTCGTCCAGGTACTaGCTGCACTCCGCGCACTTGAGGCAGGCGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLTKHVHVSSRY*LHSAHLRQAAC Trigger: GCACGCCGCCTGCCTCAAGTGCGCGGAGTGCAGCCAGTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 ENSMUST00000175950.8 |
||
| CDS CCA 72 bp | GGGCTGCCTGCCACCAGAGGCGTCCCAGTCAGTCCCTaGAGGCTCGCCTTGTCACTGTGTTGCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLPATRGVPVSP*RLALSLCCCCC Trigger: ACAGCAGCAGCAACACAGTGACAAGGCGAGCCTCCAGGGACTGACTGGGACGCCTCTGGTGGCAGGCAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS CCA 72 bp | ACTGGTCGTGGATCTGACTCCCGCAGCCCACGCACATaGCCGTCCCGGGCTTCTCTCCATTTCTCTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGRGSDSRSPRT*PSRASLHFSAA Trigger: AGCGGCAGAGAAATGGAGAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175950.8 |
||
| CDS CCA 72 bp | ACTGGTCGTGGATCTGACTCCCGCAGCCCACGCACATaGCCGTCCCGGGCTTCTTCTTGGAATGATCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRGSDSRSPRT*PSRASSWNDPP Trigger: TGGGGGATCATTCCAAGAAGAAGCCCGGGACGGCCATGTGCGTGGGCTGCGGGAGTCAGATCCACGACCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034869.11 ENSMUST00000114290.4 ENSMUST00000164373.8 |
||
| CDS GCA 72 bp | GTCAGTCCCTGGAGGCTCGCCTTGTCACTGTGTTGCTaGTGCTGTAGCTGCTTCATGAGAATGGACTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSPWRLALSLCC*CCSCFMRMDFF Trigger: GAAGAAGTCCATTCTCATGAAGCAGCTACAGCAGCAGCAACACAGTGACAAGGCGAGCCTCCAGGGACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
||
| CDS GCA 72 bp | AGTCCCTGGAGGCTCGCCTTGTCACTGTGTTGCTGCTaGTGTAGCTGCTTCATGAGAATGGACTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPWRLALSLCCC*CSCFMRMDFFL Trigger: CAAGAAGAAGTCCATTCTCATGAAGCAGCTACAGCAGCAGCAACACAGTGACAAGGCGAGCCTCCAGGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034869.11 |
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